| Clone Name | FLbaf19k16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 71.9 bits (36), Expect = 4e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 498 atgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgtggccaac 557 |||||||||||||| || | ||||||| |||| || ||||||| ||| || | ||||||| Sbjct: 24752204 atgatgaaggcgccgggcggcgccggcctcctcatctcccgcatggccttcgaggccaac 24752263 Query: 558 ccgcaggtctactaccagatcctccgcaccgc 589 |||||| |||||||||| |||||| |||||| Sbjct: 24752264 ccgcagctctactaccacctcctccacaccgc 24752295 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 498 atgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgtggccaac 557 |||||||||||||| || |||||||||| | | || |||||| ||||||| |||| ||| Sbjct: 24808441 atgatgaaggcgccgggcgccgccggctacgtcatctcccgcgcggcgttcctggcgaac 24808382 Query: 558 ccgcaggtctact 570 ||||||||||||| Sbjct: 24808381 ccgcaggtctact 24808369 Score = 60.0 bits (30), Expect = 1e-05 Identities = 111/138 (80%) Strand = Plus / Plus Query: 491 cggcgccatgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgt 550 ||||||||| ||||| ||||| || |||||||||| | | || |||||| ||||||| | Sbjct: 24756365 cggcgccatcatgaacgcgccgggcgccgccggctacgtcatctcccgcgcggcgttcct 24756424 Query: 551 ggccaacccgcaggtctactaccagatcctccgcaccgctggggccgcggcggccgccgc 610 ||| ||||| || |||||| ||| |||| ||||| | || ||| |||||||||||| Sbjct: 24756425 ggcgaaccccaagctctacttccacctcctgcgcacggtgggcgccaaggcggccgccgc 24756484 Query: 611 cgcattcgtgtagggaag 628 ||| ||| |||||||||| Sbjct: 24756485 cgctttcctgtagggaag 24756502
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 71.9 bits (36), Expect = 4e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 498 atgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgtggccaac 557 |||||||||||||| || | ||||||| |||| || ||||||| ||| || | ||||||| Sbjct: 108141 atgatgaaggcgccgggcggcgccggcctcctcatctcccgcatggccttcgaggccaac 108200 Query: 558 ccgcaggtctactaccagatcctccgcaccgc 589 |||||| |||||||||| |||||| |||||| Sbjct: 108201 ccgcagctctactaccacctcctccacaccgc 108232 Score = 60.0 bits (30), Expect = 1e-05 Identities = 111/138 (80%) Strand = Plus / Plus Query: 491 cggcgccatgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgt 550 ||||||||| ||||| ||||| || |||||||||| | | || |||||| ||||||| | Sbjct: 112302 cggcgccatcatgaacgcgccgggcgccgccggctacgtcatctcccgcgcggcgttcct 112361 Query: 551 ggccaacccgcaggtctactaccagatcctccgcaccgctggggccgcggcggccgccgc 610 ||| ||||| || |||||| ||| |||| ||||| | || ||| |||||||||||| Sbjct: 112362 ggcgaaccccaagctctacttccacctcctgcgcacggtgggcgccaaggcggccgccgc 112421 Query: 611 cgcattcgtgtagggaag 628 ||| ||| |||||||||| Sbjct: 112422 cgctttcctgtagggaag 112439
>ref|NM_001066763.1| Oryza sativa (japonica cultivar-group) Os07g0606000 (Os07g0606000) mRNA, complete cds Length = 1789 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 498 atgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgtggccaac 557 |||||||||||||| || |||||||||| | | || |||||| ||||||| |||| ||| Sbjct: 1431 atgatgaaggcgccgggcgccgccggctacgtcatctcccgcgcggcgttcctggcgaac 1372 Query: 558 ccgcaggtctact 570 ||||||||||||| Sbjct: 1371 ccgcaggtctact 1359
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 498 atgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgtggccaac 557 |||||||||||||| || |||||||||| | | || |||||| ||||||| |||| ||| Sbjct: 42892 atgatgaaggcgccgggcgccgccggctacgtcatctcccgcgcggcgttcctggcgaac 42833 Query: 558 ccgcaggtctact 570 ||||||||||||| Sbjct: 42832 ccgcaggtctact 42820
