ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf17f16 |
|---|---|
| Clone Library Name | barley_pub |
>P55034:PSMD4_ARATH 26S proteasome non-ATPase regulatory subunit 4 - Arabidopsis| thaliana (Mouse-ear cress) Length = 386 Score = 338 bits (868), Expect = 3e-92 Identities = 175/270 (64%), Positives = 206/270 (76%), Gaps = 7/270 (2%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 MVLE+TMICIDNSEWMRNGDYSPSR QAQ +AVNL+CGAKTQSNPENTVG++TMAGKGVR Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VL TPTSDLGKILACMHGL+VG KHRQNK Q+QRIIVF GSP+KY Sbjct: 61 VLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKY 120 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDD-EKPEKLEALIAAVNSSDSSHIVHVPPGDHA 639 +KK LE +GK+LKKN+V+LD+V+FGE DD EKP+KLEAL+ AVN++D SHIVHVP G +A Sbjct: 121 EKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANA 180 Query: 640 LSDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEERA 819 LSDVL+STP+ +DFGVDPN+DPELALALR+SMEEERA Sbjct: 181 LSDVLLSTPV-FTGDEGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERA 239 Query: 820 RQEAIAKKAAED------NKDQASSSTDAI 891 RQEA AKKAA++ + D AS+S + + Sbjct: 240 RQEAAAKKAADEAGQKDKDGDTASASQETV 269 Score = 55.1 bits (131), Expect = 8e-07 Identities = 28/67 (41%), Positives = 48/67 (71%) Frame = +1 Query: 1099 QDAEASGQSDMSKVFEDRSFVTSILNSLPGVDPNDPSVKDLLASLHGQGEQE*KDEADKT 1278 + +EA+G + + +++F++S+L+SLPGVDPNDP+VK+LLASL + ++ ++E + Sbjct: 322 ESSEATGAGN--NLLGNQAFISSVLSSLPGVDPNDPAVKELLASLPDESKRT-EEEESSS 378 Query: 1279 DKPEDGK 1299 K ED K Sbjct: 379 KKGEDEK 385
>Q58DA0:PSMD4_BOVIN 26S proteasome non-ATPase regulatory subunit 4 - Bos taurus (Bovine)| Length = 382 Score = 231 bits (588), Expect = 8e-60 Identities = 145/405 (35%), Positives = 215/405 (53%), Gaps = 6/405 (1%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 MVLESTM+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG++T+A Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 59 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VL T T D G+IL+ +H ++ KHRQ K + RII F+GSPV+ Sbjct: 60 VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 119 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSD--SSHIVHVPPGDH 636 ++K L + K+LKK V +D+++FGE ++ EKL A + +N D SH+V VPPG Sbjct: 120 NEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP- 177 Query: 637 ALSDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEER 816 +L+D LIS+PI ++FGVDP+ DPELALALR+SMEE+R Sbjct: 178 SLADALISSPI---------LAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQR 228 Query: 817 ARQEAIAKKAAEDNKDQASSST----DAIMAEAELTLNAPXXXXXXXXXXXXXXXXXXXX 984 RQE A++AA + +A +T D+ A ++T++ Sbjct: 229 QRQEEEARRAAAASAAEAGIATAGTEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIA 288 Query: 985 XXMSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQDAEASGQSDMSKVFEDRSFVT 1164 M M + +E + + D V +D F+ Sbjct: 289 YAMQM------------SLQGAEFGQAESADMDASSAMDTSEPTKEEDDYDVMQDPEFLQ 336 Query: 1165 SILNSLPGVDPNDPSVKDLLASLHGQGEQE*KDEADKTDKPEDGK 1299 S+L +LPGVDPN+ ++++ + SL Q ++ K + + DK E+ K Sbjct: 337 SVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKKEEDK 381
