>Q76C99:RF1_ORYSA Rf1 protein, mitochondrial precursor - Oryza sativa (Rice)|
Length = 791
Score = 157 bits (396), Expect = 2e-37
Identities = 102/392 (26%), Positives = 185/392 (47%), Gaps = 2/392 (0%)
Frame = +3
Query: 462 ISDYNDIISALARGGDYDSAVALFRAL--EPNGVVAPDAHSFAIAVQCFCRKGAPDEAKE 635
+ YN ++ L A+ L + + G PD S+ + F ++G D+A
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 636 TLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLC 815
T EM+ RG LP V +++++ LCK + +AMEV +TM G P TYNS++ G C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 816 YVGRLEEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTI 995
G+ +EA L K++ S D+ T+++++D CK GR +A IF+ + GL P I
Sbjct: 278 SSGQPKEAIGFLKKMR-SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336
Query: 996 FTYNALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFK 1175
TY LL G+ +G L++ + LL M N PD FSI++ A + G+V A F
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPDHYVFSILICAYAKQGKVDQAMLVFS 395
Query: 1176 RMEHAGFEADSRALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLMAQA 1355
+M G ++ + LC+ + ++L F +++ G P + Y +
Sbjct: 396 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAML-----YFEQMIDEGLSPGNIVYNSLIHG 450
Query: 1356 LARGGEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAKDFVPG 1535
L + + A ++ +M+ +G L + ++ + C R ++ ++ +++ P
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 1536 RNAFDALLEELSRQGRWPDAMAVYAAAVKRGV 1631
++ L+ G+ +AM + + V G+
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Score = 146 bits (369), Expect = 3e-34
Identities = 116/457 (25%), Positives = 190/457 (41%), Gaps = 69/457 (15%)
Frame = +3
Query: 471 YNDIISALARGGDYDSAVALFRALEPNGVVAPDAHSFAIAVQCFCRKGAPDEAKETLDEM 650
YN II+AL + D A+ + + NGV+ PD ++ + +C G P EA L +M
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVM-PDCMTYNSILHGYCSSGQPKEAIGFLKKM 292
Query: 651 VARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRL 830
+ G P V +S ++ LCK GR A ++FD+M G +P I TY +L+ G G L
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352
Query: 831 EEARVLLNKLKDSPKQTADIYTFTIVLDGF------------------------------ 920
E LL+ + + D Y F+I++ +
Sbjct: 353 VEMHGLLDLMVRNGIHP-DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 921 -----CKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMCDND 1085
CK GR EDAM FE I GLSP YN+L++G C +A +L++EM D
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 1086 DC----------------------------------PPDKISFSIVLPALLRAGEVSAAW 1163
C P+ I+++ ++ AG++ A
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 1164 KTFKRMEHAGFEADSRALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCL 1343
K M G + ++ TL G C+ IS + +A +F ++ ++G P TY +
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCK-----ISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 1344 MAQALARGGEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAKD 1523
+ Q L + AA + + G + Y ++ LC T DAL++ + D
Sbjct: 587 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646
Query: 1524 FVPGRNAFDALLEELSRQGRWPDAMAVYAAAVKRGVV 1634
F+ +++ L + GR +A ++ A G+V
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683
Score = 146 bits (368), Expect = 3e-34
Identities = 121/485 (24%), Positives = 207/485 (42%), Gaps = 47/485 (9%)
Frame = +3
Query: 408 EERVKVLDLLQRDDAALTISDYNDIISALARGGDYDSAVALFRALEPNGV--VAPDAHSF 581
E+ V D L R +I N ++ +AR +AV+ + + G V PD ++
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTY 90
Query: 582 AIAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRAME-VFDTMR 758
I + C CR G D L ++ +G+ AF+ ++ LC R + AM+ V M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 759 SVGSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPK--QTADIYTFTIVLDGF---- 920
+G P + +YN L+ GLC R +EA LL+ + D D+ ++T V++GF
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 921 -------------------------------CKVGRTEDAMAIFEDAIRLGLSPTIFTYN 1007
CK + AM + ++ G+ P TYN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 1008 ALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRMEH 1187
