ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf19k16 |
|---|---|
| Clone Library Name | barley_pub |
>AK103128:Os07g0605400 | Length = 113 Score = 52.8 bits (125), Expect = 3e-07 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 3/104 (2%) Frame = +3 Query: 285 MSTGDIVTGLGYVKNHTGAAMASTISLA-KPYLPAKLS-TRDGAVGTAAMVIGGA-VGAY 455 + + V GL AA+AST++ A KP L A + ++ VG +A+ +GGA V AY Sbjct: 2 VGVSEFVGGLLNSAKSAVAAVASTVAAAAKPGLAAGVGFVKEQGVGKSALAVGGAAVAAY 61 Query: 456 FLWXXXXXXXXXXXXXXXXXXXXFLISRTAFVANPQVYYQILRT 587 FLW ++ISR AF+ANP++Y+ +LRT Sbjct: 62 FLWPTAAVGGAIMNAPGAAG---YVISRAAFLANPKLYFHLLRT 102
>AK068670:Os07g0605400 | Length = 113 Score = 52.8 bits (125), Expect = 3e-07 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 3/104 (2%) Frame = +3 Query: 285 MSTGDIVTGLGYVKNHTGAAMASTISLA-KPYLPAKLS-TRDGAVGTAAMVIGGA-VGAY 455 + + V GL AA+AST++ A KP L A + ++ VG +A+ +GGA V AY Sbjct: 2 VGVSEFVGGLLNSAKSAVAAVASTVAAAAKPGLAAGVGFVKEQGVGKSALAVGGAAVAAY 61 Query: 456 FLWXXXXXXXXXXXXXXXXXXXXFLISRTAFVANPQVYYQILRT 587 FLW ++ISR AF+ANP++Y+ +LRT Sbjct: 62 FLWPTAAVGGAIMNAPGAAG---YVISRAAFLANPKLYFHLLRT 102
>Os06g0117000:Os06g0117000 | Length = 606 Score = 26.2 bits (56), Expect(2) = 0.51 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 538 ARRLWPTRRSTTRSSAPLGPRRPPPHSCR 624 ARRLWP+ ++ R++A PPHS R Sbjct: 59 ARRLWPSSGASPRAAA-------PPHSHR 80 Score = 24.6 bits (52), Expect(2) = 0.51 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 8/45 (17%) Frame = +3 Query: 714 GDSFHLVPYTPRRGSERRWGDNK--------RCLLLLFSNVLVIV 824 G +L+P+ PRR ER G + R L ++ S V+V+V Sbjct: 114 GQGLYLLPFDPRRREERGEGRRRHRHLWAGHRLLSVVRSAVVVVV 158
>AK066949:Os06g0673700 | Length = 124 Score = 31.6 bits (70), Expect = 0.79 Identities = 29/97 (29%), Positives = 34/97 (35%) Frame = +1 Query: 373 RTCLQSSPRATVPWGPRRWSSGAPWAPTFSGLXXXXXXXXXXXXXXXXXXXS*FPARRLW 552 R C S A P PR SS AP P G P RR Sbjct: 24 RGCPSRSTTAPPPRPPRSPSSPAPRRPPPPGS----------------------PRRRTP 61 Query: 553 PTRRSTTRSSAPLGPRRPPPHSCREASKQARPFDPSR 663 + R+ T S+AP PRR R+A + P P R Sbjct: 62 TSGRTCTPSAAPCPPRRRAARRTRQARPRTTPTPPPR 98
>AK071253:Os10g0467200 | Length = 394 Score = 31.2 bits (69), Expect = 1.0 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +1 Query: 550 WPTRRSTTRSSAPLGPRRPPPHSCREASKQARPFDPSRLLCFVYCVK 690 W + + R SAP PPP + +K P P R LC + C K Sbjct: 300 WWYQSAEERMSAPTVYPPPPPPPLPKVAKDGLPLPPDRTLCPLCCQK 346
>AK071065:Os04g0469500 | Length = 487 Score = 30.4 bits (67), Expect = 1.7 Identities = 17/40 (42%), Positives = 18/40 (45%) Frame = +1 Query: 541 RRLWPTRRSTTRSSAPLGPRRPPPHSCREASKQARPFDPS 660 RR PTR T + P RRPP S R S A P S Sbjct: 53 RRRRPTRSPTRSPATPTSTRRPPSTSPRVTSPSATPSSTS 92
