| Clone Name | FLbaf19m07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830442.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA030M19, full insert sequence Length = 853 Score = 521 bits (263), Expect = e-144 Identities = 470/539 (87%) Strand = Plus / Plus Query: 49 gagattgcgtacgttagctacggcggtgagcagcacctcccactggtgatgtcgctggtg 108 ||||| |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 127 gagatcgcgtacgtcagctacggcggggagcaccacctcccgctggtgatgtcgctggtg 186 Query: 109 gacgcggagctcagcgaaccctactccatcttcacctaccgctacttcgtctacctctgg 168 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 gacgaggagctcagcgagccctactccatcttcacctaccgctacttcgtctacctctgg 246 Query: 169 ccacagctcaccttgctcgcgtttgatgccaaggatggtaagtgcgtggggacagtggtt 228 || ||||||||||| |||||||| ||| |||||||||| |||||||||||||| ||||| Sbjct: 247 ccccagctcaccttcctcgcgttcgatcccaaggatggcaagtgcgtggggacggtggtg 306 Query: 229 tgcaagatgggggagcacagaggcgccttcagggggtacatcgccatgcttgtcgtcctc 288 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 307 tgcaagatgggggagcacaggggggccttcagggggtacatcgccatgctcgtcgtgctc 366 Query: 289 aagccctaccgaggacgaggaatcgcaactgagctggttactagagccattcgggtaatg 348 ||||||||||| || | |||||||| || || ||||||| ||| | |||||||||||| Sbjct: 367 aagccctaccgcggcaggggaatcgccaccgaattggttacgagatctattcgggtaatg 426 Query: 349 atggattctggctgtgaggaggtgacgcttgaagcagaagttacaaacaagggtgccctc 408 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 427 atggaatctggctgtgaggaggtgacacttgaagcagaagttacgaacaagggcgccctc 486 Query: 409 gctctgtatggccgcctaggttttatccgggcaaagaggctctacagatattatttaaat 468 || | ||||| || | ||||| ||||| ||||||||||| |||||||| ||| | ||| Sbjct: 487 gccttatatggtcgtttgggtttcatccgagcaaagaggctgtacagatactatctgaat 546 Query: 469 ggcgtggatgcttttcgcctcaaattattgtttccacgccccgatcttggtctagatcca 528 ||||| || || |||||||| || | | ||||| ||||| |||| |||| | ||||| Sbjct: 547 ggcgtcgacgcatttcgcctgaagctgctatttcctcgccctgatcctggtatgcatcca 606 Query: 529 atgatgatgctaggtgacgagagggatgatcaacaaatggattcaccttacttgtgata 587 |||||||||||||| | ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 607 atgatgatgctaggcaatgagagagatgaccagcacatggattctccttacttgtgata 665
>ref|NM_001074527.1| Oryza sativa (japonica cultivar-group) Os11g0525800 (Os11g0525800) mRNA, complete cds Length = 859 Score = 521 bits (263), Expect = e-144 Identities = 470/539 (87%) Strand = Plus / Plus Query: 49 gagattgcgtacgttagctacggcggtgagcagcacctcccactggtgatgtcgctggtg 108 ||||| |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 129 gagatcgcgtacgtcagctacggcggggagcaccacctcccgctggtgatgtcgctggtg 188 Query: 109 gacgcggagctcagcgaaccctactccatcttcacctaccgctacttcgtctacctctgg 168 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 gacgaggagctcagcgagccctactccatcttcacctaccgctacttcgtctacctctgg 248 Query: 169 ccacagctcaccttgctcgcgtttgatgccaaggatggtaagtgcgtggggacagtggtt 228 || ||||||||||| |||||||| ||| |||||||||| |||||||||||||| ||||| Sbjct: 249 ccccagctcaccttcctcgcgttcgatcccaaggatggcaagtgcgtggggacggtggtg 308 Query: 229 tgcaagatgggggagcacagaggcgccttcagggggtacatcgccatgcttgtcgtcctc 288 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 309 tgcaagatgggggagcacaggggggccttcagggggtacatcgccatgctcgtcgtgctc 368 Query: 289 aagccctaccgaggacgaggaatcgcaactgagctggttactagagccattcgggtaatg 348 ||||||||||| || | |||||||| || || ||||||| ||| | |||||||||||| Sbjct: 369 