| Clone Name | FLbaf19i13 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT834401.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA010G08, full insert sequence Length = 885 Score = 234 bits (118), Expect = 4e-58 Identities = 196/222 (88%) Strand = Plus / Plus Query: 172 tcccacccggcctacttcgagatgatcaaggaggcgatcgcggcgctcaaggacaggacc 231 ||||||||| | || |||||||||||||||||||||||| ||| ||| ||||| |||||| Sbjct: 182 tcccacccgccttatttcgagatgatcaaggaggcgatcacggtgcttaaggagaggacc 241 Query: 232 gggtcgagctcggtcgccatcgccaagtacattgaggagaagcacggcaaggcgctcccg 291 || |||||| || |||||||||||||||||| |||||||||||||| | |||| ||| Sbjct: 242 ggctcgagcgcgcacgccatcgccaagtacatggaggagaagcacggggcgtcgctgccg 301 Query: 292 gccaacttcaagaagatgctctccgtccagctccgcgcgtccgcctccaagggcaagctc 351 ||||||| |||||||||||||||| ||||||| |||| || ||| ||||||||||||||| Sbjct: 302 gccaactacaagaagatgctctccatccagctgcgcgggttcgcttccaagggcaagctc 361 Query: 352 gtcaaggtcaaggcatcctacaagctctccgacgctgccaag 393 |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 362 gtcaaggttaaggcctcctacaagctctccgacgccgccaag 403 Score = 123 bits (62), Expect = 1e-24 Identities = 115/132 (87%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 548 ccgccgccggcacgaagcgcaaggcgccggagaagaagaagctggtcgccaaggcgaaga 607 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 519 ccgccgctggcaccaagcgcaaggcgccggagaagaagg---tggtcgccaagcccaaga 575 Query: 608 agtcgccggcggctaaggccaaggcgaagccgaagaccgtccgctccccggccgccaaga 667 |||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 576 agtctccggcggcgaaggcgaaggccaagcccaagaccgtccggtcgccggccgcgaaga 635 Query: 668 aggcccgcaagg 679 || ||||||||| Sbjct: 636 agacccgcaagg 647
>emb|CT834400.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA222O16, full insert sequence Length = 887 Score = 234 bits (118), Expect = 4e-58 Identities = 196/222 (88%) Strand = Plus / Plus Query: 172 tcccacccggcctacttcgagatgatcaaggaggcgatcgcggcgctcaaggacaggacc 231 ||||||||| | || |||||||||||||||||||||||| ||| ||| ||||| |||||| Sbjct: 184 tcccacccgccttatttcgagatgatcaaggaggcgatcacggtgcttaaggagaggacc 243 Query: 232 gggtcgagctcggtcgccatcgccaagtacattgaggagaagcacggcaaggcgctcccg 291 || |||||| || |||||||||||||||||| |||||||||||||| | |||| ||| Sbjct: 244 ggctcgagcgcgcacgccatcgccaagtacatggaggagaagcacggggcgtcgctgccg 303 Query: 292 gccaacttcaagaagatgctctccgtccagctccgcgcgtccgcctccaagggcaagctc 351 ||||||| |||||||||||||||| ||||||| |||| || ||| ||||||||||||||| Sbjct: 304 gccaactacaagaagatgctctccatccagctgcgcgggttcgcttccaagggcaagctc 363 Query: 352 gtcaaggtcaaggcatcctacaagctctccgacgctgccaag 393 |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 364 gtcaaggttaaggcctcctacaagctctccgacgccgccaag 405 Score = 123 bits (62), Expect = 1e-24 Identities = 115/132 (87%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 548 ccgccgccggcacgaagcgcaaggcgccggagaagaagaagctggtcgccaaggcgaaga 607 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 521 ccgccgctggcaccaagcgcaaggcgccggagaagaagg---tggtcgccaagcccaaga 577 Query: 608 agtcgccggcggctaaggccaaggcgaagccgaagaccgtccgctccccggccgccaaga 667 |||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 578 agtctccggcggcgaaggcgaaggccaagcccaagaccgtccggtcgccggccgcgaaga 637 Query: 668 aggcccgcaagg 679 || ||||||||| Sbjct: 638 agacccgcaagg 649
>emb|CT834399.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI024E12, full insert sequence Length = 887 Score = 234 bits (118), Expect = 4e-58 Identities = 196/222 (88%) Strand = Plus / Plus Query: 172 tcccacccggcctacttcgagatgatcaaggaggcgatcgcggcgctcaaggacaggacc 231 ||||||||| | || |||||||||||||||||||||||| ||| ||| ||||| |||||| Sbjct: 183 tcccacccgccttatttcgagatgatcaaggaggcgatcacggtgcttaaggagaggacc 242 Query: 232 gggtcgagctcggtcgccatcgccaagtacattgaggagaagcacggcaaggcgctcccg 291 || |||||| || |||||||||||||||||| |||||||||||||| | |||| ||| Sbjct: 243 ggctcgagcgcgcacgccatcgccaagtacatggaggagaagcacggggcgtcgctgccg 302 Query: 292 gccaacttcaagaagatgctctccgtccagctccgcgcgtccgcctccaagggcaagctc 351 ||||||| |||||||||||||||| ||||||| |||| || ||| ||||||||||||||| Sbjct: 303 gccaactacaagaagatgctctccatccagctgcgcgggttcgcttccaagggcaagctc 362 Query: 352 gtcaaggtcaaggcatcctacaagctctccgacgctgccaag 393 |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 363 gtcaaggttaaggcctcctacaagctctccgacgccgccaag 404 Score = 123 bits (62), Expect = 1e-24 Identities = 115/132 (87%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 548 ccgccgccggcacgaagcgcaaggcgccggagaagaagaagctggtcgccaaggcgaaga 607 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 520 ccgccgctggcaccaagcgcaaggcgccggagaagaagg---tggtcgccaagcccaaga 576 Query: 608 agtcgccggcggctaaggccaaggcgaagccgaagaccgtccgctccccggccgccaaga 667 |||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 577 agtctccggcggcgaaggcgaaggccaagcccaagaccgtccggtcgccggccgcgaaga 636 Query: 668 aggcccgcaagg 679 || ||||||||| Sbjct: 637 agacccgcaagg 648