>Os03g0377100:Os03g0377100 | Length = 264 Score = 30.0 bits (66), Expect = 2.3 Identities = 21/73 (28%), Positives = 29/73 (39%) Frame = -2 Query: 434 DDHRRGPHGTVARGELCRQVRFGQRDGGGHGRSCMVLDVAETGDDVACAHLG*LCGKVRL 255 D H G A G + +G G G+G L GD ++C C ++R Sbjct: 32 DAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCG----ACFELRC 87 Query: 254 GQRDGGGHGRSCM 216 G GGG R C+ Sbjct: 88 G-GGGGGDRRGCL 99
>Os01g0786700:Os01g0786700 | Length = 397 Score = 30.0 bits (66), Expect = 2.3 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -2 Query: 284 LG*LCGKVRLGQRDGGGHGRSCMVLDVAET 195 LG G+ LGQ+DG GH R C+ L V T Sbjct: 151 LGDGAGEALLGQKDGDGHRRQCVDLMVLVT 180 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -2 Query: 425 RRGPHGTVARGELCRQVRFGQRDGGGHGRSCMVLDVAET 309 RR G + G+ + GQ+DG GH R C+ L V T Sbjct: 142 RRMLEGGSSLGDGAGEALLGQKDGDGHRRQCVDLMVLVT 180
>AK111771:Os07g0225000 | Length = 194 Score = 30.0 bits (66), Expect = 2.3 Identities = 32/106 (30%), Positives = 39/106 (36%), Gaps = 4/106 (3%) Frame = -2 Query: 647 GRACLLASLHECGGGRRGPSGAEDLVVDLRVGHKRRAGNQEAGGTRRLHHXXXXXXXGCS 468 G ++A E GGG+RG G RR G E G + Sbjct: 103 GEERVVAGEEEHGGGQRGGEGG-----------GRRGGEGEVGDVELV-----------G 140 Query: 467 RPEKVGAHGAPDDHRRGPHGTVARGELCRQVRFGQRDG----GGHG 342 E GA GAP RG G +A G VR + +G GGHG Sbjct: 141 GGELGGAEGAPVGGLRGEAGGLAAGGEEGGVRRRREEGLGGVGGHG 186
>Os12g0259800:Os12g0259800 | Length = 577 Score = 24.3 bits (51), Expect(2) = 3.0 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 559 RRSTTRSSAPLGPRRPPPHSCREASK 636 RR T R P+ PRRPP + A + Sbjct: 314 RRKTVRWRPPVLPRRPPVNDTATAHR 339 Score = 23.9 bits (50), Expect(2) = 3.0 Identities = 13/47 (27%), Positives = 18/47 (38%) Frame = +3 Query: 321 VKNHTGAAMASTISLAKPYLPAKLSTRDGAVGTAAMVIGGAVGAYFL 461 V H + + KPY + G A MV AVG Y++ Sbjct: 238 VAKHRLTVVGADACYTKPYKTDVVVVSPGQTVDALMVASAAVGRYYM 284
>AK109628:Os04g0389800 | Length = 639 Score = 29.6 bits (65), Expect = 3.0 Identities = 27/89 (30%), Positives = 30/89 (33%) Frame = -2 Query: 608 GGRRGPSGAEDLVVDLRVGHKRRAGNQEAGGTRRLHHXXXXXXXGCSRPEKVGAHGAPDD 429 G RRGP+G D GH G G R + G G DD Sbjct: 524 GPRRGPAGEGDGAEQPAPGH----GGAVGGQVLRRQQGAHLPRQPGGERRRRGVPGLRDD 579 Query: 428 HRRGPHGTVARGELCRQVRFGQRDGGGHG 342 RR H R E R R + D GG G Sbjct: 580 RRRLRHPGGPRDEEGRGPRRRRGDDGGAG 608
>AK107291:Os07g0564100 | Length = 481 Score = 29.6 bits (65), Expect = 3.0 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 Query: 647 PSTRPVCFVSCTVLN*VWFDY 709 PS PVC VS TV N WF+Y Sbjct: 178 PSYMPVCLVSKTVKNYDWFEY 198
>AJ535211:Os02g0133300 | Length = 1154 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -2 Query: 431 DHRRGPHGTVARGELCRQVRFGQRDGGGHGRSCMVLDVAETGDDVA 294 DHRR R +CR + + G+G C+ LD GD VA Sbjct: 558 DHRRAFEQVFGRTVICRDLETATKVARGNGLDCITLD----GDQVA 599