++L+G+C G +A L +M +D PD +++S+++ L + G A K F M
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 1188 AGFEADSRALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLMAQALARG 1367
G + + TL +G + A L E + +V G P Y + ++ A A+
Sbjct: 330 RGLKPEITTYGTLLQGYATKGA-----LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 1368 GEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAKDFVPGRNAF 1547
G+VD A+ + M ++G Y V+ LC R DA+ +I + PG +
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 1548 DALLEELSRQGRWPDAMAVYAAAVKRGVVVS-------LKRHVKEALARDQEKEEAWESP 1706
++L+ L +W A + + RG+ ++ + H KE R E E+ +E
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE--GRVIESEKLFELM 502
Query: 1707 AQLGV 1721
++GV
Sbjct: 503 VRIGV 507
Score = 136 bits (343), Expect = 3e-31
Identities = 110/438 (25%), Positives = 182/438 (41%), Gaps = 64/438 (14%)
Frame = +3
Query: 405 MEERVKVLDLLQRDDAALTISDYNDIISALARGGDYDSAVALFRALEPNGVVAPDAHSFA 584
ME R K+ D + + I+ Y ++ A G L + NG+ PD + F+
Sbjct: 318 MEAR-KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI-HPDHYVFS 375
Query: 585 IAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSV 764
I + + ++G D+A +M +G P+ + AV+G LCK GRV AM F+ M
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 765 GSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTED 944
G P YNSLI GLC + E A L+ ++ D I+ F ++D CK GR +
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIE 494
Query: 945 AMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMC---------------- 1076
+ +FE +R+G+ P + TYN L+NG+C G + +A LL M
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 1077 ------------------DNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRMEHAGFEA 1202
++ PD I+++I+L L + +AA + + R+ +G +
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614
Query: 1203 DSRALDTLARGLCRQ-------------CAADISVLR-----------------EAKEVF 1292
+ + + GLC+ C D+ + EAK++F
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 1293 GKVVAAGHEPVSYTYCLMAQALARGGEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDR 1472
+ G P +TY LMA+ + G ++ + M G + +VR L R
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734
Query: 1473 SRTYDALRVLAVVIAKDF 1526
A L+++ K F
Sbjct: 735 GEITRAGTYLSMIDEKHF 752
Score = 103 bits (256), Expect = 3e-21
Identities = 80/319 (25%), Positives = 142/319 (44%)
Frame = +3
Query: 471 YNDIISALARGGDYDSAVALFRALEPNGVVAPDAHSFAIAVQCFCRKGAPDEAKETLDEM 650
YN +I L ++ A L + G+ + F + C++G E+++ + M
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 651 VARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRL 830
V G P+V ++ ++ C G++ AM++ M SVG +P TY++LI G C + R+
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 831 EEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNA 1010
E+A VL ++ +S + DI T+ I+L G + RT A ++ G + TYN
Sbjct: 563 EDALVLFKEM-ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 1011 LLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRMEHA 1190
+L+G CK A + +C D + +F+I++ ALL+ G A F
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLC-LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680
Query: 1191 GFEADSRALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLMAQALARGG 1370
G + +A + Q +L E ++F + G S + + L + G
Sbjct: 681 GLVPNYWTYRLMAENIIGQ-----GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 1371 EVDAAVAILDDMVRKGYAL 1427
E+ A L + K ++L
Sbjct: 736 EITRAGTYLSMIDEKHFSL 754
>P0C043:Y4791_ARATH Putative PPR-repeat protein At4g17915 - Arabidopsis thaliana|
(Mouse-ear cress)
Length = 463
Score = 110 bits (275), Expect = 2e-23
Identities = 100/379 (26%), Positives = 166/379 (43%), Gaps = 1/379 (0%)
Frame = +3
Query: 462 ISDYNDIISALARGGDYDSAVALFRALEPNGVVAPDAHSFAIAVQCFCRKGAPDEAKETL 641
++ YN +I+ AR D + LF + G+ PD S+ + C+ + G +EA L
Sbjct: 83 VATYNSLIAGAARRLMLDHVLYLFDEMLEWGIY-PDLWSYNTLMCCYFKLGKHEEAFRVL 141
Query: 642 -DEMVARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCY 818
++ G P ++ ++ LCK G + A+E+F M+S +P + TYN LI GLC
