ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf19j19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596547.1| Saccharum officinarum clone SCAGLR1043G02, complete sequence Length = 984 Score = 533 bits (269), Expect = e-148 Identities = 457/520 (87%), Gaps = 6/520 (1%) Strand = Plus / Plus Query: 159 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 218 ||||||||||||||||| |||||||| |||| ||||| |||||||| ||||||||||||| Sbjct: 116 taatggcggaggaggggtacaaggtgacgctgaacgtgtacgacctcagcaacggcctcg 175 Query: 219 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 278 |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 cgcggcagctgtccacctccttcctcggcaagcccatcgaggccatctggcacacgggcg 235 Query: 279 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 338 |||||||||||||||||||||||| |||||| |||||||||||| || |||| |||||| Sbjct: 236 tggtggtgtacgggaacgagtactacttcggcggcgggatccagtcgtcgcccgcgggga 295 Query: 339 cgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcacccacctcccccgcg 398 |||||| |||||| ||||| ||||| || || ||||||||||| ||| |||| |||| Sbjct: 296 cgacgccgtacgggcgcccgctgcggacggtggagctgggcgtcacgcacatcccgcgcg 355 Query: 399 aggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgccgccacatacagcc 458 |||| ||||||||||||||||||||||||||||| || ||||| |||| || ||| ||| Sbjct: 356 aggtgttcgaggactacctccgcgacatcgcgccccggtacacggccgagacctaccgcc 415 Query: 459 tgctcacccacaactgcaacaacttcaccaacgaggtcgcgcagttcctcgt------cg 512 ||||||||||||||||||||||||||| | ||||||| |||||||||||||| || Sbjct: 416 tgctcacccacaactgcaacaacttcagccacgaggtggcgcagttcctcgtcggcaccg 475 Query: 513 gcgccgggataccggactacatcctcaacctgcccaacgaggtcctgtccagccccatgg 572 ||||||| | || ||||||||||||||||| ||| ||||||| ||||||||||||||| Sbjct: 476 gcgccggcgtgcccgactacatcctcaacctccccgccgaggtcatgtccagccccatgg 535 Query: 573 gcgccatgatcatgcccatgatccagaacctcgaggccacgctccggaacaacgccgcgc 632 || | | ||||||||||||||||||||||||||| |||||||||||| |||| ||||| Sbjct: 536 gcccgctcatcatgcccatgatccagaacctcgagtccacgctccggagcaacaacgcgc 595 Query: 633 cccagaccacgcagttcgtgcccactccggcatccgtctc 672 | ||| ||||||||||||||||||| || ||||||||||| Sbjct: 596 cgcaggccacgcagttcgtgcccacgcccgcatccgtctc 635 Score = 135 bits (68), Expect = 4e-28 Identities = 128/148 (86%) Strand = Plus / Plus Query: 842 gctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgcg 901 |||||||| ||||| ||||| ||||| ||||||||||| ||||||||||| ||||| ||| Sbjct: 748 gctgacccgctcgggagcgccaggggaaaggtgcaggaggaggtgatgagggagttcgcg 807 Query: 902 gcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccgt 961 | ||||||| || |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 808 ggcatcatggccagcggcacgcttggggccagcgaggcggcggcgctggccatgcgccgg 867 Query: 962 gttatggagcgccacggcgacggcgcca 989 || ||||||||||| |||||| |||||| Sbjct: 868 gtcatggagcgccatggcgaccgcgcca 895
>emb|CT830358.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA031L22, full insert sequence Length = 1251 Score = 486 bits (245), Expect = e-134 Identities = 431/493 (87%) Strand = Plus / Plus Query: 159 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 218 ||||||||||||| ||| ||||||| | || ||||| |||||||| ||||||||||||| Sbjct: 186 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 245 Query: 219 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 278 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 246 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 305 Query: 279 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 338 ||||||||||||||||||||||||||||||| |||||||||||| || | |||||||| Sbjct: 306 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 365 Query: 339 cgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcacccacctcccccgcg 398 ||||| |||||| || || |||||||| || || |||||| || ||| |||| || | Sbjct: 366 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 425 Query: 399 aggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgccgccacatacagcc 458 |||| |||||||||||||||||||||||| ||||||| ||||| || | || ||| | | Sbjct: 426 aggtgttcgaggactacctccgcgacatctcgccgcggtacacggcggagacgtaccggc 485 Query: 459 tgctcacccacaactgcaacaacttcaccaacgaggtcgcgcagttcctcgtcggcgccg 518 |||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 486 tgctcagccacaactgcaacaacttcagcaacgaggtggcgcaattcctcgtcggcgccg 545 Query: 519 ggataccggactacatcctcaacctgcccaacgaggtcctgtccagccccatgggcgcca 578 | || || ||||||||||||||||| ||| ||||||| ||||||||||||||||| || Sbjct: 546 gcatccccgactacatcctcaacctccccgccgaggtcatgtccagccccatgggccccc 605 Query: 579 tgatcatgcccatgatccagaacctcgaggccacgctccggaacaacgccgcgccccaga 638 | |||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||| Sbjct: 606 tcatcatgcccatgattcagaacctcgagtccacgctccggaccaacgccgcgccgcagg 665 Query: 639 ccacgcagttcgt 651 ||||||||||||| Sbjct: 666 ccacgcagttcgt 678 Score = 157 bits (79), Expect = 1e-34 Identities = 127/143 (88%) Strand = Plus / Plus Query: 841 ggctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgc 900 ||||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||| || Sbjct: 785 ggctgacccgctcggcggcgcgagggggaaggtgcaggaggaggtgatgcgggagttcgc 844 Query: 901 ggcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccg 960 |||| |||||||||| || |||||||||||| ||||||||||||||||||| ||||| || Sbjct: 845 ggcgatcatggcgagcgggacgctgcgggcgagcgaggcggcggcgctggcgatgcggcg 904 Query: 961 tgttatggagcgccacggcgacg 983 || |||||||| |||||||||| Sbjct: 905 ggtcatggagcggcacggcgacg 927
>ref|NM_001055023.1| Oryza sativa (japonica cultivar-group) Os02g0814000 (Os02g0814000) mRNA, complete cds Length = 1218 Score = 486 bits (245), Expect = e-134 Identities = 431/493 (87%) Strand = Plus / Plus Query: 159 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 218 ||||||||||||| ||| ||||||| | || ||||| |||||||| ||||||||||||| Sbjct: 154 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 213 Query: 219 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 278 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 214 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 273 Query: 279 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 338 ||||||||||||||||||||||||||||||| |||||||||||| || | |||||||| Sbjct: 274 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 333 Query: 339 cgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcacccacctcccccgcg 398 ||||| |||||| || || |||||||| || || |||||| || ||| |||| || | Sbjct: 334 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 393 Query: 399 aggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgccgccacatacagcc 458 |||| |||||||||||||||||||||||| ||||||| ||||| || | || ||| | | Sbjct: 394 aggtgttcgaggactacctccgcgacatctcgccgcggtacacggcggagacgtaccggc 453 Query: 459 tgctcacccacaactgcaacaacttcaccaacgaggtcgcgcagttcctcgtcggcgccg 518 |||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 454 tgctcagccacaactgcaacaacttcagcaacgaggtggcgcaattcctcgtcggcgccg 513 Query: 519 ggataccggactacatcctcaacctgcccaacgaggtcctgtccagccccatgggcgcca 578 | || || ||||||||||||||||| ||| ||||||| ||||||||||||||||| || Sbjct: 514 gcatccccgactacatcctcaacctccccgccgaggtcatgtccagccccatgggccccc 573 Query: 579 tgatcatgcccatgatccagaacctcgaggccacgctccggaacaacgccgcgccccaga 638 | |||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||| Sbjct: 574 tcatcatgcccatgattcagaacctcgagtccacgctccggaccaacgccgcgccgcagg 633 Query: 639 ccacgcagttcgt 651 ||||||||||||| Sbjct: 634 ccacgcagttcgt 646 Score = 149 bits (75), Expect = 2e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 841 ggctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgc 900 ||||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||| || Sbjct: 752 ggctgacccgctcggcggcgcgagggggaaggtgcaggaggaggtgatgcgggagttcgc 811 Query: 901 ggcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccg 960 |||| |||||||||| || |||||||||||| ||||||||||||||||||| ||||| || Sbjct: 812 ggcgatcatggcgagcgggacgctgcgggcgagcgaggcggcggcgctggcgatgcggcg 871 Query: 961 tgttatggagcgccacggc 979 || |||||||| |||||| Sbjct: 872 ggtcatggagcggcacggc 890
