ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf23h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001057699.1| Oryza sativa (japonica cultivar-group) Os03g... 115 3e-22
2dbj|AK070777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 6e-20
3gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 geno... 52 0.003
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
5dbj|AK027821.1| Homo sapiens cDNA FLJ14915 fis, clone PLACE10068... 46 0.20
6emb|BX469933.14| Zebrafish DNA sequence from clone CH211-207E19 ... 46 0.20
7gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C... 46 0.20
8gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3... 46 0.20
9gb|AC190198.2| Pan troglodytes BAC clone CH251-600J16 from chrom... 44 0.79
10gb|AC190404.1| Rhesus macaque BAC clone CH250-31H12 from chromos... 44 0.79
11gb|AY956810.1| Euprymna scolopes interleukin-1-receptor-associat... 44 0.79
12gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5... 44 0.79
13dbj|D90058.2| Rattus norvegicus gene for peroxisomal 3-ketoacyl-... 44 0.79
14emb|AL157771.11| Human DNA sequence from clone RP11-67J18 on chr... 44 0.79
15emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P... 44 0.79
16emb|CR377210.7| Zebrafish DNA sequence from clone CH211-195C22 i... 44 0.79
17gb|AC098811.3| Papio anubis clone RP41-367L14, complete sequence 44 0.79
18gb|AC191223.2| Gallus gallus BAC clone CH261-26B9 from chromosom... 42 3.1
19gb|DQ837165.1| Ecotropis obliqua NPV strain A1, complete genome 42 3.1
20emb|CT027748.10| Zebrafish DNA sequence from clone CH211-51D2 in... 42 3.1
21gb|AC165333.4| Mus musculus chromosome 3, clone wi1-2268G13, com... 42 3.1
22gb|AC121851.4| Mus musculus chromosome 8 clone RP24-92F5, comple... 42 3.1
23gb|AC127596.3| Mus musculus BAC clone RP23-56B4 from chromosome ... 42 3.1
24gb|AC124558.4| Mus musculus BAC clone RP23-248O8 from chromosome... 42 3.1
25gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosom... 42 3.1
26gb|AC122936.3| Mus musculus BAC clone RP23-20H6 from 5, complete... 42 3.1
27gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, com... 42 3.1
28ref|XM_380517.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 42 3.1
29emb|CR848763.6| Zebrafish DNA sequence from clone CH211-137J23 i... 42 3.1
30emb|AL589725.6| Human DNA sequence from clone RP11-280I21 on chr... 42 3.1
31emb|AL365437.14| Human DNA sequence from clone RP11-343K13 on ch... 42 3.1
32emb|AL357515.26| Human DNA sequence from clone RP11-397G5 on chr... 42 3.1
33emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chro... 42 3.1
34gb|AC159302.3| Mus musculus BAC clone RP23-238C13 from chromosom... 42 3.1
35ref|XM_647152.1| Entamoeba histolytica HM-1:IMSS protein phospha... 42 3.1
36emb|BX883043.1| Rattus norvegicus chromosome 20, major histocomp... 42 3.1
37gb|AC068706.6| Homo sapiens BAC clone RP11-703O4 from 2, complet... 42 3.1
38gb|AC084560.1|CBRG36C02 Caenorhabditis briggsae cosmid G36C02, c... 42 3.1
39gb|AC006380.2|AC006380 Homo sapiens BAC clone RP11-463M14 from 7... 42 3.1
40dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 3.1
41dbj|AB000094.1| Arabidopsis thaliana gene for inorganic phosphat... 42 3.1
42emb|BX571666.10| Zebrafish DNA sequence from clone DKEY-221F8 in... 42 3.1
43gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete... 42 3.1
44gb|AC138156.3| Carollia perspicillata clone 41M6, complete sequence 42 3.1
45gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, com... 42 3.1
46emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chr... 42 3.1
47gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, comp... 42 3.1

>ref|NM_001057699.1| Oryza sativa (japonica cultivar-group) Os03g0731100 (Os03g0731100)
           mRNA, partial cds
          Length = 578
 Score =  115 bits (58), Expect = 3e-22
 Identities = 160/194 (82%)
 Strand = Plus / Plus

