ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf14k14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AB239677.1| Hordeum vulgare HvABI1 gene for protein phosphat... 410 e-111
2dbj|AK242616.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 236 6e-59
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 236 6e-59
4dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic D... 236 6e-59
5ref|NM_001049950.1| Oryza sativa (japonica cultivar-group) Os01g... 218 1e-53
6gb|BT017295.1| Zea mays clone EL01N0315F01.c mRNA sequence 141 3e-30
7gb|AY104084.1| Zea mays PCO105468 mRNA sequence 141 3e-30
8ref|NM_001063033.1| Oryza sativa (japonica cultivar-group) Os05g... 117 4e-23
9gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 117 4e-23
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
11dbj|AK104323.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
12dbj|AK070388.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
13dbj|AK067627.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
14ref|NM_001062704.1| Oryza sativa (japonica cultivar-group) Os05g... 62 2e-06
15gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
16gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
17gb|AY107174.1| Zea mays PCO092707 mRNA sequence 62 2e-06
18emb|CT967316.8| M.truncatula DNA sequence from clone MTH2-189G21... 48 0.030
19ref|NM_001064999.1| Oryza sativa (japonica cultivar-group) Os06g... 46 0.12
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
21dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
22dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
23dbj|AK071637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
24ref|XM_523813.2| PREDICTED: Pan troglodytes protein phosphatase ... 42 1.9
25ref|XR_013438.1| PREDICTED: Macaca mulatta similar to protein ph... 42 1.9
26emb|AM262978.1| Cocos nucifera partial mRNA for phosphoprotein p... 42 1.9
27dbj|AB028995.1| Homo sapiens mRNA for KIAA1072 protein, partial cds 42 1.9
28ref|NM_014906.3| Homo sapiens protein phosphatase 1E (PP2C domai... 42 1.9
29gb|AF520614.1| Homo sapiens partner of PIX 1 (POPX1) mRNA, compl... 42 1.9
30gb|AC100832.2| Homo sapiens chromosome 17, clone RP11-579O24, co... 42 1.9
31gb|AC012168.10| Homo sapiens chromosome 10 clone RP11-79I23, com... 42 1.9
32gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromoso... 42 1.9
33gb|AF260269.1|AF260269 Homo sapiens PP2CH mRNA, complete cds 42 1.9
34emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq... 42 1.9
35emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chrom... 42 1.9
36emb|AL031747.9|PFMAL1P4 Plasmodium falciparum DNA from MAL1P4, c... 42 1.9
37emb|CR749253.1| Homo sapiens mRNA; cDNA DKFZp781F1422 (from clon... 42 1.9
38gb|AC005207.2| Homo sapiens chromosome 17, clone RP5-1081P3, com... 42 1.9
39gb|AF466200.2| Sorghum bicolor putative protein kinase gene, par... 42 1.9
40emb|CT573028.11| M.truncatula DNA sequence from clone MTH2-51N20... 42 1.9
41emb|CT737142.2| CH251-5K7, complete sequence 40 7.4
42gb|DQ230990.1| Homo sapiens peroxiredoxin 6 (PRDX6) gene, comple... 40 7.4
43gb|AC146437.3| Pan troglodytes BAC clone RP43-15J3 from 7, compl... 40 7.4
44gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 7.4
45gb|AC004451.2| Homo sapiens PAC clone RP4-789N1 from 7, complete... 40 7.4
46emb|AL139142.10| Human DNA sequence from clone RP3-436N22 on chr... 40 7.4
47ref|NM_001013394.1| Gallus gallus similar to protein phosphatase... 40 7.4
48gb|AC112492.3| Homo sapiens X BAC RP11-12D5 (Roswell Park Cancer... 40 7.4
49emb|CR523416.1| Gallus gallus finished cDNA, clone ChEST904p5 40 7.4
50emb|CT033850.3| RP43-011K05, complete sequence 40 7.4
51ref|XM_728428.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.4
52ref|XM_738652.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.4

>dbj|AB239677.1| Hordeum vulgare HvABI1 gene for protein phosphatase 2C, partial cds
          Length = 754
 Score =  410 bits (207), Expect = e-111
 Identities = 207/207 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgaaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgaaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatg 607

                                                                       
Query: 61  aagaggtatgcgatgttgcccgcaagcgaatactcttatggcataaaaagaatggggtaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aagaggtatgcgatgttgcccgcaagcgaatactcttatggcataaaaagaatggggtaa 667

                                                                       
Query: 121 acttgtcatccgcccaacgtagcggtgactccccagatccagcggctcaagcagctgctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 acttgtcatccgcccaacgtagcggtgactccccagatccagcggctcaagcagctgctg 727

                                      
Query: 181 aatgcttgtcgaagcttgctctccaga 207
           |||||||||||||||||||||||||||
Sbjct: 728 aatgcttgtcgaagcttgctctccaga 754



to top

>dbj|AK242616.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090017C19, full
            insert sequence
          Length = 1564

