ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf23m11 |
|---|---|
| Clone Library Name | barley_pub |
>Q55511:TIG_SYNY3 Trigger factor - Synechocystis sp. (strain PCC 6803)| Length = 471 Score = 55.5 bits (132), Expect = 3e-07 Identities = 34/129 (26%), Positives = 64/129 (49%) Frame = +1 Query: 337 KTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSIL 516 K + K D ++ L IE+P A++KV++ + L R +PGFRR K +P +I+ Sbjct: 2 KVTQEKLPDSQVGLEIEIPATASKKVYENVVKKLTRTV-NIPGFRRGK------VPRAIV 54 Query: 517 LSMLGKSRVTKFILQEILSVTVGDFVKKENLKVNPEIATTQSEGDLESSFAPGSSFGFNV 696 + LG+S + ++E++ ++ VK+E L + + +L F P + V Sbjct: 55 IQRLGQSYIKATAIEELIDDSIKAAVKQEELPIIGNFSLRSDMENLIQIFDPEAPLTIKV 114 Query: 697 ILELEKEAD 723 ++ EA+ Sbjct: 115 AADVFPEAE 123
>Q8DLI3:TIG_SYNEL Trigger factor - Synechococcus elongatus (Thermosynechococcus| elongatus) Length = 473 Score = 55.1 bits (131), Expect = 4e-07 Identities = 32/121 (26%), Positives = 60/121 (49%) Frame = +1 Query: 355 RDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSILLSMLGK 534 R + ++ IE+ G +Q+V+++ + L R VPGFR+ K P ++L LG+ Sbjct: 6 RSNSQLLATIEVSGTHSQQVYNQVVNDLLRHTQ-VPGFRKGKA------PRQLVLQQLGR 58 Query: 535 SRVTKFILQEILSVTVGDFVKKENLKVNPEIATTQSEGDLESSFAPGSSFGFNVILELEK 714 R+ +++++ V V+K N+ + +L F PG +F F+V ++E Sbjct: 59 ERLRYLAMEKLIEDAVKTAVEKNNIPYLGNLELAGGITELLDQFHPGENFSFSVTFDVEP 118 Query: 715 E 717 E Sbjct: 119 E 119
>Q935Z3:TIG_SYNP7 Trigger factor - Synechococcus sp. (strain PCC 7942) (Anacystis| nidulans R2) Length = 474 Score = 54.7 bits (130), Expect = 5e-07 Identities = 34/133 (25%), Positives = 70/133 (52%), Gaps = 3/133 (2%) Frame = +1 Query: 331 SFKTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSS 510 S K + K ++ L+IE+ G+ +++V++ LT L+R+ PGFR K +P Sbjct: 2 SIKVTQEKLPASRVGLQIEVSGEQSRQVYERTLTRLSREVR-FPGFRPGK------VPRP 54 Query: 511 ILLSMLGKSRVTKFILQEILSVTVGDFVKKENLKVNPEIATTQSEGDLES---SFAPGSS 681 +L+ LG++ + +++++ ++ + +E++ P I Q D E+ +F PG S Sbjct: 55 VLIQRLGETALKANAIEDLVQQSLESAIAQESI---PAIGNYQLSSDFETLVAAFQPGES 111 Query: 682 FGFNVILELEKEA 720 F F ++++ A Sbjct: 112 FSFEASVDVQPTA 124
>Q5N1P5:TIG_SYNP6 Trigger factor - Synechococcus sp. (strain ATCC 27144 / PCC 6301 /| SAUG 1402/1) (Anacystis nidulans) Length = 474 Score = 54.7 bits (130), Expect = 5e-07 Identities = 34/133 (25%), Positives = 70/133 (52%), Gaps = 3/133 (2%) Frame = +1 Query: 331 SFKTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSS 510 S K + K ++ L+IE+ G+ +++V++ LT L+R+ PGFR K +P Sbjct: 2 SIKVTQEKLPASRVGLQIEVSGEQSRQVYERTLTRLSREVR-FPGFRPGK------VPRP 54 Query: 511 ILLSMLGKSRVTKFILQEILSVTVGDFVKKENLKVNPEIATTQSEGDLES---SFAPGSS 681 +L+ LG++ + +++++ ++ + +E++ P I Q D E+ +F PG S Sbjct: 55 VLIQRLGETALKANAIEDLVQQSLESAIAQESI---PAIGNYQLSSDFETLVAAFQPGKS 111 Query: 682 FGFNVILELEKEA 720 F F ++++ A Sbjct: 112 FSFEASVDVQPTA 124