                                                                       
Query: 143 ttggctcagaggaatggagttaacaggaggtgcctcctcactctgctggcatccgtcgca 202
           |||||||||||||| ||  ||| ||||||| |||| |||||| | ||  | |||   |||
Sbjct: 92  ttggctcagaggaacggcattagcaggaggggccttctcactttcctcacctccactgca 151

                                                                       
Query: 203 gccgtacccgaggcgagtgaatcaagaaaggccctattgcaagattatgtgaagagatca 262
           ||| |||| |||||  |||||||||||||||| ||| ||||||| ||| |||||| ||||
Sbjct: 152 gccatacctgaggctggtgaatcaagaaaggctctactgcaagagtatctgaagaaatca 211

                                                                       
Query: 263 aaggaaaataaagaaaagaatgacaaggagaggcgggacgacgtttacaaaaggaattac 322
           |||||||| ||||||||||| ||||| |||||||  ||||||   ||||| |||||||||
Sbjct: 212 aaggaaaacaaagaaaagaacgacaaagagaggctagacgactactacaagaggaattac 271

                         
Query: 323 aaggattattttgg 336
           | |||||| |||||
Sbjct: 272 agggattactttgg 285



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 383 gagtcggagaaaggaattctcgcgtggctggacaagaa 420
           ||||||||||||||||||||||  ||||| ||||||||
Sbjct: 332 gagtcggagaaaggaattctcgaatggcttgacaagaa 369



 Score = 44.1 bits (22), Expect = 0.79
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 65  aaactgatggacacaatcagaaggccggtcgcagcagcttca 106
           |||||| ||||||||||||| |||||  || |||||||||||
Sbjct: 5   aaactggtggacacaatcaggaggccattcacagcagcttca 46



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>dbj|AK070777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070C11, full
           insert sequence
          Length = 579

 Score =  107 bits (54), Expect = 6e-20
 Identities = 159/194 (81%)
 Strand = Plus / Plus

                                                                       
Query: 143 ttggctcagaggaatggagttaacaggaggtgcctcctcactctgctggcatccgtcgca 202
           |||||||||||||| ||  ||| ||||||| |||| |||||| | ||  | |||   |||
Sbjct: 93  ttggctcagaggaacggcattagcaggaggggccttctcactttcctcacctccactgca 152

                                                                       
Query: 203 gccgtacccgaggcgagtgaatcaagaaaggccctattgcaagattatgtgaagagatca 262
           ||| |||| |||||  |||||||||||||||| ||| ||||||| ||| |||||| ||||
Sbjct: 153 gccatacctgaggctggtgaatcaagaaaggctctactgcaagagtatctgaagaaatca 212

                                                                       
Query: 263 aaggaaaataaagaaaagaatgacaaggagaggcgggacgacgtttacaaaaggaattac 322
           |||||||| ||||||| ||| ||||| |||||||  ||||||   ||||| |||||||||
Sbjct: 213 aaggaaaacaaagaaaggaacgacaaagagaggctagacgactactacaagaggaattac 272

                         
Query: 323 aaggattattttgg 336
           | |||||| |||||
Sbjct: 273 agggattactttgg 286



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 383 gagtcggagaaaggaattctcgcgtggctggacaagaa 420
           ||||||||||||||||||||||  ||||| ||||||||
Sbjct: 333 gagtcggagaaaggaattctcgaatggcttgacaagaa 370



 Score = 44.1 bits (22), Expect = 0.79
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 65  aaactgatggacacaatcagaaggccggtcgcagcagcttca 106
           |||||| ||||||||||||| |||||  || |||||||||||
Sbjct: 6   aaactggtggacacaatcaggaggccattcacagcagcttca 47



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>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete
              sequence
          Length = 163712

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 383    gagtcggagaaaggaattctcgcgtggctggacaagaa 420
              ||||||||||||||||||||||  ||||| ||||||||
Sbjct: 131294 gagtcggagaaaggaattctcgaatggcttgacaagaa 131257



