ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf29l11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os04g0394500:Os04g0394500 363 e-100
2AK066619:Os01g0889200 104 1e-22
3Os02g0514800:Os02g0514800 51 2e-06
4AK102868:Os08g0290500 31 1.8
5AK067122:Os08g0290500 31 1.8
6AK066894:Os08g0290500 31 1.8

>Os04g0394500:Os04g0394500 |
          Length = 339
 Score =  363 bits (932), Expect = e-100
 Identities = 197/310 (63%), Positives = 222/310 (71%), Gaps = 7/310 (2%)
 Frame = +3

Query: 135  MDDKSNVKKEIDGSLPARPRKGGLKFXXXXXXXXXXXXXXXTEPAEESKDDIIDKELLMK 314
            MD K  VKKE DG LP  PRKGGLKF               TEPAEESKD+ +DKELLMK
Sbjct: 1    MDSKGKVKKETDG-LP--PRKGGLKFAPKVRPKKAPKIVPKTEPAEESKDETVDKELLMK 57

Query: 315  LKTSQITDPFGRRPKIEKKEINTQVAFGQGNSSYARSFPTRNYS--AAPKAPKEYVDPWD 488
            LKTSQ TDPF R+ K EKKE+ TQVAFGQGNSSYARSFP ++ +  +A K PKEYV+PWD
Sbjct: 58   LKTSQSTDPFVRKFKTEKKEMRTQVAFGQGNSSYARSFPMQSSADGSASKLPKEYVEPWD 117

Query: 489  YTHSDYPITLPLRRPYSGDPEILDEEEFGENSASRAHYGEFTAADELGLMDWSDTXXXXX 668
            YTHSDYP+TLPLRRPYSGDPEIL+EEEFGE+SA+ A  GE T A+ELGLM          
Sbjct: 118  YTHSDYPVTLPLRRPYSGDPEILNEEEFGESSATGAQDGELTTAEELGLM---------- 167

Query: 669  XXXXXXXXXXKQTESVEEPNTGSEENVEP-ATSSKVARGQTLP----GSKIKDLPGGLMG 833
                      KQ +SV E + G   + EP +TSSK     T P    GSK+KDLP G MG
Sbjct: 168  --MPASLPLPKQPDSVAETDKGDGVDAEPTSTSSKEMHAGTRPPKVLGSKLKDLPEGFMG 225

Query: 834  KILVYKSGKVKMKIGDALFDVSPGSNCMFVQEAVAVNTRENHCCALGEVSKRAVVTPDVA 1013
            KILVY+SGKVKMKIGD+LFDVSPGSNCMFVQE  A+N RE HCC LGE+SKRA+VTPD+ 
Sbjct: 226  KILVYRSGKVKMKIGDSLFDVSPGSNCMFVQEVAAINAREKHCCTLGEISKRAIVTPDIE 285

Query: 1014 HLLGSTDKME 1043
            HLL S DKME
Sbjct: 286  HLLDSFDKME 295



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>AK066619:Os01g0889200 |
          Length = 198

 Score =  104 bits (260), Expect = 1e-22
 Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
 Frame = +3

Query: 534  YSGDPEILDEEEFGENS--------ASRAHYGEFTAADELGLMDWSDTXXXXXXXXXXXX 689
            Y  + +  D+++ G+N+        +S         A+EL L++  DT            
Sbjct: 34   YDDEDDDDDDDDEGDNNVELEEIRPSSTECESSIHPAEELNLLEQGDTRRMLLFQLPKSL 93

Query: 690  XXXKQTESVEEPNTGSEENVEPATSSKVARGQTLPGSKIKDLPGGLMGKILVYKSGKVKM 869
               + + +VE      ++ V+              GS +K+LP G +GK++VYKSGK+KM
Sbjct: 94   PLPRISAAVERNGKARDKEVKE-------------GSNLKELPQGYLGKMVVYKSGKIKM 140

Query: 870  KIGDALFDVSPGSNCMFVQEAVAVNTRENHCCALGEV-SKRAVVTPDVAHLL 1022
            K+GD +FDV+PG  C   Q   A+NT+E HCC LGE+ S+  VVTPDV  LL
Sbjct: 141  KLGDVMFDVNPGEECRMAQHVAAINTKEKHCCLLGEIESRHVVVTPDVDSLL 192



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>Os02g0514800:Os02g0514800 |
          Length = 204

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 22/43 (51%), Positives = 29/43 (67%)
 Frame = +3

Query: 894  VSPGSNCMFVQEAVAVNTRENHCCALGEVSKRAVVTPDVAHLL 1022
            VS G  C FVQE V +NTRE H C+LG++ K  + T D+ +LL
Sbjct: 160  VSAGMKCEFVQEVVPINTREKHFCSLGKIKKHLIGTTDIDNLL 202



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>AK102868:Os08g0290500 |
          Length = 142

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = -1

Query: 782 PPCHFRACGRFNILLRASIWFFNRLCLLW*RKRHR*LEEEQLWCVGPIH*SKFICCRKFA 603
           PP H   C    +  R S+ F  R CLLW  +R R     +L  VG         CR+  
Sbjct: 52  PPRHLHRCRHLPLFRRLSL-FHLRCCLLWCHRRRR----RRLPHVGR--------CRRLT 98

Query: 602 IV--SSAGRILSKLLFIKNL 549
           I+  SS  R  S LLF +++
Sbjct: 99  ILHQSSPRRDRSSLLFSRHI 118



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>AK067122:Os08g0290500 |
          Length = 142

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = -1

Query: 782 PPCHFRACGRFNILLRASIWFFNRLCLLW*RKRHR*LEEEQLWCVGPIH*SKFICCRKFA 603
           PP H   C    +  R S+ F  R CLLW  +R R     +L  VG         CR+  
Sbjct: 52  PPRHLHRCRHLPLFRRLSL-FHLRCCLLWCHRRRR----RRLPHVGR--------CRRLT 98

Query: 602 IV--SSAGRILSKLLFIKNL 549
           I+  SS  R  S LLF +++
Sbjct: 99  ILHQSSPRRDRSSLLFSRHI 118



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>AK066894:Os08g0290500 |
          Length = 142

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = -1

Query: 782 PPCHFRACGRFNILLRASIWFFNRLCLLW*RKRHR*LEEEQLWCVGPIH*SKFICCRKFA 603
           PP H   C    +  R S+ F  R CLLW  +R R     +L  VG         CR+  
Sbjct: 52  PPRHLHRCRHLPLFRRLSL-FHLRCCLLWCHRRRR----RRLPHVGR--------CRRLT 98

Query: 602 IV--SSAGRILSKLLFIKNL 549
           I+  SS  R  S LLF +++
Sbjct: 99  ILHQSSPRRDRSSLLFSRHI 118


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 37,510,457
Number of extensions: 835824
Number of successful extensions: 2037
Number of sequences better than 10.0: 6
Number of HSP's gapped: 2031
Number of HSP's successfully gapped: 6
Length of query: 447
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 343
Effective length of database: 11,235,591
Effective search space: 3853807713
Effective search space used: 3853807713
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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