>P55036:PSMD4_HUMAN 26S proteasome non-ATPase regulatory subunit 4 - Homo sapiens (Human)| Length = 377 Score = 227 bits (578), Expect = 1e-58 Identities = 143/400 (35%), Positives = 212/400 (53%), Gaps = 6/400 (1%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 MVLESTM+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG++T+A Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 59 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VL T T D G+IL+ +H ++ KHRQ K + RII F+GSPV+ Sbjct: 60 VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 119 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSD--SSHIVHVPPGDH 636 ++K L + K+LKK V +D+++FGE ++ EKL A + +N D SH+V VPPG Sbjct: 120 NEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP- 177 Query: 637 ALSDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEER 816 +L+D LIS+PI ++FGVDP+ DPELALALR+SMEE+R Sbjct: 178 SLADALISSPI---------LAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQR 228 Query: 817 ARQEAIAKKAAEDNKDQASSST----DAIMAEAELTLNAPXXXXXXXXXXXXXXXXXXXX 984 RQE A++AA + +A +T D+ A ++T++ Sbjct: 229 QRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIA 288 Query: 985 XXMSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQDAEASGQSDMSKVFEDRSFVT 1164 M M + +E + + D V +D F+ Sbjct: 289 YAMQM------------SLQGAEFGQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQ 336 Query: 1165 SILNSLPGVDPNDPSVKDLLASLHGQGEQE*KDEADKTDK 1284 S+L +LPGVDPN+ ++++ + SL Q ++ K + + DK Sbjct: 337 SVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDK 376
>O35226:PSMD4_MOUSE 26S proteasome non-ATPase regulatory subunit 4 - Mus musculus (Mouse)| Length = 376 Score = 225 bits (573), Expect = 5e-58 Identities = 141/400 (35%), Positives = 212/400 (53%), Gaps = 6/400 (1%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 MVLESTM+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG++T+A Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 59 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VL T T D G+IL+ +H ++ KHRQ K + RII F+GSPV+ Sbjct: 60 VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 119 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSD--SSHIVHVPPGDH 636 ++K L + K+LKK V +D+++FGE ++ EKL A + +N D SH+V VPPG Sbjct: 120 NEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP- 177 Query: 637 ALSDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEER 816 +L+D LIS+PI ++FGVDP+ DPELALALR+SMEE+R Sbjct: 178 SLADALISSPI---------LAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQR 228 Query: 817 ARQEAIAKKAAEDNKDQASSST----DAIMAEAELTLNAPXXXXXXXXXXXXXXXXXXXX 984 RQE A++AA + +A +T D+ A ++T+N Sbjct: 229 QRQEEEARRAAAASAAEAGIATPGTEDSDDALLKMTINQQEFGRPGLPDLSSMTEEEQIA 288 Query: 985 XXMSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQDAEASGQSDMSKVFEDRSFVT 1164 M M + ++ + D V +D F+ Sbjct: 289 YAMQM-------------SLQGTEFSQESADMDASSAMDTSDPVKEEDDYDVMQDPEFLQ 335 Query: 1165 SILNSLPGVDPNDPSVKDLLASLHGQGEQE*KDEADKTDK 1284 S+L +LPGVDPN+ +++ ++ +L Q ++ K++ + +K Sbjct: 336 SVLENLPGVDPNNAAIRSVMGALASQATKDGKNDKKEEEK 375
