ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf32m10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q76C99:RF1_ORYSA Rf1 protein, mitochondrial precursor - Oryza sa... 157 2e-37
2P0C043:Y4791_ARATH Putative PPR-repeat protein At4g17915 - Arabi... 110 2e-23
3P42704:LPPRC_HUMAN 130 kDa leucine-rich protein - Homo sapiens (... 54 2e-06
4Q10451:YLE1_SCHPO Uncharacterized protein C1093.01 - Schizosacch... 54 3e-06
5Q6CIF3:AEP3_KLULA ATPase expression protein 3 - Kluyveromyces la... 45 0.001
6Q8C2E4:PTCD1_MOUSE Pentatricopeptide repeat protein 1 - Mus musc... 40 0.035
7Q5R655:PTCD1_PONPY Pentatricopeptide repeat protein 1 - Pongo py... 40 0.046
8Q8BKF1:RPOM_MOUSE DNA-directed RNA polymerase, mitochondrial pre... 37 0.23
9Q12089:AEP3_YEAST ATPase expression protein 3 - Saccharomyces ce... 37 0.30
10O75127:PTCD1_HUMAN Pentatricopeptide repeat protein 1 - Homo sap... 35 1.1
11Q8VC74:COX18_MOUSE Inner membrane protein COX18, mitochondrial p... 35 1.5
12O00411:RPOM_HUMAN DNA-directed RNA polymerase, mitochondrial pre... 34 1.9
13Q96480:P5CS_SOLLC Delta 1-pyrroline-5-carboxylate synthetase - S... 34 1.9
14P48237:YG3M_YEAST Uncharacterized protein YGR150C - Saccharomyce... 33 4.3
15Q8DII3:GCSP_SYNEL Glycine dehydrogenase [decarboxylating] - Syne... 32 7.3

>Q76C99:RF1_ORYSA Rf1 protein, mitochondrial precursor - Oryza sativa (Rice)|
          Length = 791
 Score =  157 bits (396), Expect = 2e-37
 Identities = 102/392 (26%), Positives = 185/392 (47%), Gaps = 2/392 (0%)
 Frame = +3

Query: 462  ISDYNDIISALARGGDYDSAVALFRAL--EPNGVVAPDAHSFAIAVQCFCRKGAPDEAKE 635
            +  YN ++  L        A+ L   +  +  G   PD  S+   +  F ++G  D+A  
Sbjct: 158  VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217

Query: 636  TLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLC 815
            T  EM+ RG LP V  +++++  LCK   + +AMEV +TM   G  P   TYNS++ G C
Sbjct: 218  TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277

Query: 816  YVGRLEEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTI 995
              G+ +EA   L K++ S     D+ T+++++D  CK GR  +A  IF+   + GL P I
Sbjct: 278  SSGQPKEAIGFLKKMR-SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336

Query: 996  FTYNALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFK 1175
             TY  LL G+  +G L++ + LL  M  N    PD   FSI++ A  + G+V  A   F 
Sbjct: 337  TTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPDHYVFSILICAYAKQGKVDQAMLVFS 395

Query: 1176 RMEHAGFEADSRALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLMAQA 1355
            +M   G   ++     +   LC+    + ++L      F +++  G  P +  Y  +   
Sbjct: 396  KMRQQGLNPNAVTYGAVIGILCKSGRVEDAML-----YFEQMIDEGLSPGNIVYNSLIHG 450

Query: 1356 LARGGEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAKDFVPG 1535
            L    + + A  ++ +M+ +G  L    +  ++ + C   R  ++ ++  +++     P 
Sbjct: 451  LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510

Query: 1536 RNAFDALLEELSRQGRWPDAMAVYAAAVKRGV 1631
               ++ L+      G+  +AM + +  V  G+
Sbjct: 511  VITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542



 Score =  146 bits (369), Expect = 3e-34
 Identities = 116/457 (25%), Positives = 190/457 (41%), Gaps = 69/457 (15%)
 Frame = +3

Query: 471  YNDIISALARGGDYDSAVALFRALEPNGVVAPDAHSFAIAVQCFCRKGAPDEAKETLDEM 650
            YN II+AL +    D A+ +   +  NGV+ PD  ++   +  +C  G P EA   L +M
Sbjct: 234  YNSIIAALCKAQAMDKAMEVLNTMVKNGVM-PDCMTYNSILHGYCSSGQPKEAIGFLKKM 292

Query: 651  VARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRL 830
             + G  P V  +S ++  LCK GR   A ++FD+M   G +P I TY +L+ G    G L
Sbjct: 293  RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352

