| Clone Name | FLbaf23h04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001057699.1| Oryza sativa (japonica cultivar-group) Os03g0731100 (Os03g0731100) mRNA, partial cds Length = 578 Score = 115 bits (58), Expect = 3e-22 Identities = 160/194 (82%) Strand = Plus / Plus Query: 143 ttggctcagaggaatggagttaacaggaggtgcctcctcactctgctggcatccgtcgca 202 |||||||||||||| || ||| ||||||| |||| |||||| | || | ||| ||| Sbjct: 92 ttggctcagaggaacggcattagcaggaggggccttctcactttcctcacctccactgca 151 Query: 203 gccgtacccgaggcgagtgaatcaagaaaggccctattgcaagattatgtgaagagatca 262 ||| |||| ||||| |||||||||||||||| ||| ||||||| ||| |||||| |||| Sbjct: 152 gccatacctgaggctggtgaatcaagaaaggctctactgcaagagtatctgaagaaatca 211 Query: 263 aaggaaaataaagaaaagaatgacaaggagaggcgggacgacgtttacaaaaggaattac 322 |||||||| ||||||||||| ||||| ||||||| |||||| ||||| ||||||||| Sbjct: 212 aaggaaaacaaagaaaagaacgacaaagagaggctagacgactactacaagaggaattac 271 Query: 323 aaggattattttgg 336 | |||||| ||||| Sbjct: 272 agggattactttgg 285 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 383 gagtcggagaaaggaattctcgcgtggctggacaagaa 420 |||||||||||||||||||||| ||||| |||||||| Sbjct: 332 gagtcggagaaaggaattctcgaatggcttgacaagaa 369 Score = 44.1 bits (22), Expect = 0.79 Identities = 37/42 (88%) Strand = Plus / Plus Query: 65 aaactgatggacacaatcagaaggccggtcgcagcagcttca 106 |||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 5 aaactggtggacacaatcaggaggccattcacagcagcttca 46
>dbj|AK070777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070C11, full insert sequence Length = 579 Score = 107 bits (54), Expect = 6e-20 Identities = 159/194 (81%) Strand = Plus / Plus Query: 143 ttggctcagaggaatggagttaacaggaggtgcctcctcactctgctggcatccgtcgca 202 |||||||||||||| || ||| ||||||| |||| |||||| | || | ||| ||| Sbjct: 93 ttggctcagaggaacggcattagcaggaggggccttctcactttcctcacctccactgca 152 Query: 203 gccgtacccgaggcgagtgaatcaagaaaggccctattgcaagattatgtgaagagatca 262 ||| |||| ||||| |||||||||||||||| ||| ||||||| ||| |||||| |||| Sbjct: 153 gccatacctgaggctggtgaatcaagaaaggctctactgcaagagtatctgaagaaatca 212 Query: 263 aaggaaaataaagaaaagaatgacaaggagaggcgggacgacgtttacaaaaggaattac 322 |||||||| ||||||| ||| ||||| ||||||| |||||| ||||| ||||||||| Sbjct: 213 aaggaaaacaaagaaaggaacgacaaagagaggctagacgactactacaagaggaattac 272 Query: 323 aaggattattttgg 336 | |||||| ||||| Sbjct: 273 agggattactttgg 286 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 383 gagtcggagaaaggaattctcgcgtggctggacaagaa 420 |||||||||||||||||||||| ||||| |||||||| Sbjct: 333 gagtcggagaaaggaattctcgaatggcttgacaagaa 370 Score = 44.1 bits (22), Expect = 0.79 Identities = 37/42 (88%) Strand = Plus / Plus Query: 65 aaactgatggacacaatcagaaggccggtcgcagcagcttca 106 |||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 6 aaactggtggacacaatcaggaggccattcacagcagcttca 47
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 383 gagtcggagaaaggaattctcgcgtggctggacaagaa 420 |||||||||||||||||||||| ||||| |||||||| Sbjct: 131294 gagtcggagaaaggaattctcgaatggcttgacaagaa 131257 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Minus Query: 49 ggctcagcctccaggtaaactgatggacacaatcagaaggccggtcgcagcagcttca 106 ||||||||| | ||| |||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 132266 ggctcagccccaagggaaactggtggacacaatcaggaggccattcacagcagcttca 132209 Score = 50.1 bits (25), Expect = 0.013 Identities = 34/37 (91%) Strand = Plus / Minus Query: 252 tgaagagatcaaaggaaaataaagaaaagaatgacaa 288 |||||| |||||||||||| ||||||||||| ||||| Sbjct: 131954 tgaagaaatcaaaggaaaacaaagaaaagaacgacaa 131918 Score = 46.1 bits (23), Expect = 0.20 Identities = 83/103 (80%) Strand = Plus / Minus Query: 143 ttggctcagaggaatggagttaacaggaggtgcctcctcactctgctggcatccgtcgca 202 |||||||||||||| || ||| ||||||| |||| |||||| | || | ||| ||| Sbjct: 132163 ttggctcagaggaacggcattagcaggaggggccttctcactttcctcacctccactgca 132104 Query: 203 gccgtacccgaggcgagtgaatcaagaaaggccctattgcaag 245 ||| |||| ||||| |||||||||||||||| ||| |||||| Sbjct: 132103 gccatacctgaggctggtgaatcaagaaaggctctactgcaag 132061