 Score =  236 bits (119), Expect = 6e-59
 Identities = 298/354 (84%), Gaps = 4/354 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    aaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaa 62
            |||||||| || |||||  |||||||||||||||| |||||||| ||  |||| || |||
Sbjct: 915  aaggatgacgaatgtctcgttcttgctagtgatggtctctgggacgtcatgtcaaacgaa 974

                                                                        
Query: 63   gaggtatgcgatgttgcccgcaagcgaatactcttatggcataaaaagaatggggtaaac 122
            ||||||||||||||||| ||||||||||||||  | ||||| || ||||||||   ||||
Sbjct: 975  gaggtatgcgatgttgctcgcaagcgaatactgctgtggcacaagaagaatggcacaaac 1034

                                                                        
Query: 123  ttgtcatccgcccaacgtagcggtgactccccagatccagcggctcaagcagctgctgaa 182
                |||| ||||  || |||||||||||  ||||||| || ||| ||||||||||||| 
Sbjct: 1035 ccagcatcagccccgcgaagcggtgactcgtcagatccggcagctgaagcagctgctgag 1094

                                                                        
Query: 183  tgcttgtcgaagcttgctctccagaaggggagcaaggacaacatcacggttattgtggta 242
            |||||||||||||||||||||||||||||||||||||||||||| |  || ||||| || 
Sbjct: 1095 tgcttgtcgaagcttgctctccagaaggggagcaaggacaacattagcgtcattgtcgtt 1154

                                                                        
Query: 243  gacctcaaggcgcagaggaagttcaagagcaaaacttaaatcatcttgcttgatggacag 302
            ||||||||||| || |||||||||||||||||||  |||  |||||| ||||||| ||||
Sbjct: 1155 gacctcaaggcacataggaagttcaagagcaaaagctaa--catctt-cttgatgaacag 1211

                                                                  
Query: 303  cctgtgtgaca-aattcctaggaatctatatagatttggagaatccaaattcga 355
            |    |||||| |||| ||||| ||||| | |||||||||||||||||||||||
Sbjct: 1212 caacagtgacagaatttctagggatctacagagatttggagaatccaaattcga 1265



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 430  ccaagggctgtattcctgtatacagtacagatt 462
            ||||||||||||||| ||||||| |||||||||
Sbjct: 1342 ccaagggctgtattcatgtatacggtacagatt 1374



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  236 bits (119), Expect = 6e-59
 Identities = 298/354 (84%), Gaps = 4/354 (1%)
 Strand = Plus / Plus

                                                                            
Query: 3        aaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaa 62
                |||||||| || |||||  |||||||||||||||| |||||||| ||  |||| || |||
Sbjct: 22619556 aaggatgacgaatgtctcgttcttgctagtgatggtctctgggacgtcatgtcaaacgaa 22619615

                                                                            
Query: 63       gaggtatgcgatgttgcccgcaagcgaatactcttatggcataaaaagaatggggtaaac 122
                ||||||||||||||||| ||||||||||||||  | ||||| || ||||||||   ||||
Sbjct: 22619616 gaggtatgcgatgttgctcgcaagcgaatactgctgtggcacaagaagaatggcacaaac 22619675

                                                                            
Query: 123      ttgtcatccgcccaacgtagcggtgactccccagatccagcggctcaagcagctgctgaa 182
                    |||| ||||  || |||||||||||  ||||||| || ||| ||||||||||||| 
Sbjct: 22619676 ccagcatcagccccgcgaagcggtgactcgtcagatccggcagctgaagcagctgctgag 22619735

                                                                            
Query: 183      tgcttgtcgaagcttgctctccagaaggggagcaaggacaacatcacggttattgtggta 242
                |||||||||||||||||||||||||||||||||||||||||||| |  || ||||| || 
Sbjct: 22619736 tgcttgtcgaagcttgctctccagaaggggagcaaggacaacattagcgtcattgtcgtt 22619795

                                                                            
Query: 243      gacctcaaggcgcagaggaagttcaagagcaaaacttaaatcatcttgcttgatggacag 302
                ||||||||||| || |||||||||||||||||||  |||  |||||| ||||||| ||||
Sbjct: 22619796 gacctcaaggcacataggaagttcaagagcaaaagctaa--catctt-cttgatgaacag 22619852

                                                                      
Query: 303      cctgtgtgaca-aattcctaggaatctatatagatttggagaatccaaattcga 355
                |    |||||| |||| ||||| ||||| | |||||||||||||||||||||||
Sbjct: 22619853 caacagtgacagaatttctagggatctacagagatttggagaatccaaattcga 22619906



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 430      ccaagggctgtattcctgtatacagtacagatt 462
                ||||||||||||||| ||||||| |||||||||
Sbjct: 22619983 ccaagggctgtattcatgtatacggtacagatt 22620015



to top

>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1097D05
          Length = 144879

 Score =  236 bits (119), Expect = 6e-59
 Identities = 298/354 (84%), Gaps = 4/354 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      aaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaa 62
              |||||||| || |||||  |||||||||||||||| |||||||| ||  |||| || |||
Sbjct: 135293 aaggatgacgaatgtctcgttcttgctagtgatggtctctgggacgtcatgtcaaacgaa 135352