Query: 831  EEARVLLNKLKDSPKQTADIYTFTIVLDGF------------------------------ 920
             E   LL+ +  +     D Y F+I++  +                              
Sbjct: 353  VEMHGLLDLMVRNGIHP-DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 921  -----CKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMCDND 1085
                 CK GR EDAM  FE  I  GLSP    YN+L++G C      +A +L++EM D  
Sbjct: 412  VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 1086 DC----------------------------------PPDKISFSIVLPALLRAGEVSAAW 1163
             C                                   P+ I+++ ++     AG++  A 
Sbjct: 472  ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 1164 KTFKRMEHAGFEADSRALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCL 1343
            K    M   G + ++    TL  G C+     IS + +A  +F ++ ++G  P   TY +
Sbjct: 532  KLLSGMVSVGLKPNTVTYSTLINGYCK-----ISRMEDALVLFKEMESSGVSPDIITYNI 586

Query: 1344 MAQALARGGEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAKD 1523
            + Q L +     AA  +   +   G  +    Y  ++  LC    T DAL++   +   D
Sbjct: 587  ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646

Query: 1524 FVPGRNAFDALLEELSRQGRWPDAMAVYAAAVKRGVV 1634
                   F+ +++ L + GR  +A  ++ A    G+V
Sbjct: 647  LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683



 Score =  146 bits (368), Expect = 3e-34
 Identities = 121/485 (24%), Positives = 207/485 (42%), Gaps = 47/485 (9%)
 Frame = +3

Query: 408  EERVKVLDLLQRDDAALTISDYNDIISALARGGDYDSAVALFRALEPNGV--VAPDAHSF 581
            E+   V D L R     +I   N  ++ +AR     +AV+ +  +   G   V PD  ++
Sbjct: 32   EDARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTY 90

Query: 582  AIAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRAME-VFDTMR 758
             I + C CR G  D     L  ++ +G+     AF+ ++  LC   R + AM+ V   M 
Sbjct: 91   GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 759  SVGSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPK--QTADIYTFTIVLDGF---- 920
             +G  P + +YN L+ GLC   R +EA  LL+ + D        D+ ++T V++GF    
Sbjct: 151  ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 921  -------------------------------CKVGRTEDAMAIFEDAIRLGLSPTIFTYN 1007
                                           CK    + AM +    ++ G+ P   TYN
Sbjct: 211  DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 1008 ALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRMEH 1187
            ++L+G+C  G   +A   L +M  +D   PD +++S+++  L + G    A K F  M  
Sbjct: 271  SILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 1188 AGFEADSRALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLMAQALARG 1367
             G + +     TL +G   + A     L E   +   +V  G  P  Y + ++  A A+ 
Sbjct: 330  RGLKPEITTYGTLLQGYATKGA-----LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384

Query: 1368 GEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAKDFVPGRNAF 1547
            G+VD A+ +   M ++G       Y  V+  LC   R  DA+     +I +   PG   +
Sbjct: 385  GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 1548 DALLEELSRQGRWPDAMAVYAAAVKRGVVVS-------LKRHVKEALARDQEKEEAWESP 1706
            ++L+  L    +W  A  +    + RG+ ++       +  H KE   R  E E+ +E  
Sbjct: 445  NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE--GRVIESEKLFELM 502

Query: 1707 AQLGV 1721
             ++GV
Sbjct: 503  VRIGV 507



 Score =  136 bits (343), Expect = 3e-31
 Identities = 110/438 (25%), Positives = 182/438 (41%), Gaps = 64/438 (14%)
 Frame = +3

Query: 405  MEERVKVLDLLQRDDAALTISDYNDIISALARGGDYDSAVALFRALEPNGVVAPDAHSFA 584
            ME R K+ D + +      I+ Y  ++   A  G       L   +  NG+  PD + F+
Sbjct: 318  MEAR-KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI-HPDHYVFS 375

Query: 585  IAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSV 764
            I +  + ++G  D+A     +M  +G  P+   + AV+G LCK GRV  AM  F+ M   
Sbjct: 376  ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435

Query: 765  GSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTED 944
            G  P    YNSLI GLC   + E A  L+ ++ D       I+ F  ++D  CK GR  +
Sbjct: 436  GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIE 494

Query: 945  AMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMC---------------- 1076
            +  +FE  +R+G+ P + TYN L+NG+C  G + +A  LL  M                 
Sbjct: 495  SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554

Query: 1077 ------------------DNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRMEHAGFEA 1202
                              ++    PD I+++I+L  L +    +AA + + R+  +G + 
Sbjct: 555  GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614

Query: 1203 DSRALDTLARGLCRQ-------------CAADISVLR-----------------EAKEVF 1292
            +    + +  GLC+              C  D+ +                   EAK++F
Sbjct: 615  ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674

Query: 1293 GKVVAAGHEPVSYTYCLMAQALARGGEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDR 1472
                + G  P  +TY LMA+ +   G ++    +   M   G  +       +VR L  R
Sbjct: 675  VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734

Query: 1473 SRTYDALRVLAVVIAKDF 1526
                 A   L+++  K F
Sbjct: 735  GEITRAGTYLSMIDEKHF 752



 Score =  103 bits (256), Expect = 3e-21
 Identities = 80/319 (25%), Positives = 142/319 (44%)
 Frame = +3

