ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf27a19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1Os06g0670000:Os06g0670000 317 3e-86
2AK101993:Os09g0560800 60 1e-08
3AK105941:Os09g0560700 57 6e-08
4AK069278:Os09g0560700 57 6e-08
5Os12g0590900:Os12g0590900 33 1.3
6AK111994:Os05g0593800 32 2.8
7AK111911:Os05g0593800 32 2.8 
>Os06g0670000:Os06g0670000 |
          Length = 737
 Score =  317 bits (812), Expect = 3e-86
 Identities = 156/187 (83%), Positives = 166/187 (88%)
 Frame = +1

Query: 283 GTVAASIADIDFVQKRKSIEQVLEDGTISFLSIASLQHGFKIIEMLTTSAIARHTSSLAT 462
           GTVAASIADIDFVQKRK+IEQVLEDGTISFL+IASL+HGFKIIEMLTTSAI RHT+SLAT
Sbjct: 290 GTVAASIADIDFVQKRKNIEQVLEDGTISFLNIASLRHGFKIIEMLTTSAIERHTTSLAT 349

Query: 463 YVRXXXXXXXXXXXXXVCIIYGQEASKVADLKTSPTITFNLKREDGTWFGYREVEKLASL 642
           YVR             VC IYGQ+ SKV  LK  PTITFNLKREDG+WFGYREVEKLASL
Sbjct: 350 YVRNKMLDLKHSNEINVCTIYGQQYSKVEGLKMGPTITFNLKREDGSWFGYREVEKLASL 409

Query: 643 SGIHLRTGCFCNPGACAKYLGLSHSDLVSNFEAGHVCWDDNDVINGKPTGAVRISFGYIS 822
            GIHLRTGCFCNPGACAKYLGLSHSDLVSNFEAGHVCWDDND+INGKPTGAVRISFGY+S
Sbjct: 410 FGIHLRTGCFCNPGACAKYLGLSHSDLVSNFEAGHVCWDDNDIINGKPTGAVRISFGYMS 469

Query: 823 TYQDAEV 843
           T++DAEV
Sbjct: 470 TFEDAEV 476



 Score =  290 bits (742), Expect = 3e-78
 Identities = 149/231 (64%), Positives = 173/231 (74%), Gaps = 18/231 (7%)
 Frame = +1

Query: 1558 FHILQVPELGSIRTLINLELGKLFVESPKRKDKLQISLLENLTHLTAEMDVYGQRY---- 1725
            F   +VPELGSIRTLI+LELGKLF+ESP R+DKLQ+SLLE+L  L+ E+DV+GQRY    
Sbjct: 471  FEDAEVPELGSIRTLIDLELGKLFIESPTRRDKLQLSLLESLADLSEEVDVFGQRYDWII 530

Query: 1726 --------------KVESYDDKVNAWFSEAIGRHCTFMRCSSSKNSICTSTGKNGRLCRD 1863
                          +V+SYDD+VN WFSEAIGR CT +RCSSSK   CT TG   R CRD
Sbjct: 531  GCMLSNLTNHPFEYEVQSYDDRVNTWFSEAIGRPCTLVRCSSSKYRSCTYTGLRDRPCRD 590

Query: 1864 TRSKLSFVNEGQLLLISEEXXXXXXXXXXXXXXXXTQHVVVDAMRFRPNIVISGSTPYRE 2043
            T+SKL+FVNEGQLLLISEE                 Q + VDAMRFRPN+VISGS+PY E
Sbjct: 591  TQSKLNFVNEGQLLLISEESISDLNSRLNSGKGDCKQKLPVDAMRFRPNLVISGSSPYSE 650

Query: 2044 DNWKRLHIGDAYFTSMGGCNRCQMINLHQNAGQVIKSKEPLATLASYRREK 2196
            DNWK+L IG+A FTSMGGCNRCQMINLHQ++GQV+KSKEPLATLASYRR+K
Sbjct: 651  DNWKKLRIGEACFTSMGGCNRCQMINLHQDSGQVLKSKEPLATLASYRRKK 701
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>AK101993:Os09g0560800 |
          Length = 319

 Score = 59.7 bits (143), Expect = 1e-08
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
 Frame = +1

Query: 1996 RFRPNIVISGSTPYREDNWKRLHIGDAYFTSMGGCNRCQMINLHQNAGQVIKSKEPLATL 2175
            RFRPNI++ G  PY ED WK + IG   F  +  C+RC++  ++Q+ G  I  +EP   L
Sbjct: 202  RFRPNIIVDGCHPYSEDLWKTIKIGKLTFLGVKLCDRCKVPTINQDNG--IPGEEPTEAL 259

Query: 2176 ASYR---------REKGKILFGILLNYEDGLDGEEETVAERWLQVGQEVH 2298
             + R         + K ++ FG  L  ++ L  ++E    R ++VG  V+
Sbjct: 260  QALRSDEVLRPSHKNKRRVYFGQNLVCKESLSAKDE---GRIIKVGDPVY 306



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 23/56 (41%), Positives = 37/56 (66%)
 Frame = +1