>dbj|AK104442.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B11, full insert sequence Length = 1151 Score = 486 bits (245), Expect = e-134 Identities = 431/493 (87%) Strand = Plus / Plus Query: 159 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 218 ||||||||||||| ||| ||||||| | || ||||| |||||||| ||||||||||||| Sbjct: 129 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 188 Query: 219 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 278 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 189 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 248 Query: 279 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 338 ||||||||||||||||||||||||||||||| |||||||||||| || | |||||||| Sbjct: 249 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 308 Query: 339 cgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcacccacctcccccgcg 398 ||||| |||||| || || |||||||| || || |||||| || ||| |||| || | Sbjct: 309 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 368 Query: 399 aggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgccgccacatacagcc 458 |||| |||||||||||||||||||||||| ||||||| ||||| || | || ||| | | Sbjct: 369 aggtgttcgaggactacctccgcgacatctcgccgcggtacacggcggagacgtaccggc 428 Query: 459 tgctcacccacaactgcaacaacttcaccaacgaggtcgcgcagttcctcgtcggcgccg 518 |||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 429 tgctcagccacaactgcaacaacttcagcaacgaggtggcgcaattcctcgtcggcgccg 488 Query: 519 ggataccggactacatcctcaacctgcccaacgaggtcctgtccagccccatgggcgcca 578 | || || ||||||||||||||||| ||| ||||||| ||||||||||||||||| || Sbjct: 489 gcatccccgactacatcctcaacctccccgccgaggtcatgtccagccccatgggccccc 548 Query: 579 tgatcatgcccatgatccagaacctcgaggccacgctccggaacaacgccgcgccccaga 638 | |||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||| Sbjct: 549 tcatcatgcccatgattcagaacctcgagtccacgctccggaccaacgccgcgccgcagg 608 Query: 639 ccacgcagttcgt 651 ||||||||||||| Sbjct: 609 ccacgcagttcgt 621 Score = 149 bits (75), Expect = 2e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 841 ggctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgc 900 ||||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||| || Sbjct: 727 ggctgacccgctcggcggcgcgagggggaaggtgcaggaggaggtgatgcgggagttcgc 786 Query: 901 ggcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccg 960 |||| |||||||||| || |||||||||||| ||||||||||||||||||| ||||| || Sbjct: 787 ggcgatcatggcgagcgggacgctgcgggcgagcgaggcggcggcgctggcgatgcggcg 846 Query: 961 tgttatggagcgccacggc 979 || |||||||| |||||| Sbjct: 847 ggtcatggagcggcacggc 865
>dbj|AK102943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114L12, full insert sequence Length = 1099 Score = 486 bits (245), Expect = e-134 Identities = 431/493 (87%) Strand = Plus / Plus Query: 159 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 218 ||||||||||||| ||| ||||||| | || ||||| |||||||| ||||||||||||| Sbjct: 151 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 210 Query: 219 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 278 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 211 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 270 Query: 279 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 338 ||||||||||||||||||||||||||||||| |||||||||||| || | |||||||| Sbjct: 271 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 330 Query: 339 cgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcacccacctcccccgcg 398 ||||| |||||| || || |||||||| || || |||||| || ||| |||| || | Sbjct: 331 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 390 Query: 399 aggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgccgccacatacagcc 458 |||| |||||||||||||||||||||||| ||||||| ||||| || | || ||| | | Sbjct: 391 aggtgttcgaggactacctccgcgacatctcgccgcggtacacggcggagacgtaccggc 450 Query: 459 tgctcacccacaactgcaacaacttcaccaacgaggtcgcgcagttcctcgtcggcgccg 518 |||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 451 tgctcagccacaactgcaacaacttcagcaacgaggtggcgcaattcctcgtcggcgccg 510 Query: 519 ggataccggactacatcctcaacctgcccaacgaggtcctgtccagccccatgggcgcca 578 | || || ||||||||||||||||| ||| ||||||| ||||||||||||||||| || Sbjct: 511 gcatccccgactacatcctcaacctccccgccgaggtcatgtccagccccatgggccccc 570 Query: 579 tgatcatgcccatgatccagaacctcgaggccacgctccggaacaacgccgcgccccaga 638 | |||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||| Sbjct: 571 tcatcatgcccatgattcagaacctcgagtccacgctccggaccaacgccgcgccgcagg 630 Query: 639 ccacgcagttcgt 651 ||||||||||||| Sbjct: 631 ccacgcagttcgt 643 Score = 149 bits (75), Expect = 2e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 841 ggctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgc 900 ||||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||| || Sbjct: 749 ggctgacccgctcggcggcgcgagggggaaggtgcaggaggaggtgatgcgggagttcgc 808 Query: 901 ggcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccg 960 |||| |||||||||| || |||||||||||| ||||||||||||||||||| ||||| || Sbjct: 809 ggcgatcatggcgagcgggacgctgcgggcgagcgaggcggcggcgctggcgatgcggcg 868 Query: 961 tgttatggagcgccacggc 979 || |||||||| |||||| Sbjct: 869 ggtcatggagcggcacggc 887
>dbj|AK060071.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A06, full insert sequence Length = 1218 Score = 486 bits (245), Expect = e-134 Identities = 431/493 (87%) Strand = Plus / Plus Query: 159 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 218 ||||||||||||| ||| ||||||| | || ||||| |||||||| ||||||||||||| Sbjct: 154 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 213 Query: 219 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 278 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 214 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 273 Query: 279 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 338 ||||||||||||||||||||||||||||||| |||||||||||| || | |||||||| Sbjct: 274 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 333 Query: 339 cgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcacccacctcccccgcg 398 ||||| |||||| || || |||||||| || || |||||| || ||| |||| || | Sbjct: 334 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 393 Query: 399 aggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgccgccacatacagcc 458 |||| |||||||||||||||||||||||| ||||||| ||||| || | || ||| | | Sbjct: 