>O88761:PSMD1_RAT 26S proteasome non-ATPase regulatory subunit 1 - Rattus norvegicus|
           (Rat)
          Length = 953
 Score = 30.4 bits (67), Expect = 8.8
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = -3

Query: 737 HCQVTVQNNSTNLCIMMSTPXXXXXXFCKR*NILSDQAKICATSQMRYQNDETE 576
           H Q  ++NN+T+L I+ +T        C    ++++    C T+  ++  D  E
Sbjct: 338 HLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLE 391

>Q3TXS7:PSMD1_MOUSE 26S proteasome non-ATPase regulatory subunit 1 - Mus musculus|
           (Mouse)
          Length = 953

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = -3

Query: 737 HCQVTVQNNSTNLCIMMSTPXXXXXXFCKR*NILSDQAKICATSQMRYQNDETE 576
           H Q  ++NN+T+L I+ +T        C    ++++    C T+  ++  D  E
Sbjct: 338 HLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLE 391

>Q99460:PSMD1_HUMAN 26S proteasome non-ATPase regulatory subunit 1 - Homo sapiens|
           (Human)
          Length = 953

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = -3

Query: 737 HCQVTVQNNSTNLCIMMSTPXXXXXXFCKR*NILSDQAKICATSQMRYQNDETE 576
           H Q  ++NN+T+L I+ +T        C    ++++    C T+  ++  D  E
Sbjct: 338 HLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLE 391


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 127,253,456
Number of extensions: 2522406
Number of successful extensions: 5166
Number of sequences better than 10.0: 3
Number of HSP's gapped: 5166
Number of HSP's successfully gapped: 3
Length of query: 275
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 163
Effective length of database: 69,965,399
Effective search space: 11404360037
Effective search space used: 11404360037
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)