>emb|CT834398.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI005K12, full insert sequence Length = 855 Score = 234 bits (118), Expect = 4e-58 Identities = 196/222 (88%) Strand = Plus / Plus Query: 172 tcccacccggcctacttcgagatgatcaaggaggcgatcgcggcgctcaaggacaggacc 231 ||||||||| | || |||||||||||||||||||||||| ||| ||| ||||| |||||| Sbjct: 182 tcccacccgccttatttcgagatgatcaaggaggcgatcacggtgcttaaggagaggacc 241 Query: 232 gggtcgagctcggtcgccatcgccaagtacattgaggagaagcacggcaaggcgctcccg 291 || |||||| || |||||||||||||||||| |||||||||||||| | |||| ||| Sbjct: 242 ggctcgagcgcgcacgccatcgccaagtacatggaggagaagcacggggcgtcgctgccg 301 Query: 292 gccaacttcaagaagatgctctccgtccagctccgcgcgtccgcctccaagggcaagctc 351 ||||||| |||||||||||||||| ||||||| |||| || ||| ||||||||||||||| Sbjct: 302 gccaactacaagaagatgctctccatccagctgcgcgggttcgcttccaagggcaagctc 361 Query: 352 gtcaaggtcaaggcatcctacaagctctccgacgctgccaag 393 |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 362 gtcaaggttaaggcctcctacaagctctccgacgccgccaag 403 Score = 123 bits (62), Expect = 1e-24 Identities = 115/132 (87%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 548 ccgccgccggcacgaagcgcaaggcgccggagaagaagaagctggtcgccaaggcgaaga 607 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 519 ccgccgctggcaccaagcgcaaggcgccggagaagaagg---tggtcgccaagcccaaga 575 Query: 608 agtcgccggcggctaaggccaaggcgaagccgaagaccgtccgctccccggccgccaaga 667 |||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 576 agtctccggcggcgaaggcgaaggccaagcccaagaccgtccggtcgccggccgcgaaga 635 Query: 668 aggcccgcaagg 679 || ||||||||| Sbjct: 636 agacccgcaagg 647
>emb|CT834397.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA018I17, full insert sequence Length = 885 Score = 234 bits (118), Expect = 4e-58 Identities = 196/222 (88%) Strand = Plus / Plus Query: 172 tcccacccggcctacttcgagatgatcaaggaggcgatcgcggcgctcaaggacaggacc 231 ||||||||| | || |||||||||||||||||||||||| ||| ||| ||||| |||||| Sbjct: 180 tcccacccgccttatttcgagatgatcaaggaggcgatcacggtgcttaaggagaggacc 239 Query: 232 gggtcgagctcggtcgccatcgccaagtacattgaggagaagcacggcaaggcgctcccg 291 || |||||| || |||||||||||||||||| |||||||||||||| | |||| ||| Sbjct: 240 ggctcgagcgcgcacgccatcgccaagtacatggaggagaagcacggggcgtcgctgccg 299 Query: 292 gccaacttcaagaagatgctctccgtccagctccgcgcgtccgcctccaagggcaagctc 351 ||||||| |||||||||||||||| ||||||| |||| || ||| ||||||||||||||| Sbjct: 300 gccaactacaagaagatgctctccatccagctgcgcgggttcgcttccaagggcaagctc 359 Query: 352 gtcaaggtcaaggcatcctacaagctctccgacgctgccaag 393 |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 360 gtcaaggttaaggcctcctacaagctctccgacgccgccaag 401 Score = 123 bits (62), Expect = 1e-24 Identities = 115/132 (87%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 548 ccgccgccggcacgaagcgcaaggcgccggagaagaagaagctggtcgccaaggcgaaga 607 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 517 ccgccgctggcaccaagcgcaaggcgccggagaagaagg---tggtcgccaagcccaaga 573 Query: 608 agtcgccggcggctaaggccaaggcgaagccgaagaccgtccgctccccggccgccaaga 667 |||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 574 agtctccggcggcgaaggcgaaggccaagcccaagaccgtccggtcgccggccgcgaaga 633 Query: 668 aggcccgcaagg 679 || ||||||||| Sbjct: 634 agacccgcaagg 645
>ref|NM_001058855.1| Oryza sativa (japonica cultivar-group) Os04g0253000 (Os04g0253000) mRNA, partial cds Length = 890 Score = 234 bits (118), Expect = 4e-58 Identities = 196/222 (88%) Strand = Plus / Plus Query: 172 tcccacccggcctacttcgagatgatcaaggaggcgatcgcggcgctcaaggacaggacc 231 ||||||||| | || |||||||||||||||||||||||| ||| ||| ||||| |||||| Sbjct: 178 tcccacccgccttatttcgagatgatcaaggaggcgatcacggtgcttaaggagaggacc 237 Query: 232 gggtcgagctcggtcgccatcgccaagtacattgaggagaagcacggcaaggcgctcccg 291 || |||||| || |||||||||||||||||| |||||||||||||| | |||| ||| Sbjct: 238 ggctcgagcgcgcacgccatcgccaagtacatggaggagaagcacggggcgtcgctgccg 297 Query: 292 gccaacttcaagaagatgctctccgtccagctccgcgcgtccgcctccaagggcaagctc 351 ||||||| |||||||||||||||| ||||||| |||| || ||| ||||||||||||||| Sbjct: 298 gccaactacaagaagatgctctccatccagctgcgcgggttcgcttccaagggcaagctc 357 Query: 352 gtcaaggtcaaggcatcctacaagctctccgacgctgccaag 393 |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 358 gtcaaggttaaggcctcctacaagctctccgacgccgccaag 399 Score = 123 bits (62), Expect = 1e-24 Identities = 115/132 (87%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 548 ccgccgccggcacgaagcgcaaggcgccggagaagaagaagctggtcgccaaggcgaaga 607 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 515 ccgccgctggcaccaagcgcaaggcgccggagaagaagg---tggtcgccaagcccaaga 571 Query: 608 agtcgccggcggctaaggccaaggcgaagccgaagaccgtccgctccccggccgccaaga 667 |||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 572 agtctccggcggcgaaggcgaaggccaagcccaagaccgtccggtcgccggccgcgaaga 631 Query: 668 aggcccgcaagg 679 || ||||||||| Sbjct: 632 agacccgcaagg 643
>dbj|AK073668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052L06, full insert sequence Length = 891 Score = 234 bits (118), Expect = 4e-58 Identities = 196/222 (88%) Strand = Plus / Plus Query: 172 tcccacccggcctacttcgagatgatcaaggaggcgatcgcggcgctcaaggacaggacc 231 ||||||||| | || |||||||||||||||||||||||| ||| ||| ||||| |||||| Sbjct: 179 tcccacccgccttatttcgagatgatcaaggaggcgatcacggtgcttaaggagaggacc 238 Query: 232 gggtcgagctcggtcgccatcgccaagtacattgaggagaagcacggcaaggcgctcccg 291 || |||||| || |||||||||||||||||| |||||||||||||| | |||| ||| Sbjct: 239 ggctcgagcgcgcacgccatcgccaagtacatggaggagaagcacggggcgtcgctgccg 298 Query: 292 gccaacttcaagaagatgctctccgtccagctccgcgcgtccgcctccaagggcaagctc 351 ||||||| |||||||||||||||| ||||||| |||| || ||| ||||||||||||||| Sbjct: 299 gccaactacaagaagatgctctccatccagctgcgcgggttcgcttccaagggcaagctc 358 Query: 352 gtcaaggtcaaggcatcctacaagctctccgacgctgccaag 393 |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 359 gtcaaggttaaggcctcctacaagctctccgacgccgccaag 400 Score = 123 bits (62), Expect = 1e-24 Identities = 115/132 (87%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 548 ccgccgccggcacgaagcgcaaggcgccggagaagaagaagctggtcgccaaggcgaaga 607 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 516 ccgccgctggcaccaagcgcaaggcgccggagaagaagg---tggtcgccaagcccaaga 572 Query: 608 agtcgccggcggctaaggccaaggcgaagccgaagaccgtccgctccccggccgccaaga 667 |||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 573 agtctccggcggcgaaggcgaaggccaagcccaagaccgtccggtcgccggccgcgaaga 632 Query: 668 aggcccgcaagg 679 || ||||||||| Sbjct: 633 agacccgcaagg 644
