ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf26p04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001048873.1| Oryza sativa (japonica cultivar-group) Os01g0205300 (Os01g0205300) mRNA, complete cds Length = 411 Score = 73.8 bits (37), Expect = 1e-09 Identities = 82/97 (84%) Strand = Plus / Plus Query: 485 atgagggtgcctgagctgagggacatggcgagggagagggggatgagaggttactccaag 544 |||| |||| |||||||||| || ||||||||| ||| |||||| ||||||||| | | Sbjct: 310 atgaaggtggctgagctgagagaattggcgagggcgagaaggatgaaaggttactcgagg 369 Query: 545 ctgaagaaaggggagctgattgatcgtctgaggggtg 581 |||||||| | ||||||||||||||||||| ||||| Sbjct: 370 ctgaagaagagtgagctgattgatcgtctgaagggtg 406
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 73.8 bits (37), Expect = 1e-09 Identities = 82/97 (84%) Strand = Plus / Plus Query: 485 atgagggtgcctgagctgagggacatggcgagggagagggggatgagaggttactccaag 544 |||| |||| |||||||||| || ||||||||| ||| |||||| ||||||||| | | Sbjct: 5768102 atgaaggtggctgagctgagagaattggcgagggcgagaaggatgaaaggttactcgagg 5768161 Query: 545 ctgaagaaaggggagctgattgatcgtctgaggggtg 581 |||||||| | ||||||||||||||||||| ||||| Sbjct: 5768162 ctgaagaagagtgagctgattgatcgtctgaagggtg 5768198 Score = 61.9 bits (31), Expect = 4e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 102 aaatgggagcaattctcatgcagcatcaccaaatctctc 140 ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 5767295 aaatgggaggaattctcttgcagcatcaccaaatctctc 5767333
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 73.8 bits (37), Expect = 1e-09 Identities = 82/97 (84%) Strand = Plus / Plus Query: 485 atgagggtgcctgagctgagggacatggcgagggagagggggatgagaggttactccaag 544 |||| |||| |||||||||| || ||||||||| ||| |||||| ||||||||| | | Sbjct: 92804 atgaaggtggctgagctgagagaattggcgagggcgagaaggatgaaaggttactcgagg 92863 Query: 545 ctgaagaaaggggagctgattgatcgtctgaggggtg 581 |||||||| | ||||||||||||||||||| ||||| Sbjct: 92864 ctgaagaagagtgagctgattgatcgtctgaagggtg 92900 Score = 61.9 bits (31), Expect = 4e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 102 aaatgggagcaattctcatgcagcatcaccaaatctctc 140 ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 91997 aaatgggaggaattctcttgcagcatcaccaaatctctc 92035
>gb|AC004774.1| Homo sapiens BAC clone CTA-300E22 from 7, complete sequence Length = 161652 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Minus Query: 678 gacttttcttgcgtctgttgttttctt 704 |||||||||||| |||||||||||||| Sbjct: 87753 gacttttcttgcttctgttgttttctt 87727
>gb|AC078989.22| Homo sapiens Xp BAC RP11-769N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194715 Score = 46.1 bits (23), Expect = 0.22 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 81 ggcagaggaagaagag-agaagaaatgggag 110 |||||||||||||||| |||||||||||||| Sbjct: 129204 ggcagaggaagaagagaagaagaaatgggag 129174
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Minus Query: 476 ttggaggacatgagggtgcctg 497 |||||||||||||||||||||| Sbjct: 14807290 ttggaggacatgagggtgcctg 14807269
>gb|BT017297.1| Zea mays clone EL01N0315H07.c mRNA sequence Length = 879 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 tctccatcgcgctccacgacgg 220 |||||||||||||||||||||| Sbjct: 152 tctccatcgcgctccacgacgg 173
>gb|AY617598.1| Sterkiella histriomuscorum clone UGC1O0003_J06_F genomic sequence Length = 776 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 agaggaagaagagagaagaaat 105 |||||||||||||||||||||| Sbjct: 323 agaggaagaagagagaagaaat 302
>ref|NM_132757.1| Drosophila melanogaster CG12398-RA (CG12398), mRNA Length = 1902 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 ttggaggacatgagggtgcctg 497 |||||||||||||||||||||| Sbjct: 541 ttggaggacatgagggtgcctg 562
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 ggccatccaggccgccattgcc 355 |||||||||||||||||||||| Sbjct: 220922 ggccatccaggccgccattgcc 220943
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Minus Query: 800 gtactccctccctacctaaata 821 |||||||||||||||||||||| Sbjct: 26282119 gtactccctccctacctaaata 26282098
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 0.87 Identities = 31/34 (91%) Strand = Plus / Plus Query: 797 tttgtactccctccctacctaaataattgtagtt 830 |||||||||||||||| || |||||| ||||||| Sbjct: 29501457 tttgtactccctccctcccaaaataaatgtagtt 29501490
