ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf23m05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P48505:UCR11_SOLTU Ubiquinol-cytochrome c reductase complex 6.7 ... 49 1e-05
2Q6NSM8:QSK_DANRE Serine/threonine-protein kinase QSK homolog - D... 33 0.49
3O08545:EFNA3_MOUSE Ephrin-A3 precursor - Mus musculus (Mouse) 31 1.9
4Q823Y5:GLGB_CHLCV 1,4-alpha-glucan-branching enzyme - Chlamydoph... 31 2.4
5P52797:EFNA3_HUMAN Ephrin-A3 precursor - Homo sapiens (Human) 31 2.4
6O48946:CESA1_ARATH Cellulose synthase A catalytic subunit 1 [UDP... 30 5.4
7Q6NRE8:SUV91_XENLA Histone-lysine N-methyltransferase SUV39H1 - ... 29 7.1
8P98200:AT8A2_MOUSE Probable phospholipid-transporting ATPase IB ... 29 9.3

>P48505:UCR11_SOLTU Ubiquinol-cytochrome c reductase complex 6.7 kDa protein - Solanum|
           tuberosum (Potato)
          Length = 62
 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 20/40 (50%), Positives = 30/40 (75%)
 Frame = +2

Query: 119 QPADVTALATWGVAAGSAAIYLVQPFDWIKKTFFEKPEPE 238
           Q  D+ A A WGVAA + A++++QP+D+++KTF EK E E
Sbjct: 22  QSTDIQAAAGWGVAAVTGALWVIQPWDFLRKTFIEKQEEE 61



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>Q6NSM8:QSK_DANRE Serine/threonine-protein kinase QSK homolog - Danio rerio|
           (Zebrafish) (Brachydanio rerio)
          Length = 1187

 Score = 33.1 bits (74), Expect = 0.49
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = -2

Query: 444 CDEK*TYMIIPLPWRGLHATQQETYIWMENQTREHEGLVYYWLGHPNSESSWKCTHQ--- 274
           C++       P   R +  TQQ+  ++ + Q   H+ +    LGH  ++ S   T+Q   
Sbjct: 635 CEQLQKMYAAPQDERLMEHTQQQHVLYQQEQQILHQQIQALSLGHGENQPSSHLTYQLQR 694

Query: 273 -KLQPCTPISTHASGSGF 223
            ++QP +P  TH S   F
Sbjct: 695 LRIQPSSPPPTHPSNHLF 712



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>O08545:EFNA3_MOUSE Ephrin-A3 precursor - Mus musculus (Mouse)|
          Length = 230

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 342 HEGLVYYWLGHPNSESSWKCTHQKLQPCTPISTHA 238
           H G  YY++  P     WKC   K+  C   ++H+
Sbjct: 131 HAGQEYYYISTPTHNLHWKCLRMKVFVCCASTSHS 165



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>Q823Y5:GLGB_CHLCV 1,4-alpha-glucan-branching enzyme - Chlamydophila caviae|
          Length = 719

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -2

Query: 426 YMIIPLPWRGLHATQQETYIWMENQTREHEGLVYYWLGHPNSESSWKCTH 277
           Y  +P  W+G H  +QE+++W++ +  ++  + YY     +  S+  C H
Sbjct: 603 YCELPYFWKGDH--KQESFLWVDFKDTKNNVISYYRFSGEDRSSALLCIH 650



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>P52797:EFNA3_HUMAN Ephrin-A3 precursor - Homo sapiens (Human)|
          Length = 238

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 342 HEGLVYYWLGHPNSESSWKCTHQKLQPCTPISTHA 238
           H G  YY++  P     WKC   K+  C   ++H+
Sbjct: 139 HAGHEYYYISTPTHNLHWKCLRMKVFVCCASTSHS 173



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>O48946:CESA1_ARATH Cellulose synthase A catalytic subunit 1 [UDP-forming] -|
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 1081

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 387 TQQETYIWMENQTREHEGLVYYWLGH 310
           T Q+   W  N TR+H G++  +LGH
Sbjct: 482 TMQDGTPWPGNNTRDHPGMIQVFLGH 507



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>Q6NRE8:SUV91_XENLA Histone-lysine N-methyltransferase SUV39H1 - Xenopus laevis|
           (African clawed frog)
          Length = 421

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 372 YIWMENQTREHEGLVYYWLGHPNSESSWKCTH 277
           Y+W   + ++ E  +  W  +P+SES+W+  H
Sbjct: 50  YLWNYKKVQDQELYLVKWKYYPDSESTWEPRH 81



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>P98200:AT8A2_MOUSE Probable phospholipid-transporting ATPase IB - Mus musculus (Mouse)|
          Length = 1148

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 382 TGNLHLDGKSNKGTRGSCILLAGS 311
           TGNLHLDGKS+       ILL G+
Sbjct: 211 TGNLHLDGKSSVALGPDQILLRGT 234


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 72,828,677
Number of extensions: 1442544
Number of successful extensions: 3742
Number of sequences better than 10.0: 8
Number of HSP's gapped: 3741
Number of HSP's successfully gapped: 8
Length of query: 161
Length of database: 100,686,439
Length adjustment: 104
Effective length of query: 57
Effective length of database: 72,159,759
Effective search space: 4113106263
Effective search space used: 4113106263
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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