| Clone Name | FLbaf19k16 |
|---|---|
| Clone Library Name | barley_pub |
>Q5G8Z3:EA1_MAIZE Protein EGG APPARATUS-1 - Zea mays (Maize)| Length = 94 Score = 36.2 bits (82), Expect = 0.18 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Frame = +3 Query: 381 PAKLSTRD----GAVGTA-AMVIGGAVGAYFLWXXXXXXXXXXXXXXXXXXXXFLISRTA 545 PA ++ +D GA+G A A G G YFLW ++I R Sbjct: 5 PAIVNMKDDDGIGAMGAAVAFAAMGVFGIYFLWPVVGPTSAGMMMKAPGAAG-WVICRAV 63 Query: 546 FVANPQVYYQILRT 587 F ANPQ+Y+ ILRT Sbjct: 64 FEANPQLYFTILRT 77
>P07856:SERI1_BOMMO Sericin 1 precursor - Bombyx mori (Silk moth)| Length = 1186 Score = 35.8 bits (81), Expect = 0.24 Identities = 24/80 (30%), Positives = 37/80 (46%) Frame = +3 Query: 117 VASTVSLAKPYLPSKLTEMNTGGIVAGLGYVKNHTGAAMASTVSLAKPYLPAKLTEMSTG 296 V+ST S + SK T G + GY +H G +++ST S + K ST Sbjct: 592 VSSTGSTSNTDSSSKSAGSRTSGGSSTYGYSSSHRGGSVSSTGSSSNTDSSTKNAGSSTS 651 Query: 297 DIVTGLGYVKNHTGAAMAST 356 + GY +H G +++ST Sbjct: 652 GGSSTYGYSSSHRGGSVSST 671 Score = 34.3 bits (77), Expect = 0.69 Identities = 23/84 (27%), Positives = 38/84 (45%) Frame = +3 Query: 105 QASAVASTVSLAKPYLPSKLTEMNTGGIVAGLGYVKNHTGAAMASTVSLAKPYLPAKLTE 284 + +V+ST S + +K +T G + GY +H G +++ST S + K Sbjct: 626 RGGSVSSTGSSSNTDSSTKNAGSSTSGGSSTYGYSSSHRGGSVSSTGSSSNTDSSTKSAG 685 Query: 285 MSTGDIVTGLGYVKNHTGAAMAST 356 ST + GY H G ++ST Sbjct: 686 SSTSGGSSTYGYSSRHRGGRVSST 709
>Q10977:PPSA_MYCTU Phenolpthiocerol synthesis polyketide synthase ppsA - Mycobacterium| tuberculosis Length = 1876 Score = 32.3 bits (72), Expect = 2.6 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 12/102 (11%) Frame = +3 Query: 42 GKPGEMSTRDLL-----------FSGLDLVKQQASAVASTVSLAKPY-LPSKLTEMNTGG 185 G+P E + RDL+ GL AS + +L LP L E +TG Sbjct: 1124 GQPPERAHRDLIPDLAELLAMRGIDGLPFSWTVASWTQHSSNLTVAIDLPEALPEGSTGP 1183 Query: 186 IVAGLGYVKNHTGAAMASTVSLAKPYLPAKLTEMSTGDIVTG 311 ++ ++ A S V+ ++ Y+PA + ++S GD+VTG Sbjct: 1184 LLDAAVHL------AALSDVADSRLYVPASIEQISLGDVVTG 1219
>Q1LRQ3:PTH_RALME Peptidyl-tRNA hydrolase - Ralstonia metallidurans (strain CH34 /| ATCC 43123 / DSM 2839) Length = 198 Score = 30.8 bits (68), Expect = 7.7 Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 10/84 (11%) Frame = -2 Query: 611 GGGRRGPSGAEDLVVDLR----------VGHKRRAGNQEAGGTRRLHHXXXXXXXGCSRP 462 GGG G +G +D+ L VGH R A AGG + + R Sbjct: 107 GGGSGGHNGLKDISAHLTTQDYWRLRIGVGHPRNAPGGAAGGREDVVNFVLKPP----RK 162 Query: 461 EKVGAHGAPDDHRRGPHGTVARGE 390 E+ A D GP GT+ARGE Sbjct: 163 EEQQAIDEAIDRCIGPLGTLARGE 186
>Q4JUN0:GATB_CORJK Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B -| Corynebacterium jeikeium (strain K411) Length = 505 Score = 30.8 bits (68), Expect = 7.7 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = +3 Query: 51 GEMSTRDLLFSGLDLVKQQASAVASTVSLAKPYLPSKLTEMNTGGIVAGLGYV 209 G+ + + + SGLD+ Q + VAS V+ K L +KL G++AG G V Sbjct: 382 GKANEQGVELSGLDITPTQVARVASLVNEGK--LTTKLARQAVDGVLAGEGDV 432 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 144,672,421 Number of extensions: 3115702 Number of successful extensions: 8780 Number of sequences better than 10.0: 5 Number of HSP's gapped: 8769 Number of HSP's successfully gapped: 6 Length of query: 298 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 186 Effective length of database: 69,965,399 Effective search space: 13013564214 Effective search space used: 13013564214 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)