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 49 ggctcagcctccaggtaaactgatggacacaatcagaaggccggtcgcagcagcttca 106 ||||||||| | ||| |||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 29730533 ggctcagccccaagggaaactggtggacacaatcaggaggccattcacagcagcttca 29730590 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 383 gagtcggagaaaggaattctcgcgtggctggacaagaa 420 |||||||||||||||||||||| ||||| |||||||| Sbjct: 29731505 gagtcggagaaaggaattctcgaatggcttgacaagaa 29731542 Score = 50.1 bits (25), Expect = 0.013 Identities = 34/37 (91%) Strand = Plus / Plus Query: 252 tgaagagatcaaaggaaaataaagaaaagaatgacaa 288 |||||| |||||||||||| ||||||||||| ||||| Sbjct: 29730845 tgaagaaatcaaaggaaaacaaagaaaagaacgacaa 29730881 Score = 46.1 bits (23), Expect = 0.20 Identities = 83/103 (80%) Strand = Plus / Plus Query: 143 ttggctcagaggaatggagttaacaggaggtgcctcctcactctgctggcatccgtcgca 202 |||||||||||||| || ||| ||||||| |||| |||||| | || | ||| ||| Sbjct: 29730636 ttggctcagaggaacggcattagcaggaggggccttctcactttcctcacctccactgca 29730695 Query: 203 gccgtacccgaggcgagtgaatcaagaaaggccctattgcaag 245 ||| |||| ||||| |||||||||||||||| ||| |||||| Sbjct: 29730696 gccatacctgaggctggtgaatcaagaaaggctctactgcaag 29730738
>dbj|AK027821.1| Homo sapiens cDNA FLJ14915 fis, clone PLACE1006878, weakly similar to TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 (EC 3.1.27.9) Length = 3917 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 699 caaatttgtactattattttgta 721 ||||||||||||||||||||||| Sbjct: 3198 caaatttgtactattattttgta 3220
>emb|BX469933.14| Zebrafish DNA sequence from clone CH211-207E19 in linkage group 4 Contains seven novel genes and two CpG islands, complete sequence Length = 216458 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 caaaggaaaataaagaaaagaatgaca 287 ||||||||||||||||||| ||||||| Sbjct: 58569 caaaggaaaataaagaaaaaaatgaca 58595
>gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C12 map 3p, complete sequence Length = 185608 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 699 caaatttgtactattattttgta 721 ||||||||||||||||||||||| Sbjct: 9530 caaatttgtactattattttgta 9508
>gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3p, complete sequence Length = 150810 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 699 caaatttgtactattattttgta 721 ||||||||||||||||||||||| Sbjct: 73278 caaatttgtactattattttgta 73300
>gb|AC190198.2| Pan troglodytes BAC clone CH251-600J16 from chromosome 7, complete sequence Length = 190950 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 762 tgtatattttgttttttaatca 783 |||||||||||||||||||||| Sbjct: 49541 tgtatattttgttttttaatca 49562
>gb|AC190404.1| Rhesus macaque BAC clone CH250-31H12 from chromosome unknown, complete sequence Length = 170002 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 aaaggaaaataaagaaaagaat 283 |||||||||||||||||||||| Sbjct: 80978 aaaggaaaataaagaaaagaat 80999
>gb|AY956810.1| Euprymna scolopes interleukin-1-receptor-associated kinase (IRAK4) mRNA, complete cds Length = 1806 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 571 acttgttctgtttcatcatttt 592 |||||||||||||||||||||| Sbjct: 715 acttgttctgtttcatcatttt 694
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 261 caaaggaaaataaagaaaagaa 282 |||||||||||||||||||||| Sbjct: 40473 caaaggaaaataaagaaaagaa 40494
>dbj|D90058.2| Rattus norvegicus gene for peroxisomal 3-ketoacyl-CoA thiolase A, complete cds Length = 8883 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 aagcatctggtcaccttggctc 149 |||||||||||||||||||||| Sbjct: 3045 aagcatctggtcaccttggctc 3024
>emb|AL157771.11| Human DNA sequence from clone RP11-67J18 on chromosome 13 Contains the 5' end of a novel gene (including KIAA0865), possible ortholog of rat myosin heavy chain Myr 8 (Loc192253), complete sequence Length = 115243 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 261 caaaggaaaataaagaaaagaa 282 |||||||||||||||||||||| Sbjct: 88152 caaaggaaaataaagaaaagaa 88131
>emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P3 on chromosome 10 Contains a novel gene, the 5' end of the TCF8 gene for transcription factor 8 (represses interleukin 2 expression) (BZP,ZEB,ZEB1,AREB6,ZFHEP,NIL-2A,ZFHX1A,NIL-2-A), a pseudogene similar to part of serine palmitoyltransferase, long chain base subunit 1 (SPTLC1) (HSAN, HSN1, LBC1, LCB1, SPT1, SPTI) and two CpG islands, complete sequence Length = 187517 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 571 acttgttctgtttcatcattttgata 596 ||||||||||||||||| |||||||| Sbjct: 104179 acttgttctgtttcatctttttgata 104204