>Q3ANI7:TIG_SYNSC Trigger factor - Synechococcus sp. (strain CC9605)| Length = 469 Score = 51.6 bits (122), Expect = 5e-06 Identities = 30/126 (23%), Positives = 64/126 (50%) Frame = +1 Query: 319 LSLDSFKTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSN 498 +S + K + R ++ + + +PG+ + +++A+TSL+R +PGFR+ K Sbjct: 1 MSAAALKVTTEARPSSRLAVTVTVPGERCKTSYEDAITSLSRSI-NLPGFRKGK------ 53 Query: 499 IPSSILLSMLGKSRVTKFILQEILSVTVGDFVKKENLKVNPEIATTQSEGDLESSFAPGS 678 +P ++L+ LG R+ L++++ D +++E+L+ + + L SF PG Sbjct: 54 VPRTVLVQQLGGVRIKATALEKLIDNAWRDAIQQESLEPISQPDLSSGFDGLLESFEPGK 113 Query: 679 SFGFNV 696 F + Sbjct: 114 ELTFTL 119
>Q5Z064:TIG_NOCFA Trigger factor - Nocardia farcinica| Length = 465 Score = 50.4 bits (119), Expect = 1e-05 Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 2/143 (1%) Frame = +1 Query: 331 SFKTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSS 510 S K++V + ++ + +E+P + + FD A +LA+ +PGFR K P+ Sbjct: 2 SVKSTVEQLSPTRVRINVEVPFEELKPDFDRAYKALAKQV-RIPGFRPGKA------PAK 54 Query: 511 ILLSMLGKSRVTKFILQEILSVTVGDFVKKENLKV--NPEIATTQSEGDLESSFAPGSSF 684 +L + LG+ + + ++ ++L + V +KV P+I T+ E G F Sbjct: 55 LLEARLGRGAILEQVVNDVLPARYSEAVTTSEVKVIGQPDIEITKIE--------DGQEF 106 Query: 685 GFNVILELEKEADTDDAIDVEVS 753 F+ +++ E D D+EV+ Sbjct: 107 AFSAEVDVRPEIALPDYADLEVT 129
>Q4JWV5:TIG_CORJK Trigger factor - Corynebacterium jeikeium (strain K411)| Length = 526 Score = 48.1 bits (113), Expect = 5e-05 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 4/143 (2%) Frame = +1 Query: 337 KTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSIL 516 K+SV K + L IE+P + + FD+A +LA+ +PGFR+ K +P+ IL Sbjct: 2 KSSVEKLSATRTKLTIEVPFEELKPEFDKAYATLAQQV-NMPGFRKGK------VPAKIL 54 Query: 517 LSMLGKSRVTKFILQEILSVTVGDFVKKENLKV--NPEIATTQSEGDLESSFAPGSSFGF 690 + LG+ V ++ E+L V++ ++K PEI + E G F Sbjct: 55 EARLGRGVVLDQVINEMLPSRYSQAVEENDVKALGQPEIEIAELE--------DGKHITF 106 Query: 691 NVILELEKEADTDD--AIDVEVS 753 +++ E + D AI VEV+ Sbjct: 107 TAEVDVRPEIEVPDFSAISVEVA 129
>Q7V9L7:TIG_PROMA Trigger factor - Prochlorococcus marinus| Length = 467 Score = 47.0 bits (110), Expect = 1e-04 Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 2/106 (1%) Frame = +1 Query: 319 LSLDSFKTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSN 498 +S K + +I + E+P + + F++ALT+L + A +PGFR+ K Sbjct: 1 MSNSQLKIKTKALPNSRIAIEFEVPAQQCKTSFEDALTTLCKSA-NLPGFRKGK------ 53 Query: 499 IPSSILLSMLGKSRVTKFILQEILSVTVGDFVKKENLK--VNPEIA 630 +P S++L +G R+ L+++L +K+E+++ PE+A Sbjct: 54 VPKSVILQQIGSKRIQASALEKLLEKIWKQALKEESIEPLCEPELA 99
