ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf29l12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK120985:Os11g0706100 184 7e-47
2AK102439:Os11g0706100 184 7e-47
3AK102256:Os02g0260400 135 3e-32
4AK070611:Os11g0706100 129 2e-30
5Os02g0261800:Os02g0261800 29 4.6 
>AK120985:Os11g0706100 |
          Length = 127
 Score =  184 bits (467), Expect = 7e-47
 Identities = 83/99 (83%), Positives = 90/99 (90%)
 Frame = +2

Query: 140 GPYYNNKRRIPMVRVCCTADDDEEVNNMGVNMALSMLKFYKREISPLLPSSCRYVPTCSD 319
           G  Y NKRRIP +RV C AD++EEVN++GVN+ALSMLKFYKREISPLLPSSCRYVPTCS 
Sbjct: 21  GVPYQNKRRIPTMRVYCAADEEEEVNDLGVNVALSMLKFYKREISPLLPSSCRYVPTCSQ 80

Query: 320 YSMQAYKRYGVAKGTILTAWRLCRCNPLGGQGYDPPRWF 436
           YSMQAYK+YGVAKGTILTAWRLC CNPLGG GYDPPRWF
Sbjct: 81  YSMQAYKKYGVAKGTILTAWRLCHCNPLGGHGYDPPRWF 119
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>AK102439:Os11g0706100 |
          Length = 127

 Score =  184 bits (467), Expect = 7e-47
 Identities = 83/99 (83%), Positives = 90/99 (90%)
 Frame = +2

Query: 140 GPYYNNKRRIPMVRVCCTADDDEEVNNMGVNMALSMLKFYKREISPLLPSSCRYVPTCSD 319
           G  Y NKRRIP +RV C AD++EEVN++GVN+ALSMLKFYKREISPLLPSSCRYVPTCS 
Sbjct: 21  GVPYQNKRRIPTMRVYCAADEEEEVNDLGVNVALSMLKFYKREISPLLPSSCRYVPTCSQ 80

Query: 320 YSMQAYKRYGVAKGTILTAWRLCRCNPLGGQGYDPPRWF 436
           YSMQAYK+YGVAKGTILTAWRLC CNPLGG GYDPPRWF
Sbjct: 81  YSMQAYKKYGVAKGTILTAWRLCHCNPLGGHGYDPPRWF 119
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>AK102256:Os02g0260400 |
          Length = 110

 Score =  135 bits (341), Expect = 3e-32
 Identities = 66/99 (66%), Positives = 70/99 (70%)
 Frame = +2

Query: 140 GPYYNNKRRIPMVRVCCTADDDEEVNNMGVNMALSMLKFYKREISPLLPSSCRYVPTCSD 319
           G  Y NKRRI  +RV C AD+ E                    ISPLLPSSCRYVPTCS+
Sbjct: 24  GVPYQNKRRILTMRVYCAADEGE--------------------ISPLLPSSCRYVPTCSE 63

Query: 320 YSMQAYKRYGVAKGTILTAWRLCRCNPLGGQGYDPPRWF 436
           YSMQAYK+YGVAKGTILTAWRLCRCNPLGG GYDPPRWF
Sbjct: 64  YSMQAYKKYGVAKGTILTAWRLCRCNPLGGHGYDPPRWF 102
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>AK070611:Os11g0706100 |
          Length = 71

 Score =  129 bits (325), Expect = 2e-30
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +2

Query: 245 MLKFYKREISPLLPSSCRYVPTCSDYSMQAYKRYGVAKGTILTAWRLCRCNPLGGQGYDP 424
           MLKFYK+ ISPLLPSSCRYVPTCS YSMQAYK+YGVAKGTILTAWRLC CNPLGG GYDP
Sbjct: 1   MLKFYKK-ISPLLPSSCRYVPTCSQYSMQAYKKYGVAKGTILTAWRLCHCNPLGGHGYDP 59

Query: 425 PRWF 436
           PRWF
Sbjct: 60  PRWF 63
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>Os02g0261800:Os02g0261800 |
          Length = 493

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 281 LPSSCRYVPTCSDYSMQAYKRYGVAKGTILTAWRLCRCNPLGGQGYDP 424
           LPSS R +  C + SMQ+     ++  T LT   L  C  L   G+DP
Sbjct: 272 LPSSLRELSICRESSMQSMAL--LSNLTSLTHLTLLECEDLTVDGFDP 317


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 22,907,312
Number of extensions: 484185
Number of successful extensions: 1121
Number of sequences better than 10.0: 5
Number of HSP's gapped: 1120
Number of HSP's successfully gapped: 5
Length of query: 277
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 178
Effective length of database: 11,435,796
Effective search space: 2035571688
Effective search space used: 2035571688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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