Sbjct: 142 YKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQS-RFKPELMTYNILINGLCK 200
Query: 819 VGRLEEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIF 998
R+ A+ +L +LK S T + T+T +L + K R + +F + R G + +
Sbjct: 201 SRRVGTAKWMLTELKKSG-YTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGY 259
Query: 999 TYNALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKR 1178
Y A+++ K G +AY+ + E+ D +S++ +L + G + A
Sbjct: 260 AYFAVVSALIKTGRTKEAYEYMQELVRKGR-RHDIVSYNTLLNLYFKDGNLDAVDDLLGE 318
Query: 1179 MEHAGFEADSRALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLMAQAL 1358
+E G +AD + GL R R A+E F + G T + L
Sbjct: 319 IERRGMKADEYTHTIIVNGLLRT-----GQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGL 373
Query: 1359 ARGGEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAKDFVPGR 1538
+ G VD A+ + M K + YT VV LC R A ++L K
Sbjct: 374 CKAGHVDRAMRYFESMEVKD----EYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIKIPT 429
Query: 1539 NAFDALLEELSRQGRWPDA 1595
+A A+L L G + +A
Sbjct: 430 SARRAVLSGLRMSGCYGEA 448
Score = 96.7 bits (239), Expect = 3e-19
Identities = 76/323 (23%), Positives = 149/323 (46%), Gaps = 16/323 (4%)
Frame = +3
Query: 672 SVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRLEEARVLL 851
S + V LCK ++ +A + +G +P + TYN+LI G C +EEA +
Sbjct: 12 STRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVT 71
Query: 852 NKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCK 1031
+++D+ + D+ T+ ++ G + + + +F++ + G+ P +++YN L+ + K
Sbjct: 72 RRMRDAGIR-PDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFK 130
Query: 1032 EGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRMEHAGFEADSR 1211
G +A+ +L + P +++++L AL + G + A + FK M+ + F+ +
Sbjct: 131 LGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQ-SRFKPELM 189
Query: 1212 ALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLMAQALARGGEVDAAVA 1391
+ L GLC+ + AK + ++ +G+ P + TY + + + + +
Sbjct: 190 TYNILINGLCKS-----RRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQ 244
Query: 1392 ILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAKD---------------F 1526
+ +M R+GY AY VV AL RT +A + ++ K F
Sbjct: 245 LFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYF 304
Query: 1527 VPGR-NAFDALLEELSRQGRWPD 1592
G +A D LL E+ R+G D
Sbjct: 305 KDGNLDAVDDLLGEIERRGMKAD 327
Score = 95.5 bits (236), Expect = 7e-19
Identities = 70/308 (22%), Positives = 136/308 (44%)
Frame = +3
Query: 558 VAPDAHSFAIAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRAM 737
V PD ++ + +CR +EA M G P V+ +++++ +R + +
Sbjct: 44 VDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVL 103
Query: 738 EVFDTMRSVGSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTFTIVLDG 917
+FD M G P + +YN+L+ +G+ EEA +L K T+ ++LD
Sbjct: 104 YLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDA 163
Query: 918 FCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMCDNDDCPP 1097
CK G ++A+ +F++ ++ P + TYN L+NG CK + A +L E+ P
Sbjct: 164 LCKCGYIDNALELFKE-MQSRFKPELMTYNILINGLCKSRRVGTAKWMLTEL-KKSGYTP 221
Query: 1098 DKISFSIVLPALLRAGEVSAAWKTFKRMEHAGFEADSRALDTLARGLCRQCAADISVLRE 1277
+ ++++ +L + + + F M+ G+ D A + L + +E
Sbjct: 222 NAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIK-----TGRTKE 276
Query: 1278 AKEVFGKVVAAGHEPVSYTYCLMAQALARGGEVDAAVAILDDMVRKGYALRKRAYTDVVR 1457
A E ++V G +Y + + G +DA +L ++ R+G + +T +V
Sbjct: 277 AYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVN 336
Query: 1458 ALCDRSRT 1481
L +T
Sbjct: 337 GLLRTGQT 344
Score = 86.7 bits (213), Expect = 3e-16
Identities = 64/279 (22%), Positives = 129/279 (46%), Gaps = 1/279 (0%)
Frame = +3
Query: 585 IAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSV 764
I V C+ ++A+ + + + G P V ++ ++ C+ + A V MR
Sbjct: 18 ICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDA 77
Query: 765 GSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTED 944
G P + TYNSLI G L+ L +++ + D++++ ++ + K+G+ E+
Sbjct: 78 GIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIY-PDLWSYNTLMCCYFKLGKHEE 136