>emb|CR377210.7| Zebrafish DNA sequence from clone CH211-195C22 in linkage group 5, complete sequence Length = 170134 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 758 actctgtatattttgtttttta 779 |||||||||||||||||||||| Sbjct: 78991 actctgtatattttgtttttta 79012
>gb|AC098811.3| Papio anubis clone RP41-367L14, complete sequence Length = 182644 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 tgtatattttgttttttaatca 783 |||||||||||||||||||||| Sbjct: 21897 tgtatattttgttttttaatca 21876
>gb|AC191223.2| Gallus gallus BAC clone CH261-26B9 from chromosome z, complete sequence Length = 214682 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 aagattatgtgaagagatcaa 263 ||||||||||||||||||||| Sbjct: 119985 aagattatgtgaagagatcaa 119965
>gb|DQ837165.1| Ecotropis obliqua NPV strain A1, complete genome Length = 131204 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 aaaggaaaataaagaaaagaa 282 ||||||||||||||||||||| Sbjct: 81440 aaaggaaaataaagaaaagaa 81460
>emb|CT027748.10| Zebrafish DNA sequence from clone CH211-51D2 in linkage group 15, complete sequence Length = 166105 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 ggaaaataaagaaaagaatga 285 ||||||||||||||||||||| Sbjct: 6487 ggaaaataaagaaaagaatga 6507
>gb|AC165333.4| Mus musculus chromosome 3, clone wi1-2268G13, complete sequence Length = 39504 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 751 ttctcttactctgtatattttgttt 775 ||||||| ||||||||||||||||| Sbjct: 22263 ttctctttctctgtatattttgttt 22287
>gb|AC121851.4| Mus musculus chromosome 8 clone RP24-92F5, complete sequence Length = 184603 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 ggaaaataaagaaaagaatga 285 ||||||||||||||||||||| Sbjct: 60684 ggaaaataaagaaaagaatga 60704
>gb|AC127596.3| Mus musculus BAC clone RP23-56B4 from chromosome 10, complete sequence Length = 114020 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 638 gtatgtttcatcttttgcaaaatca 662 ||||| ||||||||||||||||||| Sbjct: 36704 gtatggttcatcttttgcaaaatca 36680
>gb|AC124558.4| Mus musculus BAC clone RP23-248O8 from chromosome 10, complete sequence Length = 199938 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 aaaggaaaataaagaaaagaa 282 ||||||||||||||||||||| Sbjct: 159710 aaaggaaaataaagaaaagaa 159730
>gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosome 10, complete sequence Length = 212994 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 aaaggaaaataaagaaaagaa 282 ||||||||||||||||||||| Sbjct: 211456 aaaggaaaataaagaaaagaa 211436
>gb|AC122936.3| Mus musculus BAC clone RP23-20H6 from 5, complete sequence Length = 234064 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 472 tttttctgtaggaaaattccttcca 496 ||||||||| ||||||||||||||| Sbjct: 42938 tttttctgttggaaaattccttcca 42962
>gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, complete sequence Length = 187058 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 aaaggaaaataaagaaaagaa 282 ||||||||||||||||||||| Sbjct: 19990 aaaggaaaataaagaaaagaa 20010
>ref|XM_380517.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00341.1) partial mRNA Length = 2100 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 aggcgggacgacgtttacaaa 313 ||||||||||||||||||||| Sbjct: 1549 aggcgggacgacgtttacaaa 1569
>emb|CR848763.6| Zebrafish DNA sequence from clone CH211-137J23 in linkage group 15, complete sequence Length = 160444 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 ggaaaataaagaaaagaatga 285 ||||||||||||||||||||| Sbjct: 70731 ggaaaataaagaaaagaatga 70751
>emb|AL589725.6| Human DNA sequence from clone RP11-280I21 on chromosome 6, complete sequence Length = 30634 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 aaaggaaaataaagaaaagaa 282 ||||||||||||||||||||| Sbjct: 21290 aaaggaaaataaagaaaagaa 21310
>emb|AL365437.14| Human DNA sequence from clone RP11-343K13 on chromosome 6, complete sequence Length = 39186 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aaactcatctcatcccacggc 51 ||||||||||||||||||||| Sbjct: 37837 aaactcatctcatcccacggc 37817
>emb|AL357515.26| Human DNA sequence from clone RP11-397G5 on chromosome 6 Contains the 3' end of the AMD1 gene for S-adenosylmethionine decarboxylase 1, two novel genes, a glutathione S-transferase M2 (muscle) (GSTM2) pseudogene and three CpG islands, complete sequence Length = 190440 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 764 tatattttgttttttaatcag 784 ||||||||||||||||||||| Sbjct: 146669 tatattttgttttttaatcag 146649