>dbj|AK106894.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-G10, full insert sequence Length = 1789 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 498 atgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgtggccaac 557 |||||||||||||| || |||||||||| | | || |||||| ||||||| |||| ||| Sbjct: 1431 atgatgaaggcgccgggcgccgccggctacgtcatctcccgcgcggcgttcctggcgaac 1372 Query: 558 ccgcaggtctact 570 ||||||||||||| Sbjct: 1371 ccgcaggtctact 1359
>ref|NM_001066761.1| Oryza sativa (japonica cultivar-group) Os07g0605400 (Os07g0605400) mRNA, complete cds Length = 705 Score = 60.0 bits (30), Expect = 1e-05 Identities = 111/138 (80%) Strand = Plus / Plus Query: 491 cggcgccatgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgt 550 ||||||||| ||||| ||||| || |||||||||| | | || |||||| ||||||| | Sbjct: 296 cggcgccatcatgaacgcgccgggcgccgccggctacgtcatctcccgcgcggcgttcct 355 Query: 551 ggccaacccgcaggtctactaccagatcctccgcaccgctggggccgcggcggccgccgc 610 ||| ||||| || |||||| ||| |||| ||||| | || ||| |||||||||||| Sbjct: 356 ggcgaaccccaagctctacttccacctcctgcgcacggtgggcgccaaggcggccgccgc 415 Query: 611 cgcattcgtgtagggaag 628 ||| ||| |||||||||| Sbjct: 416 cgctttcctgtagggaag 433
>dbj|AK103128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N22, full insert sequence Length = 679 Score = 60.0 bits (30), Expect = 1e-05 Identities = 111/138 (80%) Strand = Plus / Plus Query: 491 cggcgccatgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgt 550 ||||||||| ||||| ||||| || |||||||||| | | || |||||| ||||||| | Sbjct: 270 cggcgccatcatgaacgcgccgggcgccgccggctacgtcatctcccgcgcggcgttcct 329 Query: 551 ggccaacccgcaggtctactaccagatcctccgcaccgctggggccgcggcggccgccgc 610 ||| ||||| || |||||| ||| |||| ||||| | || ||| |||||||||||| Sbjct: 330 ggcgaaccccaagctctacttccacctcctgcgcacggtgggcgccaaggcggccgccgc 389 Query: 611 cgcattcgtgtagggaag 628 ||| ||| |||||||||| Sbjct: 390 cgctttcctgtagggaag 407
>dbj|AK068670.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161J19, full insert sequence Length = 706 Score = 60.0 bits (30), Expect = 1e-05 Identities = 111/138 (80%) Strand = Plus / Plus Query: 491 cggcgccatgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgt 550 ||||||||| ||||| ||||| || |||||||||| | | || |||||| ||||||| | Sbjct: 297 cggcgccatcatgaacgcgccgggcgccgccggctacgtcatctcccgcgcggcgttcct 356 Query: 551 ggccaacccgcaggtctactaccagatcctccgcaccgctggggccgcggcggccgccgc 610 ||| ||||| || |||||| ||| |||| ||||| | || ||| |||||||||||| Sbjct: 357 ggcgaaccccaagctctacttccacctcctgcgcacggtgggcgccaaggcggccgccgc 416 Query: 611 cgcattcgtgtagggaag 628 ||| ||| |||||||||| Sbjct: 417 cgctttcctgtagggaag 434
>emb|CT830851.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA035G24, full insert sequence Length = 1035 Score = 52.0 bits (26), Expect = 0.003 Identities = 110/138 (79%) Strand = Plus / Plus Query: 491 cggcgccatgatgaaggcgcctggtgccgccggcttcctgatttcccgcacggcgtttgt 550 |||||||| ||||| ||||| || |||||||||| | | || |||||| ||||||| | Sbjct: 239 cggcgccaccatgaacgcgccgggcgccgccggctacgtcatctcccgcgcggcgttcct 298 Query: 551 ggccaacccgcaggtctactaccagatcctccgcaccgctggggccgcggcggccgccgc 610 ||| ||||| || |||||| ||| |||| ||||| | || ||| |||||||||||| Sbjct: 299 ggcgaaccccaagctctacttccacctcctgcgcacggtgggcgccaaggcggccgccgc 358 Query: 611 cgcattcgtgtagggaag 628 ||| ||| |||||||||| Sbjct: 359 cgctttcctgtagggaag 376
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 48.1 bits (24), Expect = 0.055 Identities = 24/24 (100%) Strand = Plus / Minus Query: 480 ccagccgccgccggcgccatgatg 503 |||||||||||||||||||||||| Sbjct: 3967851 ccagccgccgccggcgccatgatg 3967828