                                                                          
Query: 63     gaggtatgcgatgttgcccgcaagcgaatactcttatggcataaaaagaatggggtaaac 122
              ||||||||||||||||| ||||||||||||||  | ||||| || ||||||||   ||||
Sbjct: 135353 gaggtatgcgatgttgctcgcaagcgaatactgctgtggcacaagaagaatggcacaaac 135412

                                                                          
Query: 123    ttgtcatccgcccaacgtagcggtgactccccagatccagcggctcaagcagctgctgaa 182
                  |||| ||||  || |||||||||||  ||||||| || ||| ||||||||||||| 
Sbjct: 135413 ccagcatcagccccgcgaagcggtgactcgtcagatccggcagctgaagcagctgctgag 135472

                                                                          
Query: 183    tgcttgtcgaagcttgctctccagaaggggagcaaggacaacatcacggttattgtggta 242
              |||||||||||||||||||||||||||||||||||||||||||| |  || ||||| || 
Sbjct: 135473 tgcttgtcgaagcttgctctccagaaggggagcaaggacaacattagcgtcattgtcgtt 135532

                                                                          
Query: 243    gacctcaaggcgcagaggaagttcaagagcaaaacttaaatcatcttgcttgatggacag 302
              ||||||||||| || |||||||||||||||||||  |||  |||||| ||||||| ||||
Sbjct: 135533 gacctcaaggcacataggaagttcaagagcaaaagctaa--catctt-cttgatgaacag 135589

                                                                    
Query: 303    cctgtgtgaca-aattcctaggaatctatatagatttggagaatccaaattcga 355
              |    |||||| |||| ||||| ||||| | |||||||||||||||||||||||
Sbjct: 135590 caacagtgacagaatttctagggatctacagagatttggagaatccaaattcga 135643



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 430    ccaagggctgtattcctgtatacagtacagatt 462
              ||||||||||||||| ||||||| |||||||||
Sbjct: 135720 ccaagggctgtattcatgtatacggtacagatt 135752



to top

>ref|NM_001049950.1| Oryza sativa (japonica cultivar-group) Os01g0583100 (Os01g0583100)
            mRNA, complete cds
          Length = 1404

 Score =  218 bits (110), Expect = 1e-53
 Identities = 233/274 (85%)
 Strand = Plus / Plus

                                                                        
Query: 3    aaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaa 62
            |||||||| || |||||  |||||||||||||||| |||||||| ||  |||| || |||
Sbjct: 1126 aaggatgacgaatgtctcgttcttgctagtgatggtctctgggacgtcatgtcaaacgaa 1185

                                                                        
Query: 63   gaggtatgcgatgttgcccgcaagcgaatactcttatggcataaaaagaatggggtaaac 122
            ||||||||||||||||| ||||||||||||||  | ||||| || ||||||||   ||||
Sbjct: 1186 gaggtatgcgatgttgctcgcaagcgaatactgctgtggcacaagaagaatggcacaaac 1245

                                                                        
Query: 123  ttgtcatccgcccaacgtagcggtgactccccagatccagcggctcaagcagctgctgaa 182
                |||| ||||  || |||||||||||  ||||||| || ||| ||||||||||||| 
Sbjct: 1246 ccagcatcagccccgcgaagcggtgactcgtcagatccggcagctgaagcagctgctgag 1305

                                                                        
Query: 183  tgcttgtcgaagcttgctctccagaaggggagcaaggacaacatcacggttattgtggta 242
            |||||||||||||||||||||||||||||||||||||||||||| |  || ||||| || 
Sbjct: 1306 tgcttgtcgaagcttgctctccagaaggggagcaaggacaacattagcgtcattgtcgtt 1365

                                              
Query: 243  gacctcaaggcgcagaggaagttcaagagcaaaa 276
            ||||||||||| || |||||||||||||||||||
Sbjct: 1366 gacctcaaggcacataggaagttcaagagcaaaa 1399



to top

>gb|BT017295.1| Zea mays clone EL01N0315F01.c mRNA sequence
          Length = 1444

 Score =  141 bits (71), Expect = 3e-30
 Identities = 227/279 (81%)
 Strand = Plus / Plus

                                                                        
Query: 3    aaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaa 62
            |||||||| ||||| ||||||||||| ||||| ||||||||||||||| |||| ||||||
Sbjct: 923  aaggatgacgagtgccttattcttgccagtgacggcctctgggatgtaatgtcaaatgaa 982

                                                                        
Query: 63   gaggtatgcgatgttgcccgcaagcgaatactcttatggcataaaaagaatggggtaaac 122
            |||||||| ||  | || |||||||| |||||  | ||||| ||||||||  |   || |
Sbjct: 983  gaggtatgtgaaatcgctcgcaagcggatacttctgtggcacaaaaagaacagcacaagc 1042