Query: 471  YNDIISALARGGDYDSAVALFRALEPNGVVAPDAHSFAIAVQCFCRKGAPDEAKETLDEM 650
            YN +I  L     ++ A  L   +   G+   +   F   +   C++G   E+++  + M
Sbjct: 444  YNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 651  VARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRL 830
            V  G  P+V  ++ ++   C  G++  AM++   M SVG +P   TY++LI G C + R+
Sbjct: 503  VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 831  EEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNA 1010
            E+A VL  ++ +S   + DI T+ I+L G  +  RT  A  ++      G    + TYN 
Sbjct: 563  EDALVLFKEM-ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621

Query: 1011 LLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRMEHA 1190
            +L+G CK      A  +   +C   D   +  +F+I++ ALL+ G    A   F      
Sbjct: 622  ILHGLCKNKLTDDALQMFQNLC-LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680

Query: 1191 GFEADSRALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLMAQALARGG 1370
            G   +      +A  +  Q      +L E  ++F  +   G    S     + + L + G
Sbjct: 681  GLVPNYWTYRLMAENIIGQ-----GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735

Query: 1371 EVDAAVAILDDMVRKGYAL 1427
            E+  A   L  +  K ++L
Sbjct: 736  EITRAGTYLSMIDEKHFSL 754



to top

>P0C043:Y4791_ARATH Putative PPR-repeat protein At4g17915 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 463

 Score =  110 bits (275), Expect = 2e-23
 Identities = 100/379 (26%), Positives = 166/379 (43%), Gaps = 1/379 (0%)
 Frame = +3

Query: 462  ISDYNDIISALARGGDYDSAVALFRALEPNGVVAPDAHSFAIAVQCFCRKGAPDEAKETL 641
            ++ YN +I+  AR    D  + LF  +   G+  PD  S+   + C+ + G  +EA   L
Sbjct: 83   VATYNSLIAGAARRLMLDHVLYLFDEMLEWGIY-PDLWSYNTLMCCYFKLGKHEEAFRVL 141

Query: 642  -DEMVARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCY 818
              ++   G  P    ++ ++  LCK G +  A+E+F  M+S   +P + TYN LI GLC 
Sbjct: 142  YKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQS-RFKPELMTYNILINGLCK 200

Query: 819  VGRLEEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIF 998
              R+  A+ +L +LK S   T +  T+T +L  + K  R    + +F +  R G +   +
Sbjct: 201  SRRVGTAKWMLTELKKSG-YTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGY 259

Query: 999  TYNALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKR 1178
             Y A+++   K G   +AY+ + E+        D +S++ +L    + G + A       
Sbjct: 260  AYFAVVSALIKTGRTKEAYEYMQELVRKGR-RHDIVSYNTLLNLYFKDGNLDAVDDLLGE 318

Query: 1179 MEHAGFEADSRALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLMAQAL 1358
            +E  G +AD      +  GL R         R A+E F  +   G      T   +   L
Sbjct: 319  IERRGMKADEYTHTIIVNGLLRT-----GQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGL 373

Query: 1359 ARGGEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAKDFVPGR 1538
             + G VD A+   + M  K     +  YT VV  LC   R   A ++L     K      
Sbjct: 374  CKAGHVDRAMRYFESMEVKD----EYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIKIPT 429

Query: 1539 NAFDALLEELSRQGRWPDA 1595
            +A  A+L  L   G + +A
Sbjct: 430  SARRAVLSGLRMSGCYGEA 448



 Score = 96.7 bits (239), Expect = 3e-19
 Identities = 76/323 (23%), Positives = 149/323 (46%), Gaps = 16/323 (4%)
 Frame = +3

Query: 672  SVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRLEEARVLL 851
            S    +  V  LCK  ++ +A  +      +G +P + TYN+LI G C    +EEA  + 
Sbjct: 12   STRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVT 71

Query: 852  NKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCK 1031
             +++D+  +  D+ T+  ++ G  +    +  + +F++ +  G+ P +++YN L+  + K
Sbjct: 72   RRMRDAGIR-PDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFK 130

Query: 1032 EGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRMEHAGFEADSR 1211
             G   +A+ +L +        P   +++++L AL + G +  A + FK M+ + F+ +  
Sbjct: 131  LGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQ-SRFKPELM 189

Query: 1212 ALDTLARGLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLMAQALARGGEVDAAVA 1391
              + L  GLC+        +  AK +  ++  +G+ P + TY  + +   +   +   + 
Sbjct: 190  TYNILINGLCKS-----RRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQ 244

Query: 1392 ILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAKD---------------F 1526
            +  +M R+GY     AY  VV AL    RT +A   +  ++ K                F
Sbjct: 245  LFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYF 304