aagccctaccgcggcaggggaatcgccaccgaattggttacgagatctattcgggtaatg 428 Query: 349 atggattctggctgtgaggaggtgacgcttgaagcagaagttacaaacaagggtgccctc 408 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 429 atggaatctggctgtgaggaggtgacacttgaagcagaagttacgaacaagggcgccctc 488 Query: 409 gctctgtatggccgcctaggttttatccgggcaaagaggctctacagatattatttaaat 468 || | ||||| || | ||||| ||||| ||||||||||| |||||||| ||| | ||| Sbjct: 489 gccttatatggtcgtttgggtttcatccgagcaaagaggctgtacagatactatctgaat 548 Query: 469 ggcgtggatgcttttcgcctcaaattattgtttccacgccccgatcttggtctagatcca 528 ||||| || || |||||||| || | | ||||| ||||| |||| |||| | ||||| Sbjct: 549 ggcgtcgacgcatttcgcctgaagctgctatttcctcgccctgatcctggtatgcatcca 608 Query: 529 atgatgatgctaggtgacgagagggatgatcaacaaatggattcaccttacttgtgata 587 |||||||||||||| | ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 609 atgatgatgctaggcaatgagagagatgaccagcacatggattctccttacttgtgata 667
>dbj|AK059719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-G09, full insert sequence Length = 859 Score = 517 bits (261), Expect = e-143 Identities = 465/533 (87%) Strand = Plus / Plus Query: 55 gcgtacgttagctacggcggtgagcagcacctcccactggtgatgtcgctggtggacgcg 114 |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||||| | Sbjct: 135 gcgtacgtcagctacggcggggagcaccacctcccgctggtgatgtcgctggtggacgag 194 Query: 115 gagctcagcgaaccctactccatcttcacctaccgctacttcgtctacctctggccacag 174 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 195 gagctcagcgagccctactccatcttcacctaccgctacttcgtctacctctggccccag 254 Query: 175 ctcaccttgctcgcgtttgatgccaaggatggtaagtgcgtggggacagtggtttgcaag 234 |||||||| |||||||| ||| |||||||||| |||||||||||||| ||||| |||||| Sbjct: 255 ctcaccttcctcgcgttcgatcccaaggatggcaagtgcgtggggacggtggtgtgcaag 314 Query: 235 atgggggagcacagaggcgccttcagggggtacatcgccatgcttgtcgtcctcaagccc 294 |||||||||||||| || |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 315 atgggggagcacaggggggccttcagggggtacatcgccatgctcgtcgtgctcaagccc 374 Query: 295 taccgaggacgaggaatcgcaactgagctggttactagagccattcgggtaatgatggat 354 ||||| || | |||||||| || || ||||||| ||| | ||||||||||||||||| Sbjct: 375 taccgcggcaggggaatcgccaccgaattggttacgagatctattcgggtaatgatggaa 434 Query: 355 tctggctgtgaggaggtgacgcttgaagcagaagttacaaacaagggtgccctcgctctg 414 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| | Sbjct: 435 tctggctgtgaggaggtgacacttgaagcagaagttacgaacaagggcgccctcgcctta 494 Query: 415 tatggccgcctaggttttatccgggcaaagaggctctacagatattatttaaatggcgtg 474 ||||| || | ||||| ||||| ||||||||||| |||||||| ||| | |||||||| Sbjct: 495 tatggtcgtttgggtttcatccgagcaaagaggctgtacagatactatctgaatggcgtc 554 Query: 475 gatgcttttcgcctcaaattattgtttccacgccccgatcttggtctagatccaatgatg 534 || || |||||||| || | | ||||| ||||| |||| |||| | ||||||||||| Sbjct: 555 gacgcatttcgcctgaagctgctatttcctcgccctgatcctggtatgcatccaatgatg 614 Query: 535 atgctaggtgacgagagggatgatcaacaaatggattcaccttacttgtgata 587 |||||||| | ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 615 atgctaggcaatgagagagatgaccagcacatggattctccttacttgtgata 667
