>LOC_Os11g47930:12011.t04285:unspliced-genomic conserved hypothetical protein|
          Length = 2575
 Score =  116 bits (247), Expect(3) = 1e-36
 Identities = 44/47 (93%), Positives = 45/47 (95%)
 Frame = +2 / +1

                                                           
Query: 266  EISPLLPSSCRYVPTCSDYSMQAYKRYGVAKGTILTAWRLCRCNPLG 406
            EISPLLPSSCRYVPTCS YSMQAYK+YGVAKGTILTAWRLC CNPLG
Sbjct: 1690 EISPLLPSSCRYVPTCSQYSMQAYKKYGVAKGTILTAWRLCHCNPLG 1830



 Score = 42.3 bits (86), Expect(3) = 1e-36
 Identities = 16/20 (80%), Positives = 20/20 (100%)
 Frame = +2 / +2

                                
Query: 203  DEEVNNMGVNMALSMLKFYK 262
            +EEVN++GVN+ALSMLKFYK
Sbjct: 1511 EEEVNDLGVNVALSMLKFYK 1570



 Score = 33.6 bits (67), Expect(3) = 1e-36
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2 / +3

                       
Query: 404  GGQGYDPPRWF 436
            GG GYDPPRWF
Sbjct: 1932 GGHGYDPPRWF 1964



 Score = 94.1 bits (199), Expect(3) = 2e-31
 Identities = 41/47 (87%), Positives = 41/47 (87%)
 Frame = -2 / -3

                                                           
Query: 405  PRGLQRHRRHAVKIVPFATPYLLYACIE*SLHVGT*RQLEGSKGDIS 265
            PRGLQ HRR AVKIVPFATPY LYACIE  L VGT*RQLEGSKGDIS
Sbjct: 1829 PRGLQWHRRQAVKIVPFATPYFLYACIEYWLQVGT*RQLEGSKGDIS 1689



 Score = 44.1 bits (90), Expect(3) = 2e-31
 Identities = 19/42 (45%), Positives = 29/42 (69%)
 Frame = -1 / -1

                                                      
Query: 268  LSFVEF*HR*CHVDSHIVDFLIVVGSTADPHHRNPSLIVVVR 143
            L+FV+F*H *CH+DS ++DFL +  + A     + S IV++R
Sbjct: 1576 LTFVKF*HG*CHIDSQVIDFLFLKSNKAQNALISISSIVLLR 1451



 Score = 35.9 bits (72), Expect(3) = 2e-31
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = -1 / -3

                                  
Query: 469  QPSFLR*LFLPKPPWRIISLST 404
            +PS L *LFL KPPW II+++T
Sbjct: 1997 RPSLLW*LFLTKPPWGIITMTT 1932



 Score = 74.8 bits (157), Expect(3) = 1e-22
 Identities = 31/53 (58%), Positives = 41/53 (77%)
 Frame = +1 / +3

                                                                 
Query: 256  LQKRDITLTAFKLSLCANVQRLLYAGVQKIWCRERYNLDSMASVPL*SSWWTG 414
            + +R+I LT  KL LCAN+Q +LYA +QKI   + YNLDS+AS+PL*SSW+ G
Sbjct: 1680 VNRRNIALTTLKLPLCANLQPVLYASIQKIRRCKGYNLDSLASMPL*SSWYVG 1838



 Score = 39.1 bits (79), Expect(3) = 1e-22
 Identities = 14/19 (73%), Positives = 14/19 (73%)
 Frame = +3 / +3

                               
Query: 207  RKSTIWESTWHYRC*NSTK 263
            RKS  WES WHY C*N TK
Sbjct: 1515 RKSMTWESMWHYPC*NFTK 1571



 Score = 30.4 bits (60), Expect(3) = 1e-22
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +3 / +1

                             
Query: 417  MILQGGLGRKSYLRNDG 467
            MI QGGL RKSY  NDG
Sbjct: 1945 MIPQGGLVRKSYQSNDG 1995



 Score = 71.2 bits (149), Expect(4) = 1e-17
 Identities = 32/51 (62%), Positives = 36/51 (70%)
 Frame = -1 / -2