>O94444:RPN10_SCHPO 26S proteasome regulatory subunit rpn10 - Schizosaccharomyces pombe| (Fission yeast) Length = 243 Score = 213 bits (543), Expect = 1e-54 Identities = 116/255 (45%), Positives = 154/255 (60%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 MVLE+TMI IDNSEWM NGDY P+RF+AQ D V++I K NPEN G+MT+ + Sbjct: 1 MVLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQ 60 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VL T T D GK L+ MH L V KHR+NK Q+QRI+ F+GSP+ Sbjct: 61 VLSTLTRDYGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVE 120 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSDSSHIVHVPPGDHAL 642 D+K L + K++KKNNVA+D++ GE +E L+ I A NSSDS H+V +PP L Sbjct: 121 DEKNLIRLAKRMKKNNVAIDIIHIGELQNE--SALQHFIDAANSSDSCHLVSIPPSPQLL 178 Query: 643 SDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEERAR 822 SD++ +PI +++GVDPN+D ELALAL LSM EERAR Sbjct: 179 SDLVNQSPI--------------GQGVVASQNQFEYGVDPNLDVELALALELSMAEERAR 224 Query: 823 QEAIAKKAAEDNKDQ 867 QE A+K++E+ +D+ Sbjct: 225 QEVAAQKSSEETEDK 239
>P38886:RPN10_YEAST 26S proteasome regulatory subunit RPN10 - Saccharomyces cerevisiae| (Baker's yeast) Length = 268 Score = 194 bits (494), Expect = 7e-49 Identities = 110/264 (41%), Positives = 159/264 (60%), Gaps = 3/264 (1%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 MVLE+T++ IDNSE+ RNGD+ +RF+AQ D+V I AK SNPENTVG+++ AG R Sbjct: 1 MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPR 60 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VL T T++ GKILA +H ++ KHRQNK Q QRI+ F+ SP+ Sbjct: 61 VLSTFTAEFGKILAGLHDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISD 120 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNS--SDSSHIVHVPPGDH 636 + L + K LKKNNVA+D+++FGE ++ E L+ IAAVN+ ++SH++ V PG Sbjct: 121 SRDELIRLAKTLKKNNVAVDIINFGEI-EQNTELLDEFIAAVNNPQEETSHLLTVTPGPR 179 Query: 637 ALSDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXY-DFGVDPNVDPELALALRLSMEEE 813 L + + S+PI + DFGVDP++DPELA+ALRLSMEEE Sbjct: 180 LLYENIASSPIILEEGSSGMGAFGGSGGDSDANGTFMDFGVDPSMDPELAMALRLSMEEE 239 Query: 814 RARQEAIAKKAAEDNKDQASSSTD 885 + RQE + ++ + ++ + S + Sbjct: 240 QQRQERLRQQQQQQDQPEQSEQPE 263
>P55035:PSMD4_DROME 26S proteasome non-ATPase regulatory subunit 4 - Drosophila| melanogaster (Fruit fly) Length = 396 Score = 190 bits (482), Expect = 2e-47 Identities = 112/253 (44%), Positives = 148/253 (58%), Gaps = 2/253 (0%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 MVLESTMIC DNS++ RNGDY P+R Q D +NL+C K +SNPEN VG+MT++ V Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNT-VE 59 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VL T TSD G+I + MH ++ KHRQ K + RI+VF+GSP+ + Sbjct: 60 VLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINH 119 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSD--SSHIVHVPPGDH 636 ++ L K+LKK V +D+V FG+ + E L A I A+N D SH+V VP G Sbjct: 120 