>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01, complete sequence Length = 186325 Score = 44.1 bits (22), Expect = 0.87 Identities = 31/34 (91%) Strand = Plus / Plus Query: 797 tttgtactccctccctacctaaataattgtagtt 830 |||||||||||||||| || |||||| ||||||| Sbjct: 174473 tttgtactccctccctcccaaaataaatgtagtt 174506
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 44.1 bits (22), Expect = 0.87 Identities = 31/34 (91%) Strand = Plus / Plus Query: 797 tttgtactccctccctacctaaataattgtagtt 830 |||||||||||||||| || |||||| ||||||| Sbjct: 4146 tttgtactccctccctcccaaaataaatgtagtt 4179
>gb|AC022344.2|AC022344 Drosophila melanogaster, chromosome X, region 12F-13A, BAC clone BACR30H22, complete sequence Length = 157308 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Minus Query: 476 ttggaggacatgagggtgcctg 497 |||||||||||||||||||||| Sbjct: 135732 ttggaggacatgagggtgcctg 135711
>emb|BX005385.13| Zebrafish DNA sequence from clone DKEY-180N16, complete sequence Length = 159174 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ggagctgattgatcgtctgagg 577 |||||||||||||||||||||| Sbjct: 129434 ggagctgattgatcgtctgagg 129413
>gb|AY110058.1| Zea mays CL9888_1 mRNA sequence Length = 1002 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Minus Query: 199 tctccatcgcgctccacgacgg 220 |||||||||||||||||||||| Sbjct: 802 tctccatcgcgctccacgacgg 781
>emb|BX005047.5| Zebrafish DNA sequence from clone DKEY-38N1 in linkage group 1, complete sequence Length = 141396 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ggagctgattgatcgtctgagg 577 |||||||||||||||||||||| Sbjct: 46010 ggagctgattgatcgtctgagg 45989
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Minus Query: 800 gtactccctccctacctaaata 821 |||||||||||||||||||||| Sbjct: 46103 gtactccctccctacctaaata 46082
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 372 cgcccgggaggacgaggaagccgtc 396 |||| |||||||||||||||||||| Sbjct: 2082993 cgccggggaggacgaggaagccgtc 2083017
>emb|CT833455.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA033M11, full insert sequence Length = 1087 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 36 agaggaagaagagagaagaaa 56
>ref|NM_001074980.1| Oryza sativa (japonica cultivar-group) Os11g0676800 (Os11g0676800) mRNA, complete cds Length = 2469 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 agaaatgggagcaattctcat 120 ||||||||||||||||||||| Sbjct: 1329 agaaatgggagcaattctcat 1349
>ref|NM_001074975.1| Oryza sativa (japonica cultivar-group) Os11g0673900 (Os11g0673900) mRNA, complete cds Length = 2898 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 agaaatgggagcaattctcat 120 ||||||||||||||||||||| Sbjct: 750 agaaatgggagcaattctcat 770
>ref|NM_001060940.1| Oryza sativa (japonica cultivar-group) Os05g0104800 (Os05g0104800) mRNA, complete cds Length = 1102 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 32 agaggaagaagagagaagaaa 52
>ref|XM_979451.1| PREDICTED: Mus musculus RIKEN cDNA 1700023I07 gene (1700023I07Rik), mRNA Length = 767 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 ggccatccaggccgccattgc 354 ||||||||||||||||||||| Sbjct: 115 ggccatccaggccgccattgc 95
>ref|XM_910715.2| PREDICTED: Mus musculus RIKEN cDNA 1700023I07 gene (1700023I07Rik), mRNA Length = 767 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 ggccatccaggccgccattgc 354 ||||||||||||||||||||| Sbjct: 115 ggccatccaggccgccattgc 95
>ref|XM_284686.5| PREDICTED: Mus musculus RIKEN cDNA 1700023I07 gene (1700023I07Rik), mRNA Length = 767 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 ggccatccaggccgccattgc 354 ||||||||||||||||||||| Sbjct: 115 ggccatccaggccgccattgc 95
>ref|NM_121555.2| Arabidopsis thaliana unknown protein (AT5G15510) mRNA, complete cds Length = 1675 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 ttggcagaggaagaagagagaagaa 103 ||||||||||||||||||| ||||| Sbjct: 1264 ttggcagaggaagaagagataagaa 1288
>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035J08, complete sequence Length = 117555 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 6412 agaggaagaagagagaagaaa 6392
>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0004D06, complete sequence Length = 157547 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 agaaatgggagcaattctcat 120 ||||||||||||||||||||| Sbjct: 73136 agaaatgggagcaattctcat 73156