>Os04g0326200:Os04g0326200 | Length = 524 Score = 29.3 bits (64), Expect = 3.9 Identities = 26/98 (26%), Positives = 36/98 (36%) Frame = -2 Query: 635 LLASLHECGGGRRGPSGAEDLVVDLRVGHKRRAGNQEAGGTRRLHHXXXXXXXGCSRPEK 456 ++A HE G RR GA RV +R G + RR R + Sbjct: 349 VVAVPHEAAGARRAQRGARHADPPRRVVRERHDGVRHDARDRR---------HTGGRVIE 399 Query: 455 VGAHGAPDDHRRGPHGTVARGELCRQVRFGQRDGGGHG 342 +G G G G RG++ V G+R+ G G Sbjct: 400 LGEEGDDVGEAGGHGGAAERGDVLGGVGVGRREAVGDG 437
>Os01g0341000:Os01g0341000 | Length = 571 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +3 Query: 423 AMVIGGAVGAYFLWXXXXXXXXXXXXXXXXXXXXFLISRTAFVANPQVYYQILRT 587 A+V + GA++L+ +ISR AF + P++Y+QILR+ Sbjct: 486 ALVSAVSSGAHYLFVPFGQCCVPLTMMRAPGAAGLMISRAAFESLPELYFQILRS 540
>AK100433:Os07g0693100 | Length = 587 Score = 29.3 bits (64), Expect = 3.9 Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 2/68 (2%) Frame = +3 Query: 225 AAMASTVSLAKPYLPA--KLTEMSTGDIVTGLGYVKNHTGAAMASTISLAKPYLPAKLST 398 A +A KP L A KL G L H AAM S L LP + T Sbjct: 224 ATLAFLDKAVKPVLVAGPKLRVAKAGGAFVDLADASGHAVAAMPSAKGLVPETLPRFIGT 283 Query: 399 RDGAVGTA 422 GAV TA Sbjct: 284 YWGAVSTA 291
>AB111050:Os07g0693100 | Length = 587 Score = 29.3 bits (64), Expect = 3.9 Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 2/68 (2%) Frame = +3 Query: 225 AAMASTVSLAKPYLPA--KLTEMSTGDIVTGLGYVKNHTGAAMASTISLAKPYLPAKLST 398 A +A KP L A KL G L H AAM S L LP + T Sbjct: 224 ATLAFLDKAVKPVLVAGPKLRVAKAGGAFVDLADASGHAVAAMPSAKGLVPETLPRFIGT 283 Query: 399 RDGAVGTA 422 GAV TA Sbjct: 284 YWGAVSTA 291
>X56063:Os06g0726200 | Length = 199 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 556 TRRSTTRSSAPLGPRRPPPHSCREASKQARP 648 TRR+ R+S P P PPP R + + A P Sbjct: 81 TRRARPRTSTPTTPSSPPPTPSRASPQPATP 111
>AY378172:Os06g0726200 | Length = 195 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 556 TRRSTTRSSAPLGPRRPPPHSCREASKQARP 648 TRR+ R+S P P PPP R + + A P Sbjct: 77 TRRARPRTSTPTTPSSPPPTPSRASPQPATP 107
>Z29961:Os06g0726200 | Length = 214 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 556 TRRSTTRSSAPLGPRRPPPHSCREASKQARP 648 TRR+ R+S P P PPP R + + A P Sbjct: 96 TRRARPRTSTPTTPSSPPPTPSRASPQPATP 126
>AK105798:Os06g0726200 | Length = 214 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 556 TRRSTTRSSAPLGPRRPPPHSCREASKQARP 648 TRR+ R+S P P PPP R + + A P Sbjct: 96 TRRARPRTSTPTTPSSPPPTPSRASPQPATP 126
>AK104020:Os06g0726200 | Length = 214 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 556 TRRSTTRSSAPLGPRRPPPHSCREASKQARP 648 TRR+ R+S P P PPP R + + A P Sbjct: 96 TRRARPRTSTPTTPSSPPPTPSRASPQPATP 126
>AK099339:Os06g0726200 | Length = 214 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 556 TRRSTTRSSAPLGPRRPPPHSCREASKQARP 648 TRR+ R+S P P PPP R + + A P Sbjct: 96 TRRARPRTSTPTTPSSPPPTPSRASPQPATP 126
>AK061042:Os06g0726200 | Length = 214 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 556 TRRSTTRSSAPLGPRRPPPHSCREASKQARP 648 TRR+ R+S P P PPP R + + A P Sbjct: 96 TRRARPRTSTPTTPSSPPPTPSRASPQPATP 126
