ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf17f16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073601:Os03g0243300 | 487 | e-138 | 2 | AB037151:Os03g0243300 | 487 | e-138 | 3 | AB010740:Os03g0243300 | 487 | e-138 | 4 | Os10g0141400:Os10g0141400 | 246 | 3e-65 | 5 | AK071683:Os08g0561500 | 39 | 0.014 | 6 | AK102722:Os07g0507200 | 32 | 1.3 | 7 | AY224503:Os07g0673400 | 32 | 1.7 | 8 | AK119331:Os11g0605900 | 31 | 2.8 | 9 | AK066705:Os04g0530300 | 31 | 2.8 | 10 | Os03g0175900:Os03g0175900 | 30 | 3.7 | 11 | AK107797:Os05g0164200 | 30 | 4.8 | 12 | AK108272:Os09g0503100 | 30 | 4.8 | 13 | AK121464:Os01g0126200 | 30 | 6.3 | 14 | Os07g0513100:Os07g0513100 | 29 | 8.2 | 15 | AK102333:Os12g0271600 | 29 | 8.2 | 16 | AK070395:Os12g0271600 | 29 | 8.2 |
|---|
>AK073601:Os03g0243300 | Length = 402 Score = 487 bits (1254), Expect = e-138 Identities = 277/405 (68%), Positives = 290/405 (71%), Gaps = 6/405 (1%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 MVLE+TMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 60 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VLVTPTSDLGKILACMHGLEVG KHRQNKRQQQRII FIGSPVKY Sbjct: 61 VLVTPTSDLGKILACMHGLEVGAEANLAAAIQVAQLALKHRQNKRQQQRIIAFIGSPVKY 120 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSDSSHIVHVPPGDHAL 642 DKKVLETIGKKLKKNNVALD+VDFGETDD+KPEKLEALI+AVNSSDSSHIVHVPPG++AL Sbjct: 121 DKKVLETIGKKLKKNNVALDIVDFGETDDDKPEKLEALISAVNSSDSSHIVHVPPGENAL 180 Query: 643 SDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEERAR 822 SDVLISTPI ++F VDPNVDPELALALRLSMEEERAR Sbjct: 181 SDVLISTPIFTGEEGGSGFAASAAAAAATGAAGFEFDVDPNVDPELALALRLSMEEERAR 240 Query: 823 QEAIAKKAAE-----DNKDQASSS-TDAIMAEAELTLNAPXXXXXXXXXXXXXXXXXXXX 984 QEAIAKKAAE +NKD ASSS D++MAEAE NA Sbjct: 241 QEAIAKKAAEESSGAENKDHASSSNADSVMAEAEPASNA-ADDKKDQPKEDDDAQLLQQA 299 Query: 985 XXMSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQDAEASGQSDMSKVFEDRSFVT 1164 MSM VQDA S QSDMSKVFEDRSFVT Sbjct: 300 LAMSM-EEGSSGAAAADAAMAEAAVDDQDLALALQMSVQDAGGSSQSDMSKVFEDRSFVT 358 Query: 1165 SILNSLPGVDPNDPSVKDLLASLHGQGEQE*KDEADKTDKPEDGK 1299 SILNSLPGVDPNDPSVKDLLASLHGQGEQE K+ DK+DKPED K Sbjct: 359 SILNSLPGVDPNDPSVKDLLASLHGQGEQEKKE--DKSDKPEDEK 401
>AB037151:Os03g0243300 | Length = 402 Score = 487 bits (1254), Expect = e-138 Identities = 277/405 (68%), Positives = 290/405 (71%), Gaps = 6/405 (1%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 MVLE+TMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 60 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VLVTPTSDLGKILACMHGLEVG KHRQNKRQQQRII FIGSPVKY Sbjct: 61 VLVTPTSDLGKILACMHGLEVGAEANLAAAIQVAQLALKHRQNKRQQQRIIAFIGSPVKY 120 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSDSSHIVHVPPGDHAL 642 DKKVLETIGKKLKKNNVALD+VDFGETDD+KPEKLEALI+AVNSSDSSHIVHVPPG++AL Sbjct: 121 DKKVLETIGKKLKKNNVALDIVDFGETDDDKPEKLEALISAVNSSDSSHIVHVPPGENAL 