                                                                        
Query: 123  ttgtcatccgcccaacgtagcggtgactccccagatccagcggctcaagcagctgctgaa 182
            |  ||||| |||| |||    ||||| ||| ||||  |||| |||||||| |||||||||
Sbjct: 1043 tcatcatcagccccacgggttggtgattccgcagactcagccgctcaagcggctgctgaa 1102

                                                                        
Query: 183  tgcttgtcgaagcttgctctccagaaggggagcaaggacaacatcacggttattgtggta 242
            |||||||||||| ||||||| |||||||||||||| |||||||| || ||  | || || 
Sbjct: 1103 tgcttgtcgaagtttgctcttcagaaggggagcaaagacaacattactgtcgtggtagtt 1162

                                                   
Query: 243  gacctcaaggcgcagaggaagttcaagagcaaaacttaa 281
            || || || || ||| | |||||||||||||||||||||
Sbjct: 1163 gatctgaaagcacagcgcaagttcaagagcaaaacttaa 1201



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                       
Query: 428  tgccaagggctgtatt-cctgtatacagtacagattacgaaat 469
            |||||||||||||||| || |||||| ||||||||| ||||||
Sbjct: 1332 tgccaagggctgtattccccgtatacggtacagattgcgaaat 1374



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 375  tagtacattacttagcccagttcgttattttct 407
            |||| |||| ||||||||||||| |||||||||
Sbjct: 1282 tagtgcattgcttagcccagttccttattttct 1314



to top

>gb|AY104084.1| Zea mays PCO105468 mRNA sequence
          Length = 1247

 Score =  141 bits (71), Expect = 3e-30
 Identities = 227/279 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   aaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaa 62
           |||||||| ||||| ||||||||||| ||||| ||||||||||||||| |||| ||||||
Sbjct: 618 aaggatgacgagtgccttattcttgccagtgacggcctctgggatgtaatgtcaaatgaa 677

                                                                       
Query: 63  gaggtatgcgatgttgcccgcaagcgaatactcttatggcataaaaagaatggggtaaac 122
           |||||||| ||  | || |||||||| |||||  | ||||| ||||||||  |   || |
Sbjct: 678 gaggtatgtgaaatcgctcgcaagcggatacttctgtggcacaaaaagaacagcacaagc 737

                                                                       
Query: 123 ttgtcatccgcccaacgtagcggtgactccccagatccagcggctcaagcagctgctgaa 182
           |  ||||| |||| |||    ||||||||| ||||  |||| |||||||| ||| |||||
Sbjct: 738 tcatcatcagccccacgggttggtgactccgcagactcagccgctcaagcggctactgaa 797

                                                                       
Query: 183 tgcttgtcgaagcttgctctccagaaggggagcaaggacaacatcacggttattgtggta 242
           |||||||| ||||||||||| |||||||||||||| |||||||| || ||  | || || 
Sbjct: 798 tgcttgtcaaagcttgctcttcagaaggggagcaaagacaacattactgtcgtggtagtt 857

                                                  
Query: 243 gacctcaaggcgcagaggaagttcaagagcaaaacttaa 281
           || || || || ||| | |||||||||||||||||||||
Sbjct: 858 gatctgaaagcacagcgcaagttcaagagcaaaacttaa 896



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 374  ttagtacattacttagcccagttcgttatttt 405
            ||||| |||| ||||||||||||| |||||||
Sbjct: 976  ttagtgcattgcttagcccagttccttatttt 1007



to top

>ref|NM_001063033.1| Oryza sativa (japonica cultivar-group) Os05g0592800 (Os05g0592800)
            mRNA, complete cds
          Length = 2168

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                        
Query: 141  agcggtgactccccagatccagcggctcaagcagctgctgaatgcttgtcgaagcttgct 200
            |||||||| ||  ||||||| || |||||||||||||| || | |||||| |||||||| 
Sbjct: 1617 agcggtgattcttcagatccggctgctcaagcagctgccgactacttgtccaagcttgcc 1676

                                                                        
Query: 201  ctccagaaggggagcaaggacaacatcacggttattgtggtagacctcaaggcgcagagg 260
            || |||||||||||||||||||||||||| ||  ||||  | ||||||||||| || |||
Sbjct: 1677 ctacagaaggggagcaaggacaacatcactgtcgttgtaattgacctcaaggcacatagg 1736

                           
Query: 261  aagttcaagagcaaa 275
            |||||||||||||||
Sbjct: 1737 aagttcaagagcaaa 1751



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                        
Query: 9    gatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaagaggta 68
            ||||| || ||||||||||| ||||||||||| ||||||||| ||||||| |||||||| 
Sbjct: 1479 gatgattgccttattcttgcaagtgatggcctttgggatgtaatgtcgaacgaagaggtc 1538

                              
Query: 69   tgcgatgttgcccgcaag 86
            || |||| ||| ||||||
Sbjct: 1539 tgtgatgctgctcgcaag 1556



to top

>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                         
Query: 141   agcggtgactccccagatccagcggctcaagcagctgctgaatgcttgtcgaagcttgct 200
             |||||||| ||  ||||||| || |||||||||||||| || | |||||| |||||||| 
Sbjct: 97346 agcggtgattcttcagatccggctgctcaagcagctgccgactacttgtccaagcttgcc 97287

