ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf19k01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK060072:Os01g0663500 | 202 | 3e-52 | 2 | AK058452:Os01g0663500 | 202 | 3e-52 | 3 | AK104306:Os01g0174300 | 43 | 3e-04 | 4 | AK071324:Os01g0174300 | 43 | 3e-04 | 5 | AK108011:Os11g0703000 | 32 | 0.60 | 6 | Os12g0456400:Os12g0456400 | 29 | 5.1 | 7 | Os02g0631500:Os02g0631500 | 28 | 6.6 | 8 | AK063250:Os12g0275500 | 28 | 6.6 | 9 | Os05g0502000:Os05g0502000 | 28 | 8.6 | 10 | AK109253: | 28 | 8.6 | 11 | AK106678:Os11g0702000 | 28 | 8.6 | 12 | AK104327:Os04g0485000 | 28 | 8.6 | 13 | AK068887:Os04g0485000 | 28 | 8.6 | 14 | AK066551:Os05g0526800 | 28 | 8.6 | 15 | AB037149:Os04g0485000 | 28 | 8.6 |
|---|
>AK060072:Os01g0663500 | Length = 190 Score = 202 bits (514), Expect = 3e-52 Identities = 95/108 (87%), Positives = 99/108 (91%) Frame = +1 Query: 217 ELSEKSCIPCNSMDLHAMSEDSAKKSLEQVTGWELKNEGDILKLHRAWKVKNFVKGLEFF 396 EL++K C+PCNS D+HAM EDSAKK LEQV GWEL EGDILKLHRAWKVKNFVKGLEF Sbjct: 67 ELAKKICVPCNSKDIHAMPEDSAKKMLEQVGGWELATEGDILKLHRAWKVKNFVKGLEFL 126 Query: 397 QLVAAVAEEEGHHPDLHLVSWNNVKIDVWTHSVRGLTDNDFILAAKIN 540 QLVAAVAEEEGHHPDLHLV WNNVKIDVWTHSVRGLTDNDFILAAKIN Sbjct: 127 QLVAAVAEEEGHHPDLHLVGWNNVKIDVWTHSVRGLTDNDFILAAKIN 174
>AK058452:Os01g0663500 | Length = 190 Score = 202 bits (514), Expect = 3e-52 Identities = 95/108 (87%), Positives = 99/108 (91%) Frame = +1 Query: 217 ELSEKSCIPCNSMDLHAMSEDSAKKSLEQVTGWELKNEGDILKLHRAWKVKNFVKGLEFF 396 EL++K C+PCNS D+HAM EDSAKK LEQV GWEL EGDILKLHRAWKVKNFVKGLEF Sbjct: 67 ELAKKICVPCNSKDIHAMPEDSAKKMLEQVGGWELATEGDILKLHRAWKVKNFVKGLEFL 126 Query: 397 QLVAAVAEEEGHHPDLHLVSWNNVKIDVWTHSVRGLTDNDFILAAKIN 540 QLVAAVAEEEGHHPDLHLV WNNVKIDVWTHSVRGLTDNDFILAAKIN Sbjct: 127 QLVAAVAEEEGHHPDLHLVGWNNVKIDVWTHSVRGLTDNDFILAAKIN 174
>AK104306:Os01g0174300 | Length = 311 Score = 43.1 bits (100), Expect = 3e-04 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 15/95 (15%) Frame = +1 Query: 61 MAGLLLRRFMRI-QPRAPMTAA----GGAAFFNASCPSSPRTVAHLEVSGEQASPKV--- 216 MA LLLRR + R P+ AA GGAA F C SSP T+A +E GE A+ KV Sbjct: 1 MAALLLRRLAGTHRGRVPLAAAAAVTGGAALF---CASSPPTIALMEEKGEDAAAKVALN 57 Query: 217 -------ELSEKSCIPCNSMDLHAMSEDSAKKSLE 300 +L EK+ + NS + S K L+ Sbjct: 58 PDKWLEFKLQEKATVSHNSQLFRFSFDPSTKLGLD 92
>AK071324:Os01g0174300 | Length = 311 Score = 43.1 bits (100), Expect = 3e-04 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 15/95 (15%) Frame = +1 Query: 61 MAGLLLRRFMRI-QPRAPMTAA----GGAAFFNASCPSSPRTVAHLEVSGEQASPKV--- 216 MA LLLRR + R P+ AA GGAA F C SSP T+A +E GE A+ KV Sbjct: 1 MAALLLRRLAGTHRGRVPLAAAAAVTGGAALF---CASSPPTIALMEEKGEDAAAKVALN 57 Query: 217 -------ELSEKSCIPCNSMDLHAMSEDSAKKSLE 300 +L EK+ + NS + S K L+ Sbjct: 58 PDKWLEFKLQEKATVSHNSQLFRFSFDPSTKLGLD 92
>AK108011:Os11g0703000 | Length = 212 Score = 32.0 bits (71), Expect = 0.60 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = +1 Query: 103 RAPMTAAGGAAFFNASCPSSPRTVAHLEVSGEQASPKVELSEKSCIPCNSMDLH 264 R AAG A F A CP + T +EV+ ++ EL C P N H Sbjct: 159 RGGCMAAGQAEAFKARCPDTRTTPTDVEVTPQRCIQPAELKVVFCPPDNXSSTH 212
>Os12g0456400:Os12g0456400 | Length = 1142 Score = 28.9 bits (63), Expect = 5.1 Identities = 19/52 (36%), Positives = 22/52 (42%) Frame = +3 Query: 45 PQRPQHGGSATA*VHADPAPCADDRRRWSRVLQRLVPLVPPHRRAPGGERGA 200 P RP G S+ A P A R + + L P PPHRR RGA Sbjct: 59 PLRPPRGSSSPGYSFASPKTLALRERA---IPETLTPPSPPHRRRHMASRGA 107