>Os03g0811400:Os03g0811400 | Length = 301 Score = 28.9 bits (63), Expect = 5.1 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 1/95 (1%) Frame = -3 Query: 301 MSPVLISVSFAGRYGLANETVEAMAAPVWFL-T*PRPATMPPVFISVSFEGRYGLASETV 125 M PV ++ + A + E V M P +F+ + PA V ++ S E A+ Sbjct: 1 MFPVEVAAAAAAAGRMQGEAVVPMMLPPFFMDSGIWPAAAGVVDVAASAEEEAAAAAAAA 60 Query: 124 EATALACCLTRSRPEKRRSRVLISPGFPFRFVVVC 20 + ALA EKRR + S R V+ C Sbjct: 61 QDRALAASRNHREAEKRRRERIKSHLDRLRAVLAC 95
>Os02g0133600:Os02g0133600 | Length = 715 Score = 28.9 bits (63), Expect = 5.1 Identities = 21/79 (26%), Positives = 30/79 (37%) Frame = -2 Query: 431 DHRRGPHGTVARGELCRQVRFGQRDGGGHGRSCMVLDVAETGDDVACAHLG*LCGKVRLG 252 +HRR R +C+ + + +G +C+ LD GD VA R G Sbjct: 501 NHRRAFEQVFGRTVICKDLETATKVARDNGLNCITLD----GDQVA-----------RKG 545 Query: 251 QRDGGGHGRSCMVLDVAET 195 GG H C L +T Sbjct: 546 HMTGGFHDYRCSKLKFVKT 564
>AK109778:Os06g0360500 | Length = 150 Score = 28.9 bits (63), Expect = 5.1 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 18/80 (22%) Frame = -2 Query: 692 NLTQYTKQSKRDGSKGRACLLAS---------------LHECGGGRRGPSGAEDLVVDLR 558 N ++ T Q+ R+G+ CL A+ H C G + + L+ D Sbjct: 21 NKSRTTAQAARNGTLVLVCLCATHELEVWVLGQASAGAAHVCRAGDHAEAPLQKLLHDPL 80 Query: 557 VGHKRRAGNQEAG---GTRR 507 G RRAG+++ G G RR Sbjct: 81 AGAARRAGHEDGGRLLGVRR 100
>AK105213:Os01g0523000 | Length = 179 Score = 28.9 bits (63), Expect = 5.1 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 12/58 (20%) Frame = -2 Query: 644 RACLLASLHECGGGRRGPSGAE------DL---VVDL---RVGHKRRAGNQEAGGTRR 507 R C +A++H GGG RG A+ DL VVDL R G +RR + RR Sbjct: 95 RGCSVAAVHGAGGGGRGVGAADPATPEVDLPPPVVDLASPRPGAERRRPEEATDARRR 152
>AK103464:Os02g0256200 | Length = 342 Score = 28.9 bits (63), Expect = 5.1 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +3 Query: 318 YVKNHTGAAMASTISLAKPYLPAKLSTRDGAVGTAAMVIGGAV 446 YV+++ G A +++++ PYL A + RD AA G + Sbjct: 37 YVEHNGGDAAGTSVAIVPPYLDAAAAARDEPAAAAASPEGPVI 79
>AK103069:Os07g0187300 | Length = 308 Score = 28.9 bits (63), Expect = 5.1 Identities = 22/52 (42%), Positives = 25/52 (48%) Frame = +2 Query: 116 RGLHRLAGQAVPPLKANRDEHGWHRRGSRLRQEPYRSGHGLHRLVGQAVPSR 271 RG +R G AVP AN D R G R+ PY SG G R + PSR Sbjct: 110 RGGYRGGGDAVP--SANDDCFKCGRAGHWARECPYSSGGGGGRTGRYSPPSR 159
>AK101438:Os02g0256200 | Length = 342 Score = 28.9 bits (63), Expect = 5.1 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +3 Query: 318 YVKNHTGAAMASTISLAKPYLPAKLSTRDGAVGTAAMVIGGAV 446 YV+++ G A +++++ PYL A + RD AA G + Sbjct: 37 YVEHNGGDAAGTSVAIVPPYLDAAAAARDEPAAAAASPEGPVI 79