EEGDLVKQAKRLKKEKVNVDIVSFGDHGNNN-EILTAFINALNGKDGTGSHLVSVPRGS- 177 Query: 637 ALSDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEER 816 LSD L+S+PI ++FGVDPN DPELALALR+SMEE+R Sbjct: 178 VLSDALLSSPI--------IQGEDGMGGAGLGGNVFEFGVDPNEDPELALALRVSMEEQR 229 Query: 817 ARQEAIAKKAAED 855 RQE+ ++A D Sbjct: 230 QRQESEQRRANPD 242 Score = 42.0 bits (97), Expect = 0.007 Identities = 24/59 (40%), Positives = 35/59 (59%) Frame = +1 Query: 1126 DMSKVFEDRSFVTSILNSLPGVDPNDPSVKDLLASLHGQGEQE*KDEADKTDKPEDGKN 1302 D S+V D +F+ S+L +LPGVDP +V+D + SL+ KD+ DK DGK+ Sbjct: 345 DYSEVIGDPAFLQSVLENLPGVDPQSEAVRDAVGSLN-------KDK----DKKSDGKD 392
>O17453:PSMD4_SCHMA 26S proteasome non-ATPase regulatory subunit 4 - Schistosoma| mansoni (Blood fluke) Length = 420 Score = 161 bits (408), Expect = 6e-39 Identities = 94/244 (38%), Positives = 139/244 (56%), Gaps = 2/244 (0%) Frame = +1 Query: 103 MVLESTMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 282 M E+T+I +DNS++MRNGD+ P+R QAQ DAV LIC +K Q NPENT+G++++A Sbjct: 1 MSQEATIIAVDNSDYMRNGDFFPTRLQAQNDAVGLICQSKRQRNPENTIGLLSLA--NTE 58 Query: 283 VLVTPTSDLGKILACMHGLEVGXXXXXXXXXXXXXXXXKHRQNKRQQQRIIVFIGSPVKY 462 VL T T+D+ KI +H +E +HRQ + Q+ RI+ FIGSP+ Sbjct: 59 VLCTLTNDVSKIYNRLHLVEPKGRIIFCSSIRIAHLALRHRQLRHQKMRIVCFIGSPILE 118 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSSD--SSHIVHVPPGDH 636 D+K L + K+LKK V +D+++FGE + + +KL I +N D SH++ V PG Sbjct: 119 DEKELTRLAKRLKKEKVNVDIINFGENETNE-QKLSEFIDTLNGKDGTGSHLISVAPGT- 176 Query: 637 ALSDVLISTPIXXXXXXXXXXXXXXXXXXXXXXXXYDFGVDPNVDPELALALRLSMEEER 816 L D L+++P+ +FG+D DP+L ALR+SME++R Sbjct: 177 VLHDTLMTSPV---------VAGEDGSGMAGAGLGLEFGLDGAEDPDLLYALRVSMEDQR 227 Query: 817 ARQE 828 RQE Sbjct: 228 MRQE 231 Score = 32.0 bits (71), Expect = 7.5 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = +1 Query: 1138 VFEDRSFVTSILNSLPGVDPNDPSVKDLLASLHGQGEQ--E*KDEADKTDK 1284 V D F+ S+L SLPGVD + V+ + +L Q KDE + DK Sbjct: 367 VMYDAEFLESVLQSLPGVDTQNEDVRKAINALTKSQSQRGSKKDEKEDEDK 417
>Q8YBL2:GUAA_BRUME GMP synthase [glutamine-hydrolyzing] - Brucella melitensis| Length = 507 Score = 40.0 bits (92), Expect = 0.027 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 10/78 (12%) Frame = +3 Query: 120 DDLHRQLGVDAERRLLAVPLPGAGRRRQ---PHLRRQDPVEPGEYGGRHDDG----RQGR 278 D++ + DA + AV LP R R PHLR + + G++GGRHD G R Sbjct: 428 DEIRKAGLYDAIWQAFAVLLPVQDRGRDGGWPHLRIRLRLARGDFGGRHDGGFLPLRHEF 487 Query: 279 ARAC-HPHQR--PRQDPR 323 R C HPH + PR PR Sbjct: 488 PRQCGHPHHQRSPRHQPR 505
>P0ADK6:YIBA_ECOLI Protein yibA - Escherichia coli| Length = 280 Score = 35.0 bits (79), Expect = 0.89 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +1 Query: 406 QNKRQQQRIIVFIGSPVKYDKKVLETIGKKLKKNNVALDVVD-FGETDDE 552 Q+K ++ RI IG + DK+VL + +LKKN V D+++ GE D+ Sbjct: 202 QDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDK 251
>P0ADK7:YIBA_ECO57 Protein yibA - Escherichia coli O157:H7| Length = 280 Score = 35.0 bits (79), Expect = 0.89 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +1 Query: 406 QNKRQQQRIIVFIGSPVKYDKKVLETIGKKLKKNNVALDVVD-FGETDDE 552 Q+K ++ RI IG + DK+VL + +LKKN V D+++ GE D+ Sbjct: 202 QDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDK 251