>gb|DQ245919.1| Zea mays clone 22650 mRNA sequence Length = 767 Score = 468 bits (236), Expect = e-128 Identities = 398/452 (88%) Strand = Plus / Plus Query: 58 tacgttagctacggcggtgagcagcacctcccactggtgatgtcgctggtggacgcggag 117 ||||| ||||| ||||| |||||||| || || |||||||||||||||||||||| |||| Sbjct: 108 tacgtgagctatggcggggagcagcatctgccgctggtgatgtcgctggtggacgaggag 167 Query: 118 ctcagcgaaccctactccatcttcacctaccgctacttcgtctacctctggccacagctc 177 |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 168 ctcagcgagccctattccatcttcacctaccgctacttcgtctacctctggccgcagctc 227 Query: 178 accttgctcgcgtttgatgccaaggatggtaagtgcgtggggacagtggtttgcaagatg 237 ||||| || ||||| ||||||| |||||| ||||||||||||||||| || ||||||||| Sbjct: 228 accttcctggcgttcgatgccagggatggcaagtgcgtggggacagtcgtgtgcaagatg 287 Query: 238 ggggagcacagaggcgccttcagggggtacatcgccatgcttgtcgtcctcaagccctac 297 |||||||| || || || |||||||| |||||||||||||| |||||||||||||||||| Sbjct: 288 ggggagcataggggtgcattcaggggctacatcgccatgctcgtcgtcctcaagccctac 347 Query: 298 cgaggacgaggaatcgcaactgagctggttactagagccattcgggtaatgatggattct 357 ||||| | ||||| ||||||||||| ||||||||| | ||||||| ||||||||| ||| Sbjct: 348 cgagggaggggaatagcaactgagctagttactagatcaattcgggcaatgatggaatct 407 Query: 358 ggctgtgaggaggtgacgcttgaagcagaagttacaaacaagggtgccctcgctctgtat 417 ||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 408 ggctgtgaggaggtgacacttgaagcagaagttactaataagggtgcccttgctctgtat 467 Query: 418 ggccgcctaggttttatccgggcaaagaggctctacagatattatttaaatggcgtggat 477 || ||||| || |||||||| |||||||| | |||||||| ||| ||||||| || || Sbjct: 468 ggtcgccttgggtttatccgagcaaagagattgtacagatactatctaaatggtgtagac 527 Query: 478 gcttttcgcctcaaattattgtttccacgccc 509 || ||||| || ||| || ||||||| ||||| Sbjct: 528 gcatttcggctgaaactactgtttccgcgccc 559
>gb|AY110756.1| Zea mays CL56166_1 mRNA sequence Length = 810 Score = 327 bits (165), Expect = 4e-86 Identities = 274/312 (87%) Strand = Plus / Minus Query: 58 tacgttagctacggcggtgagcagcacctcccactggtgatgtcgctggtggacgcggag 117 ||||| ||||| ||||| |||||||| || || |||||||||||||||||||||| |||| Sbjct: 762 tacgtgagctatggcggggagcagcatctgccgctggtgatgtcgctggtggacgaggag 703 Query: 118 ctcagcgaaccctactccatcttcacctaccgctacttcgtctacctctggccacagctc 177 |||||||| ||||| ||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 702 ctcagcgagccctattccatcttcacctaccgctacttcggctacctctggccgcagctc 643 Query: 178 accttgctcgcgtttgatgccaaggatggtaagtgcgtggggacagtggtttgcaagatg 237 ||||| || ||||| ||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 642 accttcctggcgttcgatgccagggatggcaagtgcgtggggacagtcgtgtgcaagatn 583 Query: 238 ggggagcacagaggcgccttcagggggtacatcgccatgcttgtcgtcctcaagccctac 297 |||| || || || |||||||| |||||||||||||| |||||||||||||||||| Sbjct: 582 nnnnagcataggggtgcattcaggggctacatcgccatgctcgtcgtcctcaagccctac 523 Query: 298 cgaggacgaggaatcgcaactgagctggttactagagccattcgggtaatgatggattct 357 ||||| | ||||| ||||||||||| ||||||||| | ||||||| ||||||||| ||| Sbjct: 522 cgagggaggggaatagcaactgagctagttactagatcaattcgggcaatgatggaatct 463 Query: 358 ggctgtgaggag 369 |||||||||||| Sbjct: 462 ggctgtgaggag 451 Score = 107 bits (54), Expect = 7e-20 Identities = 120/142 (84%) Strand = Plus / Minus Query: 368 aggtgacgcttgaagcagaagttacaaacaagggtgccctcgctctgtatggccgcctag 427 ||||||| ||||||||||||||||| || ||||||||||| ||||||||||| ||||| | Sbjct: 434 aggtgacccttgaagcagaagttactaataagggtgcccttgctctgtatggtcgccttg 375 Query: 428 gttttatccgggcaaagaggctctacagatattatttaaatggcgtggatgcttttcgcc 487 | |||||||| |||||||| | |||||||| ||| ||||||| || || || ||||| | Sbjct: 374 ggtttatccgagcaaagagattgtacagatactatctaaatggtgtagacgcatttcggc 315 Query: 488 tcaaattattgtttccacgccc 509 | ||| || ||||||| ||||| Sbjct: 314 tgaaactactgtttccgcgccc 293
