| Clone Name | FLbaf23h16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | O95359:TACC2_HUMAN Transforming acidic coiled-coil-containing pr... | 32 | 4.0 | 2 | P56546:CTBP2_MOUSE C-terminal-binding protein 2 - Mus musculus (... | 32 | 4.0 | 3 | Q08379:GOGA2_HUMAN Golgin subfamily A member 2 - Homo sapiens (H... | 31 | 6.8 |
|---|
>O95359:TACC2_HUMAN Transforming acidic coiled-coil-containing protein 2 - Homo sapiens| (Human) Length = 2948 Score = 31.6 bits (70), Expect = 4.0 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 12/54 (22%) Frame = -3 Query: 149 VPAGVQRARAAVGS------------GCPLEPGDISGAAGEGSGGMRARRRERQ 24 V AG+ R A+G+ PLEPG ++GAAGE G + E Q Sbjct: 1664 VTAGILEMRNALGNQSTPAPPTGEVADTPLEPGKVAGAAGEAEGDITLSTAETQ 1717
>P56546:CTBP2_MOUSE C-terminal-binding protein 2 - Mus musculus (Mouse)| Length = 445 Score = 31.6 bits (70), Expect = 4.0 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = -3 Query: 593 GPVAAGLVPAEQGALPGGVPAGGH-DAVAHAGQRRPEEDEGQTVGDEARH 447 G GL PA +G +PGG+P + VAH Q P ++ GD H Sbjct: 393 GVAPGGLPPAMEGIIPGGIPVTHNLPTVAHPSQ-APSPNQPTKHGDNREH 441
>Q08379:GOGA2_HUMAN Golgin subfamily A member 2 - Homo sapiens (Human)| Length = 990 Score = 30.8 bits (68), Expect = 6.8 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -3 Query: 584 AAGLVPAEQGALPGGVPAGGHDAVAHAGQRRPEEDEGQTVGDEAR 450 AA L P++ LPGGVP+ G + A + + D + DE + Sbjct: 63 AATLQPSDDTVLPGGVPSPGASLTSMAASQNHDADNVPNLMDETK 107 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 94,543,708 Number of extensions: 1714742 Number of successful extensions: 7757 Number of sequences better than 10.0: 3 Number of HSP's gapped: 7712 Number of HSP's successfully gapped: 3 Length of query: 274 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 162 Effective length of database: 69,965,399 Effective search space: 11334394638 Effective search space used: 11334394638 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)