Query: 1527 VPGR-NAFDALLEELSRQGRWPD 1592
              G  +A D LL E+ R+G   D
Sbjct: 305  KDGNLDAVDDLLGEIERRGMKAD 327



 Score = 95.5 bits (236), Expect = 7e-19
 Identities = 70/308 (22%), Positives = 136/308 (44%)
 Frame = +3

Query: 558  VAPDAHSFAIAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRAM 737
            V PD  ++   +  +CR    +EA      M   G  P V+ +++++    +R  +   +
Sbjct: 44   VDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVL 103

Query: 738  EVFDTMRSVGSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTFTIVLDG 917
             +FD M   G  P + +YN+L+     +G+ EEA  +L K            T+ ++LD 
Sbjct: 104  YLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDA 163

Query: 918  FCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMCDNDDCPP 1097
             CK G  ++A+ +F++ ++    P + TYN L+NG CK   +  A  +L E+       P
Sbjct: 164  LCKCGYIDNALELFKE-MQSRFKPELMTYNILINGLCKSRRVGTAKWMLTEL-KKSGYTP 221

Query: 1098 DKISFSIVLPALLRAGEVSAAWKTFKRMEHAGFEADSRALDTLARGLCRQCAADISVLRE 1277
            + ++++ +L    +   +    + F  M+  G+  D  A   +   L +         +E
Sbjct: 222  NAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIK-----TGRTKE 276

Query: 1278 AKEVFGKVVAAGHEPVSYTYCLMAQALARGGEVDAAVAILDDMVRKGYALRKRAYTDVVR 1457
            A E   ++V  G      +Y  +     + G +DA   +L ++ R+G    +  +T +V 
Sbjct: 277  AYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVN 336

Query: 1458 ALCDRSRT 1481
             L    +T
Sbjct: 337  GLLRTGQT 344



 Score = 86.7 bits (213), Expect = 3e-16
 Identities = 64/279 (22%), Positives = 129/279 (46%), Gaps = 1/279 (0%)
 Frame = +3

Query: 585  IAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSV 764
            I V   C+    ++A+  + + +  G  P V  ++ ++   C+   +  A  V   MR  
Sbjct: 18   ICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDA 77

Query: 765  GSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTED 944
            G  P + TYNSLI G      L+    L +++ +      D++++  ++  + K+G+ E+
Sbjct: 78   GIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIY-PDLWSYNTLMCCYFKLGKHEE 136

Query: 945  AM-AIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIV 1121
            A   +++D    GL+P   TYN LL+  CK G +  A +L  EM       P+ ++++I+
Sbjct: 137  AFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEM--QSRFKPELMTYNIL 194

Query: 1122 LPALLRAGEVSAAWKTFKRMEHAGFEADSRALDTLARGLCRQCAADISVLREAKEVFGKV 1301
            +  L ++  V  A      ++ +G+  ++    T+ +   +        +R   ++F ++
Sbjct: 195  INGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFK-----TRRIRRGLQLFLEM 249

Query: 1302 VAAGHEPVSYTYCLMAQALARGGEVDAAVAILDDMVRKG 1418
               G+    Y Y  +  AL + G    A   + ++VRKG
Sbjct: 250  KREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKG 288



 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 66/282 (23%), Positives = 118/282 (41%), Gaps = 20/282 (7%)
 Frame = +3

Query: 903  IVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMCDN 1082
            I +D  CK  + E A ++  D IRLG+ P + TYN L++G+C+   + +AY +   M D 
Sbjct: 18   ICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRD- 76

Query: 1083 DDCPPDKISFSIVLPALLRAGEVSAAWKTFKRMEHAGFEADSRALDTLARGLCRQCAADI 1262
                PD  +++ ++    R   +      F  M   G   D  + +TL   +C  C   +
Sbjct: 77   AGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTL---MC--CYFKL 131

Query: 1263 SVLREAKEVFGK-VVAAGHEPVSYTYCLMAQALARGGEVDAAVAILDDMVRKGYALRKRA 1439
                EA  V  K +  AG  P   TY ++  AL + G +D A+ +  +M +  +      
Sbjct: 132  GKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEM-QSRFKPELMT 190

Query: 1440 YTDVVRALCDRSRTYDALRVLAVVIAKDFVPGRNAFDALLE----------------ELS 1571
            Y  ++  LC   R   A  +L  +    + P    +  +L+                E+ 
Sbjct: 191  YNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMK 250

Query: 1572 RQGRWPDAMAVYA---AAVKRGVVVSLKRHVKEALARDQEKE 1688
            R+G   D  A +A   A +K G       +++E + + +  +
Sbjct: 251  REGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHD 292



to top

>P42704:LPPRC_HUMAN 130 kDa leucine-rich protein - Homo sapiens (Human)|
          Length = 1273

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 4/191 (2%)
 Frame = +3

Query: 372 RDCARRIMSLPMEERV----KVLDLLQRDDAALTISDYNDIISALARGGDYDSAVALFRA 539
           R C   +  L +EER     ++ D LQ+  A   +S YN ++    +  +Y  +   F A
Sbjct: 7   RSCGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQN-EYKFSPTDFLA 65