>Q6NFU3:TIG_CORDI Trigger factor - Corynebacterium diphtheriae| Length = 448 Score = 43.5 bits (101), Expect = 0.001 Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 4/155 (2%) Frame = +1 Query: 337 KTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSIL 516 K+SV K + ++ L +E+P + + D+A +LA+ +PGFRR K P ++ Sbjct: 2 KSSVEKLSETRVKLNVEVPFEELKPEIDQAYKALAQQI-TIPGFRRGKA------PRQLI 54 Query: 517 LSMLGKSRVTKFILQEILSVTVGDFVKKENLKV--NPEIATTQSEGDLESSFAPGSSFGF 690 + +G+ V + ++ ++L V++ L V P I T+ E Sbjct: 55 DARIGRGAVLEQVINDMLPTRYQQVVEENELVVLGQPHIDITKLED-------------- 100 Query: 691 NVILELEKEADTDDAIDVE--VSDSMDAPDVKQSD 789 N ++E E D I V + +++ P +K +D Sbjct: 101 NEVVEFTAEVDVRPEITVPDFSAFAVEVPALKSND 135
>Q8FN35:TIG_COREF Trigger factor - Corynebacterium efficiens| Length = 454 Score = 43.1 bits (100), Expect = 0.002 Identities = 24/105 (22%), Positives = 55/105 (52%), Gaps = 2/105 (1%) Frame = +1 Query: 337 KTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSIL 516 K+SV + D ++ + +E+P + + D+A +LA+ +PGFR+ K P ++ Sbjct: 2 KSSVEQLSDTRVKITVEVPFEELKPELDQAYAALAQQV-QIPGFRKGKA------PRQLI 54 Query: 517 LSMLGKSRVTKFILQEILSVTVGDFVKKENLKV--NPEIATTQSE 645 + G+ V + ++ ++L G +++ ++K P++ T+ E Sbjct: 55 DARFGRGPVLEQVVNDMLPTRYGQAIEENDIKAIGQPDVEITKIE 99
>Q46ID5:TIG_PROMT Trigger factor - Prochlorococcus marinus (strain NATL2A)| Length = 472 Score = 42.7 bits (99), Expect = 0.002 Identities = 24/92 (26%), Positives = 49/92 (53%) Frame = +1 Query: 337 KTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSIL 516 KTS + + +I + +E+P + +DEAL+ L+R +PGFR+ K +P +++ Sbjct: 9 KTSA--KPNSRIAVEVEVPANRCKNSYDEALSKLSRSI-SIPGFRKGK------VPKTVV 59 Query: 517 LSMLGKSRVTKFILQEILSVTVGDFVKKENLK 612 + LG R+ L+ +L + + +E ++ Sbjct: 60 IQQLGVKRIQASALESLLQKVWTETLDQEGIE 91
>Q8NMZ9:TIG_CORGL Trigger factor - Corynebacterium glutamicum (Brevibacterium flavum)| Length = 449 Score = 39.7 bits (91), Expect = 0.018 Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 2/105 (1%) Frame = +1 Query: 337 KTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSIL 516 K+SV K D + + +E+P + D+A +LA+ +PGFR+ K P ++ Sbjct: 2 KSSVEKLSDTRSKITVEVPFSELKPEIDQAYAALAQQV-QIPGFRKGKA------PRQLI 54 Query: 517 LSMLGKSRVTKFILQEILSVTVGDFVKKENLKV--NPEIATTQSE 645 + G+ V + ++ ++L ++ E +K P + T+ E Sbjct: 55 DARFGRGAVLEQVVNDMLPNRYAQAIEAEGIKAIGQPNVEVTKIE 99
