>Q08601:MCA1_YEAST Metacaspase-1 precursor - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 453
 Score =  174 bits (440), Expect = 1e-42
 Identities = 112/322 (34%), Positives = 169/322 (52%), Gaps = 42/322 (13%)
 Frame = +2

Query: 260  GKKRAVLVGIKYTKTRACELRGPINDVKCMRYILTERFGFANDCVLILTDEERDPCRQPT 439
            G+++A+++GI Y  ++  +LRG IND   +   LT  +G+++D ++ILTD++ D  R PT
Sbjct: 155  GRRKALIIGINYIGSKN-QLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPT 213

Query: 440  KANIRMAMHWLVQGCSSGDSLVFQFSGAGAQVPDCDGDERDGMDEAICPVDSFQQGPILD 619
            +AN+  AM WLV+     DSL   +SG G Q  D DGDE DGMD+ I PVD   QGPI+D
Sbjct: 214  RANMIRAMQWLVKDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIID 273

Query: 620  DEINQAIVRPLVHGVKLHAIVDACHSATVLDLPYQCTFSKQYGCLR----WMD--ERPLN 781
            DE++  +V+PL  GV+L A+ D+CHS TVLDLPY  T+S + G ++    W D  +  L 
Sbjct: 274  DEMHDIMVKPLQQGVRLTALFDSCHSGTVLDLPY--TYSTK-GIIKEPNIWKDVGQDGLQ 330

Query: 782  GACKGTSGGRA------------------------------------VLISGSSNGKTQM 853
             A    +G RA                                    V++SGS + +T  
Sbjct: 331  AAISYATGNRAALIGSLGSIFKTVKGGMGNNVDRERVRQIKFSAADVVMLSGSKDNQTSA 390

Query: 854  SVLPEPNATIGALTHSFIKAVECEPRTTYGRLLTSMRTTMRAGAGNCSLQGPVGCSIRKV 1033
              + E     GA++H+FIK +  +P+ +Y  LL +MR  +   AG  S            
Sbjct: 391  DAV-EDGQNTGAMSHAFIKVMTLQPQQSYLSLLQNMRKEL---AGKYS------------ 434

Query: 1034 ANFSGVEEPQMSSACKFDINCE 1099
                  ++PQ+SS+   D+N +
Sbjct: 435  ------QKPQLSSSHPIDVNLQ 450

>Q9JWM8:MSRAB_NEIMA Peptide methionine sulfoxide reductase msrA/msrB [Includes:|
           Thioredoxin; Peptide methionine sulfoxide reductase msrA
           - Neisseria meningitidis serogroup A
          Length = 522

 Score = 32.7 bits (73), Expect = 4.1
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 794 GTSGGRAVLISGSSNGKTQMSVLPEPNATIGALTHSFIK 910
           G  G    ++ GS N    ++++ +PNA +G+L HSF K
Sbjct: 147 GKDGDVQRIVKGSINEAQALALIRDPNADLGSLKHSFYK 185

>P14930:MSRAB_NEIGO Peptide methionine sulfoxide reductase msrA/msrB [Includes:|
           Thioredoxin; Peptide methionine sulfoxide reductase msrA
           - Neisseria gonorrhoeae
          Length = 522

 Score = 32.0 bits (71), Expect = 6.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 794 GTSGGRAVLISGSSNGKTQMSVLPEPNATIGALTHSFIK 910
           G  G    ++ GS N    ++++  PNA +G+L HSF K
Sbjct: 147 GKDGDVQRIVKGSINEAQALALIRNPNADLGSLKHSFYK 185

>Q9QX96:SALL2_MOUSE Sal-like protein 2 - Mus musculus (Mouse)|
          Length = 1004

 Score = 31.6 bits (70), Expect = 9.0
 Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = -3

Query: 930 RGSHSTALMKLCVRAPMVALGSGSTLIWVFPLL----LPLMSTARPPLVPLQAPFRGRSS 763
           RG  S+   +  V A   A G G  LI   P L    LP  ST  PP  P   P  G  S
Sbjct: 117 RGEESSG--QFLVAATGTAAGGGGGLILASPKLGATPLPPESTPAPPPPPPPPPPPGVGS 174

Query: 762 IHLRHPYCLEKV 727
            HL  P  LE++
Sbjct: 175 GHLNIPLILEEL 186

>Q8PYK1:PURL_METMA Phosphoribosylformylglycinamidine synthase II - Methanosarcina mazei|
            (Methanosarcina frisia)
          Length = 716

 Score = 31.6 bits (70), Expect = 9.0
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
 Frame = +2

Query: 842  KTQMSVLPEPNATIGALTHSFIKAVE----CEPRTTYGRLLTSMRTTMRAGAGNCSLQGP 1009
            + Q+  + +P    G L  +  K +     C+PR T     T  RT +   A N +++G 
Sbjct: 409  EVQLRTVVKPGEDSGVLRITDKKGIALSCGCQPRATLLDPYTGGRTAIIENAMNLAVKGA 468

Query: 1010 VGCSIRKVANFSGVEEPQ 1063
             G +I    NF   E P+
Sbjct: 469  EGLAIVNCLNFGNPENPE 486

>Q9K1N8:MSRAB_NEIMB Peptide methionine sulfoxide reductase msrA/msrB [Includes:|
           Thioredoxin; Peptide methionine sulfoxide reductase msrA
           - Neisseria meningitidis serogroup B
          Length = 522

 Score = 31.6 bits (70), Expect = 9.0
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 818 LISGSSNGKTQMSVLPEPNATIGALTHSFIK 910
           ++ GS N    ++++ +PNA +G+L HSF K
Sbjct: 155 IVKGSINEAQALALIRDPNADLGSLKHSFYK 185

>P17678:GATA1_CHICK Erythroid transcription factor - Gallus gallus (Chicken)|
          Length = 304

 Score = 31.6 bits (70), Expect = 9.0
 Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 3/103 (2%)
 Frame = +2

Query: 47  PTHPGSSAAMNCGRGPAPATMVRCRQCSASIT---APPGARVVQCMQCCCMTRVSGVGRQ 217
           P HP S   +    GP P     C  C A+ T      G     C  C    R++G  R 
Sbjct: 87  PPHPSSGPLLPLSSGPPPCEARECVNCGATATPLWRRDGTGHYLCNACGLYHRLNGQNRP 146

Query: 218 LSVVRPIPNFGGGRGKKRAVLVGIKYTKTRACELRGPINDVKC 346
           L  +RP         K+   +     T T     R P+ D  C
Sbjct: 147 L--IRPKKRL--LVSKRAGTVCSNCQTSTTTLWRRSPMGDPVC 185


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 235,430,929
Number of extensions: 5169998
Number of successful extensions: 17160
Number of sequences better than 10.0: 7
Number of HSP's gapped: 17129
Number of HSP's successfully gapped: 8
Length of query: 495
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 378
Effective length of database: 68,593,924
Effective search space: 25928503272
Effective search space used: 25928503272
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)