394 aggtgttcgaggactacctccgcgacatctcgccgcggtacacggcggagacgtaccggc 453 Query: 459 tgctcacccacaactgcaacaacttcaccaacgaggtcgcgcagttcctcgtcggcgccg 518 |||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 454 tgctcagccacaactgcaacaacttcagcaacgaggtggcgcaattcctcgtcggcgccg 513 Query: 519 ggataccggactacatcctcaacctgcccaacgaggtcctgtccagccccatgggcgcca 578 | || || ||||||||||||||||| ||| ||||||| ||||||||||||||||| || Sbjct: 514 gcatccccgactacatcctcaacctccccgccgaggtcatgtccagccccatgggccccc 573 Query: 579 tgatcatgcccatgatccagaacctcgaggccacgctccggaacaacgccgcgccccaga 638 | |||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||| Sbjct: 574 tcatcatgcccatgattcagaacctcgagtccacgctccggaccaacgccgcgccgcagg 633 Query: 639 ccacgcagttcgt 651 ||||||||||||| Sbjct: 634 ccacgcagttcgt 646 Score = 149 bits (75), Expect = 2e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 841 ggctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgc 900 ||||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||| || Sbjct: 752 ggctgacccgctcggcggcgcgagggggaaggtgcaggaggaggtgatgcgggagttcgc 811 Query: 901 ggcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccg 960 |||| |||||||||| || |||||||||||| ||||||||||||||||||| ||||| || Sbjct: 812 ggcgatcatggcgagcgggacgctgcgggcgagcgaggcggcggcgctggcgatgcggcg 871 Query: 961 tgttatggagcgccacggc 979 || |||||||| |||||| Sbjct: 872 ggtcatggagcggcacggc 890
>dbj|AK242464.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080301H18, full insert sequence Length = 2221 Score = 478 bits (241), Expect = e-131 Identities = 430/493 (87%) Strand = Plus / Minus Query: 159 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 218 ||||||||||||| ||| ||||||| | || ||||| |||||||| ||||||||||||| Sbjct: 1337 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 1278 Query: 219 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 278 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 1277 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 1218 Query: 279 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 338 ||||||||||||||||||||||||||||||| |||||||||||| || | ||||||| Sbjct: 1217 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctgggggcgggga 1158 Query: 339 cgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcacccacctcccccgcg 398 ||||| |||||| || || |||||||| || || |||||| || ||| |||| || | Sbjct: 1157 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 1098 Query: 399 aggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgccgccacatacagcc 458 |||| |||||||||||||||||||||||| ||||||| ||||| || | || ||| | | Sbjct: 1097 aggtgttcgaggactacctccgcgacatctcgccgcggtacacggcggagacgtaccggc 1038 Query: 459 tgctcacccacaactgcaacaacttcaccaacgaggtcgcgcagttcctcgtcggcgccg 518 |||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 1037 tgctcagccacaactgcaacaacttcagcaacgaggtggcgcaattcctcgtcggcgccg 978 Query: 519 ggataccggactacatcctcaacctgcccaacgaggtcctgtccagccccatgggcgcca 578 | || || ||||||||||||||||| ||| ||||||| ||||||||||||||||| || Sbjct: 977 gcatccccgactacatcctcaacctccccgccgaggtcatgtccagccccatgggccccc 918 Query: 579 tgatcatgcccatgatccagaacctcgaggccacgctccggaacaacgccgcgccccaga 638 | |||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||| Sbjct: 917 tcatcatgcccatgattcagaacctcgagtccacgctccggaccaacgccgcgccgcagg 858 Query: 639 ccacgcagttcgt 651 ||||||||||||| Sbjct: 857 ccacgcagttcgt 845 Score = 149 bits (75), Expect = 2e-32 Identities = 123/139 (88%) Strand = Plus / Minus Query: 841 ggctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgc 900 ||||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||| || Sbjct: 739 ggctgacccgctcggcggcgcgagggggaaggtgcaggaggaggtgatgcgggagttcgc 680 Query: 901 ggcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccg 960 |||| |||||||||| || |||||||||||| ||||||||||||||||||| ||||| || Sbjct: 679 ggcgatcatggcgagcgggacgctgcgggcgagcgaggcggcggcgctggcgatgcggcg 620 Query: 961 tgttatggagcgccacggc 979 || |||||||| |||||| Sbjct: 619 ggtcatggagcggcacggc 601
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 359 bits (181), Expect = 1e-95 Identities = 334/385 (86%) Strand = Plus / Minus Query: 267 ggcacacgggcgtggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcgg 326 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 34899035 ggcatacgggcgtggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgc 34898976 Query: 327 cgccggcgggggcgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcaccc 386 | |||||||| ||||| |||||| || || |||||||| || || |||||| || | Sbjct: 34898975 tggcggcggggaggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgc 34898916 Query: 387 acctcccccgcgaggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgccg 446 || |||| || ||||| |||||||||||||||||||||||| ||||||| ||||| || | Sbjct: 34898915 acatcccgcgggaggtgttcgaggactacctccgcgacatctcgccgcggtacacggcgg 34898856 Query: 447 ccacatacagcctgctcacccacaactgcaacaacttcaccaacgaggtcgcgcagttcc 506 || ||| | ||||||| |||||||||||||||||||| ||||||||| ||||| |||| Sbjct: 34898855 agacgtaccggctgctcagccacaactgcaacaacttcagcaacgaggtggcgcaattcc 34898796 Query: 507 tcgtcggcgccgggataccggactacatcctcaacctgcccaacgaggtcctgtccagcc 566 ||||||||||||| || || ||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 34898795 tcgtcggcgccggcatccccgactacatcctcaacctccccgccgaggtcatgtccagcc 34898736 Query: 567 ccatgggcgccatgatcatgcccatgatccagaacctcgaggccacgctccggaacaacg 626 |||||||| || | |||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 34898735 ccatgggccccctcatcatgcccatgattcagaacctcgagtccacgctccggaccaacg 34898676 Query: 627 ccgcgccccagaccacgcagttcgt 651 ||||||| ||| ||||||||||||| Sbjct: 34898675 ccgcgccgcaggccacgcagttcgt 34898651 Score = 149 bits (75), Expect = 2e-32 Identities = 123/139 (88%) Strand = Plus / Minus Query: 841 ggctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgc 900 ||||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||| || Sbjct: 34898545 ggctgacccgctcggcggcgcgagggggaaggtgcaggaggaggtgatgcgggagttcgc 34898486 Query: 901 ggcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccg 960 |||| |||||||||| || |||||||||||| ||||||||||||||||||| ||||| || Sbjct: 34898485 ggcgatcatggcgagcgggacgctgcgggcgagcgaggcggcggcgctggcgatgcggcg 34898426 Query: 961 tgttatggagcgccacggc 979 || |||||||| |||||| Sbjct: 34898425 ggtcatggagcggcacggc 34898407 Score = 115 bits (58), Expect = 3e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 191 aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 250 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 34899199 aacgtgtacgacctcagcaacggcctcgcgcggcagctctccacctccttcctcggcaag 34899140 Query: 251 cccatcgaggccatctgg 268 || ||||||||||||||| Sbjct: 34899139 ccaatcgaggccatctgg 34899122 Score = 107 bits (54), Expect = 8e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 191 aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 250 ||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||| Sbjct: 33509375 aacgtgtacgacctgagcaacagcctcgcgcggcagctctccacctccttcctccgcaag 33509316 Query: 251 cccatcgaggccatctgg 268 || ||||||||||||||| Sbjct: 33509315 ccaatcgaggccatctgg 