>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel gene, the 5' end of the CHAC gene for chorea acanthocytosis and a CpG island, complete sequence Length = 110633 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 agattatgtgaagagatcaaa 264 ||||||||||||||||||||| Sbjct: 71050 agattatgtgaagagatcaaa 71030
>gb|AC159302.3| Mus musculus BAC clone RP23-238C13 from chromosome 8, complete sequence Length = 183988 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 588 attttgatatctcatttgtgaagta 612 |||||||||||||| |||||||||| Sbjct: 145887 attttgatatctcaattgtgaagta 145911
>ref|XM_647152.1| Entamoeba histolytica HM-1:IMSS protein phosphatase (126.t00023) partial mRNA Length = 1503 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 ggaaaataaagaaaagaatga 285 ||||||||||||||||||||| Sbjct: 1308 ggaaaataaagaaaagaatga 1328
>emb|BX883043.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 2/11 Length = 347664 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 gagatcaaaggaaaataaagaaaag 280 ||||||| ||||||||||||||||| Sbjct: 338087 gagatcagaggaaaataaagaaaag 338111
>gb|AC068706.6| Homo sapiens BAC clone RP11-703O4 from 2, complete sequence Length = 124146 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 aattaagagagcagactggag 27 ||||||||||||||||||||| Sbjct: 48606 aattaagagagcagactggag 48586
>gb|AC084560.1|CBRG36C02 Caenorhabditis briggsae cosmid G36C02, complete sequence Length = 37533 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 aaaagaatgacaaggagaggc 296 ||||||||||||||||||||| Sbjct: 28806 aaaagaatgacaaggagaggc 28826
>gb|AC006380.2|AC006380 Homo sapiens BAC clone RP11-463M14 from 7q15.1-p13, complete sequence Length = 120429 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 762 tgtatattttgttttttaatc 782 ||||||||||||||||||||| Sbjct: 1100 tgtatattttgttttttaatc 1080
>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20 Length = 91193 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 aaaggaaaataaagaaaagaa 282 ||||||||||||||||||||| Sbjct: 28917 aaaggaaaataaagaaaagaa 28937
>dbj|AB000094.1| Arabidopsis thaliana gene for inorganic phosphate transporter, protein phosphatase 1 catalytic subunit, complete cds Length = 15532 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 aaaggaaaataaagaaaagaa 282 ||||||||||||||||||||| Sbjct: 6851 aaaggaaaataaagaaaagaa 6871
>emb|BX571666.10| Zebrafish DNA sequence from clone DKEY-221F8 in linkage group 5, complete sequence Length = 115940 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 758 actctgtatattttgtttttt 778 ||||||||||||||||||||| Sbjct: 8144 actctgtatattttgtttttt 8164
>gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete sequence Length = 229073 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 588 attttgatatctcatttgtgaagta 612 |||||||||||||| |||||||||| Sbjct: 221062 attttgatatctcaattgtgaagta 221038
>gb|AC138156.3| Carollia perspicillata clone 41M6, complete sequence Length = 123894 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 aaggaaaataaagaaaagaat 283 ||||||||||||||||||||| Sbjct: 18194 aaggaaaataaagaaaagaat 18174
>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence Length = 209938 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 aaaggaaaataaagaaaagaa 282 ||||||||||||||||||||| Sbjct: 180988 aaaggaaaataaagaaaagaa 181008
>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete sequence Length = 215366 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 tggaagggccggtcagagaga 362 ||||||||||||||||||||| Sbjct: 151402 tggaagggccggtcagagaga 151382
>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence Length = 262831 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 472 tttttctgtaggaaaattccttcca 496 ||||||||| ||||||||||||||| Sbjct: 79794 tttttctgttggaaaattccttcca 79770 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 182,968,334 Number of extensions: 11496893 Number of successful extensions: 249750 Number of sequences better than 10.0: 47 Number of HSP's gapped: 249750 Number of HSP's successfully gapped: 57 Length of query: 826 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 804 Effective length of database: 18,508,616,841 Effective search space: 14880927940164 Effective search space used: 14880927940164 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)