>Q0SGY9:TIG_RHOSR Trigger factor - Rhodococcus sp. (strain RHA1)| Length = 464 Score = 37.7 bits (86), Expect = 0.069 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%) Frame = +1 Query: 337 KTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSIL 516 K++V + ++ + +E+P + + FD+A +LA+ +PGFR K P+ +L Sbjct: 2 KSTVEQLSPTRVRINVEVPFEELKPDFDKAYKALAQQI-RLPGFRPGKA------PAKLL 54 Query: 517 LSMLGKSRVTKFILQEILSVTVGDFVKKENLKV--NPEIATTQSE 645 + +G+ V + ++ + L + V ++K PEI T+ E Sbjct: 55 EARVGRGAVLEQVVNDALPSRYSEAVTSASVKAIGQPEIEITKIE 99
>Q47MU1:TIG_THEFY Trigger factor - Thermobifida fusca (strain YX)| Length = 463 Score = 37.0 bits (84), Expect = 0.12 Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 2/143 (1%) Frame = +1 Query: 337 KTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSIL 516 KT+V + ++ L IE+P + FD SLA+ R KG + P+ ++ Sbjct: 2 KTAVEELSPTRVKLTIEVPFEELDHAFDVTYKSLAKQV-------RIKGFRPGKAPAKLI 54 Query: 517 LSMLGKSRVTKFILQEILSVTVGDFVKKENLKV--NPEIATTQSEGDLESSFAPGSSFGF 690 +G+ V + + + V KE + V PE+ T+ E E +F Sbjct: 55 DRYVGRGAVLTQAVNHAVPELYSEAVSKEEVPVLGPPEVEITRLEDGKELAFTA------ 108 Query: 691 NVILELEKEADTDDAIDVEVSDS 759 V + + E + I+V V D+ Sbjct: 109 EVDVRPKFEVTDYEGIEVTVDDA 131
>Q4KLP8:SGOL1_XENLA Shugoshin-like 1 - Xenopus laevis (African clawed frog)| Length = 663 Score = 34.7 bits (78), Expect = 0.58 Identities = 25/125 (20%), Positives = 51/125 (40%) Frame = +1 Query: 289 PVADAAEKTGLSLDSFKTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGF 468 P A+ ++ TGL+ ++ +TS +++ ++ GKA + + P Sbjct: 319 PHANGSKMTGLASEAKQTSNKNKEEPRVGRERVKKGKAERVAVSQMKKPWENSKPRARSK 378 Query: 469 RRSKGGKTSNIPSSILLSMLGKSRVTKFILQEILSVTVGDFVKKENLKVNPEIATTQSEG 648 R + ++ + S L F +E + VT K+E + + + SEG Sbjct: 379 SRDRSASKKSVAKEKMNSSLNSGDAFDFACEESIHVTPFRQNKQEESQNESSLEISSSEG 438 Query: 649 DLESS 663 +L+ S Sbjct: 439 ELDDS 443
>P71575:Y007_MYCTU Uncharacterized protein Rv0007/MT0007 - Mycobacterium tuberculosis| Length = 304 Score = 34.3 bits (77), Expect = 0.76 Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 12/96 (12%) Frame = -2 Query: 271 GRPTPAGTRASRRFSR*KQATLGQAWGTCR-------NRQSSCGCGPGRPPEAGSSR--- 122 GRPT A R +R G + +S GCG G P EA +S Sbjct: 69 GRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPD 128 Query: 121 --GIVDRAGASERSRLKPWMGEAGFSEVSAAGEEGG 20 G RA + +P G AG SAAG GG Sbjct: 129 LSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGG 164
>Q9CBY2:TIG_MYCLE Trigger factor - Mycobacterium leprae| Length = 469 Score = 34.3 bits (77), Expect = 0.76 Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 2/112 (1%) Frame = +1 Query: 337 KTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSIL 516 K+SV + + ++ + +E+P + F A LAR +PGFR K +P+ +L Sbjct: 2 KSSVEQLNPTRVRINVEVPFTELEPDFQRAYKELARHV-QLPGFRPGK------VPARLL 54 Query: 517 LSMLGKSRVTKFILQEILSVTVGDFVKKENLKV--NPEIATTQSEGDLESSF 666 + G+ + ++ E + G + + ++ PEI + E + +F Sbjct: 55 EARFGRETLLDQVVNEAMPSRYGQALAESEVQPIGQPEIEVIRKEYGQDLAF 106