33509298 Score = 75.8 bits (38), Expect = 3e-10 Identities = 125/154 (81%) Strand = Plus / Minus Query: 267 ggcacacgggcgtggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcgg 326 |||| ||||||||| |||||||||||||| ||||||| | ||| |||||||||||| || Sbjct: 33509204 ggcatacgggcgtgctggtgtacgggaacaagtacttgtacggcggcgggatccagtcgc 33509145 Query: 327 cgccggcgggggcgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcaccc 386 ||||| |||| ||| | |||||| || || |||||||| || || | |||||| || | Sbjct: 33509144 tgccggtggggaggacaccgtacgggcggccggtgcgggtggtggagccgggcgtgacgc 33509085 Query: 387 acctcccccgcgaggtcttcgaggactacctccg 420 || |||| || |||| |||||||||| |||||| Sbjct: 33509084 acatcccacgttaggtgttcgaggacttcctccg 33509051 Score = 44.1 bits (22), Expect = 1.1 Identities = 77/94 (81%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 479 aacttcaccaacgaggtcgcgcagttcctcgtcggcgccgggataccggactacatcctc 538 ||||||| ||||||| | ||||| |||||||||||||||| | | ||||||| |||| Sbjct: 33509046 aacttcagcaacgag-tggcgcaactcctcgtcggcgccggcaccaccgactacaccctc 33508988 Query: 539 aacctgcccaacgaggtcctgtccagccccatgg 572 ||||| ||| |||||| ||||||| ||||||| Sbjct: 33508987 aacctccccggcgaggtgatgtccagacccatgg 33508954
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 359 bits (181), Expect = 1e-95 Identities = 334/385 (86%) Strand = Plus / Minus Query: 267 ggcacacgggcgtggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcgg 326 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 120630 ggcatacgggcgtggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgc 120571 Query: 327 cgccggcgggggcgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcaccc 386 | |||||||| ||||| |||||| || || |||||||| || || |||||| || | Sbjct: 120570 tggcggcggggaggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgc 120511 Query: 387 acctcccccgcgaggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgccg 446 || |||| || ||||| |||||||||||||||||||||||| ||||||| ||||| || | Sbjct: 120510 acatcccgcgggaggtgttcgaggactacctccgcgacatctcgccgcggtacacggcgg 120451 Query: 447 ccacatacagcctgctcacccacaactgcaacaacttcaccaacgaggtcgcgcagttcc 506 || ||| | ||||||| |||||||||||||||||||| ||||||||| ||||| |||| Sbjct: 120450 agacgtaccggctgctcagccacaactgcaacaacttcagcaacgaggtggcgcaattcc 120391 Query: 507 tcgtcggcgccgggataccggactacatcctcaacctgcccaacgaggtcctgtccagcc 566 ||||||||||||| || || ||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 120390 tcgtcggcgccggcatccccgactacatcctcaacctccccgccgaggtcatgtccagcc 120331 Query: 567 ccatgggcgccatgatcatgcccatgatccagaacctcgaggccacgctccggaacaacg 626 |||||||| || | |||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 120330 ccatgggccccctcatcatgcccatgattcagaacctcgagtccacgctccggaccaacg 120271 Query: 627 ccgcgccccagaccacgcagttcgt 651 ||||||| ||| ||||||||||||| Sbjct: 120270 ccgcgccgcaggccacgcagttcgt 120246 Score = 149 bits (75), Expect = 2e-32 Identities = 123/139 (88%) Strand = Plus / Minus Query: 841 ggctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgc 900 ||||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||| || Sbjct: 120140 ggctgacccgctcggcggcgcgagggggaaggtgcaggaggaggtgatgcgggagttcgc 120081 Query: 901 ggcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccg 960 |||| |||||||||| || |||||||||||| ||||||||||||||||||| ||||| || Sbjct: 120080 ggcgatcatggcgagcgggacgctgcgggcgagcgaggcggcggcgctggcgatgcggcg 120021 Query: 961 tgttatggagcgccacggc 979 || |||||||| |||||| Sbjct: 120020 ggtcatggagcggcacggc 120002 Score = 115 bits (58), Expect = 3e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 191 aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 250 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 120794 aacgtgtacgacctcagcaacggcctcgcgcggcagctctccacctccttcctcggcaag 120735 Query: 251 cccatcgaggccatctgg 268 || ||||||||||||||| Sbjct: 120734 ccaatcgaggccatctgg 120717
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 359 bits (181), Expect = 1e-95 Identities = 334/385 (86%) Strand = Plus / Minus Query: 267 ggcacacgggcgtggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcgg 326 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 58532 ggcatacgggcgtggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgc 58473 Query: 327 cgccggcgggggcgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcaccc 386 | |||||||| ||||| |||||| || || |||||||| || || |||||| || | Sbjct: 58472 tggcggcggggaggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgc 58413 Query: 387 acctcccccgcgaggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgccg 446 || |||| || ||||| |||||||||||||||||||||||| ||||||| ||||| || | Sbjct: 58412 acatcccgcgggaggtgttcgaggactacctccgcgacatctcgccgcggtacacggcgg 58353 Query: 447 ccacatacagcctgctcacccacaactgcaacaacttcaccaacgaggtcgcgcagttcc 506 || ||| | ||||||| |||||||||||||||||||| ||||||||| ||||| |||| Sbjct: 58352 agacgtaccggctgctcagccacaactgcaacaacttcagcaacgaggtggcgcaattcc 58293 Query: 507 tcgtcggcgccgggataccggactacatcctcaacctgcccaacgaggtcctgtccagcc 566 ||||||||||||| || || ||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 58292 tcgtcggcgccggcatccccgactacatcctcaacctccccgccgaggtcatgtccagcc 58233 Query: 567 ccatgggcgccatgatcatgcccatgatccagaacctcgaggccacgctccggaacaacg 626 |||||||| || | |||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 58232 ccatgggccccctcatcatgcccatgattcagaacctcgagtccacgctccggaccaacg 58173 Query: 627 ccgcgccccagaccacgcagttcgt 651 ||||||| ||| ||||||||||||| Sbjct: 58172 ccgcgccgcaggccacgcagttcgt 58148 Score = 149 bits (75), Expect = 2e-32 Identities = 123/139 (88%) Strand = Plus / Minus Query: 841 ggctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgc 900 ||||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||| || Sbjct: 58042 ggctgacccgctcggcggcgcgagggggaaggtgcaggaggaggtgatgcgggagttcgc 57983 Query: 901 ggcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccg 960 |||| |||||||||| || |||||||||||| ||||||||||||||||||| ||||| || Sbjct: 57982 ggcgatcatggcgagcgggacgctgcgggcgagcgaggcggcggcgctggcgatgcggcg 57923 Query: 961 tgttatggagcgccacggc 979 || |||||||| |||||| Sbjct: 57922 ggtcatggagcggcacggc 57904 Score = 115 bits (58), Expect = 3e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 191 aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 250 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 58696 aacgtgtacgacctcagcaacggcctcgcgcggcagctctccacctccttcctcggcaag 58637 Query: 251 cccatcgaggccatctgg 268 || ||||||||||||||| Sbjct: 58636 ccaatcgaggccatctgg 58619
>gb|AY107896.1| Zea mays PCO141631 mRNA sequence Length = 541 Score = 145 bits (73), Expect = 4e-31 Identities = 131/149 (87%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 841 ggctgaccctctcggaagcgcgagggggaaggtgcaggaagaggtgatgagagagtttgc 900 ||||||||| ||||| ||||| ||||||||||||||||| |||||||||| ||||| || Sbjct: 134 ggctgacccgctcgggagcgccagggggaaggtgcaggaggaggtgatgaaggagttcgc 193 Query: 901 ggcgctcatggcgagtggcacgctgcgggcgggcgaggcggcggcgctggccatgcgccg 960 ||| ||||||| || || || || ||||| |||||||||||||||||||||||||||| Sbjct: 194 ggccatcatggccagcggtac-ctacgggccagcgaggcggcggcgctggccatgcgccg 252 Query: 961 tgttatggagcgccacggcgacggcgcca 989 || ||||||||||||||||||||||||| Sbjct: 253 ggtcatggagcgccacggcgacggcgcca 281