>emb|CR855060.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0616A11, complete sequence Length = 100074 Score = 220 bits (111), Expect = 7e-54 Identities = 180/203 (88%) Strand = Plus / Plus Query: 191 agatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgcca 250 |||||||||||||||||||| ||| ||| ||||| |||||||| |||||| || ||||| Sbjct: 23989 agatgatcaaggaggcgatcacggtgcttaaggagaggaccggctcgagcgcgcacgcca 24048 Query: 251 tcgccaagtacattgaggagaagcacggcaaggcgctcccggccaacttcaagaagatgc 310 ||||||||||||| |||||||||||||| | |||| |||||||||| ||||||||||| Sbjct: 24049 tcgccaagtacatggaggagaagcacggggcgtcgctgccggccaactacaagaagatgc 24108 Query: 311 tctccgtccagctccgcgcgtccgcctccaagggcaagctcgtcaaggtcaaggcatcct 370 ||||| ||||||| |||| || ||| ||||||||||||||||||||||| ||||| |||| Sbjct: 24109 tctccatccagctgcgcgggttcgcttccaagggcaagctcgtcaaggttaaggcctcct 24168 Query: 371 acaagctctccgacgctgccaag 393 |||||||||||||||| |||||| Sbjct: 24169 acaagctctccgacgccgccaag 24191 Score = 123 bits (62), Expect = 1e-24 Identities = 115/132 (87%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 548 ccgccgccggcacgaagcgcaaggcgccggagaagaagaagctggtcgccaaggcgaaga 607 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 24307 ccgccgctggcaccaagcgcaaggcgccggagaagaagg---tggtcgccaagcccaaga 24363 Query: 608 agtcgccggcggctaaggccaaggcgaagccgaagaccgtccgctccccggccgccaaga 667 |||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 24364 agtctccggcggcgaaggcgaaggccaagcccaagaccgtccggtcgccggccgcgaaga 24423 Query: 668 aggcccgcaagg 679 || ||||||||| Sbjct: 24424 agacccgcaagg 24435
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 220 bits (111), Expect = 7e-54 Identities = 180/203 (88%) Strand = Plus / Plus Query: 191 agatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgcca 250 |||||||||||||||||||| ||| ||| ||||| |||||||| |||||| || ||||| Sbjct: 10046282 agatgatcaaggaggcgatcacggtgcttaaggagaggaccggctcgagcgcgcacgcca 10046341 Query: 251 tcgccaagtacattgaggagaagcacggcaaggcgctcccggccaacttcaagaagatgc 310 ||||||||||||| |||||||||||||| | |||| |||||||||| ||||||||||| Sbjct: 10046342 tcgccaagtacatggaggagaagcacggggcgtcgctgccggccaactacaagaagatgc 10046401 Query: 311 tctccgtccagctccgcgcgtccgcctccaagggcaagctcgtcaaggtcaaggcatcct 370 ||||| ||||||| |||| || ||| ||||||||||||||||||||||| ||||| |||| Sbjct: 10046402 tctccatccagctgcgcgggttcgcttccaagggcaagctcgtcaaggttaaggcctcct 10046461 Query: 371 acaagctctccgacgctgccaag 393 |||||||||||||||| |||||| Sbjct: 10046462 acaagctctccgacgccgccaag 10046484 Score = 123 bits (62), Expect = 1e-24 Identities = 115/132 (87%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 548 ccgccgccggcacgaagcgcaaggcgccggagaagaagaagctggtcgccaaggcgaaga 607 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 10046600 ccgccgctggcaccaagcgcaaggcgccggagaagaagg---tggtcgccaagcccaaga 10046656 Query: 608 agtcgccggcggctaaggccaaggcgaagccgaagaccgtccgctccccggccgccaaga 667 |||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 10046657 agtctccggcggcgaaggcgaaggccaagcccaagaccgtccggtcgccggccgcgaaga 10046716 Query: 668 aggcccgcaagg 679 || ||||||||| Sbjct: 10046717 agacccgcaagg 10046728 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 660 cgccaagaaggcccgcaaggtcgccgccg 688 |||||||||| ||||||||||||||||| Sbjct: 312213 cgccaagaagctccgcaaggtcgccgccg 312241
>emb|AL607007.3|OSJN00118 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018J12, complete sequence Length = 120004 Score = 220 bits (111), Expect = 7e-54 Identities = 180/203 (88%) Strand = Plus / Plus Query: 191 agatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgcca 250 |||||||||||||||||||| ||| ||| ||||| |||||||| |||||| || ||||| Sbjct: 26766 agatgatcaaggaggcgatcacggtgcttaaggagaggaccggctcgagcgcgcacgcca 26825 Query: 251 tcgccaagtacattgaggagaagcacggcaaggcgctcccggccaacttcaagaagatgc 310 ||||||||||||| |||||||||||||| | |||| |||||||||| ||||||||||| Sbjct: 26826 tcgccaagtacatggaggagaagcacggggcgtcgctgccggccaactacaagaagatgc 26885 Query: 311 tctccgtccagctccgcgcgtccgcctccaagggcaagctcgtcaaggtcaaggcatcct 370 ||||| ||||||| |||| || ||| ||||||||||||||||||||||| ||||| |||| Sbjct: 26886 tctccatccagctgcgcgggttcgcttccaagggcaagctcgtcaaggttaaggcctcct 26945 Query: 371 acaagctctccgacgctgccaag 393 |||||||||||||||| |||||| Sbjct: 26946 acaagctctccgacgccgccaag 26968 Score = 123 bits (62), Expect = 1e-24 Identities = 115/132 (87%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 548 ccgccgccggcacgaagcgcaaggcgccggagaagaagaagctggtcgccaaggcgaaga 607 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 27084 ccgccgctggcaccaagcgcaaggcgccggagaagaagg---tggtcgccaagcccaaga 27140 Query: 608 agtcgccggcggctaaggccaaggcgaagccgaagaccgtccgctccccggccgccaaga 667 |||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 27141 agtctccggcggcgaaggcgaaggccaagcccaagaccgtccggtcgccggccgcgaaga 27200 Query: 668 aggcccgcaagg 679 || ||||||||| Sbjct: 27201 agacccgcaagg 27212