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                        
Query: 49     ggctcagcctccaggtaaactgatggacacaatcagaaggccggtcgcagcagcttca 106
              ||||||||| | ||| |||||| ||||||||||||| |||||  || |||||||||||
Sbjct: 132266 ggctcagccccaagggaaactggtggacacaatcaggaggccattcacagcagcttca 132209



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 252    tgaagagatcaaaggaaaataaagaaaagaatgacaa 288
              |||||| |||||||||||| ||||||||||| |||||
Sbjct: 131954 tgaagaaatcaaaggaaaacaaagaaaagaacgacaa 131918



 Score = 46.1 bits (23), Expect = 0.20
 Identities = 83/103 (80%)
 Strand = Plus / Minus

                                                                          
Query: 143    ttggctcagaggaatggagttaacaggaggtgcctcctcactctgctggcatccgtcgca 202
              |||||||||||||| ||  ||| ||||||| |||| |||||| | ||  | |||   |||
Sbjct: 132163 ttggctcagaggaacggcattagcaggaggggccttctcactttcctcacctccactgca 132104

                                                         
Query: 203    gccgtacccgaggcgagtgaatcaagaaaggccctattgcaag 245
              ||| |||| |||||  |||||||||||||||| ||| ||||||
Sbjct: 132103 gccatacctgaggctggtgaatcaagaaaggctctactgcaag 132061



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 49       ggctcagcctccaggtaaactgatggacacaatcagaaggccggtcgcagcagcttca 106
                ||||||||| | ||| |||||| ||||||||||||| |||||  || |||||||||||
Sbjct: 29730533 ggctcagccccaagggaaactggtggacacaatcaggaggccattcacagcagcttca 29730590



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 383      gagtcggagaaaggaattctcgcgtggctggacaagaa 420
                ||||||||||||||||||||||  ||||| ||||||||
Sbjct: 29731505 gagtcggagaaaggaattctcgaatggcttgacaagaa 29731542



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 252      tgaagagatcaaaggaaaataaagaaaagaatgacaa 288
                |||||| |||||||||||| ||||||||||| |||||
Sbjct: 29730845 tgaagaaatcaaaggaaaacaaagaaaagaacgacaa 29730881



 Score = 46.1 bits (23), Expect = 0.20
 Identities = 83/103 (80%)
 Strand = Plus / Plus

                                                                            
Query: 143      ttggctcagaggaatggagttaacaggaggtgcctcctcactctgctggcatccgtcgca 202
                |||||||||||||| ||  ||| ||||||| |||| |||||| | ||  | |||   |||
Sbjct: 29730636 ttggctcagaggaacggcattagcaggaggggccttctcactttcctcacctccactgca 29730695

                                                           
Query: 203      gccgtacccgaggcgagtgaatcaagaaaggccctattgcaag 245
                ||| |||| |||||  |||||||||||||||| ||| ||||||
Sbjct: 29730696 gccatacctgaggctggtgaatcaagaaaggctctactgcaag 29730738



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>dbj|AK027821.1| Homo sapiens cDNA FLJ14915 fis, clone PLACE1006878, weakly similar to
            TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 (EC 3.1.27.9)
          Length = 3917

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 699  caaatttgtactattattttgta 721
            |||||||||||||||||||||||
Sbjct: 3198 caaatttgtactattattttgta 3220



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>emb|BX469933.14| Zebrafish DNA sequence from clone CH211-207E19 in linkage group 4
             Contains seven novel genes and two CpG islands, complete
             sequence
          Length = 216458

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 261   caaaggaaaataaagaaaagaatgaca 287
             ||||||||||||||||||| |||||||
Sbjct: 58569 caaaggaaaataaagaaaaaaatgaca 58595



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>gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C12 map 3p, complete sequence
          Length = 185608

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 699  caaatttgtactattattttgta 721
            |||||||||||||||||||||||
Sbjct: 9530 caaatttgtactattattttgta 9508



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>gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3p, complete sequence
          Length = 150810

