ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf14c17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK111407:Os06g0273800 | 338 | 3e-93 | 2 | AK106215:Os06g0273800 | 338 | 3e-93 | 3 | AK102635:Os06g0273800 | 338 | 3e-93 | 4 | AK058911:Os06g0273800 | 338 | 3e-93 | 5 | AK071238:Os05g0297900 | 335 | 2e-92 | 6 | AK099911:Os02g0827900 | 239 | 2e-63 | 7 | AK069104:Os12g0285600 | 31 | 1.2 | 8 | Os06g0729500:Os06g0729500 | 29 | 3.4 | 9 | Os12g0621000:Os12g0621000 | 29 | 4.4 | 10 | Os04g0481600:Os04g0481600 | 28 | 5.8 | 11 | AK072311:Os04g0527800 | 28 | 7.6 |
|---|
>AK111407:Os06g0273800 | Length = 180 Score = 338 bits (867), Expect = 3e-93 Identities = 168/180 (93%), Positives = 177/180 (98%) Frame = +3 Query: 39 MGFIGDQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 218 MGFIGD +ESIRSMQ+RQVL+QIISLGMIVTSALIIWKGL+V TGSESPVVVVLSGSMEP Sbjct: 1 MGFIGDTIESIRSMQVRQVLAQIISLGMIVTSALIIWKGLIVVTGSESPVVVVLSGSMEP 60 Query: 219 GFKRGDILFLRMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 398 GFKRGDILFL MSK+PIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF Sbjct: 61 GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 120 Query: 399 GDDRLLYAHGQLWLQQHHIMGRAVGYLPHVGWVTIVMTEKPIIKYLLIGALGLLVITSKD 578 GDDRLLYAHGQLWLQQHHIMGRAVG+LP+VGWVTI+MTEKPIIKYLLIGALGLLVITSK+ Sbjct: 121 GDDRLLYAHGQLWLQQHHIMGRAVGFLPYVGWVTIIMTEKPIIKYLLIGALGLLVITSKE 180
>AK106215:Os06g0273800 | Length = 180 Score = 338 bits (867), Expect = 3e-93 Identities = 168/180 (93%), Positives = 177/180 (98%) Frame = +3 Query: 39 MGFIGDQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 218 MGFIGD +ESIRSMQ+RQVL+QIISLGMIVTSALIIWKGL+V TGSESPVVVVLSGSMEP Sbjct: 1 MGFIGDTIESIRSMQVRQVLAQIISLGMIVTSALIIWKGLIVVTGSESPVVVVLSGSMEP 60 Query: 219 GFKRGDILFLRMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 398 GFKRGDILFL MSK+PIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF Sbjct: 61 GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 120 Query: 399 GDDRLLYAHGQLWLQQHHIMGRAVGYLPHVGWVTIVMTEKPIIKYLLIGALGLLVITSKD 578 GDDRLLYAHGQLWLQQHHIMGRAVG+LP+VGWVTI+MTEKPIIKYLLIGALGLLVITSK+ Sbjct: 121 GDDRLLYAHGQLWLQQHHIMGRAVGFLPYVGWVTIIMTEKPIIKYLLIGALGLLVITSKE 180
>AK102635:Os06g0273800 | Length = 180 Score = 338 bits (867), Expect = 3e-93 Identities = 168/180 (93%), Positives = 177/180 (98%) Frame = +3 Query: 39 MGFIGDQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 218 MGFIGD +ESIRSMQ+RQVL+QIISLGMIVTSALIIWKGL+V TGSESPVVVVLSGSMEP Sbjct: 1 MGFIGDTIESIRSMQVRQVLAQIISLGMIVTSALIIWKGLIVVTGSESPVVVVLSGSMEP 60 Query: 219 GFKRGDILFLRMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 398 GFKRGDILFL MSK+PIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF Sbjct: 61 GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 120 Query: 399 GDDRLLYAHGQLWLQQHHIMGRAVGYLPHVGWVTIVMTEKPIIKYLLIGALGLLVITSKD 578 GDDRLLYAHGQLWLQQHHIMGRAVG+LP+VGWVTI+MTEKPIIKYLLIGALGLLVITSK+ Sbjct: 121 GDDRLLYAHGQLWLQQHHIMGRAVGFLPYVGWVTIIMTEKPIIKYLLIGALGLLVITSKE 180
>AK058911:Os06g0273800 | Length = 180 Score = 338 bits (867), Expect = 3e-93 Identities = 168/180 (93%), Positives = 177/180 (98%) Frame = +3 Query: 39 MGFIGDQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 218 MGFIGD +ESIRSMQ+RQVL+QIISLGMIVTSALIIWKGL+V TGSESPVVVVLSGSMEP Sbjct: 1 MGFIGDTIESIRSMQVRQVLAQIISLGMIVTSALIIWKGLIVVTGSESPVVVVLSGSMEP 60 Query: 219 GFKRGDILFLRMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 398 GFKRGDILFL MSK+PIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF Sbjct: 61 GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 120 Query: 399 GDDRLLYAHGQLWLQQHHIMGRAVGYLPHVGWVTIVMTEKPIIKYLLIGALGLLVITSKD 578 GDDRLLYAHGQLWLQQHHIMGRAVG+LP+VGWVTI+MTEKPIIKYLLIGALGLLVITSK+ Sbjct: 121 GDDRLLYAHGQLWLQQHHIMGRAVGFLPYVGWVTIIMTEKPIIKYLLIGALGLLVITSKE 180