Query: 540 LEPNGVVAPDAHSFAIAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRG 719
                 + P+  ++   +  +C  G  + A + L  M  +    + + FSA+V    + G
Sbjct: 66  KMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAG 125

Query: 720 RVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTF 899
            +  A  +   MR  G EP   TY +L+      G ++  +  L K++       D    
Sbjct: 126 DMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLL 185

Query: 900 TIVLDGFCKVG 932
            I+   F K G
Sbjct: 186 QIIF-SFSKAG 195



 Score = 44.7 bits (104), Expect = 0.001
 Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
 Frame = +3

Query: 720  RVTRAMEVFDTMRSVGSEPTIRTYNSLI----------GGLCYVGRLEEARVLLNKLKDS 869
            R   A  ++DT++ +G+   +  YN+L+              ++ ++EEA +  N++   
Sbjct: 21   RTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRV--- 77

Query: 870  PKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLK 1049
                    T+  ++  +C VG  E A  I        L  T   ++AL+ GH + G++  
Sbjct: 78   --------TYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMEN 129

Query: 1050 AYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRME 1184
            A ++L  M D     P   ++  +L A    G++    +T +++E
Sbjct: 130  AENILTVMRD-AGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVE 173



 Score = 34.3 bits (77), Expect = 1.9
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
 Frame = +3

Query: 780  IRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTFT-------IVLDGFCKVGRT 938
            +R+  SL+  L    +LEE     +++ D+ ++   +Y  +       + L    K   T
Sbjct: 6    LRSCGSLLPEL----KLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPT 61

Query: 939  EDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSI 1118
             D +A  E+A    + P   TY  L+  +C  G++  A  +L  M    D P  +  FS 
Sbjct: 62   -DFLAKMEEA---NIQPNRVTYQRLIASYCNVGDIEGASKILGFM-KTKDLPVTEAVFSA 116

Query: 1119 VLPALLRAGEVSAAWKTFKRMEHAGFE 1199
            ++    RAG++  A      M  AG E
Sbjct: 117  LVTGHARAGDMENAENILTVMRDAGIE 143



to top

>Q10451:YLE1_SCHPO Uncharacterized protein C1093.01 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 1261

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 8/180 (4%)
 Frame = +3

Query: 564  PDAHSFAIAVQCFCRKGAPDEAKETL---DEMVARGYLPSVSAFSAVVGCLCKRGRVTRA 734
            P A +FA  +    R+G  D+A   L   +E       PSV  ++AV+  L +  R T  
Sbjct: 886  PRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTEC 945

Query: 735  MEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRLEEARVLLNKLKDSPKQTADIYTF-TIVL 911
             ++F  M+  G  PT  TY ++I   C +G    A  L  ++++ P     +  + T++ 
Sbjct: 946  WKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQ 1005

Query: 912  DGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLN--GHCKEGNL--LKAYDLLMEMCD 1079
                 +   E A+  +       + P+  TY  L++  G  K  N+  +KA   LME  D
Sbjct: 1006 FEVQTMFNREKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTD 1065



 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
 Frame = +3

Query: 642  DEMVARGYLPSVSAFSAVVGCLCKRG---RVTRAMEVFDTMRSVGSEPTIRTYNSLIGGL 812
            D M   GY+P  S F+ ++    +RG     T A+ +F+  +    +P++  YN+++  L
Sbjct: 877  DNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKL 936

Query: 813  CYVGRLEEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIF-EDAIRLGLSP 989
                R  E   L  ++K+S      + T+  V++  C++G    A  +F E   +    P
Sbjct: 937  GRARRTTECWKLFQEMKESGLLPTSV-TYGTVINAACRIGDESLAEKLFAEMENQPNYQP 995

Query: 990  TIFTYNALLNGHCKE-GNLLKAYDLLMEMCDNDDCPPDKISFSIVLPAL-----LRAGEV 1151
             +  YN ++    +   N  KA      +C   D  P   ++ +++ A      +  G V
Sbjct: 996  RVAPYNTMIQFEVQTMFNREKALFYYNRLCAT-DIEPSSHTYKLLMDAYGTLKPVNVGSV 1054

Query: 1152 SAAWKTFKRME 1184
             A  +  +R +
Sbjct: 1055 KAVLELMERTD 1065



 Score = 37.4 bits (85), Expect = 0.23
 Identities = 69/326 (21%), Positives = 119/326 (36%), Gaps = 45/326 (13%)
 Frame = +3

Query: 831  EEARVLLNKLKDSPKQTADIYTFTIVLDGFC---KVGRTEDAMAIFEDAIR-LGLSPTIF 998
            E ++ L  K+     + A+ +   ++LD         R   +  +F D ++ LG  P   
Sbjct: 831  EHSKHLYRKISTKSLEKANWF-MALILDAMILSSSFARQFKSSNLFCDNMKMLGYIPRAS 889