>gb|AF527615.1| Zea mays histone H1-like protein HON101 (hon101) mRNA, complete cds Length = 780 Score = 194 bits (98), Expect = 4e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 172 tcccacccggcctacttcgagatgatcaaggaggcgatcgcggcgctcaaggacaggacc 231 ||||||||| | ||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 186 tcccacccgccttacttcgagatgatcaaggaggctatcacggcgctcaaggagaggacc 245 Query: 232 gggtcgagctcggtcgccatcgccaagtacattgaggagaagcacggcaaggcgctcccg 291 || || |||||| || ||||||||||| | | ||| ||||||||| | | || ||| Sbjct: 246 ggctccagctcgcaagcgatcgccaagtatgtgggggacaagcacggcgcgtctctgccg 305 Query: 292 gccaacttcaagaagatgctctccgtccagctccgcgcgtccgcctccaagggcaagctc 351 |||||||||||||||||||| ||| |||||||||| | |||||| |||||||||||||| Sbjct: 306 gccaacttcaagaagatgctttccatccagctccgtgggtccgcagccaagggcaagctc 365 Query: 352 gtcaaggtcaaggcatcctacaagctctccgacgctgccaagaagg 397 || ||||||||||| || ||||||||||| ||||| |||||||||| Sbjct: 366 gtgaaggtcaaggcttcgtacaagctctcggacgccgccaagaagg 411 Score = 54.0 bits (27), Expect = 9e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 581 agaagaagctggtcgccaaggcgaagaagtcgccggcggctaaggccaaggcgaagccga 640 |||||||| | || || ||| |||||||||| || || || ||||||||||| ||||||| Sbjct: 565 agaagaaggtcgtggcgaagccgaagaagtcccccgccgccaaggccaaggccaagccga 624 Query: 641 agaccgt 647 ||||||| Sbjct: 625 agaccgt 631
>gb|AY104249.1| Zea mays PCO063043 mRNA sequence Length = 942 Score = 194 bits (98), Expect = 4e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 172 tcccacccggcctacttcgagatgatcaaggaggcgatcgcggcgctcaaggacaggacc 231 ||||||||| | ||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 200 tcccacccgccttacttcgagatgatcaaggaggctatcacggcgctcaaggagaggacc 259 Query: 232 gggtcgagctcggtcgccatcgccaagtacattgaggagaagcacggcaaggcgctcccg 291 || || |||||| || ||||||||||| | | ||| ||||||||| | | || ||| Sbjct: 260 ggctccagctcgcaagcgatcgccaagtatgtgggggacaagcacggcgcgtctctgccg 319 Query: 292 gccaacttcaagaagatgctctccgtccagctccgcgcgtccgcctccaagggcaagctc 351 |||||||||||||||||||| ||| |||||||||| | |||||| |||||||||||||| Sbjct: 320 gccaacttcaagaagatgctttccatccagctccgtgggtccgcagccaagggcaagctc 379 Query: 352 gtcaaggtcaaggcatcctacaagctctccgacgctgccaagaagg 397 || ||||||||||| || ||||||||||| ||||| |||||||||| Sbjct: 380 gtgaaggtcaaggcttcgtacaagctctcggacgccgccaagaagg 425 Score = 54.0 bits (27), Expect = 9e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 581 agaagaagctggtcgccaaggcgaagaagtcgccggcggctaaggccaaggcgaagccga 640 |||||||| | || || ||| |||||||||| || || || ||||||||||| ||||||| Sbjct: 579 agaagaaggtcgtggcgaagccgaagaagtcccccgccgccaaggccaaggccaagccga 638 Query: 641 agaccgt 647 ||||||| Sbjct: 639 agaccgt 645
>dbj|D87064.1| Triticum aestivum gene for histone H1, complete cds, clone:TH315 Length = 3025 Score = 87.7 bits (44), Expect = 6e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 201 ggaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagta 260 |||||||||||| ||||| ||||| |||| |||||||||| | ||||||||||||||||| Sbjct: 1202 ggaggcgatcgccgcgctgaaggagaggaacgggtcgagcaccgtcgccatcgccaagta 1261 Query: 261 cattgaggagaagcac 276 ||| ||||| |||||| Sbjct: 1262 catcgaggacaagcac 1277 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 354 caaggtcaaggcatcctacaagctc 378 |||||||||||| |||||||||||| Sbjct: 1355 caaggtcaaggcctcctacaagctc 1379
>ref|NM_001063227.1| Oryza sativa (japonica cultivar-group) Os06g0130800 (Os06g0130800) mRNA, complete cds Length = 1046 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 174 ccacccggcctacttcgagatgatcaaggaggcgatc 210 ||||||| ||||||||||||||||||||||||||||| Sbjct: 303 ccacccgccctacttcgagatgatcaaggaggcgatc 339
>dbj|AK069863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037L12, full insert sequence Length = 1049 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 174 ccacccggcctacttcgagatgatcaaggaggcgatc 210 ||||||| ||||||||||||||||||||||||||||| Sbjct: 304 ccacccgccctacttcgagatgatcaaggaggcgatc 340
>gb|U74296.1|OSU74296 Oryza sativa water stress inducible protein (KCDL917) mRNA, complete cds Length = 858 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 174 ccacccggcctacttcgagatgatcaaggaggcgatc 210 ||||||| ||||||||||||||||||||||||||||| Sbjct: 53 ccacccgccctacttcgagatgatcaaggaggcgatc 89
>emb|CT829525.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA033E02, full insert sequence Length = 1393 Score = 63.9 bits (32), Expect = 9e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagc 240 |||||||||| ||||||||||||| |||| ||||| ||||||||||||||| Sbjct: 290 cgagatgatctcggaggcgatcgcgacgctgaaggagaggaccgggtcgagc 341
>ref|NM_001058108.1| Oryza sativa (japonica cultivar-group) Os03g0799000 (Os03g0799000) mRNA, complete cds Length = 1386 Score = 63.9 bits (32), Expect = 9e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagc 240 |||||||||| ||||||||||||| |||| ||||| ||||||||||||||| Sbjct: 285 cgagatgatctcggaggcgatcgcgacgctgaaggagaggaccgggtcgagc 336
>dbj|AK099211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E13, full insert sequence Length = 1328 Score = 63.9 bits (32), Expect = 9e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagc 240 |||||||||| ||||||||||||| |||| ||||| ||||||||||||||| Sbjct: 286 cgagatgatctcggaggcgatcgcgacgctgaaggagaggaccgggtcgagc 337
>dbj|AK067840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128M09, full insert sequence Length = 1389 Score = 63.9 bits (32), Expect = 9e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagc 240 |||||||||| ||||||||||||| |||| ||||| ||||||||||||||| Sbjct: 286 cgagatgatctcggaggcgatcgcgacgctgaaggagaggaccgggtcgagc 337
>gb|AF107025.1|AF107025 Triticum aestivum similar to histone H1 mRNA sequence Length = 1082 Score = 63.9 bits (32), Expect = 9e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 201 ggaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagta 260 |||||||||||| || || ||||| || |||||||||| | ||||||||||||||||| Sbjct: 106 ggaggcgatcgccgccctgaaggagagaggcgggtcgagcaccgtcgccatcgccaagta 165 Query: 261 cattgaggagaagcac 276 ||| ||||| |||||| Sbjct: 166 catcgaggacaagcac 181