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 48.1 bits (24), Expect = 0.055 Identities = 24/24 (100%) Strand = Plus / Minus Query: 480 ccagccgccgccggcgccatgatg 503 |||||||||||||||||||||||| Sbjct: 27871 ccagccgccgccggcgccatgatg 27848
>ref|XM_845324.1| PREDICTED: Canis familiaris similar to CG13139-PA (LOC608332), mRNA Length = 1644 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Plus Query: 589 ctggggccgcggcggccgccgcc 611 ||||||||||||||||||||||| Sbjct: 428 ctggggccgcggcggccgccgcc 450
>emb|AL589862.28| Human DNA sequence from clone GS1-165F21 on chromosome 10 Contains the 5' end of the PAX2 gene for paired box gene 2 and fifteen CpG islands, complete sequence Length = 187101 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Plus Query: 475 ccgccccagccgccgccggcgcc 497 ||||||||||||||||||||||| Sbjct: 96818 ccgccccagccgccgccggcgcc 96840
>ref|XM_001224228.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_05015) mRNA, complete cds Length = 1536 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 468 gctgcagccgccccagccgccgccgg 493 ||||||||||||||||||| |||||| Sbjct: 1395 gctgcagccgccccagccggcgccgg 1370
>ref|NM_001068459.1| Oryza sativa (japonica cultivar-group) Os08g0445000 (Os08g0445000) mRNA, complete cds Length = 2168 Score = 44.1 bits (22), Expect = 0.85 Identities = 28/30 (93%) Strand = Plus / Minus Query: 466 ctgctgcagccgccccagccgccgccggcg 495 ||||||| |||||| ||||||||||||||| Sbjct: 1198 ctgctgctgccgccgcagccgccgccggcg 1169
>ref|XM_525091.2| PREDICTED: Pan troglodytes similar to Trim67 protein (LOC469707), mRNA Length = 4137 Score = 44.1 bits (22), Expect = 0.85 Identities = 31/34 (91%) Strand = Plus / Plus Query: 464 gcctgctgcagccgccccagccgccgccggcgcc 497 ||||| |||||||||| | ||||||||||||||| Sbjct: 2531 gcctggtgcagccgccgccgccgccgccggcgcc 2564
>ref|XM_001122308.1| PREDICTED: Apis mellifera similar to Protein tiptop (LOC726581), mRNA Length = 3243 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 592 gggccgcggcggccgccgccgc 613 |||||||||||||||||||||| Sbjct: 910 gggccgcggcggccgccgccgc 889
>emb|CR848749.13| Zebrafish DNA sequence from clone CH211-147F13 in linkage group 15, complete sequence Length = 161648 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Plus Query: 836 atattatatatggtgttttgaagcaa 861 ||||||||||| |||||||||||||| Sbjct: 138218 atattatatatagtgttttgaagcaa 138243
>ref|XM_592282.2| PREDICTED: Bos taurus similar to Zinc finger protein ZIC 2 (Zinc finger protein of the cerebellum 2) (LOC514433), mRNA Length = 2681 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgca 614 |||||||||||||||||||||| Sbjct: 96 ggccgcggcggccgccgccgca 75
>gb|AC094507.9| Rattus norvegicus 1 BAC CH230-4E15 (Children's Hospital Oakland Research Institute) complete sequence Length = 98521 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 ccgctggggccgcggcggccgccgcc 611 |||||| ||||||||||||||||||| Sbjct: 64583 ccgctgcggccgcggcggccgccgcc 64558
>gb|AC102547.8| Mus musculus chromosome 7, clone RP23-134L4, complete sequence Length = 220452 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 ccgctggggccgcggcggccgccgcc 611 |||||| ||||||||||||||||||| Sbjct: 147285 ccgctgcggccgcggcggccgccgcc 147260
>gb|AC163434.5| Mus musculus chromosome 7, clone RP23-320N24, complete sequence Length = 224337 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Plus Query: 586 ccgctggggccgcggcggccgccgcc 611 |||||| ||||||||||||||||||| Sbjct: 123702 ccgctgcggccgcggcggccgccgcc 123727
