ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf14h13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK104061:Os02g0721700 224 6e-59
2AK061514:Os02g0721700 224 6e-59
3AK064738:Os09g0297800 152 4e-37
4AK100772:Os06g0303800 110 2e-24
5AK107058:Os02g0541900 79 4e-15
6AK121460:Os04g0500300 69 4e-12
7Os12g0429600:Os12g0429600 32 0.78
8AK102046:Os04g0689400 30 3.0
9Os11g0170300:Os11g0170300 29 6.6
10AK107398:Os01g0596100 29 6.6

>AK104061:Os02g0721700 |
          Length = 167
 Score =  224 bits (572), Expect = 6e-59
 Identities = 107/142 (75%), Positives = 124/142 (87%), Gaps = 1/142 (0%)
 Frame = +2

Query: 380 FISDGVFQATAGSTTGRALLQAKRDCPVNFEFQNYTVITSRCKGPKYPAKDCCDSFKEFA 559
           FISD VF  + GST GR+LLQAK++CPVNFEFQNYT+ITS+CKGP++PAK CCD+FKEFA
Sbjct: 26  FISDSVFLGSVGST-GRSLLQAKKNCPVNFEFQNYTIITSKCKGPRFPAKQCCDAFKEFA 84

Query: 560 CPFNTYINDESNDCASTMFSYINLYGKYPPGLFAHECREGKLGLACDGVPQKD-VVANGV 736
           CPFN YINDESNDCASTMFSYINLYGKYPPGLFA+ECREGKLGL+C+GV QKD VV++  
Sbjct: 85  CPFNEYINDESNDCASTMFSYINLYGKYPPGLFANECREGKLGLSCEGVSQKDSVVSSAG 144

Query: 737 QRARSSSLALITFMCGLVALFF 802
           Q+A+SS LA I    GL AL+F
Sbjct: 145 QQAQSSLLAFIMLTFGLAALWF 166



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>AK061514:Os02g0721700 |
          Length = 167

 Score =  224 bits (572), Expect = 6e-59
 Identities = 107/142 (75%), Positives = 124/142 (87%), Gaps = 1/142 (0%)
 Frame = +2

Query: 380 FISDGVFQATAGSTTGRALLQAKRDCPVNFEFQNYTVITSRCKGPKYPAKDCCDSFKEFA 559
           FISD VF  + GST GR+LLQAK++CPVNFEFQNYT+ITS+CKGP++PAK CCD+FKEFA
Sbjct: 26  FISDSVFLGSVGST-GRSLLQAKKNCPVNFEFQNYTIITSKCKGPRFPAKQCCDAFKEFA 84

Query: 560 CPFNTYINDESNDCASTMFSYINLYGKYPPGLFAHECREGKLGLACDGVPQKD-VVANGV 736
           CPFN YINDESNDCASTMFSYINLYGKYPPGLFA+ECREGKLGL+C+GV QKD VV++  
Sbjct: 85  CPFNEYINDESNDCASTMFSYINLYGKYPPGLFANECREGKLGLSCEGVSQKDSVVSSAG 144

Query: 737 QRARSSSLALITFMCGLVALFF 802
           Q+A+SS LA I    GL AL+F
Sbjct: 145 QQAQSSLLAFIMLTFGLAALWF 166



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>AK064738:Os09g0297800 |
          Length = 174

 Score =  152 bits (384), Expect = 4e-37
 Identities = 75/133 (56%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
 Frame = +2

Query: 380 FISDGVFQATAGST--TGRALLQAKRDCPVNFEFQNYTVITSRCKGPKYPAKDCCDSFKE 553
           FIS+    A++ ++   GR+LLQAK+DCPVNFE  NYTVITSRCKGP YP   CC + K+
Sbjct: 25  FISNEAVGASSAASGGAGRSLLQAKKDCPVNFEEANYTVITSRCKGPMYPPALCCQALKD 84

Query: 554 FACPFNTYINDESNDCASTMFSYINLYGKYPPGLFAHECREGKLGLAC-DGVPQKDVVAN 730
            ACPF  YIND    CA++MFSYINLYGKYPPGLFA+ C+EG  GL C +  PQ   +  
Sbjct: 85  LACPFTAYINDAQTTCAASMFSYINLYGKYPPGLFANTCKEGANGLECPEDTPQ---MKP 141