>gb|DQ244332.1| Zea mays clone 5009 mRNA sequence Length = 1078 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 202 gaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagtac 261 ||||||||||| || |||||||| |||| |||||||||||||| |||||| ||||||| Sbjct: 279 gaggcgatcgctgccctcaaggagaggaaggggtcgagctcggtggccatcagcaagtac 338 Query: 262 attgaggagaagca 275 | |||| |||||| Sbjct: 339 gtcgaggggaagca 352
>emb|CT830903.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN007A09, full insert sequence Length = 1173 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctc 242 ||||||||||| ||||||||||| |||||| ||||| ||||| || |||||||| Sbjct: 346 cgagatgatcatggaggcgatcgtggcgctgaaggagaggactggatcgagctc 399
>dbj|AK242612.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090016I09, full insert sequence Length = 3921 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctc 242 ||||||||||| ||||||||||| |||||| ||||| ||||| || |||||||| Sbjct: 180 cgagatgatcatggaggcgatcgtggcgctgaaggagaggactggatcgagctc 233
>ref|NM_001065595.1| Oryza sativa (japonica cultivar-group) Os07g0184800 (Os07g0184800) mRNA, complete cds Length = 1177 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctc 242 ||||||||||| ||||||||||| |||||| ||||| ||||| || |||||||| Sbjct: 350 cgagatgatcatggaggcgatcgtggcgctgaaggagaggactggatcgagctc 403
>gb|AF461814.1| Zea mays histone H1-like protein (hon102) mRNA, complete cds Length = 991 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 202 gaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagtac 261 ||||||||||| || |||||||| |||| |||||||||||||| |||||| ||||||| Sbjct: 238 gaggcgatcgctgccctcaaggagaggaaggggtcgagctcggtggccatcagcaagtac 297 Query: 262 attgaggagaagca 275 | |||| |||||| Sbjct: 298 gtcgaggggaagca 311
>gb|BT018031.1| Zea mays clone EL01N0530C09.c mRNA sequence Length = 1299 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 202 gaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagtac 261 ||||||||||| || |||||||| |||| |||||||||||||| |||||| ||||||| Sbjct: 470 gaggcgatcgctgccctcaaggagaggaaggggtcgagctcggtggccatcagcaagtac 529 Query: 262 attgaggagaagca 275 | |||| |||||| Sbjct: 530 gtcgaggggaagca 543
>gb|BT016467.1| Zea mays clone Contig300 mRNA sequence Length = 1100 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 202 gaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagtac 261 ||||||||||| || |||||||| |||| |||||||||||||| |||||| ||||||| Sbjct: 276 gaggcgatcgctgccctcaaggagaggaaggggtcgagctcggtggccatcagcaagtac 335 Query: 262 attgaggagaagca 275 | |||| |||||| Sbjct: 336 gtcgaggggaagca 349
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 191 agatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagc 240 |||||||| ||||||||||||| |||| ||||| ||||||||||||||| Sbjct: 33091449 agatgatctcggaggcgatcgcgacgctgaaggagaggaccgggtcgagc 33091498 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 197 tcaaggaggcgatcgcggcgctcaaggac 225 ||||||||||||||| |||||||| |||| Sbjct: 14872315 tcaaggaggcgatcgaggcgctcagggac 14872343 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 aagaccgccgccgccgccggc 558 ||||||||||||||||||||| Sbjct: 18731801 aagaccgccgccgccgccggc 18731781
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 191 agatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagc 240 |||||||| ||||||||||||| |||| ||||| ||||||||||||||| Sbjct: 122369 agatgatctcggaggcgatcgcgacgctgaaggagaggaccgggtcgagc 122320
>dbj|AK106132.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F12, full insert sequence Length = 1174 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctc 242 ||||||||||| ||||||||||| |||||| ||||| ||||| || |||||||| Sbjct: 347 cgagatgatcatggaggcgatcgtggcgctgaaggagaggactggatcgagctc 400
>dbj|AK102642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100F04, full insert sequence Length = 1175 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctc 242 ||||||||||| ||||||||||| |||||| ||||| ||||| || |||||||| Sbjct: 348 cgagatgatcatggaggcgatcgtggcgctgaaggagaggactggatcgagctc 401
>dbj|AK099050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148D20, full insert sequence Length = 1175 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctc 242 ||||||||||| ||||||||||| |||||| ||||| ||||| || |||||||| Sbjct: 348 cgagatgatcatggaggcgatcgtggcgctgaaggagaggactggatcgagctc 401
>dbj|AK059544.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F03, full insert sequence Length = 1177 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctc 242 ||||||||||| ||||||||||| |||||| ||||| ||||| || |||||||| Sbjct: 350 cgagatgatcatggaggcgatcgtggcgctgaaggagaggactggatcgagctc 403
>gb|AY103883.1| Zea mays PCO072547 mRNA sequence Length = 1156 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 202 gaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagtac 261 ||||||||||| || |||||||| |||| |||||||||||||| |||||| ||||||| Sbjct: 284 gaggcgatcgctgccctcaaggagaggaaggggtcgagctcggtggccatcagcaagtac 343 Query: 262 attgaggagaagca 275 | |||| |||||| Sbjct: 344 gtcgaggggaagca 357
>gb|AY109570.1| Zea mays CL1864_2 mRNA sequence Length = 1002 Score = 58.0 bits (29), Expect = 6e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 174 ccacccggcctacttcgagatgatcaaggaggcgatc 210 ||||||| |||| |||||||||||||||||||||||| Sbjct: 698 ccacccgccctatttcgagatgatcaaggaggcgatc 662 Score = 44.1 bits (22), Expect = 0.84 Identities = 28/30 (93%) Strand = Plus / Minus Query: 349 ctcgtcaaggtcaaggcatcctacaagctc 378 ||||||||||||||||| |||| ||||||| Sbjct: 520 ctcgtcaaggtcaaggcctccttcaagctc 491