>gb|AC090330.22| Homo sapiens chromosome 18, clone RP11-813B21, complete sequence Length = 160530 Score = 44.1 bits (22), Expect = 0.85 Identities = 31/34 (91%) Strand = Plus / Plus Query: 465 cctgctgcagccgccccagccgccgccggcgcca 498 ||||| ||||||||||| |||||||||| ||||| Sbjct: 52990 cctgccgcagccgcccccgccgccgccgccgcca 53023
>gb|AY442327.1| Homo sapiens Werner syndrome (WRN) gene, complete cds Length = 143624 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 ctgctgcagccgccccagccgccgcc 491 |||||||||||||| ||||||||||| Sbjct: 1740 ctgctgcagccgccgcagccgccgcc 1765
>dbj|AK146546.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920024H09 product:deformed epidermal autoregulatory factor 1 (Drosophila), full insert sequence Length = 2065 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 ccgctggggccgcggcggccgccgcc 611 |||||| ||||||||||||||||||| Sbjct: 132 ccgctgcggccgcggcggccgccgcc 107
>dbj|AK155836.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730228O19 product:Deaf1 protein homolog [Mus musculus], full insert sequence Length = 2266 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 ccgctggggccgcggcggccgccgcc 611 |||||| ||||||||||||||||||| Sbjct: 221 ccgctgcggccgcggcggccgccgcc 196
>dbj|AK158586.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230019E19 product:deformed epidermal autoregulatory factor 1 (Drosophila), full insert sequence Length = 1632 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 ccgctggggccgcggcggccgccgcc 611 |||||| ||||||||||||||||||| Sbjct: 46 ccgctgcggccgcggcggccgccgcc 21
>dbj|AK158314.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930102L22 product:hypothetical protein, full insert sequence Length = 2209 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 458 tctctggcctgctgcagccgcc 479 |||||||||||||||||||||| Sbjct: 1272 tctctggcctgctgcagccgcc 1293
>gb|AC090465.15| Homo sapiens chromosome 18, clone RP11-527C6, complete sequence Length = 174535 Score = 44.1 bits (22), Expect = 0.85 Identities = 31/34 (91%) Strand = Plus / Plus Query: 465 cctgctgcagccgccccagccgccgccggcgcca 498 ||||| ||||||||||| |||||||||| ||||| Sbjct: 171759 cctgccgcagccgcccccgccgccgccgccgcca 171792
>gb|AF195513.2| Homo sapiens Pur-gamma A-form (PURG) mRNA, complete cds Length = 2886 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 466 ctgctgcagccgccccagccgccgcc 491 |||||||||||||| ||||||||||| Sbjct: 563 ctgctgcagccgccgcagccgccgcc 538
>dbj|AK082115.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230009B13 product:DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 homolog [Mus musculus], full insert sequence Length = 2108 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 ccgctggggccgcggcggccgccgcc 611 |||||| ||||||||||||||||||| Sbjct: 108 ccgctgcggccgcggcggccgccgcc 83
>gb|AC084736.5| Homo sapiens chromosome 8, clone RP11-473A17, complete sequence Length = 180098 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 ctgctgcagccgccccagccgccgcc 491 |||||||||||||| ||||||||||| Sbjct: 64507 ctgctgcagccgccgcagccgccgcc 64532
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 0.85 Identities = 28/30 (93%) Strand = Plus / Minus Query: 466 ctgctgcagccgccccagccgccgccggcg 495 ||||||| |||||| ||||||||||||||| Sbjct: 21694213 ctgctgctgccgccgcagccgccgccggcg 21694184
>ref|NM_001015508.1| Homo sapiens purine-rich element binding protein G (PURG), transcript variant B, mRNA gb|AY077841.1| Homo sapiens Pur-gamma B-form mRNA, complete cds; alternatively spliced Length = 2709 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 466 ctgctgcagccgccccagccgccgcc 491 |||||||||||||| ||||||||||| Sbjct: 563 ctgctgcagccgccgcagccgccgcc 538
