ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf23m05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK063800:Os07g0680300 76 1e-14
2AK066786:Os04g0648700 30 0.62
3AK121170:Os09g0422500 28 4.0
4AK072356:Os07g0208500 28 4.0
5AK069196:Os03g0808100 28 4.0
6AK058615:Os03g0808100 28 4.0

>AK063800:Os07g0680300 |
          Length = 61
 Score = 76.3 bits (186), Expect = 1e-14
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = +2

Query: 119 QPADVTALATWGVAAGSAAIYLVQPFDWIKKTFFEKPEPEA 241
           Q  D+ A ATWGV AG+AAIYLVQPFDWIKKTFFEKPEPEA
Sbjct: 21  QSTDIAAAATWGVFAGTAAIYLVQPFDWIKKTFFEKPEPEA 61



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>AK066786:Os04g0648700 |
          Length = 650

 Score = 30.4 bits (67), Expect = 0.62
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -2

Query: 267 QPCTPISTHASGSGFSKKVF---LIQSNGWTR*MAALPAATPQVARAV 133
           +P T +S HA+GS  SK       I+ + W + + A+P  +P  A A+
Sbjct: 531 KPLTWLSVHANGSNISKGCVDKDRIKKSAWLKSLVAIPGVSPGQAIAI 578



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>AK121170:Os09g0422500 |
          Length = 1055

 Score = 27.7 bits (60), Expect = 4.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 366 WMENQTREHEGLVYYWLGH 310
           W  N TR+H G++  +LGH
Sbjct: 481 WPGNNTRDHPGMIQVFLGH 499



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>AK072356:Os07g0208500 |
          Length = 1081

 Score = 27.7 bits (60), Expect = 4.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 366 WMENQTREHEGLVYYWLGH 310
           W  N TR+H G++  +LGH
Sbjct: 490 WPGNNTRDHPGMIQVFLGH 508



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>AK069196:Os03g0808100 |
          Length = 1073

 Score = 27.7 bits (60), Expect = 4.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 366 WMENQTREHEGLVYYWLGH 310
           W  N TR+H G++  +LGH
Sbjct: 483 WPGNNTRDHPGMIQVFLGH 501



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>AK058615:Os03g0808100 |
          Length = 285

 Score = 27.7 bits (60), Expect = 4.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 366 WMENQTREHEGLVYYWLGH 310
           W  N TR+H G++  +LGH
Sbjct: 213 WPGNNTRDHPGMIQVFLGH 231


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,349,032
Number of extensions: 254844
Number of successful extensions: 712
Number of sequences better than 10.0: 6
Number of HSP's gapped: 712
Number of HSP's successfully gapped: 6
Length of query: 161
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 68
Effective length of database: 11,676,042
Effective search space: 793970856
Effective search space used: 793970856
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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