Query: 1066 LQSIIIYPVKSCQGFSVQSWPLATGGLKYDREWLLQGSGGEILTQKKVTELFLLSV 1233
            ++SI++YP+KSC+G SV    + + GL++DR WL+  S G   TQ+   +L L+ V
Sbjct: 22   VKSIVVYPIKSCRGISVPQAAITSTGLRWDRPWLVMNSAGRAFTQRVEPKLALIEV 77
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>AK105941:Os09g0560700 |
          Length = 324

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 25/64 (39%), Positives = 41/64 (64%)
 Frame = +1

Query: 1054 PDVRLQSIIIYPVKSCQGFSVQSWPLATGGLKYDREWLLQGSGGEILTQKKVTELFLLSV 1233
            P   ++SI+IYP+KSC+G SV   P+ + G ++DR+W++  S G   TQ+   +L L+ V
Sbjct: 22   PAATVRSILIYPIKSCRGISVPQAPITSTGFRWDRQWVVVNSKGRAYTQRVEPKLALVEV 81

Query: 1234 CVQP 1245
             + P
Sbjct: 82   EMPP 85



 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 27/67 (40%), Positives = 39/67 (58%)
 Frame = +1

Query: 1996 RFRPNIVISGSTPYREDNWKRLHIGDAYFTSMGGCNRCQMINLHQNAGQVIKSKEPLATL 2175
            RFRPNI++ G  PY ED WK + I    F  +  CNRC++  ++Q  G  I   EP  TL
Sbjct: 207  RFRPNILVDGCHPYSEDLWKTIKINKLTFQGVKLCNRCKVPTINQENG--ILGTEPTETL 264

Query: 2176 ASYRREK 2196
             ++R ++
Sbjct: 265  LTFRSDE 271
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>AK069278:Os09g0560700 |
          Length = 324

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 25/64 (39%), Positives = 41/64 (64%)
 Frame = +1

Query: 1054 PDVRLQSIIIYPVKSCQGFSVQSWPLATGGLKYDREWLLQGSGGEILTQKKVTELFLLSV 1233
            P   ++SI+IYP+KSC+G SV   P+ + G ++DR+W++  S G   TQ+   +L L+ V
Sbjct: 22   PAATVRSILIYPIKSCRGISVPQAPITSTGFRWDRQWVVVNSKGRAYTQRVEPKLALVEV 81

Query: 1234 CVQP 1245
             + P
Sbjct: 82   EMPP 85



 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 27/67 (40%), Positives = 39/67 (58%)
 Frame = +1

Query: 1996 RFRPNIVISGSTPYREDNWKRLHIGDAYFTSMGGCNRCQMINLHQNAGQVIKSKEPLATL 2175
            RFRPNI++ G  PY ED WK + I    F  +  CNRC++  ++Q  G  I   EP  TL
Sbjct: 207  RFRPNILVDGCHPYSEDLWKTIKINKLTFQGVKLCNRCKVPTINQENG--ILGTEPTETL 264

Query: 2176 ASYRREK 2196
             ++R ++
Sbjct: 265  LTFRSDE 271
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>Os12g0590900:Os12g0590900 |
          Length = 908

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
 Frame = +1

Query: 571  ITFNLKREDGTWFGYREVEKLASLSGIHLRTGCFCNPGACAKYLGLSHSDLVSNFEAGHV 750
            + FN+K+ DGT+     V+K+A  +GI L  G   +       + L+H  L   F+    
Sbjct: 789  VAFNVKQSDGTFVNAEVVQKIAEKNGISLGIGFLSH-----IKVDLNHKQLNGAFDIPEA 843

Query: 751  CWDDNDVINGKP----TGAVRISFGYISTYQD 834
             +  N   + K        V  S G+++ ++D
Sbjct: 844  SFYKNGRKDSKKVTIRVEVVTASLGFLTNFED 875
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>AK111994:Os05g0593800 |
          Length = 473

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
 Frame = +3

Query: 1995 EISPQHRYL---WLDAIQRR--QLEEASHWRCLFYFHGWMQPLPDDQLAPECGPGDQVKG 2159
            E SP ++YL   + D   R   Q +    W  L Y    M   P   +AP  G    +  
Sbjct: 261  EDSPDYQYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQMTSAPPRAIAPATGQSSAMAP 320

Query: 2160 TASNASLLPTRKGKDSVW 2213
             A+N  L  T +G+ S W
Sbjct: 321  IANNNRLSATEEGRRSGW 338
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>AK111911:Os05g0593800 |
          Length = 473

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
 Frame = +3

Query: 1995 EISPQHRYL---WLDAIQRR--QLEEASHWRCLFYFHGWMQPLPDDQLAPECGPGDQVKG 2159
            E SP ++YL   + D   R   Q +    W  L Y    M   P   +AP  G    +  
Sbjct: 261  EDSPDYQYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQMTSAPPRAIAPATGQSSAMAP 320

Query: 2160 TASNASLLPTRKGKDSVW 2213
             A+N  L  T +G+ S W
Sbjct: 321  IANNNRLSATEEGRRSGW 338


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 64,830,486
Number of extensions: 1371187
Number of successful extensions: 3162
Number of sequences better than 10.0: 7
Number of HSP's gapped: 3160
Number of HSP's successfully gapped: 11
Length of query: 842
Length of database: 15,399,855
Length adjustment: 109
Effective length of query: 733
Effective length of database: 11,035,386
Effective search space: 8088937938
Effective search space used: 8088937938
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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