Query: 945 AM-AIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIV 1121
A +++D GL+P TYN LL+ CK G + A +L EM P+ ++++I+
Sbjct: 137 AFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEM--QSRFKPELMTYNIL 194
Query: 1122 LPALLRAGEVSAAWKTFKRMEHAGFEADSRALDTLARGLCRQCAADISVLREAKEVFGKV 1301
+ L ++ V A ++ +G+ ++ T+ + + +R ++F ++
Sbjct: 195 INGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFK-----TRRIRRGLQLFLEM 249
Query: 1302 VAAGHEPVSYTYCLMAQALARGGEVDAAVAILDDMVRKG 1418
G+ Y Y + AL + G A + ++VRKG
Sbjct: 250 KREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKG 288
Score = 71.2 bits (173), Expect = 1e-11
Identities = 66/282 (23%), Positives = 118/282 (41%), Gaps = 20/282 (7%)
Frame = +3
Query: 903 IVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMCDN 1082
I +D CK + E A ++ D IRLG+ P + TYN L++G+C+ + +AY + M D
Sbjct: 18 ICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRD- 76
Query: 1083 DDCPPDKISFSIVLPALLRAGEVSAAWKTFKRMEHAGFEADSRALDTLARGLCRQCAADI 1262
PD +++ ++ R + F M G D + +TL +C C +
Sbjct: 77 AGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTL---MC--CYFKL 131
Query: 1263 SVLREAKEVFGK-VVAAGHEPVSYTYCLMAQALARGGEVDAAVAILDDMVRKGYALRKRA 1439
EA V K + AG P TY ++ AL + G +D A+ + +M + +
Sbjct: 132 GKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEM-QSRFKPELMT 190
Query: 1440 YTDVVRALCDRSRTYDALRVLAVVIAKDFVPGRNAFDALLE----------------ELS 1571
Y ++ LC R A +L + + P + +L+ E+
Sbjct: 191 YNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMK 250
Query: 1572 RQGRWPDAMAVYA---AAVKRGVVVSLKRHVKEALARDQEKE 1688
R+G D A +A A +K G +++E + + + +
Sbjct: 251 REGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHD 292
>P42704:LPPRC_HUMAN 130 kDa leucine-rich protein - Homo sapiens (Human)|
Length = 1273
Score = 54.3 bits (129), Expect = 2e-06
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 4/191 (2%)
Frame = +3
Query: 372 RDCARRIMSLPMEERV----KVLDLLQRDDAALTISDYNDIISALARGGDYDSAVALFRA 539
R C + L +EER ++ D LQ+ A +S YN ++ + +Y + F A
Sbjct: 7 RSCGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQN-EYKFSPTDFLA 65
Query: 540 LEPNGVVAPDAHSFAIAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRG 719
+ P+ ++ + +C G + A + L M + + + FSA+V + G
Sbjct: 66 KMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAG 125
Query: 720 RVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTF 899
+ A + MR G EP TY +L+ G ++ + L K++ D
Sbjct: 126 DMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLL 185
Query: 900 TIVLDGFCKVG 932
I+ F K G
Sbjct: 186 QIIF-SFSKAG 195
Score = 44.7 bits (104), Expect = 0.001
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Frame = +3
Query: 720 RVTRAMEVFDTMRSVGSEPTIRTYNSLI----------GGLCYVGRLEEARVLLNKLKDS 869
R A ++DT++ +G+ + YN+L+ ++ ++EEA + N++
Sbjct: 21 RTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRV--- 77
Query: 870 PKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLK 1049
T+ ++ +C VG E A I L T ++AL+ GH + G++
Sbjct: 78 --------TYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMEN 129
Query: 1050 AYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRME 1184
A ++L M D P ++ +L A G++ +T +++E
Sbjct: 130 AENILTVMRD-AGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVE 173
Score = 34.3 bits (77), Expect = 1.9
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Frame = +3
Query: 780 IRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTFT-------IVLDGFCKVGRT 938
+R+ SL+ L +LEE +++ D+ ++ +Y + + L K T
Sbjct: 6 LRSCGSLLPEL----KLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPT 61
Query: 939 EDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSI 1118
D +A E+A + P TY L+ +C G++ A +L M D P + FS
Sbjct: 62 -DFLAKMEEA---NIQPNRVTYQRLIASYCNVGDIEGASKILGFM-KTKDLPVTEAVFSA 116
Query: 1119 VLPALLRAGEVSAAWKTFKRMEHAGFE 1199
++ RAG++ A M AG E
Sbjct: 117 LVTGHARAGDMENAENILTVMRDAGIE 143
>Q10451:YLE1_SCHPO Uncharacterized protein C1093.01 - Schizosaccharomyces pombe (Fission|
yeast)
Length = 1261