>AK071238:Os05g0297900 | Length = 180 Score = 335 bits (860), Expect = 2e-92 Identities = 166/180 (92%), Positives = 176/180 (97%) Frame = +3 Query: 39 MGFIGDQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 218 MGFIGD VESIRS+Q+RQVL+QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP Sbjct: 1 MGFIGDTVESIRSIQIRQVLAQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 60 Query: 219 GFKRGDILFLRMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 398 GFKRGDILFL MSK+PIRTGEIVVFN+DGREIPIVHRVIKVHER+ESAEVDILTKGDNNF Sbjct: 61 GFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHEREESAEVDILTKGDNNF 120 Query: 399 GDDRLLYAHGQLWLQQHHIMGRAVGYLPHVGWVTIVMTEKPIIKYLLIGALGLLVITSKD 578 GDDRLLYAHGQLWL QHHIMGRAVG+LP+VGWVTI+MTEKP IKYLLIGALGLLVITSK+ Sbjct: 121 GDDRLLYAHGQLWLHQHHIMGRAVGFLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKE 180
>AK099911:Os02g0827900 | Length = 191 Score = 239 bits (610), Expect = 2e-63 Identities = 114/151 (75%), Positives = 136/151 (90%) Frame = +3 Query: 78 MQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFLRMS 257 MQ+R L +I+LGM+++SAL+IWKGL++ TGSESP+VVVLS SME GF+RGDILFL+MS Sbjct: 1 MQIRHALVHLITLGMVISSALMIWKGLIIMTGSESPLVVVLSESMELGFERGDILFLQMS 60 Query: 258 KEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDRLLYAHGQLW 437 K PIRTG+IVVFN DGREIPIVHRVI+VHER+++A+VD LTKGDNN DDR+LY HGQLW Sbjct: 61 KHPIRTGDIVVFN-DGREIPIVHRVIEVHERRDNAQVDFLTKGDNNPMDDRILYTHGQLW 119 Query: 438 LQQHHIMGRAVGYLPHVGWVTIVMTEKPIIK 530 LQQHHIMGRA+GYLP GWVT+VMTEKP+IK Sbjct: 120 LQQHHIMGRAIGYLPKAGWVTLVMTEKPVIK 150
>AK069104:Os12g0285600 | Length = 756 Score = 30.8 bits (68), Expect = 1.2 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = -2 Query: 494 PPNVRKIAYSPPHDVMLLKPQLSVRVQQSVIPEIVVTFCEDVNFSTFLAFMN 339 P ++ +SP DV+L +L VR+ Q + E VV CE + + L N Sbjct: 183 PRSLTSNDFSPMSDVLLSTEKLRVRLLQEGLNETVVKECESIMMTELLELHN 234
>Os06g0729500:Os06g0729500 | Length = 1573 Score = 29.3 bits (64), Expect = 3.4 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = +3 Query: 312 IPIVHRVIKVHERQESAEVDILTKGDNNFGDDRLLY 419 +PI+ +++ R+ + D+ TKGD FG+ L++ Sbjct: 1351 LPILTKLLPQQLRETISSSDLYTKGDQQFGNGELIF 1386
>Os12g0621000:Os12g0621000 | Length = 893 Score = 28.9 bits (63), Expect = 4.4 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = +3 Query: 240 LFLRMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDRLLY 419 L L + +RT I VFN DG P + V +D L+ + GD+RLL Sbjct: 453 LSLPLPSTTMRTMTITVFNTDGTTGPSPYTVSVPKSGDTKTLIDALSIACSLKGDERLLV 512 Query: 420 A 422 A Sbjct: 513 A 513
>Os04g0481600:Os04g0481600 | Length = 501 Score = 28.5 bits (62), Expect = 5.8 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +3 Query: 615 LVVAQK*VRAENLASCVEWKLSCICFDFRVYAWSAR 722 LV AQK RA++ EW++ FD V WS R Sbjct: 461 LVTAQKKRRADDDGGDEEWRVCSASFDGEVRLWSLR 496
>AK072311:Os04g0527800 | Length = 338 Score = 28.1 bits (61), Expect = 7.6 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 9/78 (11%) Frame = +3 Query: 177 ESPVVVVLSGSMEPGFKR--------GDILFL-RMSKEPIRTGEIVVFNVDGREIPIVHR 329 + PVV+ L+G E GFKR G IL+L + + R G +VV + G Sbjct: 247 KGPVVMDLAGFTEQGFKRKLAVQTLFGKILYLSELPEFCSRDGSLVVKEIFGVTDEDADS 306 Query: 330 VIKVHERQESAEVDILTK 383 I++H E+++++ L K Sbjct: 307 -IRIHILSETSDIESLEK 323 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,241,387 Number of extensions: 521209 Number of successful extensions: 1461 Number of sequences better than 10.0: 11 Number of HSP's gapped: 1460 Number of HSP's successfully gapped: 11 Length of query: 272 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 173 Effective length of database: 11,435,796 Effective search space: 1978392708 Effective search space used: 1978392708 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
