ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf29j16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AY224424:Os08g0557400 330 1e-90
2AK060067:Os08g0557400 330 1e-90

>AY224424:Os08g0557400 |
          Length = 268
 Score =  330 bits (846), Expect = 1e-90
 Identities = 170/251 (67%), Positives = 187/251 (74%), Gaps = 8/251 (3%)
 Frame = +3

Query: 105 HPTARDPFKRRTTHPLVAATNRHVHGR--------TVTSLRQIHPRDHFANPPRPVFVXX 260
           +PT R P +RR   P + A +RH            + + L Q  PRD F NP        
Sbjct: 18  NPTTRYPVRRRVPRPPLVAASRHCTASPFPTTISISSSGLGQARPRDPFLNPRLRFAAAA 77

Query: 261 XXXXXXXXXXXXXXXXXXXXXKPFAVLFVCLGNICRSPAAEAVFRNLVSKRGLKSKFQID 440
                                KPF+VLFVCLGNICRSPAAEAVFRNLVSKRGL+SKF ID
Sbjct: 78  AAAEGEMAAEASAAAAEGAQAKPFSVLFVCLGNICRSPAAEAVFRNLVSKRGLESKFLID 137

Query: 441 SAGTIGYHEGNKADSRMISTSKKRGIEVTSISRPIKPSDFRIFDLILAMDRQNYEDILSS 620
           SAGTIGYHEGNKADSRM S SKKRGIEVTSISRP+KPSDFR FDLILAMDRQNYED+LSS
Sbjct: 138 SAGTIGYHEGNKADSRMRSASKKRGIEVTSISRPVKPSDFRDFDLILAMDRQNYEDLLSS 197

Query: 621 FDRWQHKETLPDSGPKKVKLMCSYCKRHTESEVPDPYYGGAKGFEKVLDLLEDACESLLD 800
           F+RW+H+E LPDSGPKKVKLMCSYCKRHTESEVPDPYYGG +GFEKVLDLLEDACESLLD
Sbjct: 198 FERWRHREPLPDSGPKKVKLMCSYCKRHTESEVPDPYYGGPQGFEKVLDLLEDACESLLD 257

Query: 801 SIMAENENISA 833
           SI+AEN ++SA
Sbjct: 258 SIVAENASVSA 268



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>AK060067:Os08g0557400 |
          Length = 268

 Score =  330 bits (846), Expect = 1e-90
 Identities = 170/251 (67%), Positives = 187/251 (74%), Gaps = 8/251 (3%)
 Frame = +3

Query: 105 HPTARDPFKRRTTHPLVAATNRHVHGR--------TVTSLRQIHPRDHFANPPRPVFVXX 260
           +PT R P +RR   P + A +RH            + + L Q  PRD F NP        
Sbjct: 18  NPTTRYPVRRRVPRPPLVAASRHCTASPFPTTISISSSGLGQARPRDPFLNPRLRFAAAA 77

Query: 261 XXXXXXXXXXXXXXXXXXXXXKPFAVLFVCLGNICRSPAAEAVFRNLVSKRGLKSKFQID 440
                                KPF+VLFVCLGNICRSPAAEAVFRNLVSKRGL+SKF ID
Sbjct: 78  AAAEGEMAAEASAAAAEGAQAKPFSVLFVCLGNICRSPAAEAVFRNLVSKRGLESKFLID 137

Query: 441 SAGTIGYHEGNKADSRMISTSKKRGIEVTSISRPIKPSDFRIFDLILAMDRQNYEDILSS 620
           SAGTIGYHEGNKADSRM S SKKRGIEVTSISRP+KPSDFR FDLILAMDRQNYED+LSS
Sbjct: 138 SAGTIGYHEGNKADSRMRSASKKRGIEVTSISRPVKPSDFRDFDLILAMDRQNYEDLLSS 197

Query: 621 FDRWQHKETLPDSGPKKVKLMCSYCKRHTESEVPDPYYGGAKGFEKVLDLLEDACESLLD 800
           F+RW+H+E LPDSGPKKVKLMCSYCKRHTESEVPDPYYGG +GFEKVLDLLEDACESLLD
Sbjct: 198 FERWRHREPLPDSGPKKVKLMCSYCKRHTESEVPDPYYGGPQGFEKVLDLLEDACESLLD 257

Query: 801 SIMAENENISA 833
           SI+AEN ++SA
Sbjct: 258 SIVAENASVSA 268


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 25,894,354
Number of extensions: 549193
Number of successful extensions: 1453
Number of sequences better than 10.0: 2
Number of HSP's gapped: 1449
Number of HSP's successfully gapped: 2
Length of query: 337
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 236
Effective length of database: 11,355,714
Effective search space: 2679948504
Effective search space used: 2679948504
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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