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 107 bits (54), Expect = 8e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 191 aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 250 ||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||| Sbjct: 84250 aacgtgtacgacctgagcaacagcctcgcgcggcagctctccacctccttcctccgcaag 84191 Query: 251 cccatcgaggccatctgg 268 || ||||||||||||||| Sbjct: 84190 ccaatcgaggccatctgg 84173 Score = 75.8 bits (38), Expect = 3e-10 Identities = 125/154 (81%) Strand = Plus / Minus Query: 267 ggcacacgggcgtggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcgg 326 |||| ||||||||| |||||||||||||| ||||||| | ||| |||||||||||| || Sbjct: 84079 ggcatacgggcgtgctggtgtacgggaacaagtacttgtacggcggcgggatccagtcgc 84020 Query: 327 cgccggcgggggcgacgcagtacggccgccccgtgcgggtcgtcgacctgggcgtcaccc 386 ||||| |||| ||| | |||||| || || |||||||| || || | |||||| || | Sbjct: 84019 tgccggtggggaggacaccgtacgggcggccggtgcgggtggtggagccgggcgtgacgc 83960 Query: 387 acctcccccgcgaggtcttcgaggactacctccg 420 || |||| || |||| |||||||||| |||||| Sbjct: 83959 acatcccacgttaggtgttcgaggacttcctccg 83926 Score = 44.1 bits (22), Expect = 1.1 Identities = 77/94 (81%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 479 aacttcaccaacgaggtcgcgcagttcctcgtcggcgccgggataccggactacatcctc 538 ||||||| ||||||| | ||||| |||||||||||||||| | | ||||||| |||| Sbjct: 83921 aacttcagcaacgag-tggcgcaactcctcgtcggcgccggcaccaccgactacaccctc 83863 Query: 539 aacctgcccaacgaggtcctgtccagccccatgg 572 ||||| ||| |||||| ||||||| ||||||| Sbjct: 83862 aacctccccggcgaggtgatgtccagacccatgg 83829
>ref|NM_001071365.1| Oryza sativa (japonica cultivar-group) Os10g0472400 (Os10g0472400) mRNA, partial cds Length = 1062 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 468 acaactgcaacaacttcaccaacgaggtcgcgcagttcctcgtcgg 513 |||||||||||||||||||||| || | |||||| ||||||||||| Sbjct: 394 acaactgcaacaacttcaccaatgaagccgcgcaattcctcgtcgg 439
>ref|NM_111589.3| Arabidopsis thaliana unknown protein (AT3G07090) mRNA, complete cds Length = 990 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 467 cacaactgcaacaacttcaccaacgaggtcgcgcagtt 504 ||||||||||||||||||| |||||||||||| ||||| Sbjct: 400 cacaactgcaacaacttcagcaacgaggtcgctcagtt 437
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete sequence Length = 99128 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 467 cacaactgcaacaacttcaccaacgaggtcgcgcagtt 504 ||||||||||||||||||| |||||||||||| ||||| Sbjct: 91051 cacaactgcaacaacttcagcaacgaggtcgctcagtt 91088
>gb|AC016827.7|ATAC016827 Arabidopsis thaliana chromosome III BAC F17A9 genomic sequence, complete sequence Length = 90142 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 467 cacaactgcaacaacttcaccaacgaggtcgcgcagtt 504 ||||||||||||||||||| |||||||||||| ||||| Sbjct: 82825 cacaactgcaacaacttcagcaacgaggtcgctcagtt 82788
>gb|AY142656.1| Arabidopsis thaliana unknown protein (At3g07090) mRNA, complete cds Length = 828 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 467 cacaactgcaacaacttcaccaacgaggtcgcgcagtt 504 ||||||||||||||||||| |||||||||||| ||||| Sbjct: 307 cacaactgcaacaacttcagcaacgaggtcgctcagtt 344
>gb|AY065383.1| Arabidopsis thaliana unknown protein (At3g07090) mRNA, complete cds Length = 939 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 467 cacaactgcaacaacttcaccaacgaggtcgcgcagtt 504 ||||||||||||||||||| |||||||||||| ||||| Sbjct: 402 cacaactgcaacaacttcagcaacgaggtcgctcagtt 439
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 468 acaactgcaacaacttcaccaacgaggtcgcgcagttcctcgtcgg 513 |||||||||||||||||||||| || | |||||| ||||||||||| Sbjct: 17031914 acaactgcaacaacttcaccaatgaagccgcgcaattcctcgtcgg 17031959
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 468 acaactgcaacaacttcaccaacgaggtcgcgcagttcctcgtcgg 513 |||||||||||||||||||||| || | |||||| ||||||||||| Sbjct: 72406 acaactgcaacaacttcaccaatgaagccgcgcaattcctcgtcgg 72451
>dbj|AK121929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106J23, full insert sequence Length = 1063 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 468 acaactgcaacaacttcaccaacgaggtcgcgcagttcctcgtcgg 513 |||||||||||||||||||||| || | |||||| ||||||||||| Sbjct: 395 acaactgcaacaacttcaccaatgaagccgcgcaattcctcgtcgg 440
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 50.1 bits (25), Expect = 0.017 Identities = 28/29 (96%) Strand = Plus / Minus Query: 78 cgttcctttccggcggcggcgtcgtcttc 106 ||||||| ||||||||||||||||||||| Sbjct: 25939795 cgttcctctccggcggcggcgtcgtcttc 25939767
>gb|AC160399.6| Mus musculus 6 BAC RP23-218B15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196625 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgctctgt 26 ||||||||||||||||||||||||| Sbjct: 59807 gtctctgtctctgtctctgctctgt 59783
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 50.1 bits (25), Expect = 0.017 Identities = 28/29 (96%) Strand = Plus / Minus Query: 78 cgttcctttccggcggcggcgtcgtcttc 106 ||||||| ||||||||||||||||||||| Sbjct: 94893 cgttcctctccggcggcggcgtcgtcttc 94865
>gb|AC133086.4| Mus musculus BAC clone RP24-110I11 from 6, complete sequence Length = 212696 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctctgt 26 ||||||||||||||||||||||||| Sbjct: 10929 gtctctgtctctgtctctgctctgt 10953
>gb|AC187503.2| Rhesus macaque BAC clone CH250-47H12 from chromosome unknown, complete sequence Length = 146671 Score = 48.1 bits (24), Expect = 0.067 Identities = 24/24 (100%) Strand = Plus / Plus Query: 3 tctctgtctctgtctctgctctgt 26 |||||||||||||||||||||||| Sbjct: 119376 tctctgtctctgtctctgctctgt 119399
>gb|AC170742.3| Sorex araneus clone SA_Ba-580J7, complete sequence Length = 156998 Score = 48.1 bits (24), Expect = 0.067 Identities = 24/24 (100%) Strand = Plus / Minus Query: 3 tctctgtctctgtctctgctctgt 26 |||||||||||||||||||||||| Sbjct: 99231 tctctgtctctgtctctgctctgt 99208
>emb|AL136522.6|CNS01DWA Human chromosome 14 DNA sequence BAC R-144C18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 183650 Score = 48.1 bits (24), Expect = 0.067 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgctctg 25 |||||||||||||||||||||||| Sbjct: 147662 gtctctgtctctgtctctgctctg 147639
>gb|AC187851.2| Pan troglodytes chromosome X clone RP43-41J12 map human ortholog p11.23, complete sequence Length = 187722 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 tctctgtctctgtctctgctctg 25 ||||||||||||||||||||||| Sbjct: 74200 tctctgtctctgtctctgctctg 74178
>gb|AC127683.10| Mus musculus BAC clone RP24-171F12 from chromosome 7, complete sequence Length = 158570 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgctct 24 ||||||||||||||||||||||| Sbjct: 42231 gtctctgtctctgtctctgctct 42209
>dbj|AK088644.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430022E14 product:unclassifiable, full insert sequence Length = 1870 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgctct 24 ||||||||||||||||||||||| Sbjct: 682 gtctctgtctctgtctctgctct 660