                                                                         
Query: 201   ctccagaaggggagcaaggacaacatcacggttattgtggtagacctcaaggcgcagagg 260
             || |||||||||||||||||||||||||| ||  ||||  | ||||||||||| || |||
Sbjct: 97286 ctacagaaggggagcaaggacaacatcactgtcgttgtaattgacctcaaggcacatagg 97227

                            
Query: 261   aagttcaagagcaaa 275
             |||||||||||||||
Sbjct: 97226 aagttcaagagcaaa 97212



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                         
Query: 9     gatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaagaggta 68
             ||||| || ||||||||||| ||||||||||| ||||||||| ||||||| |||||||| 
Sbjct: 97484 gatgattgccttattcttgcaagtgatggcctttgggatgtaatgtcgaacgaagaggtc 97425

                               
Query: 69    tgcgatgttgcccgcaag 86
             || |||| ||| ||||||
Sbjct: 97424 tgtgatgctgctcgcaag 97407



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                            
Query: 141      agcggtgactccccagatccagcggctcaagcagctgctgaatgcttgtcgaagcttgct 200
                |||||||| ||  ||||||| || |||||||||||||| || | |||||| |||||||| 
Sbjct: 29318689 agcggtgattcttcagatccggctgctcaagcagctgccgactacttgtccaagcttgcc 29318630

                                                                            
Query: 201      ctccagaaggggagcaaggacaacatcacggttattgtggtagacctcaaggcgcagagg 260
                || |||||||||||||||||||||||||| ||  ||||  | ||||||||||| || |||
Sbjct: 29318629 ctacagaaggggagcaaggacaacatcactgtcgttgtaattgacctcaaggcacatagg 29318570

                               
Query: 261      aagttcaagagcaaa 275
                |||||||||||||||
Sbjct: 29318569 aagttcaagagcaaa 29318555



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                            
Query: 9        gatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaagaggta 68
                ||||| || ||||||||||| ||||||||||| ||||||||| ||||||| |||||||| 
Sbjct: 29318827 gatgattgccttattcttgcaagtgatggcctttgggatgtaatgtcgaacgaagaggtc 29318768

                                  
Query: 69       tgcgatgttgcccgcaag 86
                || |||| ||| ||||||
Sbjct: 29318767 tgtgatgctgctcgcaag 29318750



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1        cgaaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatg 60
                ||||||||||||| ||||||||||| || || ||||| || ||||||||  |||| ||||
Sbjct: 26498958 cgaaggatgatgactgtcttattctagcaagcgatgggctgtgggatgttgtgtcaaatg 26498899

                           
Query: 61       aagaggtatgc 71
                |||||| ||||
Sbjct: 26498898 aagaggcatgc 26498888



to top

>dbj|AK104323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G08, full
            insert sequence
          Length = 1916

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                        
Query: 141  agcggtgactccccagatccagcggctcaagcagctgctgaatgcttgtcgaagcttgct 200
            |||||||| ||  ||||||| || |||||||||||||| || | |||||| |||||||| 
Sbjct: 1578 agcggtgattcttcagatccggctgctcaagcagctgccgactacttgtccaagcttgcc 1637

                                                                        
Query: 201  ctccagaaggggagcaaggacaacatcacggttattgtggtagacctcaaggcgcagagg 260
            || |||||||||||||||||||||||||| ||  ||||  | ||||||||||| || |||
Sbjct: 1638 ctacagaaggggagcaaggacaacatcactgtcgttgtaattgacctcaaggcacatagg 1697

                           
Query: 261  aagttcaagagcaaa 275
            |||||||||||||||
Sbjct: 1698 aagttcaagagcaaa 1712



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                        
Query: 9    gatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaagaggta 68
            ||||| || ||||||||||| ||||||||||| ||||||||| ||||||| |||||||| 
Sbjct: 1440 gatgattgccttattcttgcaagtgatggcctttgggatgtaatgtcgaacgaagaggtc 1499

                              
Query: 69   tgcgatgttgcccgcaag 86
            || |||| ||| ||||||
Sbjct: 1500 tgtgatgctgctcgcaag 1517



to top

>dbj|AK070388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054G02, full
            insert sequence
          Length = 2179

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                        
Query: 141  agcggtgactccccagatccagcggctcaagcagctgctgaatgcttgtcgaagcttgct 200
            |||||||| ||  ||||||| || |||||||||||||| || | |||||| |||||||| 
Sbjct: 1611 agcggtgattcttcagatccggctgctcaagcagctgccgactacttgtccaagcttgcc 1670

                                                                        
Query: 201  ctccagaaggggagcaaggacaacatcacggttattgtggtagacctcaaggcgcagagg 260
            || |||||||||||||||||||||||||| ||  ||||  | ||||||||||| || |||
Sbjct: 1671 ctacagaaggggagcaaggacaacatcactgtcgttgtaattgacctcaaggcacatagg 1730