>Q4K7Q8:GCSP1_PSEF5 Glycine dehydrogenase [decarboxylating] 1 - Pseudomonas fluorescens| (strain Pf-5 / ATCC BAA-477) Length = 951 Score = 33.5 bits (75), Expect = 1.3 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 1/101 (0%) Frame = +1 Query: 214 LVSTGRSAARHAFLP-VSAARSGRGAPVADAAEKTGLSLDSFKTSVVKRDDEKIHLRIEL 390 LV G + + +F +S +GR A + D A G++L D E++ L ++ Sbjct: 372 LVQLGLTVEQESFFDTLSLHTAGRTAALHDKARAQGINLRVI-------DAERLGLSLD- 423 Query: 391 PGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSI 513 + T + E L SL D P P F TS IP+++ Sbjct: 424 --ETTTQADVETLWSLLADGKPAPDFAALAAAVTSGIPAAL 462
>O83209:Y179_TREPA Uncharacterized protein TP_0179 - Treponema pallidum| Length = 627 Score = 33.1 bits (74), Expect = 1.7 Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 33/169 (19%) Frame = +1 Query: 262 SAARSGRGAPVADAAEKTGLSLDSFKTSVVKRDDEKIHLRIELPGKATQKV--------- 414 S++ AP DAA S D T + D+++ L + T++ Sbjct: 169 SSSDQAADAPAGDAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMP 228 Query: 415 ----------FDEALTSLARDAPPVP---------GFRRSKGGKTSNIPSS----ILLSM 525 FD+ L+SL+ DAP P S G P S + S+ Sbjct: 229 CPSGSCDTTEFDDLLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSL 288 Query: 526 LGKSRVTKFILQEILSVTVGDFVKKENLKVNPEIATTQSEGD-LESSFA 669 +G ++V Q + T GD LK+ EI++ +++ D L+ +F+ Sbjct: 289 MGDAQVA---AQGAQASTSGDASTDLLLKIAQEISSIRADLDQLKGTFS 334
>Q9FPQ6:GP1_CHLRE Vegetative cell wall protein gp1 precursor - Chlamydomonas| reinhardtii Length = 555 Score = 33.1 bits (74), Expect = 1.7 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 18 APPSSPAAETSEKPASPIHGFSRDLSEAPARSTMPRLLPASGGRPGPHP 164 +PP SPA T SP S S +P+ S P +P+ +P P P Sbjct: 333 SPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIPSPSPKPSPSP 381
>P18488:EMS_DROME Homeotic protein empty spiracles - Drosophila melanogaster (Fruit| fly) Length = 497 Score = 33.1 bits (74), Expect = 1.7 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Frame = +3 Query: 24 PSSPAAETSEKPASPIHGFSRDLSEAPARSTMPRLLPASGGRPGPHPH---EDWRFLQVP 194 P SP P SP L+ P + P + G P PHPH + + LQ P Sbjct: 50 PQSPPPGERNVPGSPPQTPPATLTLIPGSPPHHLMAPPAHGLPYPHPHAQQQQQQHLQAP 109 Query: 195 HACPRVA 215 H P ++ Sbjct: 110 HPHPHLS 116
>P97445:CAC1A_MOUSE Voltage-dependent P/Q-type calcium channel subunit alpha-1A - Mus| musculus (Mouse) Length = 2368 Score = 33.1 bits (74), Expect = 1.7 Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 3/91 (3%) Frame = +3 Query: 366 KDPFKNRVAWEGNTEGV**GSDEPGTRRAAGSRFQKVQGRENIKYTKQHSPVNAGQEPGH 545 +DP R AW G+ E G + P R + + + RE+ + AG P Sbjct: 856 RDPDARR-AWPGSPERAP-GREGPYGRESEPQQREHAPPREHAPWDADTERAKAGDAPRR 913 Query: 546 KVH---PSGNTQRHRRRLRQEGEPQGEP*NR 629 H G +RHR R R EP P R Sbjct: 914 HTHRPVAEGEPRRHRARRRPGDEPDDRPERR 944