>gb|AC109506.21| Mus musculus chromosome 7, clone RP23-344G21, complete sequence Length = 227676 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgctct 24 ||||||||||||||||||||||| Sbjct: 202980 gtctctgtctctgtctctgctct 202958
>gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, complete sequence Length = 204800 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctct 24 ||||||||||||||||||||||| Sbjct: 112873 gtctctgtctctgtctctgctct 112895
>emb|AL845156.5| Mouse DNA sequence from clone RP23-340F21 on chromosome 2, complete sequence Length = 118716 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctct 24 ||||||||||||||||||||||| Sbjct: 17103 gtctctgtctctgtctctgctct 17125
>gb|AC116476.6| Mus musculus chromosome 15, clone RP23-387K7, complete sequence Length = 198541 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 tctgtctctgtctctgctctgt 26 |||||||||||||||||||||| Sbjct: 105212 tctgtctctgtctctgctctgt 105233
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 930 cgggcgaggcggcggcgctggc 951 |||||||||||||||||||||| Sbjct: 888497 cgggcgaggcggcggcgctggc 888518
>gb|AC132935.7| Mus musculus chromosome 15, clone RP24-142P21, complete sequence Length = 140484 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 tctgtctctgtctctgctctgt 26 |||||||||||||||||||||| Sbjct: 135297 tctgtctctgtctctgctctgt 135276
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 925 gcgggcgggcgaggcggcggcg 946 |||||||||||||||||||||| Sbjct: 22625 gcgggcgggcgaggcggcggcg 22646
>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete sequence Length = 221754 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 tctctgtctctgtctctgctct 24 |||||||||||||||||||||| Sbjct: 184976 tctctgtctctgtctctgctct 184955
>gb|AC124766.3| Mus musculus BAC clone RP23-204I12 from 1, complete sequence Length = 196490 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 tctctgtctctgtctctgctct 24 |||||||||||||||||||||| Sbjct: 190698 tctctgtctctgtctctgctct 190719
>gb|AC121865.2| Mus musculus BAC clone RP24-112O1 from 8, complete sequence Length = 178620 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ggtctctgtctctgtctctgct 22 |||||||||||||||||||||| Sbjct: 148694 ggtctctgtctctgtctctgct 148715
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 466 ccacaactgcaacaacttcacc 487 |||||||||||||||||||||| Sbjct: 1361962 ccacaactgcaacaacttcacc 1361941
>gb|AE008747.1| Salmonella typhimurium LT2, section 51 of 220 of the complete genome Length = 23306 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 cctcccagatccgcgcgcgcgt 58 |||||||||||||||||||||| Sbjct: 2759 cctcccagatccgcgcgcgcgt 2738
>gb|AC091960.4| Homo sapiens chromosome 5 clone RP11-450M19, complete sequence Length = 172689 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgctc 23 |||||||||||||||||||||| Sbjct: 71238 gtctctgtctctgtctctgctc 71217
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 925 gcgggcgggcgaggcggcggcg 946 |||||||||||||||||||||| Sbjct: 4725959 gcgggcgggcgaggcggcggcg 4725980
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 925 gcgggcgggcgaggcggcggcg 946 |||||||||||||||||||||| Sbjct: 16523886 gcgggcgggcgaggcggcggcg 16523907
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ccggcggcggcgtcgtcttcttctcc 112 ||||||||||| |||||||||||||| Sbjct: 2400088 ccggcggcggcatcgtcttcttctcc 2400113
>gb|AC008698.6| Homo sapiens chromosome 5 clone CTB-70H11, complete sequence Length = 76487 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctc 23 |||||||||||||||||||||| Sbjct: 1000 gtctctgtctctgtctctgctc 1021
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ccggcggcggcgtcgtcttcttctcc 112 ||||||||||| |||||||||||||| Sbjct: 129138 ccggcggcggcatcgtcttcttctcc 129163
>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1097H10 Length = 159732 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 925 gcgggcgggcgaggcggcggcg 946 |||||||||||||||||||||| Sbjct: 43563 gcgggcgggcgaggcggcggcg 43584
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 37 cctcccagatccgcgcgcgcgt 58 |||||||||||||||||||||| Sbjct: 1826559 cctcccagatccgcgcgcgcgt 1826580
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 37 cctcccagatccgcgcgcgcgt 58 |||||||||||||||||||||| Sbjct: 1900013 cctcccagatccgcgcgcgcgt 1900034
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 cctcccagatccgcgcgcgcgt 58 |||||||||||||||||||||| Sbjct: 1152378 cctcccagatccgcgcgcgcgt 1152357
>gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, complete sequence Length = 176649 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 tctctgtctctgtctctgctct 24 |||||||||||||||||||||| Sbjct: 90179 tctctgtctctgtctctgctct 90200
>emb|X74229.1|RNVCS R.rattus VCS-beta1 mRNA Length = 8239 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 tctctgtctctgtctctgctct 24 |||||||||||||||||||||| Sbjct: 1281 tctctgtctctgtctctgctct 1260
>gb|U55179.1|RNU55179 Rattus norvegicus smooth muscle myosin heavy chain gene, promoter region Length = 1820 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 tctctgtctctgtctctgctct 24 |||||||||||||||||||||| Sbjct: 719 tctctgtctctgtctctgctct 698
>gb|AC139351.4| Mus musculus BAC clone RP24-156K15 from 8, complete sequence Length = 190998 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ggtctctgtctctgtctctgct 22 |||||||||||||||||||||| Sbjct: 16882 ggtctctgtctctgtctctgct 16903
>emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 5/20 Length = 254050 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 cctcccagatccgcgcgcgcgt 58 |||||||||||||||||||||| Sbjct: 27800 cctcccagatccgcgcgcgcgt 27779
>gb|U83321.1|RNU83321 Rattus norvegicus myosin heavy chain gene, promoter region Length = 2425 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 tctctgtctctgtctctgctct 24 |||||||||||||||||||||| Sbjct: 1420 tctctgtctctgtctctgctct 1399
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 496 cgcgcagttcctcgtcggcgccggg 520 |||||||| |||||||||||||||| Sbjct: 2033020 cgcgcagtgcctcgtcggcgccggg 2033044
>gb|AC189107.5| Gallus gallus BAC clone CH261-140C3 from chromosome z, complete sequence Length = 198193 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctctgt 26 |||||||||| |||||||||||||| Sbjct: 150696 gtctctgtctgtgtctctgctctgt 150720
>ref|XM_001189425.1| PREDICTED: Strongylocentrotus purpuratus similar to splicing factor u2af large subunit (LOC588126), partial mRNA Length = 1904 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 161 gtctctgtctctgtctctgct 141
>ref|XM_787826.2| PREDICTED: Strongylocentrotus purpuratus similar to splicing factor u2af large subunit (LOC588126), mRNA Length = 1962 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 171 gtctctgtctctgtctctgct 151
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 818 gccgccgcggcggcgccggct 838 ||||||||||||||||||||| Sbjct: 5282305 gccgccgcggcggcgccggct 5282325
>ref|XM_001215323.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_06145) mRNA, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 cacaactgcaacaacttcacc 487 ||||||||||||||||||||| Sbjct: 235 cacaactgcaacaacttcacc 255
>gb|CP000449.1| Maricaulis maris MCS10, complete genome Length = 3368780 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 cggcgccggcgggggcgacgc 344 ||||||||||||||||||||| Sbjct: 900363 cggcgccggcgggggcgacgc 900343