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 699   caaatttgtactattattttgta 721
             |||||||||||||||||||||||
Sbjct: 73278 caaatttgtactattattttgta 73300



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>gb|AC190198.2| Pan troglodytes BAC clone CH251-600J16 from chromosome 7, complete
             sequence
          Length = 190950

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 762   tgtatattttgttttttaatca 783
             ||||||||||||||||||||||
Sbjct: 49541 tgtatattttgttttttaatca 49562



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>gb|AC190404.1| Rhesus macaque BAC clone CH250-31H12 from chromosome unknown, complete
             sequence
          Length = 170002

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 262   aaaggaaaataaagaaaagaat 283
             ||||||||||||||||||||||
Sbjct: 80978 aaaggaaaataaagaaaagaat 80999



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>gb|AY956810.1| Euprymna scolopes interleukin-1-receptor-associated kinase (IRAK4)
           mRNA, complete cds
          Length = 1806

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 571 acttgttctgtttcatcatttt 592
           ||||||||||||||||||||||
Sbjct: 715 acttgttctgtttcatcatttt 694



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>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete
             sequence
          Length = 249995

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 261   caaaggaaaataaagaaaagaa 282
             ||||||||||||||||||||||
Sbjct: 40473 caaaggaaaataaagaaaagaa 40494



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>dbj|D90058.2| Rattus norvegicus gene for peroxisomal 3-ketoacyl-CoA thiolase A,
            complete cds
          Length = 8883

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 128  aagcatctggtcaccttggctc 149
            ||||||||||||||||||||||
Sbjct: 3045 aagcatctggtcaccttggctc 3024



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>emb|AL157771.11| Human DNA sequence from clone RP11-67J18 on chromosome 13 Contains the
             5' end of a novel gene (including KIAA0865), possible
             ortholog of rat myosin heavy chain Myr 8 (Loc192253),
             complete sequence
          Length = 115243

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 261   caaaggaaaataaagaaaagaa 282
             ||||||||||||||||||||||
Sbjct: 88152 caaaggaaaataaagaaaagaa 88131



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>emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P3 on chromosome 10 Contains a
              novel gene, the 5' end of the TCF8 gene for transcription
              factor 8 (represses interleukin 2 expression)
              (BZP,ZEB,ZEB1,AREB6,ZFHEP,NIL-2A,ZFHX1A,NIL-2-A), a
              pseudogene similar to part of serine palmitoyltransferase,
              long chain base subunit 1 (SPTLC1) (HSAN, HSN1, LBC1, LCB1,
              SPT1, SPTI) and two CpG islands, complete sequence
          Length = 187517

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 571    acttgttctgtttcatcattttgata 596
              ||||||||||||||||| ||||||||
Sbjct: 104179 acttgttctgtttcatctttttgata 104204



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>emb|CR377210.7| Zebrafish DNA sequence from clone CH211-195C22 in linkage group 5,
             complete sequence
          Length = 170134

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 758   actctgtatattttgtttttta 779
             ||||||||||||||||||||||
Sbjct: 78991 actctgtatattttgtttttta 79012



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>gb|AC098811.3| Papio anubis clone RP41-367L14, complete sequence
          Length = 182644

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 762   tgtatattttgttttttaatca 783
             ||||||||||||||||||||||
Sbjct: 21897 tgtatattttgttttttaatca 21876



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>gb|AC191223.2| Gallus gallus BAC clone CH261-26B9 from chromosome z, complete sequence
          Length = 214682

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 243    aagattatgtgaagagatcaa 263
              |||||||||||||||||||||
Sbjct: 119985 aagattatgtgaagagatcaa 119965



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>gb|DQ837165.1| Ecotropis obliqua NPV strain A1, complete genome
          Length = 131204

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 262   aaaggaaaataaagaaaagaa 282
             |||||||||||||||||||||
Sbjct: 81440 aaaggaaaataaagaaaagaa 81460



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>emb|CT027748.10| Zebrafish DNA sequence from clone CH211-51D2 in linkage group 15,
            complete sequence
          Length = 166105