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 204 bits (103), Expect = 4e-49 Identities = 130/139 (93%) Strand = Plus / Minus Query: 49 gagattgcgtacgttagctacggcggtgagcagcacctcccactggtgatgtcgctggtg 108 ||||| |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 148615 gagatcgcgtacgtcagctacggcggggagcaccacctcccgctggtgatgtcgctggtg 148556 Query: 109 gacgcggagctcagcgaaccctactccatcttcacctaccgctacttcgtctacctctgg 168 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 148555 gacgaggagctcagcgagccctactccatcttcacctaccgctacttcgtctacctctgg 148496 Query: 169 ccacagctcaccttgctcg 187 || ||||||||||| |||| Sbjct: 148495 ccccagctcaccttcctcg 148477 Score = 153 bits (77), Expect = 1e-33 Identities = 104/113 (92%) Strand = Plus / Minus Query: 187 gcgtttgatgccaaggatggtaagtgcgtggggacagtggtttgcaagatgggggagcac 246 ||||| ||| |||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 148374 gcgttcgatcccaaggatggcaagtgcgtggggacggtggtgtgcaagatgggggagcac 148315 Query: 247 agaggcgccttcagggggtacatcgccatgcttgtcgtcctcaagccctaccg 299 || || |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 148314 aggggggccttcagggggtacatcgccatgctcgtcgtgctcaagccctaccg 148262 Score = 127 bits (64), Expect = 8e-26 Identities = 181/220 (82%) Strand = Plus / Minus Query: 368 aggtgacgcttgaagcagaagttacaaacaagggtgccctcgctctgtatggccgcctag 427 ||||||| ||||||||||||||||| |||||||| |||||||| | ||||| || | | Sbjct: 146471 aggtgacacttgaagcagaagttacgaacaagggcgccctcgccttatatggtcgtttgg 146412 Query: 428 gttttatccgggcaaagaggctctacagatattatttaaatggcgtggatgcttttcgcc 487 |||| ||||| ||||||||||| |||||||| ||| | |||||||| || || ||||||| Sbjct: 146411 gtttcatccgagcaaagaggctgtacagatactatctgaatggcgtcgacgcatttcgcc 146352 Query: 488 tcaaattattgtttccacgccccgatcttggtctagatccaatgatgatgctaggtgacg 547 | || | | ||||| ||||| |||| |||| | ||||||||||||||||||| | | Sbjct: 146351 tgaagctgctatttcctcgccctgatcctggtatgcatccaatgatgatgctaggcaatg 146292 Query: 548 agagggatgatcaacaaatggattcaccttacttgtgata 587 |||| ||||| || || |||||||| |||||||||||||| Sbjct: 146291 agagagatgaccagcacatggattctccttacttgtgata 146252 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 323 tggttactagagccattcgggtaatgatggattctggctgtgaggaggt 371 ||||||| ||| | ||||||||||||||||| ||||||||||||||||| Sbjct: 146737 tggttacgagatctattcgggtaatgatggaatctggctgtgaggaggt 146689
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 204 bits (103), Expect = 4e-49 Identities = 130/139 (93%) Strand = Plus / Minus Query: 49 gagattgcgtacgttagctacggcggtgagcagcacctcccactggtgatgtcgctggtg 108 ||||| |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 18413250 gagatcgcgtacgtcagctacggcggggagcaccacctcccgctggtgatgtcgctggtg 18413191 Query: 109 gacgcggagctcagcgaaccctactccatcttcacctaccgctacttcgtctacctctgg 168 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 18413190 gacgaggagctcagcgagccctactccatcttcacctaccgctacttcgtctacctctgg 18413131 Query: 169 ccacagctcaccttgctcg 187 || ||||||||||| |||| Sbjct: 18413130 ccccagctcaccttcctcg 18413112 Score = 153 bits (77), Expect = 1e-33 Identities = 104/113 (92%) Strand = Plus / Minus Query: 187 gcgtttgatgccaaggatggtaagtgcgtggggacagtggtttgcaagatgggggagcac 246 ||||| ||| |||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 18413009 gcgttcgatcccaaggatggcaagtgcgtggggacggtggtgtgcaagatgggggagcac 18412950 Query: 247 