>Q89AP8:ILVH_BUCBP Acetolactate synthase small subunit - Buchnera aphidicola subsp.| Baizongia pistaciae Length = 159 Score = 34.3 bits (77), Expect = 1.5 Identities = 18/45 (40%), Positives = 29/45 (64%) Frame = +1 Query: 463 DKKVLETIGKKLKKNNVALDVVDFGETDDEKPEKLEALIAAVNSS 597 DKKV+E IGK+L K +DV+ E +DE+ K E ++ +N++ Sbjct: 54 DKKVIEQIGKQLHK---LIDVLKVTEIEDEEHFKREIMLIKINNT 95
>Q3UIL6:PKHA7_MOUSE Pleckstrin homology domain-containing family A member 7 - Mus| musculus (Mouse) Length = 1118 Score = 33.1 bits (74), Expect = 3.4 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%) Frame = +3 Query: 72 RLQRDPQRRNHGARVDDDLHRQLGVDAERRLLAVPLPGA--GRRRQPHLRRQDPVEPGEY 245 R QRDP R D R + AE L V LPG G++ QP ++ V P Y Sbjct: 345 RAQRDPLE----GRRDRSKARSPYLPAEEDALFVDLPGGPRGQQAQPQRAEKNGVPP--Y 398 Query: 246 GGRHDDGRQGRARACHPHQRPRQDPRL---YARAGSWS*SKLG 365 G +G G R P P + + A+A W+ ++ G Sbjct: 399 GLGEQNGTNGYQRTAPPRANPEKHSQRKTGLAQAEHWTKAQKG 441
>Q16992:LWA_ANTEL LWamide neuropeptides precursor [Contains: LWamide I; Metamorphosin| A - Anthopleura elegantissima (Sea anemone) Length = 514 Score = 31.6 bits (70), Expect = 9.8 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 7/59 (11%) Frame = +3 Query: 189 GRRRQPHL--RRQDPVEPGEYGGRHDDGRQGRARACHPHQ----RPRQDPRLYAR-AGS 344 G+R+ P L R DP +PG +G R + G G R+ P Q RQ+P L+ R AGS Sbjct: 415 GKRQNPGLWGRSADPQQPGLWGKRQNPGLWG--RSADPQQPGLWGKRQNPGLWGRSAGS 471
>Q9A4D6:CARB_CAUCR Carbamoyl-phosphate synthase large chain - Caulobacter crescentus| (Caulobacter vibrioides) Length = 1099 Score = 31.6 bits (70), Expect = 9.8 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 2/28 (7%) Frame = -3 Query: 242 FSGFDWVLAPQMRLTASACA--WKRDGE 165 F+G D VL P+MR T WKRDGE Sbjct: 916 FAGVDTVLGPEMRSTGEVMGLDWKRDGE 943
>Q9VS46:RINT1_DROME RINT1-like protein - Drosophila melanogaster (Fruit fly)| Length = 724 Score = 31.6 bits (70), Expect = 9.8 Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 4/118 (3%) Frame = -1 Query: 1420 SYRQRSYKRIK*IHS----PSVKAANAGNLLPFFMCMKQQRDFSSSHLQACLSCPPHLST 1253 S+RQR + +HS PS+ NA N L + + + HL A L+ P Sbjct: 468 SFRQRLVQ----LHSSGAVPSIPILNAINYLVMVL-REWGENVHYLHLHAALAGPNATEI 522 Query: 1252 PALLGHAKMPVDLSQMGHWGQHQEAN*GWMSQMICLQTLCSYQIDQTPLRPEQTFEEP 1079 ++ HA ++++ HW + N + SY+ D P PEQ EP Sbjct: 523 NSVFEHA-----VAELEHWARQLMRNLATKATNEMKAKSMSYRRDAWPTMPEQNSREP 575 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 227,538,347 Number of extensions: 4481973 Number of successful extensions: 14607 Number of sequences better than 10.0: 16 Number of HSP's gapped: 14562 Number of HSP's successfully gapped: 22 Length of query: 530 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 412 Effective length of database: 68,319,629 Effective search space: 28147687148 Effective search space used: 28147687148 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