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 265  ggaaaataaagaaaagaatga 285
            |||||||||||||||||||||
Sbjct: 6487 ggaaaataaagaaaagaatga 6507



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>gb|AC165333.4| Mus musculus chromosome 3, clone wi1-2268G13, complete sequence
          Length = 39504

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 751   ttctcttactctgtatattttgttt 775
             ||||||| |||||||||||||||||
Sbjct: 22263 ttctctttctctgtatattttgttt 22287



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>gb|AC121851.4| Mus musculus chromosome 8 clone RP24-92F5, complete sequence
          Length = 184603

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 265   ggaaaataaagaaaagaatga 285
             |||||||||||||||||||||
Sbjct: 60684 ggaaaataaagaaaagaatga 60704



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>gb|AC127596.3| Mus musculus BAC clone RP23-56B4 from chromosome 10, complete sequence
          Length = 114020

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 638   gtatgtttcatcttttgcaaaatca 662
             ||||| |||||||||||||||||||
Sbjct: 36704 gtatggttcatcttttgcaaaatca 36680



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>gb|AC124558.4| Mus musculus BAC clone RP23-248O8 from chromosome 10, complete sequence
          Length = 199938

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 262    aaaggaaaataaagaaaagaa 282
              |||||||||||||||||||||
Sbjct: 159710 aaaggaaaataaagaaaagaa 159730



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>gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosome 10, complete sequence
          Length = 212994

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 262    aaaggaaaataaagaaaagaa 282
              |||||||||||||||||||||
Sbjct: 211456 aaaggaaaataaagaaaagaa 211436



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>gb|AC122936.3| Mus musculus BAC clone RP23-20H6 from 5, complete sequence
          Length = 234064

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 472   tttttctgtaggaaaattccttcca 496
             ||||||||| |||||||||||||||
Sbjct: 42938 tttttctgttggaaaattccttcca 42962



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>gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, complete sequence
          Length = 187058

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 262   aaaggaaaataaagaaaagaa 282
             |||||||||||||||||||||
Sbjct: 19990 aaaggaaaataaagaaaagaa 20010



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>ref|XM_380517.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00341.1)
            partial mRNA
          Length = 2100

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 293  aggcgggacgacgtttacaaa 313
            |||||||||||||||||||||
Sbjct: 1549 aggcgggacgacgtttacaaa 1569



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>emb|CR848763.6| Zebrafish DNA sequence from clone CH211-137J23 in linkage group 15,
             complete sequence
          Length = 160444

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 265   ggaaaataaagaaaagaatga 285
             |||||||||||||||||||||
Sbjct: 70731 ggaaaataaagaaaagaatga 70751



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>emb|AL589725.6| Human DNA sequence from clone RP11-280I21 on chromosome 6, complete
             sequence
          Length = 30634

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 262   aaaggaaaataaagaaaagaa 282
             |||||||||||||||||||||
Sbjct: 21290 aaaggaaaataaagaaaagaa 21310



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>emb|AL365437.14| Human DNA sequence from clone RP11-343K13 on chromosome 6, complete
             sequence
          Length = 39186

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    aaactcatctcatcccacggc 51
             |||||||||||||||||||||
Sbjct: 37837 aaactcatctcatcccacggc 37817



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>emb|AL357515.26| Human DNA sequence from clone RP11-397G5 on chromosome 6 Contains the 3'
              end of the AMD1 gene for S-adenosylmethionine decarboxylase
              1, two novel genes, a glutathione S-transferase M2 (muscle)
              (GSTM2) pseudogene and three CpG islands, complete sequence
          Length = 190440

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 764    tatattttgttttttaatcag 784
              |||||||||||||||||||||
Sbjct: 146669 tatattttgttttttaatcag 146649



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>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a
             novel gene, the 5' end of the CHAC gene for chorea
             acanthocytosis and a CpG island, complete sequence
          Length = 110633

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 244   agattatgtgaagagatcaaa 264
             |||||||||||||||||||||
Sbjct: 71050 agattatgtgaagagatcaaa 71030