>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C12 Length = 136799 Score = 44.1 bits (22), Expect = 0.85 Identities = 28/30 (93%) Strand = Plus / Minus Query: 466 ctgctgcagccgccccagccgccgccggcg 495 ||||||| |||||| ||||||||||||||| Sbjct: 61783 ctgctgctgccgccgcagccgccgccggcg 61754
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 44.1 bits (22), Expect = 0.85 Identities = 28/30 (93%) Strand = Plus / Minus Query: 466 ctgctgcagccgccccagccgccgccggcg 495 ||||||| |||||| ||||||||||||||| Sbjct: 154387 ctgctgctgccgccgcagccgccgccggcg 154358
>dbj|AK106866.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-C12, full insert sequence Length = 2168 Score = 44.1 bits (22), Expect = 0.85 Identities = 28/30 (93%) Strand = Plus / Minus Query: 466 ctgctgcagccgccccagccgccgccggcg 495 ||||||| |||||| ||||||||||||||| Sbjct: 1198 ctgctgctgccgccgcagccgccgccggcg 1169
>gb|AF181896.1|HSWRNG1 Homo sapiens WRN (WRN) gene, partial sequence Length = 98844 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 ctgctgcagccgccccagccgccgcc 491 |||||||||||||| ||||||||||| Sbjct: 13662 ctgctgcagccgccgcagccgccgcc 13687
>ref|NM_016874.1| Mus musculus deformed epidermal autoregulatory factor 1 (Drosophila) (Deaf1), mRNA gb|AF102818.1|AF102818 Mus musculus deformed epidermal autoregulatory factor 1 mRNA, complete cds Length = 2043 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 ccgctggggccgcggcggccgccgcc 611 |||||| ||||||||||||||||||| Sbjct: 115 ccgctgcggccgcggcggccgccgcc 90
>ref|NM_031801.1| Rattus norvegicus deformed epidermal autoregulatory factor 1 (Drosophila) (Deaf1), mRNA gb|AF055884.1|AF055884 Rattus norvegicus nuclear DEAF-1 related transcriptional regulator (NUDR) mRNA, complete cds Length = 2120 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 ccgctggggccgcggcggccgccgcc 611 |||||| ||||||||||||||||||| Sbjct: 202 ccgctgcggccgcggcggccgccgcc 177
>gb|AF032113.1|AF032113 Homo sapiens Werner Syndrome gene, promoter region and 5' UTR, partial sequence Length = 1068 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 ctgctgcagccgccccagccgccgcc 491 |||||||||||||| ||||||||||| Sbjct: 371 ctgctgcagccgccgcagccgccgcc 396
>emb|AL627085.13| Mouse DNA sequence from clone RP23-374N19 on chromosome 4, complete sequence Length = 79097 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 458 tctctggcctgctgcagccgcc 479 |||||||||||||||||||||| Sbjct: 15472 tctctggcctgctgcagccgcc 15493
>dbj|AB003173.1| Homo sapiens gene for Werner Syndrome helicase, Promoter region and 5'UTR, partial sequence Length = 2775 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 ctgctgcagccgccccagccgccgcc 491 |||||||||||||| ||||||||||| Sbjct: 1962 ctgctgcagccgccgcagccgccgcc 1987
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 1812174 ggccgcggcggccgccgccgc 1812194
>gb|EF032329.1| Homo sapiens matrix metallopeptidase 15 (membrane-inserted) (MMP15) gene, complete cds Length = 24793 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 ctgctgcagccgccccagccg 486 ||||||||||||||||||||| Sbjct: 9627 ctgctgcagccgccccagccg 9607
>ref|XM_522749.2| PREDICTED: Pan troglodytes forkhead box O1A (FOXO1A), mRNA Length = 6312 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 825 ggccgcggcggccgccgccgc 805
>gb|CP000449.1| Maricaulis maris MCS10, complete genome Length = 3368780 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 ggcatcgtcgcgggtctcggc 203 ||||||||||||||||||||| Sbjct: 1007109 ggcatcgtcgcgggtctcggc 1007129