>O08808:DIAP1_MOUSE Protein diaphanous homolog 1 - Mus musculus (Mouse)| Length = 1255 Score = 32.7 bits (73), Expect = 2.2 Identities = 22/61 (36%), Positives = 25/61 (40%) Frame = +2 Query: 179 VPASAPCLPKGCLFLPGEAPRGTRSCRCRPPDQVGAHRSPMPPRRPGCRWTASRHPLSNA 358 VP S P P C+ P P G +C PP G+ P PP PG PL A Sbjct: 599 VPPSPPLPPGTCIPPPPPLPGG--ACIPPPPQLPGSAAIPPPPPLPGVASIPPPPPLPGA 656 Query: 359 T 361 T Sbjct: 657 T 657
>P54282:CAC1A_RAT Voltage-dependent P/Q-type calcium channel subunit alpha-1A - Rattus| norvegicus (Rat) Length = 2212 Score = 32.3 bits (72), Expect = 2.9 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 3/91 (3%) Frame = +3 Query: 366 KDPFKNRVAWEGNTEGV**GSDEPGTRRAAGSRFQKVQGRENIKYTKQHSPVNAGQEPGH 545 +DP R AW + E G + P R + + + RE++ + AG P Sbjct: 856 RDPDARR-AWPSSPERAP-GREGPYGRESEPQQREHAPPREHVPWDADPERAKAGDAPRR 913 Query: 546 KVH---PSGNTQRHRRRLRQEGEPQGEP*NR 629 H G +RHR R R EP P R Sbjct: 914 HTHRPVAEGEPRRHRARRRPGDEPDDRPERR 944
>P47580:Y338_MYCGE Uncharacterized lipoprotein MG338 precursor - Mycoplasma genitalium| Length = 1271 Score = 32.0 bits (71), Expect = 3.8 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 7/62 (11%) Frame = +1 Query: 481 GGKTSN-------IPSSILLSMLGKSRVTKFILQEILSVTVGDFVKKENLKVNPEIATTQ 639 GG +SN I SS +++ KS +TK QE+ S G VK E LK+NP ++++ Sbjct: 365 GGTSSNLNPLDKFIKSSSATTVMMKSAMTKS--QEVTSDNNGFNVKSEFLKINPSLSSSG 422 Query: 640 SE 645 S+ Sbjct: 423 SD 424
>Q9BZF1:OSBL8_HUMAN Oxysterol-binding protein-related protein 8 - Homo sapiens (Human)| Length = 889 Score = 31.6 bits (70), Expect = 4.9 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 9/101 (8%) Frame = +1 Query: 340 TSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARD---------APPVPGFRRSKGGKT 492 ++VV DE ++ PGK +Q+ EA + +D +P GF R K + Sbjct: 26 STVVANSDES---QLLTPGKMSQRQGKEAYPTPTKDLHQPSLSPASPHSQGFERGKEDIS 82 Query: 493 SNIPSSILLSMLGKSRVTKFILQEILSVTVGDFVKKENLKV 615 N S L KS + E S T KKE+LKV Sbjct: 83 QNKDESSLSMSKSKSESKLYNGSEKDSSTSSKLTKKESLKV 123
>P16305:GBRA6_MOUSE Gamma-aminobutyric-acid receptor subunit alpha-6 precursor - Mus| musculus (Mouse) Length = 453 Score = 31.6 bits (70), Expect = 4.9 Identities = 23/63 (36%), Positives = 34/63 (53%) Frame = -1 Query: 527 SIDRRMLLGIFDVFPPLDLLKPGTGGASRARLVRASSNTFCVAFPGNSILKWIFSSSRLT 348 ++ R +L V PPL L P TGG S+ + + S F VAF G +++ WI S+ T Sbjct: 390 ALSRTPILKSTPVSPPL--LLPATGGTSK--IDQYSRILFPVAFAGFNLVYWIVYLSKDT 445 Query: 347 TDV 339 +V Sbjct: 446 MEV 448