Query: 731 GVQRARSSSLALI 769
           G  +A SS+ A++
Sbjct: 142 GEDKAASSAAAIV 154



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>AK100772:Os06g0303800 |
          Length = 137

 Score =  110 bits (274), Expect = 2e-24
 Identities = 50/85 (58%), Positives = 63/85 (74%)
 Frame = +2

Query: 416 STTGRALLQAKRDCPVNFEFQNYTVITSRCKGPKYPAKDCCDSFKEFACPFNTYINDESN 595
           S   R+LLQAK  CPV+FE QNYT ITS+CK P +PA  CC +  EFAC F+ YINDES 
Sbjct: 4   SMNRRSLLQAKGGCPVSFENQNYTTITSKCKSP-WPADLCCPALNEFACNFSQYINDEST 62

Query: 596 DCASTMFSYINLYGKYPPGLFAHEC 670
           +CA +M+ Y+N +G YP GLF++EC
Sbjct: 63  NCAESMWVYLNAHGSYPAGLFSNEC 87



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>AK107058:Os02g0541900 |
          Length = 147

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
 Frame = +2

Query: 455 CPVNFEFQN--YTVITSRCKGPKYPAKDCCDSFKEFACPFNTYINDESNDCASTMFSYIN 628
           CPV F+     +T +  +CK       +CCD+FKE ACP NT +ND +N C   MF +I+
Sbjct: 67  CPVRFDEMKGPFTELGKKCKAAS--VTECCDAFKEIACPHNTLLNDLNNGCGDDMFYFIH 124

Query: 629 LYGKYPPGLFAHECREGKLGLAC 697
            YG+ PPG    +C EG  G+ C
Sbjct: 125 TYGRLPPGTIFKKCVEGPYGMKC 147



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>AK121460:Os04g0500300 |
          Length = 152

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 34/81 (41%), Positives = 42/81 (51%)
 Frame = +2

Query: 455 CPVNFEFQNYTVITSRCKGPKYPAKDCCDSFKEFACPFNTYINDESNDCASTMFSYINLY 634
           CPV F+      I    K      K CC++FK FACP N  IND +N CA  MF  I+ Y
Sbjct: 72  CPVRFDKMKGPAIELGKKCKTTGVKVCCEAFKTFACPHNKLINDVNNGCADEMFYTIHTY 131

Query: 635 GKYPPGLFAHECREGKLGLAC 697
           G+  PG    +C EG  G+ C
Sbjct: 132 GQLLPGTIFKKCLEGPHGMKC 152



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>Os12g0429600:Os12g0429600 |
          Length = 1597

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 118  STARPPAPWSLQAPARRVEARTWVGLRAPSTS 213
            +T  PPAPW    P R    R  +G R PST+
Sbjct: 1016 ATPSPPAPWFAAVPTRPRSVRGQIGPRPPSTT 1047



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>AK102046:Os04g0689400 |
          Length = 673

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 452 DCPVNFEFQNYTVITSRCKGPKYPAKDCCDSFKEF 556
           DCP++F + N+T+ ++ C  P   A  CC     F
Sbjct: 33  DCPLDFSWANFTLASAACSDPTQRAA-CCRYINAF 66



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>Os11g0170300:Os11g0170300 |
          Length = 593

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 540 ILSRNLHARLIHTSMMKAMTVHPQCSATSTSM 635
           ++++NL   L H    K MT HP+C+   TS+
Sbjct: 293 VVTQNLSPELTHVE--KVMTAHPECATLDTSI 322



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>AK107398:Os01g0596100 |
          Length = 520

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
 Frame = +3

Query: 120 HRPPARSVELTSTSEESRGAHVGGSARAVHLLH----------HRHQATVVVLDPTAFAL 269
           H  P R VELTST+  +R A  G  AR +HLL           +R +   V L  T FAL
Sbjct: 144 HPGPFRYVELTSTAMGAR-ARRGDLARWLHLLAVKGVRELVFVNRRRPLDVALPATVFAL 202

Query: 270 DFLS 281
             LS
Sbjct: 203 APLS 206


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 30,173,161
Number of extensions: 688718
Number of successful extensions: 2445
Number of sequences better than 10.0: 10
Number of HSP's gapped: 2442
Number of HSP's successfully gapped: 10
Length of query: 360
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 258
Effective length of database: 11,315,673
Effective search space: 2919443634
Effective search space used: 2919443634
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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