>gb|AC190478.1| Pan troglodytes BAC clone CH251-509H20 from chromosome 7, complete sequence Length = 206620 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 620 gtagggaagcaagcaagcaag 640 ||||||||||||||||||||| Sbjct: 91910 gtagggaagcaagcaagcaag 91930
>gb|AC185996.2| Pan troglodytes BAC clone CH251-259B13 from chromosome 11, complete sequence Length = 153052 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 64657 ggccgcggcggccgccgccgc 64677
>ref|XM_001092738.1| PREDICTED: Macaca mulatta similar to iroquois homeobox protein 3 (LOC704386), mRNA Length = 1982 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 561 ggccgcggcggccgccgccgc 581
>ref|XM_001088437.1| PREDICTED: Macaca mulatta forkhead box O1A (FOXO1A), mRNA Length = 3166 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 918 ggccgcggcggccgccgccgc 898
>ref|XM_001105061.1| PREDICTED: Macaca mulatta similar to G-rich sequence factor 1 (GRSF-1) (LOC706301), mRNA Length = 4003 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 362 ggccgcggcggccgccgccgc 342
>ref|XM_962817.1| PREDICTED: Tribolium castaneum similar to 60S acidic ribosomal protein P2 (Acidic ribosomal protein RPA1) (LOC656276), mRNA Length = 430 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 466 ctgctgcagccgccccagccgccgc 490 |||||||||| |||||||||||||| Sbjct: 262 ctgctgcagctgccccagccgccgc 286
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 gccgccccagccgccgccggcgcca 498 |||||||||||||||||| |||||| Sbjct: 2493458 gccgccccagccgccgccagcgcca 2493482 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 4701988 ggccgcggcggccgccgccgc 4702008
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 469 ctgcagccgccccagccgccgccggcgcc 497 ||||||||||| | ||||||||||||||| Sbjct: 181365 ctgcagccgccgccgccgccgccggcgcc 181337
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 469 ctgcagccgccccagccgccgccggcgcc 497 ||||||||||| | ||||||||||||||| Sbjct: 191385 ctgcagccgccgccgccgccgccggcgcc 191413
>ref|XM_870462.1| PREDICTED: Bos taurus similar to SOX-1 protein (LOC618135), mRNA Length = 1110 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 582 ggccgcggcggccgccgccgc 562
>gb|AC145307.3| Mus musculus BAC clone RP24-400C6 from chromosome 17, complete sequence Length = 203180 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 625 gaagcaagcaagcaagcgcgc 645 ||||||||||||||||||||| Sbjct: 40439 gaagcaagcaagcaagcgcgc 40459
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 469 ctgcagccgccccagccgccgccggcgcc 497 ||||||||||| | ||||||||||||||| Sbjct: 66579 ctgcagccgccgccgccgccgccggcgcc 66607
>ref|XM_854885.1| PREDICTED: Canis familiaris similar to aristaless related homeobox, transcript variant 5 (LOC608251), mRNA Length = 1794 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 456 ggccgcggcggccgccgccgc 436
>ref|XM_844762.1| PREDICTED: Canis familiaris similar to aristaless related homeobox, transcript variant 4 (LOC608251), mRNA Length = 1824 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 486 ggccgcggcggccgccgccgc 466
>gb|AC124583.4| Mus musculus BAC clone RP23-123P18 from chromosome 17, complete sequence Length = 221980 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 625 gaagcaagcaagcaagcgcgc 645 ||||||||||||||||||||| Sbjct: 132558 gaagcaagcaagcaagcgcgc 132578
>gb|AC007094.3| Homo sapiens BAC clone RP11-289L12 from 7, complete sequence Length = 145135 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 620 gtagggaagcaagcaagcaag 640 ||||||||||||||||||||| Sbjct: 88237 gtagggaagcaagcaagcaag 88257