180 Query: 643 SDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEERAR 822 SDVLISTPI ++F VDPNVDPELALALRLSMEEERAR Sbjct: 181 SDVLISTPIFTGEEGGSGFAASAAAAAATGAAGFEFDVDPNVDPELALALRLSMEEERAR 240 Query: 823 QEAIAKKAAE-----DNKDQASSS-TDAIMAEAELTLNAPXXXXXXXXXXXXXXXXXXXX 984 QEAIAKKAAE +NKD ASSS D++MAEAE NA Sbjct: 241 QEAIAKKAAEESSGAENKDHASSSNADSVMAEAEPASNA-ADDKKDQPKEDDDAQLLQQA 299 Query: 985 XXMSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQDAEASGQSDMSKVFEDRSFVT 1164 MSM VQDA S QSDMSKVFEDRSFVT Sbjct: 300 LAMSM-EEGSSGAAAADAAMAEAAVDDQDLALALQMSVQDAGGSSQSDMSKVFEDRSFVT 358 Query: 1165 SILNSLPGVDPNDPSVKDLLASLHGQGEQE*KDEADKTDKPEDGK 1299 SILNSLPGVDPNDPSVKDLLASLHGQGEQE K+ DK+DKPED K Sbjct: 359 SILNSLPGVDPNDPSVKDLLASLHGQGEQEKKE--DKSDKPEDEK 401
>AB010740:Os03g0243300 | Length = 402 Score = 487 bits (1254), Expect = e-138 Identities = 277/405 (68%), Positives = 290/405 (71%), Gaps = 6/405 (1%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 MVLE+TMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 60 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VLVTPTSDLGKILACMHGLEVG KHRQNKRQQQRII FIGSPVKY Sbjct: 61 VLVTPTSDLGKILACMHGLEVGAEANLAAAIQVAQLALKHRQNKRQQQRIIAFIGSPVKY 120 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSDSSHIVHVPPGDHAL 642 DKKVLETIGKKLKKNNVALD+VDFGETDD+KPEKLEALI+AVNSSDSSHIVHVPPG++AL Sbjct: 121 DKKVLETIGKKLKKNNVALDIVDFGETDDDKPEKLEALISAVNSSDSSHIVHVPPGENAL 180 Query: 643 SDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEERAR 822 SDVLISTPI ++F VDPNVDPELALALRLSMEEERAR Sbjct: 181 SDVLISTPIFTGEEGGSGFAASAAAAAATGAAGFEFDVDPNVDPELALALRLSMEEERAR 240 Query: 823 QEAIAKKAAE-----DNKDQASSS-TDAIMAEAELTLNAPXXXXXXXXXXXXXXXXXXXX 984 QEAIAKKAAE +NKD ASSS D++MAEAE NA Sbjct: 241 QEAIAKKAAEESSGAENKDHASSSNADSVMAEAEPASNA-ADDKKDQPKEDDDAQLLQQA 299 Query: 985 XXMSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQDAEASGQSDMSKVFEDRSFVT 1164 MSM VQDA S QSDMSKVFEDRSFVT Sbjct: 300 LAMSM-EEGSSGAAAADAAMAEAAVDDQDLALALQMSVQDAGGSSQSDMSKVFEDRSFVT 358 Query: 1165 SILNSLPGVDPNDPSVKDLLASLHGQGEQE*KDEADKTDKPEDGK 1299 SILNSLPGVDPNDPSVKDLLASLHGQGEQE K+ DK+DKPED K Sbjct: 359 SILNSLPGVDPNDPSVKDLLASLHGQGEQEKKE--DKSDKPEDEK 401
>Os10g0141400:Os10g0141400 | Length = 550 Score = 246 bits (628), Expect = 3e-65 Identities = 147/276 (53%), Positives = 173/276 (62%), Gaps = 6/276 (2%) Frame = +1 Query: 109 LESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVRVL 288 LE+T+IC+D+SEWMRNGDY P+R QAQ DA NL+ G K SNPENTVGV+ MAG VRVL Sbjct: 5 LEATVICVDDSEWMRNGDYPPTRLQAQEDAANLVVGTKMTSNPENTVGVLAMAGDRVRVL 64 Query: 289 VTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKYDK 468 + PTSD K LACMHGLE K+R +KR QRI+VF+GSPVK +K Sbjct: 65 LAPTSDPVKFLACMHGLEASGEANLTATLNIAELVLKNRPDKRLSQRIVVFVGSPVKDEK 124 Query: 469 KVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSDSSHIVHVPPGDHALSD 648 LETIGKKLKK NV+LDVV+FGE+DDEKPEKLEAL+AAV SSHIVH+PPG+ L Sbjct: 125 --LETIGKKLKKYNVSLDVVEFGESDDEKPEKLEALVAAVGG--SSHIVHIPPGED-LRA 179 Query: 649 VLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEERARQE 828 VL +TPI Y++ VDPNVDPE A ALRLS E ARQE Sbjct: 180 VLANTPI--------ITGDEGGGAAAGGASRYEYNVDPNVDPEFAEALRLS---EIARQE 228 Query: 829 AIAKKAA------EDNKDQASSSTDAIMAEAELTLN 918 A A A+ + N D + T + A T N Sbjct: 229 AAADGASRYEYSVDPNADPELAETFRLAAGEPSTSN 264
>AK071683:Os08g0561500 | Length = 421 Score = 38.5 bits (88), Expect = 0.014 Identities = 36/104 (34%), Positives = 41/104 (39%), Gaps = 20/104 (19%) Frame = +3 Query: 72 RLQRDPQRRNH----GARVDDDLHRQLGVDAERRLLAVPLPGAGRRRQPHLRRQ------ 221 R P RR H G R D +HRQ G + A P PG G PH RR+ Sbjct: 262 RALHHPLRRIHRVGGGVRGADMVHRQGGPGVRGGVSARPDPGGGHHGLPHPRRELLPRRH 321 Query: 222 --------DPV-EPGEYGGRHDDGRQGRARACH-PHQRPRQDPR 323 P+ P R RQGR R CH P +RP D R Sbjct: 322 HRRRLHHRRPLPRPLGQEPRACSPRQGRRRHCHRPRRRPLPDHR 365
>AK102722:Os07g0507200 | Length = 477 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = -2 Query: 306 VAGGGDKHAHALAGHRHDAHRILRVRLGLGAADEVDGVGLRLEAGRRVVAVPHPLRVVYA 127 +AG + A+ HR D+H + V + AA+ V + E+G R +A+PH + + Sbjct: 294 LAGSTEMSLSAMRKHRDDSHSLKEVTHYISAAEMVK----KFESGTRELAIPHNRSLSHE 349 Query: 126 D 124 D Sbjct: 350 D 350
>AY224503:Os07g0673400 | Length = 173 Score = 31.6 bits (70), Expect = 1.7 Identities = 29/74 (39%), Positives = 32/74 (43%), Gaps = 19/74 (25%) Frame = +3 Query: 126 LHRQLGVD-AERRLLAVPLP--------GAGRRRQPHLRRQDPVEPGEYGG--------- 251 LHRQ GVD +RR V G RRRQP LRR PGE Sbjct: 89 LHRQRGVDRGDRRGAQVRAVQRGGEAQRGVARRRQPWLRRNQEGLPGERQRLLRPPRALL 148 Query: 252 RHD-DGRQGRARAC 290 RHD QG+A +C Sbjct: 149 RHDRQATQGQALSC 162
>AK119331:Os11g0605900 | Length = 260 Score = 30.8 bits (68), Expect = 2.8 Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = +3 Query: 138 LGVDAERRLLAVPL-PGAGRRRQPHLRRQDPVEPGEYGGRHDDGRQGRARACHPHQRP 308 LG RR P P AGRRR PH R + P G R +GRQ R P QRP Sbjct: 115 LGAPGHRRQGRRPQEPRAGRRRAPHEVRCEGPRPA--GRREREGRQ--IRPFLPRQRP 168
>AK066705:Os04g0530300 | Length = 357 Score = 30.8 bits (68), Expect = 2.8 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Frame = +3 Query: 192 RRRQPHLRRQDPVEPGEYGGRHDDGRQGRARACHPHQRPRQDPRLYARAGSWS*SKLGC- 368 RR + ++ + G D G + + R +R R+ A +GS S S+ Sbjct: 52 RREEEEEEEEEEGDAGSESSGEDSGERRKRRRKEKERRHRRRRSRSASSGSSSESESESE 111 Query: 369 -SYSGCSAGSQASPE*E 416 SYS CSAGS++ + E Sbjct: 112 SSYSDCSAGSESETDSE 128
>Os03g0175900:Os03g0175900 | Length = 274 Score = 30.4 bits (67), Expect = 3.7 Identities = 31/94 (32%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Frame = +3 Query: 84 DPQRRNHGARVD-DDLHRQLGVDAERRLLAVPLPGAGRRRQPHLRRQDPVEPGEYGGRH- 257 D +RR G RV + H L + A RR LA G GRR RR + PG GR Sbjct: 73 DHRRRRQGLRVAVQEPHGPLRLPARRRRLAQAGAGVGRR-----RRARGLRPGRRRGRRG 127 Query: 258 ------DDGRQGRARACHPHQRPRQDPRLYARAG 341 +DG + A R + P L A G Sbjct: 128 RRALAGEDGVEEAREARAGGSRLAEVPELGAYGG 161