>AK059768:Os07g0187300 | Length = 202 Score = 28.9 bits (63), Expect = 5.1 Identities = 22/52 (42%), Positives = 25/52 (48%) Frame = +2 Query: 116 RGLHRLAGQAVPPLKANRDEHGWHRRGSRLRQEPYRSGHGLHRLVGQAVPSR 271 RG +R G AVP AN D R G R+ PY SG G R + PSR Sbjct: 4 RGGYRGGGDAVP--SANDDCFKCGRAGHWARECPYSSGGGGGRTGRYSPPSR 53
>AK120993: | Length = 340 Score = 28.9 bits (63), Expect = 5.1 Identities = 16/29 (55%), Positives = 17/29 (58%) Frame = +1 Query: 538 ARRLWPTRRSTTRSSAPLGPRRPPPHSCR 624 AR W T RS +R SAP GPR P P R Sbjct: 176 ARIAWITSRSASRPSAP-GPRGPRPRRHR 203
>AK108320:Os07g0588600 | Length = 220 Score = 28.9 bits (63), Expect = 5.1 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 739 ILLAVGAREDGVIISAASYSYFPMF*SLCSVCDIIYGVLKQL 864 ++LA G R++ ++ A+ + P CSVC +YG + L Sbjct: 61 LMLAHGVRDEAEVVGVAAATAKPQHGYECSVCGKVYGSYQAL 102
>AK060539:Os01g0821700 | Length = 155 Score = 28.9 bits (63), Expect = 5.1 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 11/48 (22%) Frame = +1 Query: 550 WPTRRSTTRSSAPLGPRR-----------PPPHSCREASKQARPFDPS 660 WP R ST R P PRR PPPHSC + P P+ Sbjct: 55 WPPRSSTPRQPPP-PPRRPPAWGPSTRSPPPPHSCAWRAPPLPPPPPA 101
>Os07g0609700:Os07g0609700 | Length = 625 Score = 28.5 bits (62), Expect = 6.6 Identities = 18/60 (30%), Positives = 24/60 (40%) Frame = -2 Query: 389 LCRQVRFGQRDGGGHGRSCMVLDVAETGDDVACAHLG*LCGKVRLGQRDGGGHGRSCMVL 210 L + +G+ G G G C + TGD C H G+ D H RSC+ L Sbjct: 13 LVTEHHYGEGSGSGSGNPCAACERVVTGDGYRCEH----------GECDFHVH-RSCLAL 61
>AK111688:Os03g0186500 | Length = 1308 Score = 28.5 bits (62), Expect = 6.6 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 6/86 (6%) Frame = +1 Query: 532 FPARRLWPTRRSTTRSSAPLGPRRPPPHSC------REASKQARPFDPSRLLCFVYCVKL 693 FP W +T +S P P PPPH+ R S + P + +L Sbjct: 4 FPFFLPWIPMATTVKSRPPPPPPPPPPHALPAVTTRRRGSSSSSPAAAKASVFLSAPREL 63 Query: 694 SVVRLSMVIHSI*YRILLAVGAREDG 771 +V S+++ ++ + A A EDG Sbjct: 64 LLVLCSLLVVAVLFVSSSAAAAAEDG 89
>Os06g0147700:Os06g0147700 | Length = 182 Score = 28.1 bits (61), Expect = 8.6 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -2 Query: 233 HGRSCMVLDVAETRDDATRVHL 168 H + M+L + E R+DATR HL Sbjct: 146 HAQEWMILGIKEQREDATRSHL 167
>AK108100:Os02g0189400 | Length = 292 Score = 28.1 bits (61), Expect = 8.6 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +3 Query: 105 QASAVASTVSLAKPYLPSKLTEMNTGGIVAGLGYVKNHTGAAMA 236 +AS+ S S KPY P + N+GG G GY GA A Sbjct: 128 EASSRGSKFSPPKPYQPRYSSNSNSGGGGGGYGYGGPGAGAYAA 171 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,912,945 Number of extensions: 595698 Number of successful extensions: 2407 Number of sequences better than 10.0: 39 Number of HSP's gapped: 2396 Number of HSP's successfully gapped: 42 Length of query: 298 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 198 Effective length of database: 11,395,755 Effective search space: 2256359490 Effective search space used: 2256359490 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