                                                               
Query: 415  SLSTKRITTAQTPCCQDCTFRDTISFVRLHRVIAARWHITTA*RQ*G*YLS 263
            +L TKRIT A TP CQDCT  + + FV LHRV+AA WHIT A*  *G Y S
Sbjct: 1839 NLHTKRITMA*TPSCQDCTLCNAVFFVCLHRVLAASWHITAA*G**GRYFS 1687



 Score = 29.9 bits (59), Expect(4) = 1e-17
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = -2 / -2

                              
Query: 264  LL*NFSIDSAMLTPILLT 211
            LL*NFS+DSA LTP  LT
Sbjct: 1572 LL*NFSMDSATLTPKSLT 1519



 Score = 27.2 bits (53), Expect(4) = 1e-17
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1 / -3

                                  
Query: 208 LIVVGSTADPHHRNPSLIVVVRT 140
           L  + S  DPH  +PSL++V  T
Sbjct: 953 LTFISSAVDPHRWDPSLVLVGNT 885



 Score = 25.4 bits (49), Expect(4) = 1e-17
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -3 / -2

                             
Query: 467  AIIPQVTLPP*TTLEDH 417
            AII  VTLP  TTL DH
Sbjct: 1995 AIIALVTLPHQTTLGDH 1945



 Score = 68.9 bits (144), Expect(2) = 7e-16
 Identities = 31/51 (60%), Positives = 38/51 (74%)
 Frame = +3 / +2

                                                               
Query: 261  KERYHPYCLQAVVMCQRAAITLCRRTKDMVSRKVQS*QHGVCAVVILLVDR 413
            +E+Y PY  QA VMCQ AA TLC+ TK+   ++VQS*Q GV A+VILLV R
Sbjct: 1685 QEKYRPYYPQAAVMCQLAASTLCKHTKNTALQRVQS*QLGVYAIVILLVCR 1837



 Score = 35.0 bits (70), Expect(2) = 7e-16
 Identities = 18/27 (66%), Positives = 19/27 (70%)
 Frame = +1 / +1

                                       
Query: 184  LLYCRRR*GSQQYGSQHGTIDAKILQK 264
            +LY   R GSQ  GSQ GTI AKILQK
Sbjct: 1492 VLYLILRRGSQ*LGSQCGTIHAKILQK 1572



 Score = 70.7 bits (148), Expect(2) = 1e-14
 Identities = 31/50 (62%), Positives = 34/50 (68%)
 Frame = -3 / -1

                                                              
Query: 413  PVHQEDYNGTDAMLSRLYLSRHHIFCTPA*SNRCTLAHNDSLKAVRVISL 264
            P +QEDYNG DA LSRLY  +  IFC  A*S  C LAHN SL+ VR I L
Sbjct: 1837 PTYQEDYNGIDAKLSRLYPLQRRIFCMLA*STGCKLAHNGSLRVVRAIFL 1688



 Score = 29.0 bits (57), Expect(2) = 1e-14
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -3 / -3

                               
Query: 263  FCRILASIVPC*LPYC*LP 207
            FC+ILA IVP *LP  *LP
Sbjct: 1571 FCKILAWIVPH*LPSH*LP 1515



 Score = 34.5 bits (69), Expect = 0.98
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +2 / +3

                                                    
Query: 140  GPYYNNKRRIPMVRVCCTADDDEEVNNMGVNMALSMLKFY 259
            G  Y NKRRIP +RV C AD+     N  +    S   FY
Sbjct: 885  GVPYQNKRRIPTMRVYCAADEG*SNGNWRLANCRSGQMFY 1004

>LOC_Os02g15970:12002.t01390:unspliced-genomic expressed protein|
          Length = 3781

 Score =  119 bits (254), Expect(3) = 1e-35
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +2 / +1

                                                           
Query: 266  EISPLLPSSCRYVPTCSDYSMQAYKRYGVAKGTILTAWRLCRCNPLG 406
            EISPLLPSSCRYVPTCS+YSMQAYK+YGVAKGTILTAWRLCRCNPLG
Sbjct: 2053 EISPLLPSSCRYVPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLG 2193



 Score = 44.1 bits (90), Expect(3) = 1e-35
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = +2 / +3

                                  
Query: 203  DEEVNNMGVNMALSMLKFYKRE 268
            +EEVN++GVN+ALSMLKFYK E
Sbjct: 1866 EEEVNDLGVNVALSMLKFYKSE 1931



 Score = 33.6 bits (67), Expect(3) = 1e-35
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2 / +2

