| Clone Name | FLbaf19i14 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT831879.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN053O23, full insert sequence Length = 845 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 120 cgccgccctcgaccatctccgccgcc 145 ||||||||||||||| |||||||||| Sbjct: 228 cgccgccctcgaccacctccgccgcc 203
>ref|NM_001064810.1| Oryza sativa (japonica cultivar-group) Os06g0661500 (Os06g0661500) mRNA, complete cds Length = 830 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 120 cgccgccctcgaccatctccgccgcc 145 ||||||||||||||| |||||||||| Sbjct: 230 cgccgccctcgaccacctccgccgcc 205
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cgccgccctcgaccatctccgccgcc 145 ||||||||||||||| |||||||||| Sbjct: 26878713 cgccgccctcgaccacctccgccgcc 26878738
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 cccccgaggccccgaggccccg 98 |||||||||||||||||||||| Sbjct: 593001 cccccgaggccccgaggccccg 593022
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cgccgccctcgaccatctccgccgcc 145 ||||||||||||||| |||||||||| Sbjct: 2474 cgccgccctcgaccacctccgccgcc 2499
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cgccgccctcgaccatctccgccgcc 145 ||||||||||||||| |||||||||| Sbjct: 133339 cgccgccctcgaccacctccgccgcc 133364
>dbj|AK099401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E16, full insert sequence Length = 830 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 120 cgccgccctcgaccatctccgccgcc 145 ||||||||||||||| |||||||||| Sbjct: 230 cgccgccctcgaccacctccgccgcc 205
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 cccccgaggccccgaggccccg 98 |||||||||||||||||||||| Sbjct: 246774 cccccgaggccccgaggccccg 246795
>gb|U55029.1|CFU55029 Canis familiaris MHC class I DLA-53 gene, exons 1-3 Length = 3580 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 ccccgaggccccgaggccccg 98 ||||||||||||||||||||| Sbjct: 1237 ccccgaggccccgaggccccg 1217
>gb|AC090618.11| Homo sapiens chromosome 17, clone RP11-763E3, complete sequence Length = 195031 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 ttgagacaatgaagactgaag 564 ||||||||||||||||||||| Sbjct: 160826 ttgagacaatgaagactgaag 160846
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tcgccgccctcgaccatctccgccg 143 ||||||| ||||||||||||||||| Sbjct: 13660116 tcgccgcgctcgaccatctccgccg 13660140
>gb|AC036214.9| Homo sapiens chromosome 8, clone RP11-26J3, complete sequence Length = 160545 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 aagatgtcagctttctctata 631 ||||||||||||||||||||| Sbjct: 30572 aagatgtcagctttctctata 30592
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence Length = 148054 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cctccaggtgcccccgaggcc 87 ||||||||||||||||||||| Sbjct: 126630 cctccaggtgcccccgaggcc 126650
>gb|AC018952.9| Homo sapiens chromosome 8, clone RP11-498N9, complete sequence Length = 180535 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 611 aagatgtcagctttctctata 631 ||||||||||||||||||||| Sbjct: 102321 aagatgtcagctttctctata 102301
>gb|AC011073.8| Homo sapiens chromosome 17, clone RP11-51E18, complete sequence Length = 160616 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 ttgagacaatgaagactgaag 564 ||||||||||||||||||||| Sbjct: 154635 ttgagacaatgaagactgaag 154615
>emb|AJ249324.1|MXP249324 Mentha x piperita mRNA for isopentenyl monophosphate kinase (ipk gene) Length = 1481 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 553 tgaagactgaagctttttgcg 573 ||||||||||||||||||||| Sbjct: 161 tgaagactgaagctttttgcg 141
>emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, complete sequence Length = 115459 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 cccgaggccccgaggccccga 99 ||||||||||||||||||||| Sbjct: 38265 cccgaggccccgaggccccga 38245
>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence Length = 115368 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cctccaggtgcccccgaggcc 87 ||||||||||||||||||||| Sbjct: 103205 cctccaggtgcccccgaggcc 103225
>emb|CR381644.8| Zebrafish DNA sequence from clone CH211-80A15 in linkage group 8, complete sequence Length = 171750 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 597 gatgatgaagcaaaaagatgt 617 ||||||||||||||||||||| Sbjct: 91327 gatgatgaagcaaaaagatgt 91307
>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence Length = 222930 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 cccgaggccccgaggccccga 99 ||||||||||||||||||||| Sbjct: 79762 cccgaggccccgaggccccga 79782
>gb|AC108675.3| Homo sapiens 3 BAC RP11-760N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188894 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 463 ttccaagaccctgttgaatctcaac 487 |||| |||||||||||||||||||| Sbjct: 71192 ttcctagaccctgttgaatctcaac 71168
>emb|AL935276.16| Zebrafish DNA sequence from clone CH211-273J2, complete sequence Length = 164481 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 763 cttcctttgtaacttctattt 783 ||||||||||||||||||||| Sbjct: 151981 cttcctttgtaacttctattt 152001
>gb|AF179283.1|AF179283 Mentha x piperita isopentenyl monophosphate kinase (IPK) mRNA, complete cds Length = 1481 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 553 tgaagactgaagctttttgcg 573 ||||||||||||||||||||| Sbjct: 161 tgaagactgaagctttttgcg 141
>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09, complete sequence Length = 187359 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tcgccgccctcgaccatctccgccg 143 ||||||| ||||||||||||||||| Sbjct: 54724 tcgccgcgctcgaccatctccgccg 54748
>gb|U55026.1|CFU55026 Canis familiaris MHC class I DLA-12 gene, complete cds Length = 3943 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 ccccgaggccccgaggccccg 98 ||||||||||||||||||||| Sbjct: 1159 ccccgaggccccgaggccccg 1139 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 131,548,230 Number of extensions: 6862968 Number of successful extensions: 161825 Number of sequences better than 10.0: 25 Number of HSP's gapped: 161825 Number of HSP's successfully gapped: 25 Length of query: 827 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 805 Effective length of database: 18,508,616,841 Effective search space: 14899436557005 Effective search space used: 14899436557005 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)