agaggcgccttcagggggtacatcgccatgcttgtcgtcctcaagccctaccg 299 || || |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 18412949 aggggggccttcagggggtacatcgccatgctcgtcgtgctcaagccctaccg 18412897 Score = 127 bits (64), Expect = 8e-26 Identities = 181/220 (82%) Strand = Plus / Minus Query: 368 aggtgacgcttgaagcagaagttacaaacaagggtgccctcgctctgtatggccgcctag 427 ||||||| ||||||||||||||||| |||||||| |||||||| | ||||| || | | Sbjct: 18411106 aggtgacacttgaagcagaagttacgaacaagggcgccctcgccttatatggtcgtttgg 18411047 Query: 428 gttttatccgggcaaagaggctctacagatattatttaaatggcgtggatgcttttcgcc 487 |||| ||||| ||||||||||| |||||||| ||| | |||||||| || || ||||||| Sbjct: 18411046 gtttcatccgagcaaagaggctgtacagatactatctgaatggcgtcgacgcatttcgcc 18410987 Query: 488 tcaaattattgtttccacgccccgatcttggtctagatccaatgatgatgctaggtgacg 547 | || | | ||||| ||||| |||| |||| | ||||||||||||||||||| | | Sbjct: 18410986 tgaagctgctatttcctcgccctgatcctggtatgcatccaatgatgatgctaggcaatg 18410927 Query: 548 agagggatgatcaacaaatggattcaccttacttgtgata 587 |||| ||||| || || |||||||| |||||||||||||| Sbjct: 18410926 agagagatgaccagcacatggattctccttacttgtgata 18410887 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 323 tggttactagagccattcgggtaatgatggattctggctgtgaggaggt 371 ||||||| ||| | ||||||||||||||||| ||||||||||||||||| Sbjct: 18411372 tggttacgagatctattcgggtaatgatggaatctggctgtgaggaggt 18411324
>dbj|AK120142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028E05, full insert sequence Length = 2631 Score = 204 bits (103), Expect = 4e-49 Identities = 130/139 (93%) Strand = Plus / Plus Query: 49 gagattgcgtacgttagctacggcggtgagcagcacctcccactggtgatgtcgctggtg 108 ||||| |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 130 gagatcgcgtacgtcagctacggcggggagcaccacctcccgctggtgatgtcgctggtg 189 Query: 109 gacgcggagctcagcgaaccctactccatcttcacctaccgctacttcgtctacctctgg 168 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 gacgaggagctcagcgagccctactccatcttcacctaccgctacttcgtctacctctgg 249 Query: 169 ccacagctcaccttgctcg 187 || ||||||||||| |||| Sbjct: 250 ccccagctcaccttcctcg 268 Score = 153 bits (77), Expect = 1e-33 Identities = 104/113 (92%) Strand = Plus / Plus Query: 187 gcgtttgatgccaaggatggtaagtgcgtggggacagtggtttgcaagatgggggagcac 246 ||||| ||| |||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 371 gcgttcgatcccaaggatggcaagtgcgtggggacggtggtgtgcaagatgggggagcac 430 Query: 247 agaggcgccttcagggggtacatcgccatgcttgtcgtcctcaagccctaccg 299 || || |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 431 aggggggccttcagggggtacatcgccatgctcgtcgtgctcaagccctaccg 483 Score = 127 bits (64), Expect = 8e-26 Identities = 181/220 (82%) Strand = Plus / Plus Query: 368 aggtgacgcttgaagcagaagttacaaacaagggtgccctcgctctgtatggccgcctag 427 ||||||| ||||||||||||||||| |||||||| |||||||| | ||||| || | | Sbjct: 2274 aggtgacacttgaagcagaagttacgaacaagggcgccctcgccttatatggtcgtttgg 2333 Query: 428 gttttatccgggcaaagaggctctacagatattatttaaatggcgtggatgcttttcgcc 487 |||| ||||| ||||||||||| |||||||| ||| | |||||||| || || ||||||| Sbjct: 2334 gtttcatccgagcaaagaggctgtacagatactatctgaatggcgtcgacgcatttcgcc 2393 Query: 488 tcaaattattgtttccacgccccgatcttggtctagatccaatgatgatgctaggtgacg 547 | || | | ||||| ||||| |||| |||| | ||||||||||||||||||| | | Sbjct: 2394 tgaagctgctatttcctcgccctgatcctggtatgcatccaatgatgatgctaggcaatg 2453 Query: 548 agagggatgatcaacaaatggattcaccttacttgtgata 587 |||| ||||| || || |||||||| |||||||||||||| Sbjct: 2454 agagagatgaccagcacatggattctccttacttgtgata 2493 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 323 tggttactagagccattcgggtaatgatggattctggctgtgaggaggt 371 ||||||| ||| | ||||||||||||||||| ||||||||||||||||| Sbjct: 2008 tggttacgagatctattcgggtaatgatggaatctggctgtgaggaggt 2056