                       
Query: 404  GGQGYDPPRWF 436
            GG GYDPPRWF
Sbjct: 2300 GGHGYDPPRWF 2332



 Score =  100 bits (214), Expect(3) = 1e-31
 Identities = 43/47 (91%), Positives = 43/47 (91%)
 Frame = -2 / -3

                                                           
Query: 405  PRGLQRHRRHAVKIVPFATPYLLYACIE*SLHVGT*RQLEGSKGDIS 265
            PRGLQRHRR AVKIVPFATPY LYACIE SL VGT*RQLEGSKGDIS
Sbjct: 2192 PRGLQRHRRQAVKIVPFATPYFLYACIEYSLQVGT*RQLEGSKGDIS 2052



 Score = 41.4 bits (84), Expect(3) = 1e-31
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -1 / -3

                                   
Query: 268  LSFVEF*HR*CHVDSHIVDFLIV 200
            L+FV+F*H *CHVDS ++DFL +
Sbjct: 1931 LTFVKF*HG*CHVDSQVIDFLFL 1863



 Score = 32.7 bits (65), Expect(3) = 1e-31
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = -1 / -1

                                
Query: 463  SFLR*LFLPKPPWRIISLST 404
            S L *LFL KPPW IIS++T
Sbjct: 2359 SLLW*LFLIKPPWGIISMTT 2300



 Score = 81.7 bits (172), Expect(3) = 2e-25
 Identities = 33/53 (62%), Positives = 43/53 (81%)
 Frame = +1 / +3

                                                                 
Query: 256  LQKRDITLTAFKLSLCANVQRLLYAGVQKIWCRERYNLDSMASVPL*SSWWTG 414
            + +R+ITLT  KL LCAN+Q +LYA +QKI C + YNLDS+AS+PL*SSW+ G
Sbjct: 2043 VNRRNITLTTLKLPLCANLQ*VLYASIQKIRCCKGYNLDSLASMPL*SSWYVG 2201



 Score = 41.8 bits (85), Expect(3) = 2e-25
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +3 / +1

                               
Query: 207  RKSTIWESTWHYRC*NSTK 263
            RKS  WESTWHY C*N TK
Sbjct: 1870 RKSMTWESTWHYPC*NFTK 1926



 Score = 30.4 bits (60), Expect(3) = 2e-25
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +3 / +3

                             
Query: 414  DMILQGGLGRKSYLRND 464
            DMI QGGL RKSY  ND
Sbjct: 2310 DMIPQGGLMRKSYQSND 2360



 Score = 74.8 bits (157), Expect(3) = 3e-19
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -3 / -1

                                                              
Query: 413  PVHQEDYNGTDAMLSRLYLSRHHIFCTPA*SNRCTLAHNDSLKAVRVISL 264
            P +QEDY+G DA LSRLY  +H IFC  A*S  C LAHN SL+ VRVI L
Sbjct: 2200 PTYQEDYSGIDAKLSRLYPLQHRIFCMLA*STHCKLAHNGSLRVVRVIFL 2051



 Score = 31.8 bits (63), Expect(3) = 3e-19
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -2 / -1

                               
Query: 267  SLL*NFSIDSAMLTPILLT 211
            SLL*NFS+DSA LTP  LT
Sbjct: 1930 SLL*NFSMDSATLTPKSLT 1874



 Score = 25.8 bits (50), Expect(3) = 3e-19
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3 / -3

                                 
Query: 467  AIIPQVTLPP*TTLEDHIPVH 405
            A+I  V LP  TTL DHI  H
Sbjct: 2363 AVIALVALPHQTTLGDHIHDH 2301



 Score = 71.2 bits (149), Expect(2) = 4e-16
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = +3 / +2

                                                               
Query: 261  KERYHPYCLQAVVMCQRAAITLCRRTKDMVSRKVQS*QHGVCAVVILLVDR 413
            +E+YHPY  QA VMCQ A  TLC+ TK+ V ++VQS*Q GV A VILLV R
Sbjct: 2048 QEKYHPYYPQAAVMCQLAVSTLCKHTKNTVLQRVQS*QLGVYAAVILLVCR 2200



 Score = 33.6 bits (67), Expect(2) = 4e-16
 Identities = 16/21 (76%), Positives = 16/21 (76%)
 Frame = +1 / +2