>emb|CT828417.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA057A07, full insert sequence Length = 1307 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 191 agatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctc 242 ||||||||| ||||||||||| |||||| ||||| ||||| || |||||||| Sbjct: 482 agatgatcatggaggcgatcgtggcgctgaaggagaggactggatcgagctc 533
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 191 agatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctc 242 ||||||||| ||||||||||| |||||| ||||| ||||| || |||||||| Sbjct: 4516083 agatgatcatggaggcgatcgtggcgctgaaggagaggactggatcgagctc 4516134
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 191 agatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagctc 242 ||||||||| ||||||||||| |||||| ||||| ||||| || |||||||| Sbjct: 94802 agatgatcatggaggcgatcgtggcgctgaaggagaggactggatcgagctc 94853
>gb|AF107027.1|AF107027 Triticum aestivum histone H1 WH1A.4 mRNA, complete cds Length = 975 Score = 50.1 bits (25), Expect = 0.014 Identities = 64/77 (83%) Strand = Plus / Plus Query: 201 ggaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagta 260 |||||||||||| || || ||||| |||| |||||||||| | |||| |||| ||||| Sbjct: 212 ggaggcgatcgccgccctgaaggagaggagcgggtcgagcaccatcgcgatcggcaagtt 271 Query: 261 cattgaggagaagcacg 277 ||| ||||| ||||||| Sbjct: 272 catcgaggacaagcacg 288
>gb|BT018112.1| Zea mays clone EL01N0553G06.c mRNA sequence Length = 1005 Score = 48.1 bits (24), Expect = 0.054 Identities = 33/36 (91%) Strand = Plus / Plus Query: 201 ggaggcgatcgcggcgctcaaggacaggaccgggtc 236 ||||||||||||| |||||||||| ||||| ||||| Sbjct: 254 ggaggcgatcgcgtcgctcaaggagaggacggggtc 289
>emb|X59872.2|TAHISTH1 T.aestivum L mRNA for histone H1 Length = 1031 Score = 48.1 bits (24), Expect = 0.054 Identities = 63/76 (82%) Strand = Plus / Plus Query: 201 ggaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagta 260 |||||||||||| || || ||||| |||| |||||||||| | |||| |||| ||||| Sbjct: 255 ggaggcgatcgccgccctgaaggagaggagcgggtcgagcaccatcgcgatcggcaagtt 314 Query: 261 cattgaggagaagcac 276 ||| ||||| |||||| Sbjct: 315 catcgaggacaagcac 330
>gb|AF107026.1|AF107026 Triticum aestivum histone H1 WH1A.3 mRNA, partial cds Length = 952 Score = 48.1 bits (24), Expect = 0.054 Identities = 63/76 (82%) Strand = Plus / Plus Query: 201 ggaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagta 260 |||||||||||| || || ||||| |||| |||||||||| | |||| ||||| |||| Sbjct: 154 ggaggcgatcgccgccctgaaggagaggagcgggtcgagcaccatcgcgatcgcaaagtt 213 Query: 261 cattgaggagaagcac 276 ||| ||||| |||||| Sbjct: 214 catcgaggacaagcac 229
>gb|AF107023.1|AF107023 Triticum aestivum histone H1 WH1A.2 mRNA, complete cds Length = 1019 Score = 48.1 bits (24), Expect = 0.054 Identities = 63/76 (82%) Strand = Plus / Plus Query: 201 ggaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagta 260 |||||||||||| || || ||||| |||| |||||||||| | |||| |||| ||||| Sbjct: 221 ggaggcgatcgccgccctgaaggagaggagcgggtcgagcaccatcgcgatcggcaagtt 280 Query: 261 cattgaggagaagcac 276 ||| ||||| |||||| Sbjct: 281 catcgaggataagcac 296
>gb|AF107022.1|AF107022 Triticum aestivum histone H1 WH1A.1 mRNA, complete cds Length = 1050 Score = 48.1 bits (24), Expect = 0.054 Identities = 63/76 (82%) Strand = Plus / Plus Query: 201 ggaggcgatcgcggcgctcaaggacaggaccgggtcgagctcggtcgccatcgccaagta 260 |||||||||||| || || ||||| |||| |||||||||| | |||| |||| ||||| Sbjct: 229 ggaggcgatcgccgccctgaaggagaggagcgggtcgagcaccatcgcgatcggcaagtt 288 Query: 261 cattgaggagaagcac 276 ||| ||||| |||||| Sbjct: 289 catcgaggacaagcac 304
>emb|Z99972.1|MAZ99972 Musa acuminata mRNA for putative histine H1 (clone pBAN ED88) Length = 729 Score = 48.1 bits (24), Expect = 0.054 Identities = 45/52 (86%) Strand = Plus / Plus Query: 189 cgagatgatcaaggaggcgatcgcggcgctcaaggacaggaccgggtcgagc 240 ||||||||||| ||||||||||| | |||| ||||| | |||||||||||| Sbjct: 288 cgagatgatcatggaggcgatcgtgacgctgaaggagcgcaccgggtcgagc 339
>gb|DQ658343.1| Emiliania huxleyi clone Plate2_E23_5p;77-2-30-E07 hypothetical protein, partial cds Length = 1265 Score = 46.1 bits (23), Expect = 0.21 Identities = 26/27 (96%) Strand = Plus / Plus Query: 197 tcaaggaggcgatcgcggcgctcaagg 223 ||||||||||||||| ||||||||||| Sbjct: 591 tcaaggaggcgatcgaggcgctcaagg 617
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 534 caagaagaccgccgccgccgccg 556 ||||||||||||||||||||||| Sbjct: 832660 caagaagaccgccgccgccgccg 832638 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 534 caagaagaccgccgccgccgccg 556 ||||||||||||||||||||||| Sbjct: 2487090 caagaagaccgccgccgccgccg 2487068 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 534 caagaagaccgccgccgccgccg 556 ||||||||||||||||||||||| Sbjct: 3348989 caagaagaccgccgccgccgccg 3349011 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 accgccgccgccgccggcacg 561 ||||||||||||||||||||| Sbjct: 1494353 accgccgccgccgccggcacg 1494373
>ref|XM_957359.1| Neurospora crassa OR74A hypothetical protein (NCU07936.1) partial mRNA Length = 2205 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 657 ggccgccaagaaggcccgcaagg 679 ||||||||||||||||||||||| Sbjct: 1779 ggccgccaagaaggcccgcaagg 1801
>emb|CR352328.13| Zebrafish DNA sequence from clone CH211-212K18 in linkage group 7, complete sequence Length = 208530 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Plus Query: 567 caaggcgccggagaagaagaag 588 |||||||||||||||||||||| Sbjct: 103698 caaggcgccggagaagaagaag 103719