>gb|DQ200361.1| Solanum tuberosum clone 054D08 unknown mRNA Length = 1172 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 115 gagctcagcgaaccctactccatcttcacctaccgctacttcgtctacctctggccaca 173 ||||| ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 224 gagcttagcgagccctactccatcttcacttaccgctactttgtctatctttggccaca 282 Score = 52.0 bits (26), Expect = 0.004 Identities = 62/74 (83%) Strand = Plus / Plus Query: 346 atgatggattctggctgtgaggaggtgacgcttgaagcagaagttacaaacaagggtgcc 405 |||||||| ||||| ||||| |||||||| | |||||||||||||| || || || || Sbjct: 449 atgatggaatctggttgtgaagaggtgactttggaagcagaagttacgaataaaggagca 508 Query: 406 ctcgctctgtatgg 419 |||||| ||||||| Sbjct: 509 ctcgctttgtatgg 522
>dbj|AK229007.1| Arabidopsis thaliana mRNA for cytoplasmic N-terminal acetyl transferase, complete cds, clone: RAFL16-30-L18 Length = 824 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 124 gaaccctactccatcttcacctaccgctacttcgtctacctctggccacagct 176 ||||| ||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 262 gaaccttactccatctttacttaccggtacttcgtctacctctggccgcagct 314
>ref|NM_129369.3| Arabidopsis thaliana ATMAK3; N-acetyltransferase (ATMAK3) mRNA, complete cds Length = 891 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 124 gaaccctactccatcttcacctaccgctacttcgtctacctctggccacagct 176 ||||| ||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 309 gaaccttactccatctttacttaccggtacttcgtctacctctggccgcagct 361
>ref|NM_201900.1| Arabidopsis thaliana ATMAK3; N-acetyltransferase (ATMAK3) mRNA, complete cds Length = 844 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 124 gaaccctactccatcttcacctaccgctacttcgtctacctctggccacagct 176 ||||| ||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 262 gaaccttactccatctttacttaccggtacttcgtctacctctggccgcagct 314
>gb|BT012615.1| Arabidopsis thaliana At2g38130 gene, complete cds Length = 573 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 124 gaaccctactccatcttcacctaccgctacttcgtctacctctggccacagct 176 ||||| ||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 118 gaaccttactccatctttacttaccggtacttcgtctacctctggccgcagct 170
>gb|BT010841.1| Arabidopsis thaliana At2g38130 mRNA, complete cds Length = 806 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 124 gaaccctactccatcttcacctaccgctacttcgtctacctctggccacagct 176 ||||| ||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 241 gaaccttactccatctttacttaccggtacttcgtctacctctggccgcagct 293
>gb|AC003028.3| Arabidopsis thaliana chromosome 2 clone F16M14 map ve018, complete sequence Length = 115359 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 124 gaaccctactccatcttcacctaccgctacttcgtctacctctggccacagct 176 ||||| ||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 47755 gaaccttactccatctttacttaccggtacttcgtctacctctggccgcagct 47703
>emb|BX818814.1|CNS0A9ZG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZA01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 857 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 124 gaaccctactccatcttcacctaccgctacttcgtctacctctggccacagct 176 ||||| ||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 309 gaaccttactccatctttacttaccggtacttcgtctacctctggccgcagct 361