                           
Query: 261  aagttcaagagcaaa 275
            |||||||||||||||
Sbjct: 1731 aagttcaagagcaaa 1745



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                        
Query: 9    gatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaagaggta 68
            ||||| || ||||||||||| ||||||||||| ||||||||| ||||||| |||||||| 
Sbjct: 1473 gatgattgccttattcttgcaagtgatggcctttgggatgtaatgtcgaacgaagaggtc 1532

                              
Query: 69   tgcgatgttgcccgcaag 86
            || |||| ||| ||||||
Sbjct: 1533 tgtgatgctgctcgcaag 1550



to top

>dbj|AK067627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113I18, full
            insert sequence
          Length = 2169

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                        
Query: 141  agcggtgactccccagatccagcggctcaagcagctgctgaatgcttgtcgaagcttgct 200
            |||||||| ||  ||||||| || |||||||||||||| || | |||||| |||||||| 
Sbjct: 1618 agcggtgattcttcagatccggctgctcaagcagctgccgactacttgtccaagcttgcc 1677

                                                                        
Query: 201  ctccagaaggggagcaaggacaacatcacggttattgtggtagacctcaaggcgcagagg 260
            || |||||||||||||||||||||||||| ||  ||||  | ||||||||||| || |||
Sbjct: 1678 ctacagaaggggagcaaggacaacatcactgtcgttgtaattgacctcaaggcacatagg 1737

                           
Query: 261  aagttcaagagcaaa 275
            |||||||||||||||
Sbjct: 1738 aagttcaagagcaaa 1752



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                        
Query: 9    gatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaagaggta 68
            ||||| || ||||||||||| ||||||||||| ||||||||| ||||||| |||||||| 
Sbjct: 1480 gatgattgccttattcttgcaagtgatggcctttgggatgtaatgtcgaacgaagaggtc 1539

                              
Query: 69   tgcgatgttgcccgcaag 86
            || |||| ||| ||||||
Sbjct: 1540 tgtgatgctgctcgcaag 1557



to top

>ref|NM_001062704.1| Oryza sativa (japonica cultivar-group) Os05g0537400 (Os05g0537400)
           mRNA, complete cds
          Length = 714

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgaaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatg 60
           ||||||||||||| ||||||||||| || || ||||| || ||||||||  |||| ||||
Sbjct: 434 cgaaggatgatgactgtcttattctagcaagcgatgggctgtgggatgttgtgtcaaatg 493

                      
Query: 61  aagaggtatgc 71
           |||||| ||||
Sbjct: 494 aagaggcatgc 504



to top

>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0052K01, complete sequence
          Length = 144395

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1     cgaaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatg 60
             ||||||||||||| ||||||||||| || || ||||| || ||||||||  |||| ||||
Sbjct: 12433 cgaaggatgatgactgtcttattctagcaagcgatgggctgtgggatgttgtgtcaaatg 12374

                        
Query: 61    aagaggtatgc 71
             |||||| ||||
Sbjct: 12373 aagaggcatgc 12363



to top

>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
              complete sequence
          Length = 147704

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                          
Query: 1      cgaaggatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatg 60
              ||||||||||||| ||||||||||| || || ||||| || ||||||||  |||| ||||
Sbjct: 143649 cgaaggatgatgactgtcttattctagcaagcgatgggctgtgggatgttgtgtcaaatg 143590

                         
Query: 61     aagaggtatgc 71
              |||||| ||||
Sbjct: 143589 aagaggcatgc 143579



to top

>gb|AY107174.1| Zea mays PCO092707 mRNA sequence
          Length = 909

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 21  attcttgctagtgatggcctctgggatgtattgtcgaatgaagaggtatgc 71
           |||||||| |||||||| || ||||||||| ||||||||||||||| ||||
Sbjct: 323 attcttgcaagtgatgggctgtgggatgtagtgtcgaatgaagaggcatgc 373



to top

>emb|CT967316.8| M.truncatula DNA sequence from clone MTH2-189G21 on chromosome 3,
             complete sequence
          Length = 127758

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 6     gatgatgagtgtcttattcttgctagtgatggcctctgggatgtattgtcgaatgaagag 65
             |||||||| ||||| ||| | |||||||||||| | ||||||||  || | |||||||||
Sbjct: 16801 gatgatgaatgtctcattttggctagtgatggcttgtgggatgtcatgacaaatgaagag 16860

                     
Query: 66    gtatgcga 73
             | ||||||
Sbjct: 16861 gcatgcga 16868



to top

>ref|NM_001064999.1| Oryza sativa (japonica cultivar-group) Os06g0698300 (Os06g0698300)
           mRNA, complete cds
          Length = 1282

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 24  cttgctagtgatggcctctggga 46
           |||||||||||||||||||||||
Sbjct: 773 cttgctagtgatggcctctggga 795