Score = 53.5 bits (127), Expect = 3e-06
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 8/180 (4%)
Frame = +3
Query: 564 PDAHSFAIAVQCFCRKGAPDEAKETL---DEMVARGYLPSVSAFSAVVGCLCKRGRVTRA 734
P A +FA + R+G D+A L +E PSV ++AV+ L + R T
Sbjct: 886 PRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTEC 945
Query: 735 MEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTF-TIVL 911
++F M+ G PT TY ++I C +G A L ++++ P + + T++
Sbjct: 946 WKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQ 1005
Query: 912 DGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLN--GHCKEGNL--LKAYDLLMEMCD 1079
+ E A+ + + P+ TY L++ G K N+ +KA LME D
Sbjct: 1006 FEVQTMFNREKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTD 1065
Score = 47.8 bits (112), Expect = 2e-04
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
Frame = +3
Query: 642 DEMVARGYLPSVSAFSAVVGCLCKRG---RVTRAMEVFDTMRSVGSEPTIRTYNSLIGGL 812
D M GY+P S F+ ++ +RG T A+ +F+ + +P++ YN+++ L
Sbjct: 877 DNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKL 936
Query: 813 CYVGRLEEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIF-EDAIRLGLSP 989
R E L ++K+S + T+ V++ C++G A +F E + P
Sbjct: 937 GRARRTTECWKLFQEMKESGLLPTSV-TYGTVINAACRIGDESLAEKLFAEMENQPNYQP 995
Query: 990 TIFTYNALLNGHCKE-GNLLKAYDLLMEMCDNDDCPPDKISFSIVLPAL-----LRAGEV 1151
+ YN ++ + N KA +C D P ++ +++ A + G V
Sbjct: 996 RVAPYNTMIQFEVQTMFNREKALFYYNRLCAT-DIEPSSHTYKLLMDAYGTLKPVNVGSV 1054
Query: 1152 SAAWKTFKRME 1184
A + +R +
Sbjct: 1055 KAVLELMERTD 1065
Score = 37.4 bits (85), Expect = 0.23
Identities = 69/326 (21%), Positives = 119/326 (36%), Gaps = 45/326 (13%)
Frame = +3
Query: 831 EEARVLLNKLKDSPKQTADIYTFTIVLDGFC---KVGRTEDAMAIFEDAIR-LGLSPTIF 998
E ++ L K+ + A+ + ++LD R + +F D ++ LG P
Sbjct: 831 EHSKHLYRKISTKSLEKANWF-MALILDAMILSSSFARQFKSSNLFCDNMKMLGYIPRAS 889
Query: 999 TYNALLNGHCKEGNLLKAYDLL--MEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTF 1172
T+ L+N + G+ A L E + P ++ VL L RA + WK F
Sbjct: 890 TFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLF 949
Query: 1173 KRMEHAGFEADSRALDTLARGLCR-------------------------------QCAAD 1259
+ M+ +G S T+ CR Q
Sbjct: 950 QEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQ 1009
Query: 1260 ISVLRE-AKEVFGKVVAAGHEPVSYTYCLMAQALA--RGGEVDAAVAILDDMVRKGYALR 1430
RE A + ++ A EP S+TY L+ A + V + A+L+ M R +
Sbjct: 1010 TMFNREKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPIL 1069
Query: 1431 KRAYTDVVRALCD-----RSRTYDALRVLAVVIAKDFVPGRNAFDALLEELSRQGRWPDA 1595
Y + L + ++ T + LA A + N F + +E L R +
Sbjct: 1070 SMHYAAYIHILGNVVSDVQAATSCYMNALAKHDAGEIQLDANLFQSQIESLIANDRIVEG 1129
Query: 1596 MAVYAAAVKRGVVVSLKRHVKEALAR 1673
+ + + +KR VSL ++ AL +
Sbjct: 1130 IQI-VSDMKR-YNVSLNAYIVNALIK 1153
>Q8DII3:GCSP_SYNEL Glycine dehydrogenase [decarboxylating] - Synechococcus elongatus|
(Thermosynechococcus elongatus)
Length = 954
Score = 32.3 bits (72), Expect = 7.3
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Frame = +3
Query: 1341 LMAQALARGGEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAK 1520
L A+A +D A A + M A R+R + A +T LR A+ +
Sbjct: 142 LTGLAIANASLLDEATAAAEAMTLSFNACRQRGANRFLVAQDCHPQTLAVLRTRALPLGI 201
Query: 1521 DFVP---------GRNAFDALLEELSRQGRWPDAMAVYAAAVKRGVVVSL 1643
VP NAF LL+ + G A+ AAA +RG++V++
Sbjct: 202 QIVPIDPIAGELPWENAFGLLLQYPASDGAVRSPQALIAAAHERGLLVTV 251
Database: uniprot_sprot.fasta.out
Posted date: Jul 19, 2007 5:58 PM
Number of letters in database: 100,686,439
Number of sequences in database: 274,295
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 305,229,842
Number of extensions: 6596439
Number of successful extensions: 24415
Number of sequences better than 10.0: 15
Number of HSP's gapped: 24305
Number of HSP's successfully gapped: 28
Length of query: 652
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 532
Effective length of database: 67,771,039
Effective search space: 36054192748
Effective search space used: 36054192748
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)