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 349 cggccgccccgtgcgggtcgtcgac 373 ||||| ||||||||||||||||||| Sbjct: 2487517 cggccaccccgtgcgggtcgtcgac 2487541
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 818 gccgccgcggcggcgccggct 838 ||||||||||||||||||||| Sbjct: 3859248 gccgccgcggcggcgccggct 3859268
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 cgcgccgcgctacaccgccgccaca 451 |||||||||| |||||||||||||| Sbjct: 137553 cgcgccgcgcaacaccgccgccaca 137529
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 932 ggcgaggcggcggcgctggcc 952 ||||||||||||||||||||| Sbjct: 2462059 ggcgaggcggcggcgctggcc 2462039
>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete sequence Length = 197609 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctctgt 26 |||||||||||||||||| |||||| Sbjct: 126364 gtctctgtctctgtctcttctctgt 126388
>gb|AC113302.13| Mus musculus chromosome 5, clone RP23-431M7, complete sequence Length = 201427 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 35618 gtctctgtctctgtctctgct 35598
>gb|DQ217769.1| Vaccinium uliginosum isolate YC 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 761 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 gcgtcacccacctcccccgcg 398 ||||||||||||||||||||| Sbjct: 479 gcgtcacccacctcccccgcg 499
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 900836 gtctctgtctctgtctctgct 900856
>gb|AY526625.1| Prunus avium clone EMPaS09 microsatellite sequence Length = 526 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 825 cggcggcgccggctatggctg 845 ||||||||||||||||||||| Sbjct: 117 cggcggcgccggctatggctg 97
>gb|AC102499.10| Mus musculus chromosome 1, clone RP24-151M13, complete sequence Length = 184760 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 109737 gtctctgtctctgtctctgct 109757
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 496 cgcgcagttcctcgtcggcgccgggatac 524 ||||||| |||||||||||||||||||| Sbjct: 3562433 cgcgcagcgcctcgtcggcgccgggatac 3562405
>gb|AC115719.10| Mus musculus chromosome 18, clone RP24-356J16, complete sequence Length = 177037 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ctctgtctctgtctctgctct 24 ||||||||||||||||||||| Sbjct: 107493 ctctgtctctgtctctgctct 107513
>gb|AC153378.4| Mus musculus 6 BAC RP23-106C18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199980 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tctctgtctctgtctctgctc 23 ||||||||||||||||||||| Sbjct: 78570 tctctgtctctgtctctgctc 78550
>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence Length = 217404 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctctgt 26 ||||||||||||||||||| ||||| Sbjct: 46803 gtctctgtctctgtctctggtctgt 46827
>gb|AC129024.4| Mus musculus BAC clone RP23-436D14 from chromosome 6, complete sequence Length = 202285 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggtctctgtctctgtctctgc 21 ||||||||||||||||||||| Sbjct: 126210 ggtctctgtctctgtctctgc 126230
>gb|AC124189.3| Mus musculus BAC clone RP23-254C8 from 5, complete sequence Length = 150507 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 30466 gtctctgtctctgtctctgct 30486
>gb|AC156941.3| Mus musculus BAC clone RP23-25D8 from chromosome 14, complete sequence Length = 214940 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 125307 gtctctgtctctgtctctgct 125327
>gb|AC157553.10| Mus musculus chromosome 7, clone RP24-68L4, complete sequence Length = 184205 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ggtctctgtctctgtctctgc 21 ||||||||||||||||||||| Sbjct: 69988 ggtctctgtctctgtctctgc 69968
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 932 ggcgaggcggcggcgctggccatgc 956 ||||||||||||||||| ||||||| Sbjct: 2000678 ggcgaggcggcggcgctcgccatgc 2000702
>gb|AC120137.16| Mus musculus chromosome 5, clone RP23-280O16, complete sequence Length = 181464 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctctgt 26 |||||||||||||||||| |||||| Sbjct: 159478 gtctctgtctctgtctcttctctgt 159502
>dbj|AK163448.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230040L10 product:unclassifiable, full insert sequence Length = 2349 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 tctgtctctgtctctgctctgttccgctc 33 |||||||||| ||||||||||||| |||| Sbjct: 1799 tctgtctctggctctgctctgttctgctc 1827
>gb|AF382743.1|AF382742S2 Vaccinium vitis-idaea internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 454 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 gcgtcacccacctcccccgcg 398 ||||||||||||||||||||| Sbjct: 230 gcgtcacccacctcccccgcg 250
>gb|AF382730.1| Vaccinium macrocarpon internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 644 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 gcgtcacccacctcccccgcg 398 ||||||||||||||||||||| Sbjct: 420 gcgtcacccacctcccccgcg 440
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 cgcgccgcgctacaccgccgccaca 451 |||||||||| |||||||||||||| Sbjct: 982354 cgcgccgcgcaacaccgccgccaca 982330
>gb|AC162801.2| Mus musculus BAC clone RP24-65E6 from chromosome 12, complete sequence Length = 225198 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgctctgt 26 |||||||||| |||||||||||||| Sbjct: 139830 gtctctgtctttgtctctgctctgt 139806
>emb|AL022329.9|HS407F11 Human DNA sequence from clone CTA-407F11 on chromosome 22q12 Contains ADRBK2 gene for adrenergic beta receptor kinase 2, the YESP (v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1) pseudogene, ESTs, a ca repeat polymorphism, genomic marker D22S421, STSs, GSSs and two putative CpG Islands, complete sequence Length = 221507 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 ctgtctctgtctctgctctgt 26 ||||||||||||||||||||| Sbjct: 189090 ctgtctctgtctctgctctgt 189110
>gb|AC159007.2| Mus musculus BAC clone RP23-9O3 from chromosome 14, complete sequence Length = 172108 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 12438 gtctctgtctctgtctctgct 12458
>gb|AC124526.6| Mus musculus BAC clone RP23-406P13 from chromosome 18, complete sequence Length = 203854 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 77736 gtctctgtctctgtctctgct 77716
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 932 ggcgaggcggcggcgctggcc 952 ||||||||||||||||||||| Sbjct: 3839531 ggcgaggcggcggcgctggcc 3839551
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 496 cgcgcagttcctcgtcggcgccgggatac 524 ||||||| |||||||||||||||||||| Sbjct: 99865 cgcgcagcgcctcgtcggcgccgggatac 99837
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 496 cgcgcagttcctcgtcggcgccgggatac 524 ||||||| |||||||||||||||||||| Sbjct: 79073 cgcgcagcgcctcgtcggcgccgggatac 79045
>emb|AL669835.9| Mouse DNA sequence from clone RP23-151P20 on chromosome 11, complete sequence Length = 81513 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 8797 gtctctgtctctgtctctgct 8817
>gb|AC004596.2| Homo sapiens chromosome 17, clone CTB-175E5, complete sequence Length = 92000 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 930 cgggcgaggcggcggcgctgg 950 ||||||||||||||||||||| Sbjct: 2254 cgggcgaggcggcggcgctgg 2234