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 24       cttgctagtgatggcctctggga 46
                |||||||||||||||||||||||
Sbjct: 28825335 cttgctagtgatggcctctggga 28825313



to top

>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0028E05
          Length = 157631

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 24     cttgctagtgatggcctctggga 46
              |||||||||||||||||||||||
Sbjct: 133110 cttgctagtgatggcctctggga 133088



to top

>dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           PAC clone:P0545E05
          Length = 163229

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 24  cttgctagtgatggcctctggga 46
           |||||||||||||||||||||||
Sbjct: 421 cttgctagtgatggcctctggga 399



to top

>dbj|AK071637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101G03, full
           insert sequence
          Length = 1283

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 24  cttgctagtgatggcctctggga 46
           |||||||||||||||||||||||
Sbjct: 774 cttgctagtgatggcctctggga 796



to top

>ref|XM_523813.2| PREDICTED: Pan troglodytes protein phosphatase 1E (PPM1E), mRNA
          Length = 6410

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  aacatcacggttattgtggta 242
            |||||||||||||||||||||
Sbjct: 1450 aacatcacggttattgtggta 1470



to top

>ref|XR_013438.1| PREDICTED: Macaca mulatta similar to protein phosphatase 1E
            (LOC711012), mRNA
          Length = 6517

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  aacatcacggttattgtggta 242
            |||||||||||||||||||||
Sbjct: 1588 aacatcacggttattgtggta 1608



to top

>emb|AM262978.1| Cocos nucifera partial mRNA for phosphoprotein phosphatase (pp2C
           gene)
          Length = 925

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 17  tcttattcttgctagtgatggcctctgggatgt 49
           |||||| ||||| |||||||| |||||||||||
Sbjct: 842 tcttatccttgcaagtgatggactctgggatgt 874



to top

>dbj|AB028995.1| Homo sapiens mRNA for KIAA1072 protein, partial cds
          Length = 5035

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  aacatcacggttattgtggta 242
            |||||||||||||||||||||
Sbjct: 1571 aacatcacggttattgtggta 1591



to top

>ref|NM_014906.3| Homo sapiens protein phosphatase 1E (PP2C domain containing) (PPM1E),
            mRNA
          Length = 6540

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  aacatcacggttattgtggta 242
            |||||||||||||||||||||
Sbjct: 1565 aacatcacggttattgtggta 1585



to top

>gb|AF520614.1| Homo sapiens partner of PIX 1 (POPX1) mRNA, complete cds
          Length = 2274

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  aacatcacggttattgtggta 242
            |||||||||||||||||||||
Sbjct: 1444 aacatcacggttattgtggta 1464



to top

>gb|AC100832.2| Homo sapiens chromosome 17, clone RP11-579O24, complete sequence
          Length = 190107

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   aacatcacggttattgtggta 242
             |||||||||||||||||||||
Sbjct: 25009 aacatcacggttattgtggta 24989



to top

>gb|AC012168.10| Homo sapiens chromosome 10 clone RP11-79I23, complete sequence
          Length = 175323

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 313   aaattcctaggaatctatata 333
             |||||||||||||||||||||
Sbjct: 22898 aaattcctaggaatctatata 22918



to top

>gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromosome 7, complete sequence
          Length = 196949

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 222    aacatcacggttattgtggta 242
              |||||||||||||||||||||
Sbjct: 191428 aacatcacggttattgtggta 191408



to top

>gb|AF260269.1|AF260269 Homo sapiens PP2CH mRNA, complete cds
          Length = 6572

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  aacatcacggttattgtggta 242
            |||||||||||||||||||||
Sbjct: 1598 aacatcacggttattgtggta 1618



to top

>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   ttcgttattttcttccttttt 415
             |||||||||||||||||||||
Sbjct: 28551 ttcgttattttcttccttttt 28571



to top

>emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5
          Length = 281723

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 395    ttcgttattttcttccttttt 415
              |||||||||||||||||||||
Sbjct: 220206 ttcgttattttcttccttttt 220186



to top

>emb|AL031747.9|PFMAL1P4 Plasmodium falciparum DNA from MAL1P4, complete sequence
          Length = 66442

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   ttcgttattttcttccttttt 415
             |||||||||||||||||||||
Sbjct: 52581 ttcgttattttcttccttttt 52601



to top

>emb|CR749253.1| Homo sapiens mRNA; cDNA DKFZp781F1422 (from clone DKFZp781F1422)
          Length = 4597

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 222 aacatcacggttattgtggta 242
           |||||||||||||||||||||
Sbjct: 807 aacatcacggttattgtggta 827



to top

>gb|AC005207.2| Homo sapiens chromosome 17, clone RP5-1081P3, complete sequence
          Length = 59412

