| Clone Name | FLbaf29l11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0394500:Os04g0394500 | 363 | e-100 | 2 | AK066619:Os01g0889200 | 104 | 1e-22 | 3 | Os02g0514800:Os02g0514800 | 51 | 2e-06 | 4 | AK102868:Os08g0290500 | 31 | 1.8 | 5 | AK067122:Os08g0290500 | 31 | 1.8 | 6 | AK066894:Os08g0290500 | 31 | 1.8 |
|---|
>Os04g0394500:Os04g0394500 | Length = 339 Score = 363 bits (932), Expect = e-100 Identities = 197/310 (63%), Positives = 222/310 (71%), Gaps = 7/310 (2%) Frame = +3 Query: 135 MDDKSNVKKEIDGSLPARPRKGGLKFXXXXXXXXXXXXXXXTEPAEESKDDIIDKELLMK 314 MD K VKKE DG LP PRKGGLKF TEPAEESKD+ +DKELLMK Sbjct: 1 MDSKGKVKKETDG-LP--PRKGGLKFAPKVRPKKAPKIVPKTEPAEESKDETVDKELLMK 57 Query: 315 LKTSQITDPFGRRPKIEKKEINTQVAFGQGNSSYARSFPTRNYS--AAPKAPKEYVDPWD 488 LKTSQ TDPF R+ K EKKE+ TQVAFGQGNSSYARSFP ++ + +A K PKEYV+PWD Sbjct: 58 LKTSQSTDPFVRKFKTEKKEMRTQVAFGQGNSSYARSFPMQSSADGSASKLPKEYVEPWD 117 Query: 489 YTHSDYPITLPLRRPYSGDPEILDEEEFGENSASRAHYGEFTAADELGLMDWSDTXXXXX 668 YTHSDYP+TLPLRRPYSGDPEIL+EEEFGE+SA+ A GE T A+ELGLM Sbjct: 118 YTHSDYPVTLPLRRPYSGDPEILNEEEFGESSATGAQDGELTTAEELGLM---------- 167 Query: 669 XXXXXXXXXXKQTESVEEPNTGSEENVEP-ATSSKVARGQTLP----GSKIKDLPGGLMG 833 KQ +SV E + G + EP +TSSK T P GSK+KDLP G MG Sbjct: 168 --MPASLPLPKQPDSVAETDKGDGVDAEPTSTSSKEMHAGTRPPKVLGSKLKDLPEGFMG 225 Query: 834 KILVYKSGKVKMKIGDALFDVSPGSNCMFVQEAVAVNTRENHCCALGEVSKRAVVTPDVA 1013 KILVY+SGKVKMKIGD+LFDVSPGSNCMFVQE A+N RE HCC LGE+SKRA+VTPD+ Sbjct: 226 KILVYRSGKVKMKIGDSLFDVSPGSNCMFVQEVAAINAREKHCCTLGEISKRAIVTPDIE 285 Query: 1014 HLLGSTDKME 1043 HLL S DKME Sbjct: 286 HLLDSFDKME 295
>AK066619:Os01g0889200 | Length = 198 Score = 104 bits (260), Expect = 1e-22 Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 9/172 (5%) Frame = +3 Query: 534 YSGDPEILDEEEFGENS--------ASRAHYGEFTAADELGLMDWSDTXXXXXXXXXXXX 689 Y + + D+++ G+N+ +S A+EL L++ DT Sbjct: 34 YDDEDDDDDDDDEGDNNVELEEIRPSSTECESSIHPAEELNLLEQGDTRRMLLFQLPKSL 93 Query: 690 XXXKQTESVEEPNTGSEENVEPATSSKVARGQTLPGSKIKDLPGGLMGKILVYKSGKVKM 869 + + +VE ++ V+ GS +K+LP G +GK++VYKSGK+KM Sbjct: 94 PLPRISAAVERNGKARDKEVKE-------------GSNLKELPQGYLGKMVVYKSGKIKM 140 Query: 870 KIGDALFDVSPGSNCMFVQEAVAVNTRENHCCALGEV-SKRAVVTPDVAHLL 1022 K+GD +FDV+PG C Q A+NT+E HCC LGE+ S+ VVTPDV LL Sbjct: 141 KLGDVMFDVNPGEECRMAQHVAAINTKEKHCCLLGEIESRHVVVTPDVDSLL 192
>Os02g0514800:Os02g0514800 | Length = 204 Score = 50.8 bits (120), Expect = 2e-06 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = +3 Query: 894 VSPGSNCMFVQEAVAVNTRENHCCALGEVSKRAVVTPDVAHLL 1022 VS G C FVQE V +NTRE H C+LG++ K + T D+ +LL Sbjct: 160 VSAGMKCEFVQEVVPINTREKHFCSLGKIKKHLIGTTDIDNLL 202
>AK102868:Os08g0290500 | Length = 142 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = -1 Query: 782 PPCHFRACGRFNILLRASIWFFNRLCLLW*RKRHR*LEEEQLWCVGPIH*SKFICCRKFA 603 PP H C + R S+ F R CLLW +R R +L VG CR+ Sbjct: 52 PPRHLHRCRHLPLFRRLSL-FHLRCCLLWCHRRRR----RRLPHVGR--------CRRLT 98 Query: 602 IV--SSAGRILSKLLFIKNL 549 I+ SS R S LLF +++ Sbjct: 99 ILHQSSPRRDRSSLLFSRHI 118
>AK067122:Os08g0290500 | Length = 142 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = -1 Query: 782 PPCHFRACGRFNILLRASIWFFNRLCLLW*RKRHR*LEEEQLWCVGPIH*SKFICCRKFA 603 PP H C + R S+ F R CLLW +R R +L VG CR+ Sbjct: 52 PPRHLHRCRHLPLFRRLSL-FHLRCCLLWCHRRRR----RRLPHVGR--------CRRLT 98 Query: 602 IV--SSAGRILSKLLFIKNL 549 I+ SS R S LLF +++ Sbjct: 99 ILHQSSPRRDRSSLLFSRHI 118
>AK066894:Os08g0290500 | Length = 142 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = -1 Query: 782 PPCHFRACGRFNILLRASIWFFNRLCLLW*RKRHR*LEEEQLWCVGPIH*SKFICCRKFA 603 PP H C + R S+ F R CLLW +R R +L VG CR+ Sbjct: 52 PPRHLHRCRHLPLFRRLSL-FHLRCCLLWCHRRRR----RRLPHVGR--------CRRLT 98 Query: 602 IV--SSAGRILSKLLFIKNL 549 I+ SS R S LLF +++ Sbjct: 99 ILHQSSPRRDRSSLLFSRHI 118 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,510,457 Number of extensions: 835824 Number of successful extensions: 2037 Number of sequences better than 10.0: 6 Number of HSP's gapped: 2031 Number of HSP's successfully gapped: 6 Length of query: 447 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 343 Effective length of database: 11,235,591 Effective search space: 3853807713 Effective search space used: 3853807713 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)