Query: 999  TYNALLNGHCKEGNLLKAYDLL--MEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTF 1172
            T+  L+N   + G+   A   L   E     +  P    ++ VL  L RA   +  WK F
Sbjct: 890  TFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLF 949

Query: 1173 KRMEHAGFEADSRALDTLARGLCR-------------------------------QCAAD 1259
            + M+ +G    S    T+    CR                               Q    
Sbjct: 950  QEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQ 1009

Query: 1260 ISVLRE-AKEVFGKVVAAGHEPVSYTYCLMAQALA--RGGEVDAAVAILDDMVRKGYALR 1430
                RE A   + ++ A   EP S+TY L+  A    +   V +  A+L+ M R    + 
Sbjct: 1010 TMFNREKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPIL 1069

Query: 1431 KRAYTDVVRALCD-----RSRTYDALRVLAVVIAKDFVPGRNAFDALLEELSRQGRWPDA 1595
               Y   +  L +     ++ T   +  LA   A +     N F + +E L    R  + 
Sbjct: 1070 SMHYAAYIHILGNVVSDVQAATSCYMNALAKHDAGEIQLDANLFQSQIESLIANDRIVEG 1129

Query: 1596 MAVYAAAVKRGVVVSLKRHVKEALAR 1673
            + +  + +KR   VSL  ++  AL +
Sbjct: 1130 IQI-VSDMKR-YNVSLNAYIVNALIK 1153



to top

>Q6CIF3:AEP3_KLULA ATPase expression protein 3 - Kluyveromyces lactis (Yeast) (Candida|
            sphaerica)
          Length = 593

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 14/249 (5%)
 Frame = +3

Query: 666  LPSVSAFSAVVGCLCKRGRVTRAMEVFDTMRSVGSEPTIRTYNSLIGGLCYVGRL----- 830
            L + S F+ V+     +       E++  M+S G  P ++TYN ++  L    RL     
Sbjct: 210  LKTASVFNDVIYYYGNKNNFATCRELYAQMKSEGIAPNVQTYNLMLRNLLRNSRLIKQQL 269

Query: 831  --EEARVLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIF-EDAIRLGLSPTIFT 1001
               EA   L ++K     +AD+ T+         + +   + AIF E  +  G+     T
Sbjct: 270  PYREAIFYLERMKKE-NISADVITWNTCYF----LLKDNISRAIFLEKMVERGVP---LT 321

Query: 1002 YNALLNGHCKEGNLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAWKTFKRM 1181
            Y+ LL G  +E ++   ++++++    +D P D     I   +L++  +  A+WK  +  
Sbjct: 322  YH-LLYGILEEEDI--PFNVIIDFLRENDIPVDTKIIKICHRSLIKRDKFQASWKLMEYA 378

Query: 1182 EHAGFEA-DSRALDTLAR-----GLCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCL 1343
             H  F   D   L+   R     G    C   ++  +   EV         EP  + Y L
Sbjct: 379  RHLNFRVKDPFFLEEYLRQFSEKGRMDMCIMTVNTFKATFEV---------EPTLHCYDL 429

Query: 1344 MAQALARGG 1370
            + + L R G
Sbjct: 430  LFKCLVRQG 438



to top

>Q8C2E4:PTCD1_MOUSE Pentatricopeptide repeat protein 1 - Mus musculus (Mouse)|
          Length = 695

 Score = 40.0 bits (92), Expect = 0.035
 Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
 Frame = +3

Query: 822  GRLEEARVLLNK--LKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTI 995
            G+L EA  L  +  LK+   Q  +   +T+++ G  +VG  + A  +F D  +  L P+ 
Sbjct: 148  GKLAEALDLFERQMLKEERLQPLEC-NYTVLIGGCGRVGYLKKAFRLFNDMKKRDLEPSD 206

Query: 996  FTYNALLNGHCKEG----NLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAW 1163
             TY AL N  C E     + L++   L +     +   +  ++  +L    +  ++    
Sbjct: 207  ATYTALFN-VCAESPWKDSALQSALKLRQQLQARNFQLNLKTYHALLKVAAKCADLRLCL 265

Query: 1164 KTFKRMEHAGFEADSRALDTLARGLCRQCAADISV-LREAKEVFGKVVAAGHEPVSYTYC 1340
              FK +   G          L  G    C  D     R+A +V+ ++++ G +P  + Y 
Sbjct: 266  DVFKEIIQRGHAVTEETFCFLLVG----CIQDKKTGFRQAMQVWRQMLSLGIKPSRHGYN 321

Query: 1341 LMAQALARGGEVDAAVA 1391
            L+ +A    G  D  VA
Sbjct: 322  LLLEAARDCGLGDPEVA 338



to top

>Q5R655:PTCD1_PONPY Pentatricopeptide repeat protein 1 - Pongo pygmaeus (Orangutan)|
          Length = 698