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  aacatcacggttattgtggta 242
            |||||||||||||||||||||
Sbjct: 5480 aacatcacggttattgtggta 5500



to top

>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2,
              fertilization-independent endosperm proteins, hypothetical
              protein, putative non-LTR retroelement reverse
              transcriptase, OCL5 protein, tryptophan synthase
              beta-subunit, hypothetical proteins, putative AP
              endonuclease, putative RNA polymerase II complex component
              SRB7, putative beta-1,3-glucanase, hypothetical protein,
              TNP2-like protein, hypothetical protein, putative
              phosphate/phosphoenolpyruvate translocator, putative
              protein, hypothetical proteins, putative
              galactosyltransferase family, hypothetical protein,
              putative cytochrome P450 family, putative lipid transfer
              protein, putative photoreceptor-interacting protein, and
              hypothetical protein genes, complete cds; and hypothetical
              protein gene, partial cds
          Length = 202197

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 25     ttgctagtgatggcctctgggatgt 49
              ||||||||||||| |||||||||||
Sbjct: 153490 ttgctagtgatggactctgggatgt 153466



to top

>emb|CT573028.11| M.truncatula DNA sequence from clone MTH2-51N20 on chromosome 3,
             complete sequence
          Length = 116350

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 22    ttcttgctagtgatggcctctgggatgta 50
             ||||||| |||||||| ||||||||||||
Sbjct: 68266 ttcttgcaagtgatggactctgggatgta 68294



to top

>emb|CT737142.2| CH251-5K7, complete sequence
          Length = 178798

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ttcaagagcaaaacttaaat 283
             ||||||||||||||||||||
Sbjct: 17673 ttcaagagcaaaacttaaat 17654



to top

>gb|DQ230990.1| Homo sapiens peroxiredoxin 6 (PRDX6) gene, complete cds
          Length = 14613

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   tattcttgctagtgatggcc 39
            ||||||||||||||||||||
Sbjct: 2869 tattcttgctagtgatggcc 2888



to top

>gb|AC146437.3| Pan troglodytes BAC clone RP43-15J3 from 7, complete sequence
          Length = 163637

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   gttattttcttcctttttca 417
             ||||||||||||||||||||
Sbjct: 17230 gttattttcttcctttttca 17249



to top

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 152     cccagatccagcggctcaagcagc 175
               ||||||||||||||| ||||||||
Sbjct: 4209309 cccagatccagcggcgcaagcagc 4209332



to top

>gb|AC004451.2| Homo sapiens PAC clone RP4-789N1 from 7, complete sequence
          Length = 108642

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   gttattttcttcctttttca 417
             ||||||||||||||||||||
Sbjct: 22339 gttattttcttcctttttca 22358



to top

>emb|AL139142.10| Human DNA sequence from clone RP3-436N22 on chromosome 1q24.1-25.3
            Contains the PRDX6 gene for peroxiredoxin 6, gene
            MGC43026, a novel gene, the 3' end of a novel gene
            (FLJ45235) and two CpG islands, complete sequence
          Length = 159771

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   tattcttgctagtgatggcc 39
            ||||||||||||||||||||
Sbjct: 4168 tattcttgctagtgatggcc 4187



to top

>ref|NM_001013394.1| Gallus gallus similar to protein phosphatase 2C eta (LOC415941), mRNA
 emb|AJ719435.1| Gallus gallus mRNA for hypothetical protein, clone 2e20
          Length = 2471

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 32   tgatggcctctgggatgtattgtcgaatgaagaggt 67
            ||||||||| |||||||| ||||  |||||||||||
Sbjct: 1160 tgatggcctttgggatgttttgtgcaatgaagaggt 1195



to top

>gb|AC112492.3| Homo sapiens X BAC RP11-12D5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 116568

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   ttcaagagcaaaacttaaat 283
             ||||||||||||||||||||
Sbjct: 52307 ttcaagagcaaaacttaaat 52326



to top

>emb|CR523416.1| Gallus gallus finished cDNA, clone ChEST904p5
          Length = 1436

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 32  tgatggcctctgggatgtattgtcgaatgaagaggt 67
           ||||||||| |||||||| ||||  |||||||||||
Sbjct: 865 tgatggcctttgggatgttttgtgcaatgaagaggt 900



to top

>emb|CT033850.3| RP43-011K05, complete sequence
          Length = 158402

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ttcaagagcaaaacttaaat 283
             ||||||||||||||||||||
Sbjct: 17662 ttcaagagcaaaacttaaat 17643



to top

>ref|XM_728428.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301029.00.0)
           partial mRNA
          Length = 390

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 405 tcttcctttttcaccatttg 424
           ||||||||||||||||||||
Sbjct: 36  tcttcctttttcaccatttg 17



to top

>ref|XM_738652.1| Plasmodium chabaudi chabaudi hypothetical protein (PC001011.02.0)
            partial mRNA
          Length = 3822

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 405  tcttcctttttcaccatttg 424
            ||||||||||||||||||||
Sbjct: 2127 tcttcctttttcaccatttg 2108


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 87,920,724
Number of extensions: 4747472
Number of successful extensions: 115474
Number of sequences better than 10.0: 52
Number of HSP's gapped: 115474
Number of HSP's successfully gapped: 79
Length of query: 505
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 483
Effective length of database: 18,508,616,841
Effective search space: 8939661934203
Effective search space used: 8939661934203
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top