>emb|BX821320.1|CNS0A96A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 830 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 124 gaaccctactccatcttcacctaccgctacttcgtctacctctggccacagct 176 ||||| ||||||||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 274 gaaccttactccatctttacttaccggtacttcgtctacctctggccgcagct 326
>gb|AC008530.7|AC008530 Homo sapiens chromosome 19 clone CTC-478M6, complete sequence Length = 89095 Score = 48.1 bits (24), Expect = 0.057 Identities = 24/24 (100%) Strand = Plus / Minus Query: 777 caaaaatatctgaattatttttca 800 |||||||||||||||||||||||| Sbjct: 45295 caaaaatatctgaattatttttca 45272
>emb|Z82172.2|HSB13C9 Human DNA sequence from clone SC22CB-13C9 on chromosome 22, complete sequence Length = 46283 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Minus Query: 163 ctctggccacagctcaccttgct 185 ||||||||||||||||||||||| Sbjct: 3492 ctctggccacagctcaccttgct 3470
>emb|AL159154.16| Human DNA sequence from clone RP11-428G23 on chromosome 13 Contains part of a novel gene (KIAA0916), complete sequence Length = 124964 Score = 44.1 bits (22), Expect = 0.88 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 gctctacagatattatttaaat 468 |||||||||||||||||||||| Sbjct: 12407 gctctacagatattatttaaat 12428
>emb|X96400.1|PTALPHA51 P.tetraurelia alpha-51D gene Length = 13320 Score = 44.1 bits (22), Expect = 0.88 Identities = 22/22 (100%) Strand = Plus / Minus Query: 776 ccaaaaatatctgaattatttt 797 |||||||||||||||||||||| Sbjct: 2563 ccaaaaatatctgaattatttt 2542
>ref|NM_001061997.1| Oryza sativa (japonica cultivar-group) Os05g0395300 (Os05g0395300) mRNA, complete cds Length = 1894 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 851 tgtcatggtctcatggacctt 871 ||||||||||||||||||||| Sbjct: 1669 tgtcatggtctcatggacctt 1689
>ref|NM_001059130.1| Oryza sativa (japonica cultivar-group) Os04g0380000 (Os04g0380000) mRNA, complete cds Length = 2166 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 gctacttcgtctacctctggccaca 173 ||||||||| ||||||||||||||| Sbjct: 1582 gctacttcgactacctctggccaca 1606
>gb|AC187752.3| Pan troglodytes BAC clone CH251-656I16 from chromosome 7, complete sequence Length = 218323 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 777 caaaaatatctgaattatttt 797 ||||||||||||||||||||| Sbjct: 69273 caaaaatatctgaattatttt 69253
>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0014C03, complete sequence Length = 143739 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 851 tgtcatggtctcatggacctt 871 ||||||||||||||||||||| Sbjct: 108559 tgtcatggtctcatggacctt 108579
>gb|AC158220.4| Mus musculus chromosome 7, clone RP23-278M8, complete sequence Length = 189304 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 783 tatctgaattatttttcaggt 803 ||||||||||||||||||||| Sbjct: 121972 tatctgaattatttttcaggt 121952
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 851 tgtcatggtctcatggacctt 871 ||||||||||||||||||||| Sbjct: 17814 tgtcatggtctcatggacctt 17834
>gb|AC161245.2| Mus musculus BAC clone RP24-394N21 from chromosome 9, complete sequence Length = 177389 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 580 ttgtgataataccctgatcaaaagc 604 ||||||||||||| ||||||||||| Sbjct: 112668 ttgtgataataccatgatcaaaagc 112692