>AK107797:Os05g0164200 | Length = 178 Score = 30.0 bits (66), Expect = 4.8 Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Frame = +3 Query: 129 HRQLGVDAERRLLAVPL----PGAGRRRQPHLRRQDPVEPGEYGGRHDDGRQGRAR 284 HR LG RR A PL P A RRR+ RR+ P G D GRQ RAR Sbjct: 34 HRALGGHRVRRR-APPLRPVSPAAARRRRRRRRRRQPSRAAPPG---DPGRQLRAR 85
>AK108272:Os09g0503100 | Length = 346 Score = 30.0 bits (66), Expect = 4.8 Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = -2 Query: 330 HTGEDLAEVAGGGDKHAHALAGHRHDAHRILRVRLGLGAADEVD-----GVGLRLEAGRR 166 H LA++AG H A G R+ A VR GLGA + +D G LR +GRR Sbjct: 181 HYAVQLAKLAG---LHVTATCGARNLAF----VRDGLGADEALDYRTPDGAALRSPSGRR 233 Query: 165 VVAVPH 148 AV H Sbjct: 234 YDAVAH 239
>AK121464:Os01g0126200 | Length = 585 Score = 29.6 bits (65), Expect = 6.3 Identities = 25/86 (29%), Positives = 32/86 (37%) Frame = +3 Query: 78 QRDPQRRNHGARVDDDLHRQLGVDAERRLLAVPLPGAGRRRQPHLRRQDPVEPGEYGGRH 257 +R P RR R+ L R + R A+ + G R QP RQ V +G Sbjct: 120 RRPPPRRRAALRLRRALARLVHRRLRRHRAALLVAGGVRVPQPAASRQPLVPRPRHGA-- 177 Query: 258 DDGRQGRARACHPHQRPRQDPRLYAR 335 HP Q PR+ PR R Sbjct: 178 -----------HPRQHPRRPPRRVPR 192
>Os07g0513100:Os07g0513100 | Length = 1031 Score = 29.3 bits (64), Expect = 8.2 Identities = 21/63 (33%), Positives = 30/63 (47%) Frame = +3 Query: 162 LLAVPLPGAGRRRQPHLRRQDPVEPGEYGGRHDDGRQGRARACHPHQRPRQDPRLYARAG 341 L A+ + RR+ R + P PG GGR GR+ R RAC ++P+ R Sbjct: 20 LAALAVAALLHRRRRRGRARAPASPGLLGGRR--GRRPR-RACEEEEKPQARFRRVVADN 76 Query: 342 SWS 350 S+S Sbjct: 77 SYS 79
>AK102333:Os12g0271600 | Length = 461 Score = 29.3 bits (64), Expect = 8.2 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 2/51 (3%) Frame = +1 Query: 775 ELALALR-LSMEEERARQEA-IAKKAAEDNKDQASSSTDAIMAEAELTLNA 921 +L LAL+ LS E + A QEA + +K+A D +D+A ++ A +AEAE L + Sbjct: 204 DLMLALQQLSSESKNALQEAEVMQKSAADLRDEAEAARVA-LAEAEQKLQS 253
>AK070395:Os12g0271600 | Length = 647 Score = 29.3 bits (64), Expect = 8.2 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 2/51 (3%) Frame = +1 Query: 775 ELALALR-LSMEEERARQEA-IAKKAAEDNKDQASSSTDAIMAEAELTLNA 921 +L LAL+ LS E + A QEA + +K+A D +D+A ++ A +AEAE L + Sbjct: 390 DLMLALQQLSSESKNALQEAEVMQKSAADLRDEAEAARVA-LAEAEQKLQS 439 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,598,268 Number of extensions: 784900 Number of successful extensions: 3056 Number of sequences better than 10.0: 16 Number of HSP's gapped: 3018 Number of HSP's successfully gapped: 19 Length of query: 530 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 425 Effective length of database: 11,195,550 Effective search space: 4758108750 Effective search space used: 4758108750 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
