>LOC_Os03g52130:12003.t04539:unspliced-genomic expressed protein|
Length = 1344
Score = 79.9 bits (168), Expect(4) = 3e-34
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +2 / +1
Query: 308 YKRNYKDYFGFMEGPVREKPAEQLTESEKGILAWLDKNK* 427
YKRNY+DYFG +EGP R+K ++LTESEKGIL WLDKNK*
Sbjct: 964 YKRNYRDYFGLIEGPARQKNEDELTESEKGILEWLDKNK* 1083
Score = 58.8 bits (122), Expect(4) = 3e-34
Identities = 25/40 (62%), Positives = 26/40 (65%)
Frame = +3 / +3
Query: 129 SIWSPWLRGMELTGGASSLCWHPSQPYPRRVNQERPYCKI 248
S W WLRG L GGA SL P QPY R VNQER YCK+
Sbjct: 156 SHWPCWLRGTALAGGAFSLSSPPLQPYLRLVNQERLYCKV 275
Score = 43.2 bits (88), Expect(4) = 3e-34
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3 / +3
Query: 42 IPRLSLQVN*WTQSEGRSQQLHLFIIQRQSIWSPW 146
+P LS + N WTQS G SQQL FI Q+Q I S W
Sbjct: 60 LPWLSPKGNWWTQSGGHSQQLQRFIDQQQGISSHW 164
Score = 25.8 bits (50), Expect(4) = 3e-34
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / +1
Query: 249 M*RDQRKIKKRMTRRGGT 302
+*R+QRK KKR T+R T
Sbjct: 376 I*RNQRKTKKRTTKRYAT 429
Score = 59.3 bits (123), Expect(5) = 1e-32
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = -2 / -2
Query: 426 YLFLSSHARIPFSDSVSCSAGFSLTGPSMNPK* 328
YLFLSSH+RIPFSDSVS S+ F L GPS+ PK*
Sbjct: 1082 YLFLSSHSRIPFSDSVSSSSFFCLAGPSIRPK* 984
Score = 57.4 bits (119), Expect(5) = 1e-32
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = -1 / -3
Query: 241 Q*GLS*FTRLGYGCDGCQQSEEAPPVNSIPLSQGDQML 128
Q* LS*FT L YGC G ++SE+APP N++PLSQ Q L
Sbjct: 268 Q*SLS*FTSLRYGCSGGEESEKAPPANAVPLSQHGQWL 155
Score = 48.7 bits (100), Expect(5) = 1e-32
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -1 / -3
Query: 136 QMLCR*MMKR*SCCDRPSDCVHQFTWRLSRG 44
+M C * MKR*SCC+ P DCVHQF LS G
Sbjct: 154 EMPCC*SMKR*SCCEWPPDCVHQFPLGLSHG 62
Score = 27.6 bits (54), Expect(5) = 1e-32
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -3
Query: 335 QNNPCNSFCKRRPAS 291
Q+NPCNS C R AS
Sbjct: 991 QSNPCNSSCSSRLAS 947
Score = 27.2 bits (53), Expect(5) = 1e-32
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / -1
Query: 287 CHSFLYFPLISSHNL 243
C SFL FPLISS L
Sbjct: 414 CRSFLCFPLISSDTL 370
Score = 48.3 bits (99), Expect(4) = 3e-16
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +1 / +3
Query: 292 EAGRRLQKELQGLFWIHGRAGQREASRAAHGVGERNSRVAGQE*VAR 432
EA R LQ+ELQGL W + E R A+ VGERNSR+A QE + R
Sbjct: 948 EARRLLQEELQGLLWSDRGPCKTEE*R*AYRVGERNSRMA*QEQIVR 1088
Score = 40.9 bits (83), Expect(4) = 3e-16
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 136 GHLGSEEWS*QEVPPHSAGIRRSRTRGE*IKKGPIAR 246
GH+GSEE *QE P H + S T G *IKKG AR
Sbjct: 163 GHVGSEERH*QEGPSHFPHLHCSHT*GW*IKKGSTAR 273
Score = 31.8 bits (63), Expect(4) = 3e-16
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2 / +2
Query: 50 AQPPGKLMDTIRRP 91
AQP GKL+DTIRRP
Sbjct: 68 AQPQGKLVDTIRRP 109
Score = 24.4 bits (47), Expect(4) = 3e-16
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 244 RLCEEIKGK*RKE*Q 288
R+ EEIKGK RKE Q
Sbjct: 371 RVSEEIKGKQRKERQ 415
Score = 51.5 bits (106), Expect(2) = 1e-12
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / -1
