ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf14h13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9BUT9:CP014_HUMAN Uncharacterized protein C16orf14 - Homo sapie... 33 2.0
2P78316:NOP14_HUMAN Nucleolar protein 14 - Homo sapiens (Human) 33 2.7
3Q8NFM4:ADCY4_HUMAN Adenylate cyclase type 4 - Homo sapiens (Human) 32 3.5
4P26770:ADCY4_RAT Adenylate cyclase type 4 - Rattus norvegicus (Rat) 32 4.6
5Q91WF3:ADCY4_MOUSE Adenylate cyclase type 4 - Mus musculus (Mouse) 32 4.6
6O16887:YCTG2_CAEEL Uncharacterized protein C29G2.6 - Caenorhabdi... 31 7.8

>Q9BUT9:CP014_HUMAN Uncharacterized protein C16orf14 - Homo sapiens (Human)|
          Length = 160
 Score = 33.1 bits (74), Expect = 2.0
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 124 ARPPAPWSLQAPARRVEARTWVGLRAPSTS 213
           A+PP PW L +P  R+      G RAPSTS
Sbjct: 51  AQPPGPWPLSSPGPRLVFNRVNGRRAPSTS 80



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>P78316:NOP14_HUMAN Nucleolar protein 14 - Homo sapiens (Human)|
          Length = 857

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = +3

Query: 603 HPQ-----CSATSTSMASTHQACLPMSAEKAS*VLLVMVSPR 713
           HPQ     C +T T M S  Q C P++ EK+  V L + +PR
Sbjct: 728 HPQELQELCQSTLTEMESQKQLCRPLTCEKSKPVPLKLFTPR 769



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>Q8NFM4:ADCY4_HUMAN Adenylate cyclase type 4 - Homo sapiens (Human)|
          Length = 1077

 Score = 32.3 bits (72), Expect = 3.5
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +3

Query: 864  IHCCHLRRS*NFPSCNLVI*SYVRLHILSILIWL-PT*NLLIVAVSYLSHCIMSHSYI 1034
            +HCC L     F SC+L +     L +L +L+WL  + +L + + ++LS C++   Y+
Sbjct: 722  MHCCTL----GFLSCSLFLHMSFELKLLLLLLWLAASCSLFLHSHAWLSECLIVRLYL 775



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>P26770:ADCY4_RAT Adenylate cyclase type 4 - Rattus norvegicus (Rat)|
          Length = 1064

 Score = 32.0 bits (71), Expect = 4.6
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 864  IHCCHLRRS*NFPSCNLVI*SYVRLHILSILIWL-PT*NLLIVAVSYLSHCIMSHSY 1031
            +HCC L     F SC+L +     L +L +L+WL  + +L + + ++LS C+++  Y
Sbjct: 719  MHCCVL----GFLSCSLFLHMSFELKLLLLLLWLVASCSLFLHSHAWLSDCLIARLY 771



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>Q91WF3:ADCY4_MOUSE Adenylate cyclase type 4 - Mus musculus (Mouse)|
          Length = 1077

 Score = 32.0 bits (71), Expect = 4.6
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 864  IHCCHLRRS*NFPSCNLVI*SYVRLHILSILIWL-PT*NLLIVAVSYLSHCIMSHSY 1031
            +HCC L     F SC+L +     L +L +L+WL  + +L + + ++LS C+++  Y
Sbjct: 724  MHCCVL----GFLSCSLFLHMSFELKLLLLLLWLVASCSLFLHSHAWLSDCLIARLY 776



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>O16887:YCTG2_CAEEL Uncharacterized protein C29G2.6 - Caenorhabditis elegans|
          Length = 202

 Score = 31.2 bits (69), Expect = 7.8
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +2

Query: 428 RALLQAKRDCPVNFEFQNYTVITSRCKGPKYPAK--DCCDSFKEFACPFNTYINDESNDC 601
           R LLQ    C +  +  N  V++    G    A+  D  D + ++ C F T   DE NDC
Sbjct: 28  RDLLQ----CSIQKKCVNLPVLSKLVDGKNISAEMYDDIDKYTDYGCIFTTGCQDECNDC 83

Query: 602 ASTMFSYINL 631
              + S + +
Sbjct: 84  PLCLTSKLQI 93


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 174,118,882
Number of extensions: 3639771
Number of successful extensions: 9405
Number of sequences better than 10.0: 6
Number of HSP's gapped: 9402
Number of HSP's successfully gapped: 6
Length of query: 360
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 246
Effective length of database: 69,416,809
Effective search space: 17076535014
Effective search space used: 17076535014
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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