>gb|AC101875.7| Mus musculus chromosome 12, clone RP23-367G12, complete sequence Length = 184813 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 849 catgtcatggtctcatggacc 869 ||||||||||||||||||||| Sbjct: 48396 catgtcatggtctcatggacc 48376
>gb|AC020743.7| Homo sapiens BAC clone RP11-813K3 from 7, complete sequence Length = 182528 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 777 caaaaatatctgaattatttt 797 ||||||||||||||||||||| Sbjct: 26439 caaaaatatctgaattatttt 26419
>gb|AC021558.10| Homo sapiens chromosome 8, clone RP11-746L20, complete sequence Length = 171582 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 784 atctgaattatttttcaggtg 804 ||||||||||||||||||||| Sbjct: 126421 atctgaattatttttcaggtg 126441
>gb|AC096567.3| Homo sapiens BAC clone RP11-293A4 from 4, complete sequence Length = 126750 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 791 ttatttttcaggtgtaaacat 811 ||||||||||||||||||||| Sbjct: 123988 ttatttttcaggtgtaaacat 124008
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 851 tgtcatggtctcatggacctt 871 ||||||||||||||||||||| Sbjct: 19095916 tgtcatggtctcatggacctt 19095936
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 gctacttcgtctacctctggccaca 173 ||||||||| ||||||||||||||| Sbjct: 18600538 gctacttcgactacctctggccaca 18600514
>emb|AL157830.10| Human DNA sequence from clone RP11-332M12 on chromosome 9p24.1-24.3, complete sequence Length = 168621 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 778 aaaaatatctgaattattttt 798 ||||||||||||||||||||| Sbjct: 125027 aaaaatatctgaattattttt 125047
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 gctacttcgtctacctctggccaca 173 ||||||||| ||||||||||||||| Sbjct: 68404 gctacttcgactacctctggccaca 68380
>gb|AC009476.3| Homo sapiens BAC clone RP11-207O14 from 2, complete sequence Length = 184406 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 agcagcacctcccactggtga 97 ||||||||||||||||||||| Sbjct: 58475 agcagcacctcccactggtga 58455
>dbj|AK103261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124D08, full insert sequence Length = 2161 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 gctacttcgtctacctctggccaca 173 ||||||||| ||||||||||||||| Sbjct: 1577 gctacttcgactacctctggccaca 1601
>dbj|AK066212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058D20, full insert sequence Length = 1895 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 851 tgtcatggtctcatggacctt 871 ||||||||||||||||||||| Sbjct: 1670 tgtcatggtctcatggacctt 1690
>emb|CT025607.9| Mouse DNA sequence from clone RP23-451F18 on chromosome 9, complete sequence Length = 187876 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 580 ttgtgataataccctgatcaaaagc 604 ||||||||||||| ||||||||||| Sbjct: 59675 ttgtgataataccatgatcaaaagc 59699 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 161,013,523 Number of extensions: 8559550 Number of successful extensions: 159453 Number of sequences better than 10.0: 40 Number of HSP's gapped: 159441 Number of HSP's successfully gapped: 51 Length of query: 925 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 902 Effective length of database: 18,503,978,556 Effective search space: 16690588657512 Effective search space used: 16690588657512 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)