Query: 243 CNRAFLDSLASGTAATDASRVRRHLLLTPFL*AKV 139
C+RAFLDS ASG AA + +VRR LLL PFL*A +
Sbjct: 270 CSRAFLDSPASGMAAVEVRKVRRPLLLMPFL*ANM 166
Score = 41.4 bits (84), Expect(2) = 1e-12
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = -3 / -2
Query: 134 DALPLNDEEMKLLRPAF*LCPSVYLEAEPW 45
DAL L DE +KLL A *LCP V L AEPW
Sbjct: 152 DALLLIDETLKLL*MAS*LCPPVSLGAEPW 63
Score = 41.8 bits (85), Expect(2) = 9e-05
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = -3 / -2
Query: 245 LAIGPFLIHSPRVRLRRMPAE*GGTSC*LHSSEPR*PDA 129
LA+ PFLIH P+V L+ +* G SC* SSEP P A
Sbjct: 272 LAVEPFLIHQPQVWLQWR*GK*EGPSC*CRSSEPTWPVA 156
Score = 24.0 bits (46), Expect(2) = 9e-05
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 90 GLLIVSISLPGG*AV 46
GLLIVS S P G*A+
Sbjct: 108 GLLIVSTSFPWG*AM 64
Score = 36.3 bits (73), Expect(2) = 8e-04
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +2 / +2
Query: 143 LAQRNGVNRRCLLTLLXXXXXXXXXXXXRKALLQ 244
LAQRNG++RR LLT L RKALLQ
Sbjct: 170 LAQRNGISRRGLLTFLTSTAAIPEAGESRKALLQ 271
Score = 26.3 bits (51), Expect(2) = 8e-04
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 46 HGSASR*TDGHNQ 84
HGSA R T GHNQ
Sbjct: 64 HGSAPRETGGHNQ 102
>LOC_Os05g30870:12005.t02686:unspliced-genomic serine/threonine-protein kinase NAK, putative, expressed|
Length = 7479
Score = 25.8 bits (50), Expect(2) = 1.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2 / +2
Query: 468 VSAIGLAPHMFNPSYLFLSS 409
+S++ L+PH+ P Y FL S
Sbjct: 1985 LSSLPLSPHLLFPFYFFLPS 2044
Score = 25.4 bits (49), Expect(2) = 1.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3 / +2
Query: 323 CNSFCKRRPASPCHSFLYFPLISS 252
C C P PC SF FPL S
Sbjct: 2051 CLRGCYPIPPWPCSSFFSFPLFLS 2122
>LOC_Os03g50290:12003.t04371:unspliced-genomic 14-3-3-like protein S94, putative, expressed|
Length = 4204
Score = 30.4 bits (60), Expect(2) = 7.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1 / -3
Query: 343 GRAGQREASRAAHGVGERNSRVAGQE*VARVEHVR 447
GRAG+R R + G G+R R G++ R VR
Sbjct: 350 GRAGKRGEERRSGGSGDRREREGGRKEKIRKRRVR 246
Score = 23.1 bits (44), Expect(2) = 7.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3 / -2
Query: 174 ASSLCWHPSQPYPRRVNQER 233
AS L +P+QPYP ++ R
Sbjct: 762 ASDLTSNPTQPYPPTLDLTR 703
>LOC_Os03g63420:12003.t05559:unspliced-genomic OsGrx_S14 - glutaredoxin subgroup II, expressed|
Length = 2212
Score = 31.3 bits (62), Expect = 9.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1 / -2
Query: 289 GEAGRRLQKELQGLFWIHGRAGQREASRAAHGVGERNSRVAGQE*VARVEHVRRQP 456
GE RL+ +Q ++H R G+ + E++ V V R H+RRQP
Sbjct: 423 GEHVERLEGHVQRPEYLHHRVGESALREVLGPLHEQHHLVRPHHLVQRRPHLRRQP 256
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 296,488,153
Number of extensions: 4477269
Number of successful extensions: 16955
Number of sequences better than 10.0: 18
Length of query: 275
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 226
Effective length of database: 52,856,264
Effective search space: 11945515664
Effective search space used: 11945515664
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)