>P17437:XP2_XENLA Skin secretory protein xP2 precursor - Xenopus laevis (African| clawed frog) Length = 439 Score = 31.2 bits (69), Expect = 6.5 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +3 Query: 18 APPSSPAAETSEKPASPIHGFSRDLSEAPARSTMPRLLPASGGRPGPHPHE 170 AP +PA + PA P G + + APA P PA G P P P E Sbjct: 186 APAPAPAEGEAPAPA-PAEGEAPAPAPAPAEGEAPAPAPAEGEAPAPAPAE 235 Score = 30.8 bits (68), Expect = 8.4 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Frame = +3 Query: 18 APPSSPAAETSEKPA---SPIHGFSRDLSEAPARSTMPRLLPASGGRPGPHPHE 170 AP +PA + PA +P + APA P PA GG P P P E Sbjct: 44 APAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAE 97 Score = 30.8 bits (68), Expect = 8.4 Identities = 19/51 (37%), Positives = 21/51 (41%) Frame = +3 Query: 18 APPSSPAAETSEKPASPIHGFSRDLSEAPARSTMPRLLPASGGRPGPHPHE 170 AP +PA E PA P + APA P PA G P P P E Sbjct: 206 APAPAPAPAEGEAPA-PAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAE 255
>Q9VUQ5:AGO2_DROME Protein argonaute-2 - Drosophila melanogaster (Fruit fly)| Length = 1214 Score = 31.2 bits (69), Expect = 6.5 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Frame = +3 Query: 423 GSDEPGTRRAAGSRFQKVQGRENIK-YTKQ-----HSPVNAGQEPGHKVHPSGNTQ--RH 578 G + ++ A G QK QG++ ++ +TKQ H GQ+ G++ P G Q Sbjct: 87 GGQQQKSQDAEGWTAQKKQGKQQVQGWTKQGQQGGHQQGRQGQDGGYQQRPPGQQQGGHQ 146 Query: 579 RRRLRQEGEPQGEP 620 + R QEG Q P Sbjct: 147 QGRQGQEGGYQQRP 160
>Q8PBY7:TIG_XANCP Trigger factor - Xanthomonas campestris pv. campestris| Length = 430 Score = 30.8 bits (68), Expect = 8.4 Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Frame = +1 Query: 472 RSKGGKTSNIPSSILLSMLGKSRVTKFILQEILSVTVGDFVKKENLKV--NPEIATTQSE 645 R KG + +P+ ++ G+ +V ++ +L T V++ +L++ NP I +S+ Sbjct: 40 RIKGFRPGKVPTKVIEQRFGQ-QVRAEAMEGLLRETFDSAVREHSLRLAGNPRIDQGESD 98 Query: 646 GDLESSFAPGSSFGFNVILELEKEADTDDAIDVEVSDSMD 765 D ++F FG + L T + D ++ ++ Sbjct: 99 FDFVATFEVVPDFGDIDVTNLSVVRHTAEVTDADIDQMIE 138
>Q4URL3:TIG_XANC8 Trigger factor - Xanthomonas campestris pv. campestris (strain| 8004) Length = 430 Score = 30.8 bits (68), Expect = 8.4 Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Frame = +1 Query: 472 RSKGGKTSNIPSSILLSMLGKSRVTKFILQEILSVTVGDFVKKENLKV--NPEIATTQSE 645 R KG + +P+ ++ G+ +V ++ +L T V++ +L++ NP I +S+ Sbjct: 40 RIKGFRPGKVPTKVIEQRFGQ-QVRAEAMEGLLRETFDSAVREHSLRLAGNPRIDQGESD 98 Query: 646 GDLESSFAPGSSFGFNVILELEKEADTDDAIDVEVSDSMD 765 D ++F FG + L T + D ++ ++ Sbjct: 99 FDFVATFEVVPDFGDIDVTNLSVVRHTAEVTDADIDQMIE 138