                                 
Query: 202  R*GSQQYGSQHGTIDAKILQK 264
            R GSQ  GSQ GTI AKILQK
Sbjct: 1865 RRGSQ*LGSQRGTIHAKILQK 1927



 Score = 74.4 bits (156), Expect(2) = 9e-16
 Identities = 33/51 (64%), Positives = 37/51 (72%)
 Frame = -1 / -2

                                                               
Query: 415  SLSTKRITTAQTPCCQDCTFRDTISFVRLHRVIAARWHITTA*RQ*G*YLS 263
            +L TKRIT A TP CQDCT  +T+ FV LHRV+ A WHIT A*  *G*Y S
Sbjct: 2202 NLHTKRITAA*TPSCQDCTLCNTVFFVCLHRVLTASWHITAA*G**G*YFS 2050



 Score = 29.0 bits (57), Expect(2) = 9e-16
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -3 / -2

                               
Query: 263  FCRILASIVPC*LPYC*LP 207
            FC+ILA IVP *LP  *LP
Sbjct: 1926 FCKILAWIVPR*LPSH*LP 1870



 Score = 32.7 bits (65), Expect = 3.5
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = +2 / +2

                                                                       
Query: 140  GPYYNNKRRIPMVRVCCTADDDEEVNNMGVNMALSMLKFYKREISPLLPSSCRYVPTCS 316
            G  Y NKRRI  +RV C AD+     N  +    S   FY R       +  RY  T +
Sbjct: 1082 GVPYQNKRRILTMRVYCAADEG*SNGNCRLASCRSGQMFYFRGKCKFATTLNRYCKTAT 1258

>LOC_Os02g35750:12002.t03213:unspliced-genomic rf1 protein, mitochondrial precursor, putative, expressed|
          Length = 3903

 Score = 34.5 bits (69), Expect = 0.98
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -1 / -3

                                             
Query: 196 GSTADPHHRNPSLIVVVRTSERRCAPRERQEGSR 95
           G  ADP  R+ S     RTSERR +P E++E +R
Sbjct: 307 GLRADPTRRSASSSSPRRTSERRRSPEEKEEDAR 206

>LOC_Os05g06600:12005.t00550:unspliced-genomic hypothetical protein|
          Length = 2405

 Score = 29.0 bits (57), Expect(2) = 1.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3 / -1

                                             
Query: 224 PYC*LPHRRRQYSRPAPSESFSYCCSTDQRKKVR 123
           PY  LP R R  ++P P    S  C+   R + R
Sbjct: 206 PYATLPRRARGCAKPPPHRGASLACAQPNRCRPR 105



 Score = 22.1 bits (42), Expect(2) = 1.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2 / -1

                           
Query: 396 LQRHRRHAVKIVPFAT 349
           L+  RRH  ++ P+AT
Sbjct: 242 LRTSRRHGARLPPYAT 195

>LOC_Os11g11710:12011.t01058:unspliced-genomic expressed protein|
          Length = 1224

 Score = 29.9 bits (59), Expect(2) = 1.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1 / -2

                               
Query: 181 PHHRNPSLIVVVRTSERRCA 122
           P  RNP+   + RT+ RRCA
Sbjct: 665 PRRRNPASSTIARTARRRCA 606



 Score = 24.4 bits (47), Expect(2) = 1.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1 / -1

                           
Query: 394  TTAQTPCCQDCTFRD 350
            TT   PC Q CT+ D
Sbjct: 1149 TTEGAPCPQQCTYSD 1105

>LOC_Os10g41230:12010.t03359:unspliced-genomic homeobox-leucine zipper protein HAT1, putative, expressed|
          Length = 1533

 Score = 33.1 bits (66), Expect = 2.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3 / -1

                                     
Query: 171  RWCGSAVLPTTMRKSTIWESTWHYR 245
            RWCG+A    ++R  + W S W  R
Sbjct: 1080 RWCGAAAAVASLRARSSWSSRWRRR 1006

>LOC_Os01g33869:12001.t02950:unspliced-genomic expressed protein|
          Length = 15642

 Score = 29.5 bits (58), Expect(2) = 3.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1 / -1

                                          
Query: 478   FQHQPSFLR*LFLPKPPWRIISLSTKRIT 392
             +++ P  LR*  LP PP    ++ T+RIT
Sbjct: 12420 YEYPPEILR*YELPPPPPESQTIETRRIT 12334