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>gb|AC159302.3| Mus musculus BAC clone RP23-238C13 from chromosome 8, complete sequence
          Length = 183988

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 588    attttgatatctcatttgtgaagta 612
              |||||||||||||| ||||||||||
Sbjct: 145887 attttgatatctcaattgtgaagta 145911



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>ref|XM_647152.1| Entamoeba histolytica HM-1:IMSS protein phosphatase (126.t00023)
            partial mRNA
          Length = 1503

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 265  ggaaaataaagaaaagaatga 285
            |||||||||||||||||||||
Sbjct: 1308 ggaaaataaagaaaagaatga 1328



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>emb|BX883043.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 2/11
          Length = 347664

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 256    gagatcaaaggaaaataaagaaaag 280
              ||||||| |||||||||||||||||
Sbjct: 338087 gagatcagaggaaaataaagaaaag 338111



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>gb|AC068706.6| Homo sapiens BAC clone RP11-703O4 from 2, complete sequence
          Length = 124146

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     aattaagagagcagactggag 27
             |||||||||||||||||||||
Sbjct: 48606 aattaagagagcagactggag 48586



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>gb|AC084560.1|CBRG36C02 Caenorhabditis briggsae cosmid G36C02, complete sequence
          Length = 37533

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 276   aaaagaatgacaaggagaggc 296
             |||||||||||||||||||||
Sbjct: 28806 aaaagaatgacaaggagaggc 28826



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>gb|AC006380.2|AC006380 Homo sapiens BAC clone RP11-463M14 from 7q15.1-p13, complete sequence
          Length = 120429

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 762  tgtatattttgttttttaatc 782
            |||||||||||||||||||||
Sbjct: 1100 tgtatattttgttttttaatc 1080



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>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20
          Length = 91193

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 262   aaaggaaaataaagaaaagaa 282
             |||||||||||||||||||||
Sbjct: 28917 aaaggaaaataaagaaaagaa 28937



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>dbj|AB000094.1| Arabidopsis thaliana gene for inorganic phosphate transporter,
            protein phosphatase 1 catalytic subunit, complete cds
          Length = 15532

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 262  aaaggaaaataaagaaaagaa 282
            |||||||||||||||||||||
Sbjct: 6851 aaaggaaaataaagaaaagaa 6871



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>emb|BX571666.10| Zebrafish DNA sequence from clone DKEY-221F8 in linkage group 5,
            complete sequence
          Length = 115940

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 758  actctgtatattttgtttttt 778
            |||||||||||||||||||||
Sbjct: 8144 actctgtatattttgtttttt 8164



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>gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete sequence
          Length = 229073

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 588    attttgatatctcatttgtgaagta 612
              |||||||||||||| ||||||||||
Sbjct: 221062 attttgatatctcaattgtgaagta 221038



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>gb|AC138156.3| Carollia perspicillata clone 41M6, complete sequence
          Length = 123894

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 263   aaggaaaataaagaaaagaat 283
             |||||||||||||||||||||
Sbjct: 18194 aaggaaaataaagaaaagaat 18174



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>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence
          Length = 209938

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 262    aaaggaaaataaagaaaagaa 282
              |||||||||||||||||||||
Sbjct: 180988 aaaggaaaataaagaaaagaa 181008



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>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete
              sequence
          Length = 215366

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 342    tggaagggccggtcagagaga 362
              |||||||||||||||||||||
Sbjct: 151402 tggaagggccggtcagagaga 151382



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>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence
          Length = 262831

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 472   tttttctgtaggaaaattccttcca 496
             ||||||||| |||||||||||||||
Sbjct: 79794 tttttctgttggaaaattccttcca 79770


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 182,968,334
Number of extensions: 11496893
Number of successful extensions: 249750
Number of sequences better than 10.0: 47
Number of HSP's gapped: 249750
Number of HSP's successfully gapped: 57
Length of query: 826
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 804
Effective length of database: 18,508,616,841
Effective search space: 14880927940164
Effective search space used: 14880927940164
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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