 Score = 39.7 bits (91), Expect = 0.046
 Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
 Frame = +3

Query: 891  YTFTIVLDGFCKVGRTEDAMAIFEDAI--RLGLSPTIFTYNALLNGHCKEGNLLKAYDLL 1064
            Y + +      K G+  +A+ +FE  +     L P    Y AL+ G  + G L KA+ L 
Sbjct: 135  YWYFLQCKRLIKEGKLVEALDLFERQMLKEERLQPMESNYTALIGGCGRVGYLKKAFSLY 194

Query: 1065 MEMCDNDDCPPD---KISFSIVLPALLRAGEVSAAWKTFKRMEHAGFEADSRALDTLARG 1235
             +M   D  P D      F++   +  +   + +A K  ++++   FE + +    L + 
Sbjct: 195  NQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLK- 253

Query: 1236 LCRQCAADISVLREAKEVFGKVVAAGHEPVSYTYCLM 1346
                 AA  + LR   +VF +++  GH     T+  +
Sbjct: 254  ----MAAKCADLRMCLDVFKEIIHKGHVVTEETFSFL 286



to top

>Q8BKF1:RPOM_MOUSE DNA-directed RNA polymerase, mitochondrial precursor - Mus musculus|
           (Mouse)
          Length = 1207

 Score = 37.4 bits (85), Expect = 0.23
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +3

Query: 456 LTISDYNDIISALARGGDYDSAVALFRALEPNGVVAPDAHSFAIAVQCFCRKGAPDEA-K 632
           LT+  YN ++   AR G +   V +F  L+  G+ +PD  S+A A+QC  R+       +
Sbjct: 231 LTLHMYNTVMLGWARKGSFRELVYVFLMLKDAGL-SPDLCSYAAALQCMGRRDQDVRTIQ 289

Query: 633 ETLDEMVARGYLPSV 677
             L +M+  G+ P +
Sbjct: 290 RCLKQMMEEGFQPQL 304



to top

>Q12089:AEP3_YEAST ATPase expression protein 3 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 606

 Score = 37.0 bits (84), Expect = 0.30
 Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 17/248 (6%)
 Frame = +3

Query: 738  EVFDTMRSVGSEPTIRTYNSLIGGLCYVGRL-------EEARVLLNKLKDSPKQTADIYT 896
            E+F  M++ G++P   T+N L+  +     +       +E    L  +++     AD+ T
Sbjct: 242  EIFAQMKAEGTKPNTITFNLLLRNVVKNSHIRKTKHPDDEVLFYLRSMRNH-GVFADVIT 300

Query: 897  FTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTIFTYNALLNGHCKEGNLLKAYDLLMEMC 1076
            +T   + F +       + I +    LG     F Y  L NG        +A D L  + 
Sbjct: 301  WTTCYN-FLR-DEVSRQLYIVQMGEHLGNFNVNFVYTVLRNGD------YRAEDCLKVLA 352

Query: 1077 DNDDCPPDKISFSIVLPALLRAGEVSAAWKT----FKRMEHAGFEADSRALDTLARGLCR 1244
             N   P  + +F + +  LL   ++  A K     F+ ++ + F+ DS A++   R    
Sbjct: 353  AN-SLPISRKTFYLCIERLLNEEQLETASKLLDYGFQHLK-SNFKLDSEAMNHFMRVFAN 410

Query: 1245 QCAADISVL--REAKEVFGKVVAAGHEPVSYTYCLMAQALARGGEVDAAVAIL----DDM 1406
            +  +D++ L     ++++ K+     +P S T+ ++ +AL R G      A+L    D  
Sbjct: 411  KGRSDLAFLCYNTCRKIY-KI-----KPDSQTFEMLFKALVRNGNTKNFGAVLQYIKDLK 464

Query: 1407 VRKGYALR 1430
            V +G+ LR
Sbjct: 465  VSEGFGLR 472



to top

>O75127:PTCD1_HUMAN Pentatricopeptide repeat protein 1 - Homo sapiens (Human)|
          Length = 700

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 7/197 (3%)
 Frame = +3

Query: 822  GRLEEARVLLNK--LKDSPKQTADIYTFTIVLDGFCKVGRTEDAMAIFEDAIRLGLSPTI 995
            G+L EA  L  +  LK+   Q  +   +T+++ G  +VG  + A  ++    +  L P+ 
Sbjct: 150  GKLVEALDLFERQMLKEERLQPMES-NYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSD 208

Query: 996  FTYNALLNGHCKEG----NLLKAYDLLMEMCDNDDCPPDKISFSIVLPALLRAGEVSAAW 1163
             TY AL N  C E     + L++   L +     +   +  ++  +L    +  ++    
Sbjct: 209  ATYTALFN-VCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCL 267