>Q9HRW6:PSMR2_HALSA Proteasome-activating nucleotidase 2 - Halobacterium salinarium| (Halobacterium halobium) Length = 407 Score = 30.8 bits (68), Expect = 8.4 Identities = 16/58 (27%), Positives = 28/58 (48%) Frame = +1 Query: 616 NPEIATTQSEGDLESSFAPGSSFGFNVILELEKEADTDDAIDVEVSDSMDAPDVKQSD 789 N + A T+ +L ++ PGS N L + ++ D + + V + D+PDV D Sbjct: 93 NNQEALTEVTDELRATLEPGSRVAVNNSLSVVRQLDDEADVRARVMEVDDSPDVGYED 150
>Q9NP08:HMX1_HUMAN Homeobox protein HMX1 - Homo sapiens (Human)| Length = 373 Score = 30.8 bits (68), Expect = 8.4 Identities = 21/58 (36%), Positives = 25/58 (43%) Frame = -2 Query: 271 GRPTPAGTRASRRFSR*KQATLGQAWGTCRNRQSSCGCGPGRPPEAGSSRGIVDRAGA 98 GR P G RR R + G+ R RQ G GPG G +R + RAGA Sbjct: 37 GRRQPGGRGGGRRRPRRRGRRAGRRRRLQRRRQLLAGTGPG-----GEARAVPARAGA 89
>P98174:FGD1_HUMAN FYVE, RhoGEF and PH domain-containing protein 1 - Homo sapiens| (Human) Length = 961 Score = 30.8 bits (68), Expect = 8.4 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Frame = +3 Query: 423 GSDEPG--TRRAAGSRFQKVQGRENIKYTKQHSPVNAGQEPGHKVHPSGNTQRHRRRLR 593 G+ EPG RR +GS + G + ++ S + G PGH+V P G + +H R LR Sbjct: 36 GASEPGLLARRGSGSA---LGGPLDPQFVGP-SDTSLGAAPGHRVLPCGPSPQHHRALR 90
>Q8N9M1:CS047_HUMAN Uncharacterized protein C19orf47 - Homo sapiens (Human)| Length = 422 Score = 30.8 bits (68), Expect = 8.4 Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 2/110 (1%) Frame = +2 Query: 176 AVPASAPCLPKGCLFLPGEAPRGTRSCRCRPPDQVGAHRSP--MPPRRPGCRWTASRHPL 349 A S PC P L GE RGT + + + H SP PPRRP + + Sbjct: 116 AATESVPCSPSP---LAGEIRRGTSAASRMITNSLN-HDSPPSTPPRRPDTSTSKISVTV 171 Query: 350 SNATTKRSI*ESSCLGRQHRRCLMRL*RAWHATRRRFQVSEGPREGKHQI 499 SN +S ++ L R+ L A A RRR EGK+ I Sbjct: 172 SNKMAAKSAKATAALARREEESL-----AVPAKRRRVTAE---MEGKYVI 213
>P08588:ADRB1_HUMAN Beta-1 adrenergic receptor - Homo sapiens (Human)| Length = 477 Score = 30.8 bits (68), Expect = 8.4 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Frame = -2 Query: 241 SRRFSR*KQATLGQAWGTCRNRQSSCGCGPGRPPEAG--SSRGIVDRAGASERSR-LKPW 71 +RR +R + AT G R R S C PG PP G S D GA+ +R L+PW Sbjct: 394 ARRAARRRHATHGD-----RPRASGCLARPGPPPSPGAASDDDDDDVVGATPPARLLEPW 448 Query: 70 MG 65 G Sbjct: 449 AG 450 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 158,485,757 Number of extensions: 3666276 Number of successful extensions: 14660 Number of sequences better than 10.0: 36 Number of HSP's gapped: 14542 Number of HSP's successfully gapped: 38 Length of query: 317 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 204 Effective length of database: 69,691,104 Effective search space: 14216985216 Effective search space used: 14216985216 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