 Score = 27.2 bits (53), Expect(2) = 3.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1 / -3

                                   
Query: 220  IVDFLIVVGSTADPHHRNPSLIV 152
            +VDF++  GS      R PSL+V
Sbjct: 2056 VVDFVVAAGSAC*SRGRTPSLVV 1988

>LOC_Os01g36590:12001.t03207:unspliced-genomic nodulin-like protein, putative|
          Length = 5502

 Score = 32.7 bits (65), Expect = 3.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -3 / -1

                                                    
Query: 254  ILASIVPC*LPYC*LPHRRRQYSRPAPSESFSYCCSTDQR 135
            +L  ++ C* P       R QY+ P PS     CCS+D+R
Sbjct: 4926 LLHYLLDC*YPPLLSSSPREQYTGPQPSALRLLCCSSDKR 4807

>LOC_Os06g51420:12006.t04825:unspliced-genomic coiled-coil domain-containing protein 12, putative, expressed|
          Length = 2645

 Score = 32.2 bits (64), Expect = 4.8
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -3 / -1

                           
Query: 188  SRPAPSESFSYCCST 144
            S P+PS SFS+CCST
Sbjct: 2273 SLPSPSASFSFCCST 2229

>LOC_Os01g02530:12001.t00148:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 6155

 Score = 31.8 bits (63), Expect = 6.6
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -3 / +3

                                           
Query: 203 RRRQYSRPAPSESFSYCCSTDQRKKVRSSREA 108
           RRR+ ++PAPS S+S   ST + +   S+RE+
Sbjct: 45  RRRRGAKPAPSSSYSPTSSTPKSQAGGSARES 140

>LOC_Os11g30240:12011.t02628:unspliced-genomic conserved hypothetical protein|
          Length = 3339

 Score = 31.3 bits (62), Expect = 9.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3 / -2

                              
Query: 234 WHYRC*NSTKERYHPYCLQ 290
           W++ C N T+E +HP C Q
Sbjct: 683 WNWLCLNKTQEAFHPLCSQ 627

>LOC_Os07g13560:12007.t01221:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 6410

 Score = 31.3 bits (62), Expect = 9.0
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +3 / +2

                                            
Query: 576 LCCQLCHDTKMIVCLSMQKMVVVNGKWIVQFPW 674
           L C +CH   M++ +S+ K++++   W ++F +
Sbjct: 689 LLCLICHVQPMLLFISLAKIMMLEYIWCIEFTY 787

>LOC_Os07g07310:12007.t00609:unspliced-genomic polynucleotide phosphorylase, putative, expressed|
          Length = 11064

 Score = 31.3 bits (62), Expect = 9.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3 / +2

                               
Query: 555  RESVFY*LCCQLCHDTKMI 611
            + S+ + LCC LCHDTK +
Sbjct: 2954 KSSMDFLLCCTLCHDTKTL 3010

>LOC_Os06g44260:12006.t04114:unspliced-genomic GDP-L-fucose synthase 2, putative, expressed|
          Length = 1081

 Score = 31.3 bits (62), Expect = 9.0
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3 / -3

                                 
Query: 203 RRRQYSRPAPSESFSYCCSTDQ 138
           RRR++ RP PS+ +  CC+ ++
Sbjct: 107 RRRRHRRPRPSQCYHCCCAAEK 42

>LOC_Os10g08260:12010.t00650:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 5664

 Score = 31.3 bits (62), Expect = 9.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2 / +2

                                   
Query: 414  PCPPRGLQRHRRHAVKIVPFATP 346
            PC  RG+Q+ +R A+ +VP  +P
Sbjct: 4955 PCSNRGMQKKKRSALSLVPVISP 5023

>LOC_Os06g04880:12006.t00377:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 6582

 Score = 31.3 bits (62), Expect = 9.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1 / +1

                                       
Query: 424  RIISLSTKRITTAQTPCCQDCTFRDTI 344
            R ++++   +T    PCC DCT R T+
Sbjct: 5584 RDLAIADSEVTNGDCPCCGDCTRRWTL 5664


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 347,764,938
Number of extensions: 5582587
Number of successful extensions: 21661
Number of sequences better than 10.0: 16
Length of query: 277
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 228
Effective length of database: 52,856,264
Effective search space: 12051228192
Effective search space used: 12051228192
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)