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 95190 ggccgcggcggccgccgccgc 95210
>gb|BT007455.1| Homo sapiens forkhead box O1A (rhabdomyosarcoma) mRNA, complete cds Length = 1968 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 303 ggccgcggcggccgccgccgc 283
>gb|BC070065.1| Homo sapiens forkhead box O1A (rhabdomyosarcoma), mRNA (cDNA clone IMAGE:30345006), partial cds Length = 2482 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 679 ggccgcggcggccgccgccgc 659
>gb|BC021981.2| Homo sapiens forkhead box O1A (rhabdomyosarcoma), mRNA (cDNA clone MGC:1750 IMAGE:2959021), complete cds Length = 2413 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 616 ggccgcggcggccgccgccgc 596
>gb|AC012182.7| Homo sapiens chromosome 16 clone RP11-332G1, complete sequence Length = 188926 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 ctgctgcagccgccccagccg 486 ||||||||||||||||||||| Sbjct: 108244 ctgctgcagccgccccagccg 108224
>ref|NM_001046395.1| Bos taurus phosphatidylglycerophosphate synthase 1 (PGS1), mRNA gb|BC105551.1| Bos taurus phosphatidylglycerophosphate synthase 1, mRNA (cDNA clone MGC:129082 IMAGE:8121736), complete cds Length = 3607 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 472 cagccgccccagccgccgccggcgccatg 500 |||||||| |||||||||||| ||||||| Sbjct: 34 cagccgccgcagccgccgccgccgccatg 6
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 594 gccgcggcggccgccgccgca 614 ||||||||||||||||||||| Sbjct: 2264050 gccgcggcggccgccgccgca 2264070 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 595 ccgcggcggccgccgccgcat 615 ||||||||||||||||||||| Sbjct: 3000491 ccgcggcggccgccgccgcat 3000511
>gb|AE012251.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 159 of 460 of the complete genome Length = 10321 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 aaagctctccacgcgcgacgg 406 ||||||||||||||||||||| Sbjct: 4840 aaagctctccacgcgcgacgg 4820
>gb|AC015805.8| Homo sapiens chromosome , clone RP11-128I14, complete sequence Length = 13794 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 ccgctggggccgcggcggccg 606 ||||||||||||||||||||| Sbjct: 5770 ccgctggggccgcggcggccg 5750
>emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on chromosome 13 Contains a ring finger protein 12 (RNF12) pseudogene, the 5' end of the FOXO1A gene for forkhead box O1A (rhabdomyosarcoma), the 3' end of the MRPS31 gene for mitochondrial ribosomal protein S31 and a CpG island, complete sequence Length = 151261 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 60587 ggccgcggcggccgccgccgc 60607
>gb|AC009549.6| Homo sapiens chromosome 11, clone RP11-359E10, complete sequence Length = 180442 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 ccgctggggccgcggcggccg 606 ||||||||||||||||||||| Sbjct: 137057 ccgctggggccgcggcggccg 137037
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 aaagctctccacgcgcgacgg 406 ||||||||||||||||||||| Sbjct: 3282803 aaagctctccacgcgcgacgg 3282823
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 334055 ggccgcggcggccgccgccgc 334075
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 126442 ggccgcggcggccgccgccgc 126462
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 167233 ggccgcggcggccgccgccgc 167253
>gb|AF533985.1| Streptomyces sp. EN27 plasmid pEN2701, complete sequence Length = 12855 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 596 cgcggcggccgccgccgcattcgtg 620 |||||||||| |||||||||||||| Sbjct: 7034 cgcggcggccaccgccgcattcgtg 7010