>gb|AE005824.1| Caulobacter crescentus CB15 section 150 of 359 of the complete genome Length = 10405 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 cccggccaacttcaagaagatg 309 |||||||||||||||||||||| Sbjct: 5739 cccggccaacttcaagaagatg 5760
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 agatgatcaaggaggcgatcgcggcg 216 ||||| |||||||||||||||||||| Sbjct: 2019050 agatgctcaaggaggcgatcgcggcg 2019075
>ref|XM_001227536.1| Chaetomium globosum CBS 148.51 conserved hypothetical protein (CHGG_09610) mRNA, complete cds Length = 1137 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 ggctaaggccaaggcgaagcc 638 ||||||||||||||||||||| Sbjct: 1101 ggctaaggccaaggcgaagcc 1121
>ref|NM_001058540.1| Oryza sativa (japonica cultivar-group) Os04g0105000 (Os04g0105000) mRNA, complete cds Length = 3151 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 660 cgccaagaaggcccgcaaggtcgccgccg 688 |||||||||| ||||||||||||||||| Sbjct: 393 cgccaagaagctccgcaaggtcgccgccg 421
>emb|AM167904.1| Bordetella avium 197N complete genome Length = 3732255 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 670 gcccgcaaggtcgccgccgcc 690 ||||||||||||||||||||| Sbjct: 1847882 gcccgcaaggtcgccgccgcc 1847902
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 ccgcgcgtccgcctccaagggcaag 348 ||||||||||||| ||||||||||| Sbjct: 3868524 ccgcgcgtccgccgccaagggcaag 3868548
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 668 aggcccgcaaggtcgccgccg 688 ||||||||||||||||||||| Sbjct: 189766 aggcccgcaaggtcgccgccg 189746 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 580 aagaagaagctggtcgccaaggcgaagaa 608 ||||| |||||||||| |||||||||||| Sbjct: 1532396 aagaacaagctggtcgacaaggcgaagaa 1532424
>gb|AY389688.1| Hyacinthus orientalis histone H1 (H15) mRNA, partial cds Length = 667 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 atcgccaagtacattgaggagaagcacgg 278 |||||||||||||| |||| ||||||||| Sbjct: 182 atcgccaagtacatggaggggaagcacgg 210
>gb|AC105743.8| Oryza sativa chromosome 3 BAC OSJNBa0035N15 genomic sequence, complete sequence Length = 171120 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 aagaccgccgccgccgccggc 558 ||||||||||||||||||||| Sbjct: 40125 aagaccgccgccgccgccggc 40145
>gb|AF139593.2| Xanthobacter autotrophicus outer membrane receptor-like protein gene, partial cds; and methylene tetrahydromethanopterin dehydrogenase (mtdB), methenyl tetrahydromethanopterin cyclohydrolase (mch), putative tetrahydromethanopterin biosynthesis protein, conserved hypothetical protein, putative tetrahydromethanopterin biosynthesis protein, putative cytochrome C protein, formyltransferase/cyclohydrolase complex subunit C (fhcC), formyltransferase/cyclohydrolase complex subunit D (fhcD), formyltransferase/cyclohydrolase complex subunit A (fhcA), formyltransferase/cyclohydrolase complex subunit B (fhcB), conserved hypothetical protein, and putative protein genes, complete cds Length = 13310 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 ggcgaagaagtcgccggcggc 620 ||||||||||||||||||||| Sbjct: 3314 ggcgaagaagtcgccggcggc 3294
>gb|AF352248.1| Pisum sativum histone H1 (His1) gene, His1-1 allele, partial cds Length = 1003 Score = 42.1 bits (21), Expect = 3.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 ggcaagctcgtcaaggtcaaggcatcctacaag 375 ||||||||||||||||| ||||| || |||||| Sbjct: 428 ggcaagctcgtcaaggttaaggcctcttacaag 460
>gb|AF352247.1| Pisum sativum histone H1 (His1) gene, His1-3 allele, partial cds Length = 970 Score = 42.1 bits (21), Expect = 3.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 ggcaagctcgtcaaggtcaaggcatcctacaag 375 ||||||||||||||||| ||||| || |||||| Sbjct: 428 ggcaagctcgtcaaggttaaggcctcttacaag 460
>gb|AF352246.1| Pisum sativum histone H1 (His1) gene, His1-2 allele, partial cds Length = 988 Score = 42.1 bits (21), Expect = 3.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 ggcaagctcgtcaaggtcaaggcatcctacaag 375 ||||||||||||||||| ||||| || |||||| Sbjct: 428 ggcaagctcgtcaaggttaaggcctcttacaag 460
>ref|XM_390445.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG10269.1) partial mRNA Length = 3345 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 aaggcggacgcgaagcccaag 537 ||||||||||||||||||||| Sbjct: 2296 aaggcggacgcgaagcccaag 2316
>gb|AY263168.1| Takifugu rubripes Tmc2-related protein 2 mRNA, partial cds Length = 1977 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 576 ggagaagaagaagctggtcgc 596 ||||||||||||||||||||| Sbjct: 60 ggagaagaagaagctggtcgc 80
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 ggcgaagaagtcgccggcggc 620 ||||||||||||||||||||| Sbjct: 1339814 ggcgaagaagtcgccggcggc 1339794
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 526 gcgaagcccaagaagaccgccgccg 550 |||||||||||| |||||||||||| Sbjct: 1916961 gcgaagcccaagcagaccgccgccg 1916985
>gb|AF514418.1| Pisum fulvum histone H1 (His1) gene, partial cds Length = 985 Score = 42.1 bits (21), Expect = 3.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 ggcaagctcgtcaaggtcaaggcatcctacaag 375 ||||||||||||||||| ||||| || |||||| Sbjct: 428 ggcaagctcgtcaaggttaaggcctcttacaag 460
>gb|AF514417.1| Pisum sativum subsp. abyssinicum histone H1 (His1) gene, partial cds Length = 985 Score = 42.1 bits (21), Expect = 3.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 ggcaagctcgtcaaggtcaaggcatcctacaag 375 ||||||||||||||||| ||||| || |||||| Sbjct: 428 ggcaagctcgtcaaggttaaggcctcttacaag 460