Query: 1164 KTFKRMEHAGFEADSRALDTLARGLCRQCAADISV-LREAKEVFGKVVAAGHEPVSYTYC 1340
              FK + H G          L  G    C  D     R A +V+  +++ G +P   +Y 
Sbjct: 268  DVFKEIIHKGHVVTEETFSFLLMG----CIQDKKTGFRYALQVWRLMLSLGLQPSRDSYN 323

Query: 1341 LMAQALARGGEVDAAVA 1391
            L+  A    G  D  VA
Sbjct: 324  LLLVAARDCGLGDPQVA 340



to top

>Q8VC74:COX18_MOUSE Inner membrane protein COX18, mitochondrial precursor - Mus|
           musculus (Mouse)
          Length = 331

 Score = 34.7 bits (78), Expect = 1.5
 Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +1

Query: 544 SPTAWLRQTPTLS-PSPCSASAGXXXXXXXXXXXXXXXXXVTSPAFLPSLPSWAASANVD 720
           S   WLR  PTL  P+P S  A                    S A LP+LP WAA++   
Sbjct: 5   SCAGWLRSLPTLRLPAPRSPPAW-------------------SSARLPALPVWAAASVSA 45

Query: 721 ASPGPW 738
           ASPG W
Sbjct: 46  ASPGGW 51



to top

>O00411:RPOM_HUMAN DNA-directed RNA polymerase, mitochondrial precursor - Homo sapiens|
           (Human)
          Length = 1230

 Score = 34.3 bits (77), Expect = 1.9
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
 Frame = +3

Query: 378 CARRIMSLPMEERVKVLDLLQRDDAAL-TISDYNDIISALARGGDYDSAVALFRALEPNG 554
           C      LP+   + V+   QR    L T+  YN ++   AR G +   V +   ++  G
Sbjct: 232 CCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAG 291

Query: 555 VVAPDAHSFAIAVQCFCRKGAPDEAKETLDEMVARGYLPSVSAFSAVVGCLCKRGRVTRA 734
           +  PD  S+A A+QC  R+       E   E +++  L   + F+AV+     R  V +A
Sbjct: 292 LT-PDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRATVLKA 350

Query: 735 M 737
           +
Sbjct: 351 V 351



to top

>Q96480:P5CS_SOLLC Delta 1-pyrroline-5-carboxylate synthetase - Solanum lycopersicum|
           (Tomato) (Lycopersicon esculentum)
          Length = 717

 Score = 34.3 bits (77), Expect = 1.9
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
 Frame = +3

Query: 369 ARDCARRIMSLPMEERVKVL----DLLQRDDAALTISDYNDIISALARGGDYDSAVALFR 536
           AR C+RR+ +L  +ER K+L    D L+ ++ A+   +  D+++A   G  Y+ ++    
Sbjct: 302 ARACSRRLQALSSQERSKILQDIADALEANEKAILAENEADVVAAQQAG--YEKSLISRL 359

Query: 537 ALEPNGV 557
           AL P  +
Sbjct: 360 ALNPGKI 366



to top

>P48237:YG3M_YEAST Uncharacterized protein YGR150C - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 864

 Score = 33.1 bits (74), Expect = 4.3
 Identities = 16/80 (20%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = +3

Query: 558 VAPDAHSFAIAVQCFCRKGAPDEAKETLDEM--VARGYLPSVSAFSAVVGCLCKRGRVTR 731
           + P+  +    +Q + RK    +A  T D M  ++  + P +  ++ ++    K     +
Sbjct: 316 ITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFPK 375

Query: 732 AMEVFDTMRSVGSEPTIRTY 791
           A+++F  ++    +PT  TY
Sbjct: 376 ALDLFQEIQDHNIKPTTNTY 395



to top

>Q8DII3:GCSP_SYNEL Glycine dehydrogenase [decarboxylating] - Synechococcus elongatus|
            (Thermosynechococcus elongatus)
          Length = 954

 Score = 32.3 bits (72), Expect = 7.3
 Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
 Frame = +3

Query: 1341 LMAQALARGGEVDAAVAILDDMVRKGYALRKRAYTDVVRALCDRSRTYDALRVLAVVIAK 1520
            L   A+A    +D A A  + M     A R+R     + A     +T   LR  A+ +  
Sbjct: 142  LTGLAIANASLLDEATAAAEAMTLSFNACRQRGANRFLVAQDCHPQTLAVLRTRALPLGI 201

Query: 1521 DFVP---------GRNAFDALLEELSRQGRWPDAMAVYAAAVKRGVVVSL 1643
              VP           NAF  LL+  +  G      A+ AAA +RG++V++
Sbjct: 202  QIVPIDPIAGELPWENAFGLLLQYPASDGAVRSPQALIAAAHERGLLVTV 251


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 305,229,842
Number of extensions: 6596439
Number of successful extensions: 24415
Number of sequences better than 10.0: 15
Number of HSP's gapped: 24305
Number of HSP's successfully gapped: 28
Length of query: 652
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 532
Effective length of database: 67,771,039
Effective search space: 36054192748
Effective search space used: 36054192748
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top