>gb|AC097459.3| Homo sapiens BAC clone RP11-13F20 from 4, complete sequence Length = 161519 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 772 caagcaagaaggagagaagaa 792 ||||||||||||||||||||| Sbjct: 105908 caagcaagaaggagagaagaa 105888
>gb|AY826901.1| Heterocapsa triquetra clone HTLHC3471 chloroplast light harvesting complex protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1087 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 745 tgcggcgccgccgggcggctc 765 ||||||||||||||||||||| Sbjct: 161 tgcggcgccgccgggcggctc 141
>dbj|AP007208.1| Mus musculus molossinus genomic DNA, chromosome 1 clone:MSMg01-275M02, complete sequence Length = 165943 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 123760 gtctctgtctctgtctctgct 123780
>gb|AC116351.2| Homo sapiens chromosome 5 clone RP11-43F13, complete sequence Length = 187289 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tctctgtctctgtctctgctc 23 ||||||||||||||||||||| Sbjct: 186049 tctctgtctctgtctctgctc 186029
>gb|AC114291.2| Homo sapiens chromosome 5 clone CTD-3080P12, complete sequence Length = 202305 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tctctgtctctgtctctgctc 23 ||||||||||||||||||||| Sbjct: 44124 tctctgtctctgtctctgctc 44104
>gb|AC016699.10| Homo sapiens BAC clone RP11-173M4 from 2, complete sequence Length = 54480 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 aggtcttcgaggactacctccgcgacatc 427 |||| ||||||||||||||||||| |||| Sbjct: 6923 aggttttcgaggactacctccgcgccatc 6895
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11, complete sequence Length = 126827 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 cgcgccgcgctacaccgccgccaca 451 |||||||||| |||||||||||||| Sbjct: 2571 cgcgccgcgcaacaccgccgccaca 2547
>ref|XM_954137.1| Neurospora crassa OR74A hypothetical protein (NCU06883.1) partial mRNA Length = 1113 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ggtctctgtctctgtctctgc 21 ||||||||||||||||||||| Sbjct: 397 ggtctctgtctctgtctctgc 377
>dbj|AK062714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-C06, full insert sequence Length = 534 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 85 ttccggcggcggcgtcgtcttcttctcca 113 |||||||||||||||||||| || ||||| Sbjct: 277 ttccggcggcggcgtcgtctcctcctcca 305
>emb|BX649203.1| Mouse DNA sequence from clone RP23-24C12 on chromosome 2, complete sequence Length = 37211 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 3325 gtctctgtctctgtctctgct 3305
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 966 tggagcgccacggcgacggcg 986 ||||||||||||||||||||| Sbjct: 1754528 tggagcgccacggcgacggcg 1754548
>emb|AJ308589.1|HSA308589 Homo sapiens partial UBTF for upstream binding transcription factor, RNA polymerase I, promoter region and exon 1 Length = 2398 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 930 cgggcgaggcggcggcgctgg 950 ||||||||||||||||||||| Sbjct: 2192 cgggcgaggcggcggcgctgg 2172
>gb|AC148987.3| Mus musculus BAC clone RP24-322F4 from 6, complete sequence Length = 222379 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctctgt 26 |||||||||||||||||| |||||| Sbjct: 98548 gtctctgtctctgtctcttctctgt 98572
>emb|CT010497.9| Mouse DNA sequence from clone RP23-239L12 on chromosome 12, complete sequence Length = 189472 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 tctctgtctctgtctctgctctgtt 27 ||||||||| ||||||||||||||| Sbjct: 176236 tctctgtctgtgtctctgctctgtt 176260
>emb|CT030257.7| Mouse DNA sequence from clone RP24-374H2 on chromosome 13, complete sequence Length = 184172 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctctgt 26 ||||||||||||||||||| ||||| Sbjct: 164138 gtctctgtctctgtctctgttctgt 164162
>gb|AC122318.4| Mus musculus BAC clone RP23-306H2 from 16, complete sequence Length = 207909 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgctctgt 26 |||||||||||||||||| |||||| Sbjct: 167110 gtctctgtctctgtctctcctctgt 167086
>gb|AC145211.3| Mus musculus BAC clone RP23-419G4 from 8, complete sequence Length = 191166 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 124726 gtctctgtctctgtctctgct 124706
>gb|AC140305.3| Mus musculus BAC clone RP23-425A11 from 6, complete sequence Length = 190535 Score = 42.1 bits (21), Expect = 4.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctg-ctctgttcc 29 ||||||||||||||||||| ||||||||| Sbjct: 96951 gtctctgtctctgtctctgtctctgttcc 96979
>emb|AL691438.16| Mouse DNA sequence from clone RP23-243L4 on chromosome 4 Contains part of the Astn2 gene for astrotactin 2, complete sequence Length = 197300 Score = 42.1 bits (21), Expect = 4.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctg-ctctgttcc 29 ||||||||||||||||||| ||||||||| Sbjct: 53967 gtctctgtctctgtctctgtctctgttcc 53939
>emb|CT025606.10| Mouse DNA sequence from clone RP24-120D14 on chromosome 12, complete sequence Length = 164251 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 tctctgtctctgtctctgctctgtt 27 ||||||||| ||||||||||||||| Sbjct: 158426 tctctgtctgtgtctctgctctgtt 158402
>gb|AC079445.28| Mus musculus strain C57BL/6J chromosome 5 clone rp23-403l21, complete sequence Length = 189517 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgctctgt 26 |||||||||||||||||| |||||| Sbjct: 57688 gtctctgtctctgtctcttctctgt 57712
>gb|AC170810.2| Mus musculus BAC clone RP23-273L20 from chromosome 14, complete sequence Length = 193636 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 41085 gtctctgtctctgtctctgct 41065
>gb|AC166344.4| Mus musculus BAC clone RP24-63B17 from chromosome 14, complete sequence Length = 224882 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 34112 gtctctgtctctgtctctgct 34092 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 215107 gtctctgtctctgtctctgct 215087
>gb|AC113952.9| Mus musculus chromosome 3, clone RP24-166J20, complete sequence Length = 157006 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtctctgtctctgtctctgct 22 ||||||||||||||||||||| Sbjct: 102395 gtctctgtctctgtctctgct 102415
>emb|AL845165.4| Mouse DNA sequence from clone RP23-281N9 on chromosome 2, complete sequence Length = 112789 Score = 42.1 bits (21), Expect = 4.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 2 gtctctgtctctgtctctg-ctctgttcc 29 ||||||||||||||||||| ||||||||| Sbjct: 7589 gtctctgtctctgtctctgtctctgttcc 7561
>emb|AL672130.14| Mouse DNA sequence from clone RP24-74N4 on chromosome 2, complete sequence Length = 60892 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 tctgtctctgtctctgctctgttccgctc 33 |||||||||| ||||||||||||| |||| Sbjct: 9874 tctgtctctggctctgctctgttctgctc 9902 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 158,111,460 Number of extensions: 10517846 Number of successful extensions: 438368 Number of sequences better than 10.0: 125 Number of HSP's gapped: 438351 Number of HSP's successfully gapped: 145 Length of query: 1098 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1075 Effective length of database: 18,503,978,556 Effective search space: 19891776947700 Effective search space used: 19891776947700 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