>ref|NM_001028967.1| Caenorhabditis elegans T13F3.8 (T13F3.8) mRNA, complete cds Length = 639 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 512 agaagaaggcggacgcgaagcccaagaag 540 ||||||||| ||||| ||||||||||||| Sbjct: 452 agaagaaggaggacgagaagcccaagaag 480
>ref|XM_797205.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053463297.10) partial mRNA Length = 620 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 accgccgccgccgccggcacg 561 ||||||||||||||||||||| Sbjct: 314 accgccgccgccgccggcacg 294
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 aagaccgccgccgccgccggc 558 ||||||||||||||||||||| Sbjct: 6387085 aagaccgccgccgccgccggc 6387065 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 aagaccgccgccgccgccggc 558 ||||||||||||||||||||| Sbjct: 19401287 aagaccgccgccgccgccggc 19401307
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 aagaccgccgccgccgccggc 558 ||||||||||||||||||||| Sbjct: 18734132 aagaccgccgccgccgccggc 18734112
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 197 tcaaggaggcgatcgcggcgctcaaggac 225 ||||||||||||||| |||||||| |||| Sbjct: 54987 tcaaggaggcgatcgaggcgctcagggac 54959
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 660 cgccaagaaggcccgcaaggtcgccgccg 688 |||||||||| ||||||||||||||||| Sbjct: 108033 cgccaagaagctccgcaaggtcgccgccg 108061
>emb|AL627282.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 18/20 Length = 234050 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 aaggccaaggcgaagccgaagaccg 646 |||||||| |||||||||||||||| Sbjct: 40608 aaggccaaagcgaagccgaagaccg 40632
>gb|AF300703.1|AF300703 Oryctolagus cuniculus parathyroid hormone-related protein (PTHrP) mRNA, complete cds Length = 534 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 561 gaagcgcaaggcgccggagaagaagaagc 589 ||||||||||| || |||||||||||||| Sbjct: 393 gaagcgcaaggagcaggagaagaagaagc 421
>dbj|AB021873.1| Pisum sativum RSP mRNA for ribosome-sedimenting protein, complete cds Length = 1186 Score = 42.1 bits (21), Expect = 3.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 ggcaagctcgtcaaggtcaaggcatcctacaag 375 ||||||||||||||||| ||||| || |||||| Sbjct: 420 ggcaagctcgtcaaggttaaggcctcttacaag 452
>dbj|AB021872.1| Pisum sativum mRNA for ribosome-sedimenting protein, partial cds Length = 1079 Score = 42.1 bits (21), Expect = 3.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 ggcaagctcgtcaaggtcaaggcatcctacaag 375 ||||||||||||||||| ||||| || |||||| Sbjct: 331 ggcaagctcgtcaaggttaaggcctcttacaag 363
>dbj|AP003880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1123_G08 Length = 146944 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 aagaccgccgccgccgccggc 558 ||||||||||||||||||||| Sbjct: 37581 aagaccgccgccgccgccggc 37561
>dbj|AK120156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030B09, full insert sequence Length = 3151 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 660 cgccaagaaggcccgcaaggtcgccgccg 688 |||||||||| ||||||||||||||||| Sbjct: 395 cgccaagaagctccgcaaggtcgccgccg 423
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 aaggccaaggcgaagccgaagaccg 646 |||||||| |||||||||||||||| Sbjct: 4263258 aaggccaaagcgaagccgaagaccg 4263282
>emb|Z93389.1|CET13F3 Caenorhabditis elegans Cosmid T13F3, complete sequence Length = 22340 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 512 agaagaaggcggacgcgaagcccaagaag 540 ||||||||| ||||| ||||||||||||| Sbjct: 16899 agaagaaggaggacgagaagcccaagaag 16927
>gb|AC002364.1|AC002364 Homo sapiens Xp22 Cosmids U15E4, U115H5, U132E12, U115B9 (Lawrence Livermore human cosmid library) complete sequence Length = 120703 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 837 tcaagtctatgaagttgtttg 857 ||||||||||||||||||||| Sbjct: 8 tcaagtctatgaagttgtttg 28
>gb|AC002359.1|AC002359 Homo sapiens Xp22 Cosmid U239B3 (from Lawrence Livermore X library) complete sequence Length = 16699 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 837 tcaagtctatgaagttgtttg 857 ||||||||||||||||||||| Sbjct: 293 tcaagtctatgaagttgtttg 273
>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109555 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 aagaccgccgccgccgccggc 558 ||||||||||||||||||||| Sbjct: 48633 aagaccgccgccgccgccggc 48613
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 aagaccgccgccgccgccggc 558 ||||||||||||||||||||| Sbjct: 78981 aagaccgccgccgccgccggc 79001
>dbj|D87065.1| Triticum aestivum gene for histone H1, complete cds, clone:TH325 Length = 2541 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 354 caaggtcaaggcatcctacaagctc 378 |||||||||||| |||||||||||| Sbjct: 1354 caaggtcaaggcctcctacaagctc 1378
>gb|M90412.1|STMHRDC Streptomyces aureofaciens principal sigma- like factor (hrdC) gene, complete cds Length = 1965 Score = 42.1 bits (21), Expect = 3.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 658 gccgccaagaaggcccgcaaggtcgccgccgcc 690 |||||||||||| ||||||||| ||||||||| Sbjct: 363 gccgccaagaagccccgcaaggcggccgccgcc 395 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 116,778,112 Number of extensions: 7790764 Number of successful extensions: 332632 Number of sequences better than 10.0: 89 Number of HSP's gapped: 332618 Number of HSP's successfully gapped: 120 Length of query: 881 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 859 Effective length of database: 18,508,616,841 Effective search space: 15898901866419 Effective search space used: 15898901866419 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)