>Os02g0631500:Os02g0631500 | Length = 1190 Score = 28.5 bits (62), Expect = 6.6 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -1 Query: 353 LCNFKMSPS-FFSSQPVTCSSDFLAESSDIACRSIELHGIQLFSDNST 213 LC FK++P+ S +C DF + D+AC +E G L+ T Sbjct: 574 LCKFKIAPAALVFSCLKSCLDDFSHHNIDVACNLLETCGRFLYRSPET 621
>AK063250:Os12g0275500 | Length = 155 Score = 28.5 bits (62), Expect = 6.6 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = -1 Query: 182 RCATVRGDEGHEALKNAAPPAAVIGARGWIRMNLRSSRPAMLRPLRASGAGTD 24 +C +RG EGH+ ++A G+ G L++ RPA PLR+S G + Sbjct: 3 QCPFLRGGEGHDRSRSAG------GSDG-----LQARRPARAAPLRSSLMGME 44
>Os05g0502000:Os05g0502000 | Length = 691 Score = 28.1 bits (61), Expect = 8.6 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +3 Query: 12 SSASVSSGPTGPQR-PQHGGSATA*VHADPAPCADDRRRWSRV 137 S++S SS P G R P+HGG+ V + R+RW R+ Sbjct: 10 STSSSSSSPPGDARGPEHGGTPRGEVSSKRRLVLRRRQRWRRL 52
>AK109253: | Length = 196 Score = 28.1 bits (61), Expect = 8.6 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = -1 Query: 203 ACSPLTSRCATVRGDEG-HEALKNAAPPAAVIGARGWIRMNLRSS 72 ACS SRCAT R + + AP +++ + GW R R S Sbjct: 147 ACSRSRSRCATARCSAAIRRSRPSCAPSSSLARSLGWARRMRRGS 191
>AK106678:Os11g0702000 | Length = 272 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 87 HADPAPCADDRRRWSRVLQRLVPLVPPHRR 176 H DP D RR R+ RL+P+ PHRR Sbjct: 80 HVDPP---DQTRRHRRLAARLLPVHAPHRR 106
>AK104327:Os04g0485000 | Length = 389 Score = 28.1 bits (61), Expect = 8.6 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +1 Query: 256 DLHAMSEDSAKKSLEQVTGWELKNEGDILKLHRAWKVKNFVKGLEFF 396 DL + S D AKK E+ WE KN + + +NF K F Sbjct: 155 DLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATRNFKKAASLF 201
>AK068887:Os04g0485000 | Length = 389 Score = 28.1 bits (61), Expect = 8.6 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +1 Query: 256 DLHAMSEDSAKKSLEQVTGWELKNEGDILKLHRAWKVKNFVKGLEFF 396 DL + S D AKK E+ WE KN + + +NF K F Sbjct: 155 DLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATRNFKKAASLF 201
>AK066551:Os05g0526800 | Length = 480 Score = 28.1 bits (61), Expect = 8.6 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 55 LNMAGLLLRRFMRIQPRAPMTAAGGAAFFNASCPSSPRTVA 177 + +A LLLRR + + P A A FF++S P+ R A Sbjct: 24 VELAKLLLRRGLAVVIAVPTPPASTADFFSSSAPAVDRMAA 64
>AB037149:Os04g0485000 | Length = 389 Score = 28.1 bits (61), Expect = 8.6 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +1 Query: 256 DLHAMSEDSAKKSLEQVTGWELKNEGDILKLHRAWKVKNFVKGLEFF 396 DL + S D AKK E+ WE KN + + +NF K F Sbjct: 155 DLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATRNFKKAASLF 201 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,391,563 Number of extensions: 515267 Number of successful extensions: 1458 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1457 Number of HSP's successfully gapped: 15 Length of query: 297 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 197 Effective length of database: 11,395,755 Effective search space: 2244963735 Effective search space used: 2244963735 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