>gb|AC117248.3| Mus musculus BAC clone RP24-345A14 from chromosome 9, complete sequence Length = 185810 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 127347 agaggaagaagagagaagaaa 127367
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0023F01, complete sequence Length = 145009 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 agaaatgggagcaattctcat 120 ||||||||||||||||||||| Sbjct: 128424 agaaatgggagcaattctcat 128404
>dbj|AK133428.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933427K18 product:hypothetical Protein phosphatase inhibitor 2 (IPP-2) containing protein, full insert sequence Length = 766 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 ggccatccaggccgccattgc 354 ||||||||||||||||||||| Sbjct: 116 ggccatccaggccgccattgc 96
>dbj|AK006280.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700023I07 product:weakly similar to PROTEIN PHOSPHATASE INHIBITOR 2 (IPP-2) [Rattus norvegicus], full insert sequence Length = 730 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 ggccatccaggccgccattgc 354 ||||||||||||||||||||| Sbjct: 118 ggccatccaggccgccattgc 98
>emb|CR956392.5| M.truncatula DNA sequence from clone MTH2-52P12 on chromosome 3, complete sequence Length = 115163 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 45698 agaggaagaagagagaagaaa 45718
>emb|CR700140.2|CNS0G36G Tetraodon nigroviridis full-length cDNA Length = 1074 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 aagctgaagaaaggggagctg 562 ||||||||||||||||||||| Sbjct: 695 aagctgaagaaaggggagctg 715
>emb|CR698658.2|CNS0G21A Tetraodon nigroviridis full-length cDNA Length = 837 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 aagctgaagaaaggggagctg 562 ||||||||||||||||||||| Sbjct: 485 aagctgaagaaaggggagctg 505
>emb|CR696558.2|CNS0G0EY Tetraodon nigroviridis full-length cDNA Length = 1088 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 aagctgaagaaaggggagctg 562 ||||||||||||||||||||| Sbjct: 739 aagctgaagaaaggggagctg 759
>emb|CR694020.2|CNS0FYGG Tetraodon nigroviridis full-length cDNA Length = 1064 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 aagctgaagaaaggggagctg 562 ||||||||||||||||||||| Sbjct: 712 aagctgaagaaaggggagctg 732
>emb|CR692582.3|CNS0FXCI Tetraodon nigroviridis full-length cDNA Length = 837 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 aagctgaagaaaggggagctg 562 ||||||||||||||||||||| Sbjct: 485 aagctgaagaaaggggagctg 505
>emb|CR692392.2|CNS0FX78 Tetraodon nigroviridis full-length cDNA Length = 1084 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 aagctgaagaaaggggagctg 562 ||||||||||||||||||||| Sbjct: 737 aagctgaagaaaggggagctg 757
>emb|CR686547.2|CNS0FSOV Tetraodon nigroviridis full-length cDNA Length = 1069 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 aagctgaagaaaggggagctg 562 ||||||||||||||||||||| Sbjct: 717 aagctgaagaaaggggagctg 737
>emb|CR684560.1|CNS0FR5O Tetraodon nigroviridis full-length cDNA Length = 1050 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 aagctgaagaaaggggagctg 562 ||||||||||||||||||||| Sbjct: 708 aagctgaagaaaggggagctg 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 agaaatgggagcaattctcat 120 ||||||||||||||||||||| Sbjct: 26372106 agaaatgggagcaattctcat 26372126 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 agaaatgggagcaattctcat 120 ||||||||||||||||||||| Sbjct: 26461296 agaaatgggagcaattctcat 26461316
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 801 tactccctccctacctaaataattg 825 |||||||||| |||||||||||||| Sbjct: 28105285 tactccctccatacctaaataattg 28105261
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 230892 agaggaagaagagagaagaaa 230872
>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project) Length = 90176 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 ttggcagaggaagaagagagaagaa 103 ||||||||||||||||||| ||||| Sbjct: 41954 ttggcagaggaagaagagataagaa 41978
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 tcttcattgacggtcagagca 259 ||||||||||||||||||||| Sbjct: 2487749 tcttcattgacggtcagagca 2487729
>gb|AC008632.6|AC008632 Homo sapiens chromosome 5 clone CTB-164N12, complete sequence Length = 112687 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 agaagagagaagaaatgggag 110 ||||||||||||||||||||| Sbjct: 90520 agaagagagaagaaatgggag 90500
>emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for putative aquaporin Length = 1291 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 812 tacctaaataattgtagttgggaag 836 |||||||||||||||||||| |||| Sbjct: 1190 tacctaaataattgtagttgagaag 1166
>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete sequence Length = 173386 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 gagggagagggggatgagagg 534 ||||||||||||||||||||| Sbjct: 85685 gagggagagggggatgagagg 85705
>gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome 7, complete sequence Length = 215193 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 697 gttttctttgttagatacagtatct 721 |||||||||||| |||||||||||| Sbjct: 101544 gttttctttgtttgatacagtatct 101520
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 801 tactccctccctacctaaataattg 825 |||||||||| |||||||||||||| Sbjct: 88581 tactccctccatacctaaataattg 88557
>gb|AC051643.5| Homo sapiens chromosome 15, clone RP11-615L8, complete sequence Length = 158682 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 84503 agaggaagaagagagaagaaa 84483
>dbj|AK104554.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F08, full insert sequence Length = 1071 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 27 agaggaagaagagagaagaaa 47
>dbj|AK104207.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-A12, full insert sequence Length = 1081 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 36 agaggaagaagagagaagaaa 56
>dbj|AK070215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043K07, full insert sequence Length = 1107 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 37 agaggaagaagagagaagaaa 57
>emb|AL928570.14| Mouse DNA sequence from clone RP23-183A10 on chromosome X, complete sequence Length = 91550 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 ggccatccaggccgccattgc 354 ||||||||||||||||||||| Sbjct: 9730 ggccatccaggccgccattgc 9710
>gb|AC018633.2|AC018633 Homo sapiens clone UWGC:djs1 or RP11-16G1 from 7p14-15, complete sequence Length = 169234 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 aggaagaagagagaagaaatg 106 ||||||||||||||||||||| Sbjct: 74547 aggaagaagagagaagaaatg 74527
>emb|AL163932.5|CNS05TBO Human chromosome 14 DNA sequence BAC R-61O1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170535 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 100039 agaggaagaagagagaagaaa 100019
>gb|AY940663.1| Mus musculus non-protein coding RNA-2 mRNA, complete sequence Length = 840 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 agctgaagaaaggggagctga 563 ||||||||||||||||||||| Sbjct: 292 agctgaagaaaggggagctga 312
>emb|AM039901.1| Hordeum vulgare partial mRNA for putative cytosine-5 DNA methyltransferase (met1 gene) Length = 1461 Score = 42.1 bits (21), Expect = 3.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 789 atggtctgtttgtactccctccctacctaaataattgtagttggg 833 |||||||| ||||||||||||| | || ||||| |||| |||||| Sbjct: 1350 atggtctgcttgtactccctccgttccaaaatagttgttgttggg 1394
>emb|CT010472.8| Mouse DNA sequence from clone RP23-37H11 on chromosome 13, complete sequence Length = 182622 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 tggcagaggaagaagagagaagaaa 104 |||||||||||| |||||||||||| Sbjct: 107195 tggcagaggaaggagagagaagaaa 107219
>emb|AL683814.10| Mouse DNA sequence from clone RP23-165L23 on chromosome 2, complete sequence Length = 191052 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 agctgaagaaaggggagctga 563 ||||||||||||||||||||| Sbjct: 120341 agctgaagaaaggggagctga 120361
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 agaggaagaagagagaagaaa 104 ||||||||||||||||||||| Sbjct: 113076 agaggaagaagagagaagaaa 113056 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 171,183,207 Number of extensions: 9577444 Number of successful extensions: 217112 Number of sequences better than 10.0: 65 Number of HSP's gapped: 217111 Number of HSP's successfully gapped: 68 Length of query: 912 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 889 Effective length of database: 18,503,978,556 Effective search space: 16450036936284 Effective search space used: 16450036936284 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