>gb|AF494013.1| Phytophthora infestans putative endo-1,3-beta-glucanase (endo1) gene, complete cds Length = 3149 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 gcctccaccgtctcgttggcc 254 ||||||||||||||||||||| Sbjct: 1881 gcctccaccgtctcgttggcc 1861
>gb|AC019103.8| Homo sapiens BAC clone RP11-460I19 from 4, complete sequence Length = 177950 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 cgctggggccgcggcggccgc 607 ||||||||||||||||||||| Sbjct: 74580 cgctggggccgcggcggccgc 74560
>gb|AY890174.1| Synthetic construct Homo sapiens clone FLH015809.01X forkhead box O1A (FOXO1A) mRNA, complete cds Length = 1968 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 303 ggccgcggcggccgccgccgc 283
>gb|AY890173.1| Synthetic construct Homo sapiens clone FLH015808.01X forkhead box O1A (FOXO1A) mRNA, complete cds Length = 1968 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 303 ggccgcggcggccgccgccgc 283
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 34683 ggccgcggcggccgccgccgc 34663
>ref|XM_314526.2| Anopheles gambiae str. PEST ENSANGP00000016235 (ENSANGG00000013746), partial mRNA Length = 2052 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 594 gccgcggcggccgccgccgca 614 ||||||||||||||||||||| Sbjct: 1529 gccgcggcggccgccgccgca 1509
>emb|AJ335949.1|HSA335949 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KJ7C Length = 670 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 cgctggggccgcggcggccgc 607 ||||||||||||||||||||| Sbjct: 21 cgctggggccgcggcggccgc 1
>emb|AJ334518.1|HSA334518 Homo sapiens genomic sequence surrounding NotI site, clone NL1-HL14C Length = 591 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 cgctggggccgcggcggccgc 607 ||||||||||||||||||||| Sbjct: 21 cgctggggccgcggcggccgc 1
>emb|AJ323833.1|HSA323833 Homo sapiens genomic sequence surrounding NotI site, clone NB1-109C Length = 709 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 cgctggggccgcggcggccgc 607 ||||||||||||||||||||| Sbjct: 21 cgctggggccgcggcggccgc 1
>emb|AJ325062.1|HSA325062 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CI10R Length = 703 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 cgctggggccgcggcggccgc 607 ||||||||||||||||||||| Sbjct: 21 cgctggggccgcggcggccgc 1
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 gccgccccagccgccgccggcgcca 498 ||||||||||||||||||| ||||| Sbjct: 476364 gccgccccagccgccgccgccgcca 476388
>ref|NM_002015.2| Homo sapiens forkhead box O1A (rhabdomyosarcoma) (FOXO1A), mRNA gb|AF032885.1|AF032885 Homo sapiens forkhead protein (FKHR) mRNA, complete cds Length = 5723 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 688 ggccgcggcggccgccgccgc 668
>gb|L10720.1|BPETOXOP Bordetella pertussis toxin liberation operon Length = 9342 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 4287 ggccgcggcggccgccgccgc 4307
>gb|U02310.1|HSU02310 Human fork head domain protein (FKHR) mRNA, complete cds Length = 3421 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggccgcggcggccgccgccgc 613 ||||||||||||||||||||| Sbjct: 309 ggccgcggcggccgccgccgc 289 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 128,940,428 Number of extensions: 7190953 Number of successful extensions: 191003 Number of sequences better than 10.0: 93 Number of HSP's gapped: 191003 Number of HSP's successfully gapped: 98 Length of query: 894 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 871 Effective length of database: 18,503,978,556 Effective search space: 16116965322276 Effective search space used: 16116965322276 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)