ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf23h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK070777:Os03g0731100 101 7e-22
2Os09g0363800:Os09g0363800 33 0.31
3AK099892:Os02g0106900 31 0.91

>AK070777:Os03g0731100 |
          Length = 124
 Score =  101 bits (251), Expect = 7e-22
 Identities = 57/124 (45%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
 Frame = +2

Query: 62  GKLMDTIRRP---VXXXXXXXXXXXXXXVTLAQRNGVNRRCLLTLLXXXXXXXXXXXXRK 232
           GKL+DTIRRP                    LAQRNG++RR LLT L            RK
Sbjct: 1   GKLVDTIRRPFTAASTFHRSATRHLQPLAMLAQRNGISRRGLLTFLTSTAAIPEAGESRK 60

Query: 233 ALLQDYVXXXXXXXXXXXXXXXXXVYKRNYKDYFGFMEGPVREKPAEQLTESEKGILAWL 412
           ALLQ+Y+                  YKRNY+DYFG +EGP R+K  ++LTESEKGIL WL
Sbjct: 61  ALLQEYLKKSKENKEKNDKERLDDYYKRNYRDYFGLIEGPARQKNEDELTESEKGILEWL 120

Query: 413 DKNK 424
           DKNK
Sbjct: 121 DKNK 124



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>Os09g0363800:Os09g0363800 |
          Length = 472

 Score = 32.7 bits (73), Expect = 0.31
 Identities = 24/52 (46%), Positives = 26/52 (50%)
 Frame = -2

Query: 504 LHCGRNFPTEKAVSAIGLAPHMFNPSYLFLSSHARIPFSDSVSCSAGFSLTG 349
           L   R  P     +A  +AP  F P YL   S AR  FS S SCSAG SL G
Sbjct: 109 LAAARGLPPLVRATAAAIAPSSFCP-YLPRLSSAR-SFSSSTSCSAGASLGG 158



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>AK099892:Os02g0106900 |
          Length = 406

 Score = 31.2 bits (69), Expect = 0.91
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -3

Query: 137 PDALPLNDEEMKLLRPAF*LCPSVYLEAEPW 45
           P   P   +E+ LLRPA  L PS   E EPW
Sbjct: 62  PPCSPPPQQELPLLRPAAKLVPSTKEEGEPW 92


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,175,655
Number of extensions: 405326
Number of successful extensions: 921
Number of sequences better than 10.0: 3
Number of HSP's gapped: 918
Number of HSP's successfully gapped: 3
Length of query: 275
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 176
Effective length of database: 11,435,796
Effective search space: 2012700096
Effective search space used: 2012700096
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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