ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf19i01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121056:Os07g0565000 | 287 | 6e-78 | 2 | AK120520:Os04g0502300 | 282 | 2e-76 | 3 | Os07g0565100:Os07g0565100 | 279 | 1e-75 | 4 | Os04g0613600:Os04g0613600 | 273 | 7e-74 | 5 | D29727:Os04g0613500 | 154 | 8e-38 | 6 | AK058705:Os08g0207000 | 89 | 4e-18 | 7 | AK110117: | 35 | 0.074 | 8 | AK099298:Os04g0691600 | 32 | 0.48 | 9 | AK059422:Os04g0691600 | 32 | 0.48 | 10 | AF095707:Os04g0691600 | 32 | 0.48 | 11 | AK119271:Os08g0499700 | 30 | 2.4 | 12 | AK109726:Os08g0499700 | 30 | 2.4 | 13 | AK064062:Os11g0661900 | 28 | 6.9 | 14 | Os12g0524600:Os12g0524600 | 28 | 9.1 | 15 | AK073866:Os01g0819000 | 28 | 9.1 |
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>AK121056:Os07g0565000 | Length = 161 Score = 287 bits (734), Expect = 6e-78 Identities = 134/145 (92%), Positives = 142/145 (97%) Frame = +1 Query: 106 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 285 MAEQTEK+FLKQPKVFLS+KK+ K K+PGK GNRFWKS+GLGFKTPREAIEGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 286 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 465 FTGTV+IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKE Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120 Query: 466 GDHVIIGQCRPLSKTVRFNVLKVVP 540 GDHVIIGQCRPLSKTVRFNVLKV+P Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIP 145
>AK120520:Os04g0502300 | Length = 160 Score = 282 bits (721), Expect = 2e-76 Identities = 132/145 (91%), Positives = 139/145 (95%) Frame = +1 Query: 106 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 285 MAEQTE++FLKQPKVFL KK K K+PGK GNRFWK++GLGFKTPREAIEGTYIDKKCP Sbjct: 1 MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60 Query: 286 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 465 FTGTV+IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120 Query: 466 GDHVIIGQCRPLSKTVRFNVLKVVP 540 GDHVIIGQCRPLSKTVRFNVLKV+P Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIP 145
>Os07g0565100:Os07g0565100 | Length = 170 Score = 279 bits (714), Expect = 1e-75 Identities = 134/154 (87%), Positives = 142/154 (92%), Gaps = 9/154 (5%) Frame = +1 Query: 106 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 285 MAEQTEK+FLKQPKVFLS+KK+ K K+PGK GNRFWKS+GLGFKTPREAIEGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 286 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQ---------RYEKRHSNIPAH 438 FTGTV+IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQ RYEKRHSNIPAH Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120 Query: 439 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVVP 540 +SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV+P Sbjct: 121 VSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 154
>Os04g0613600:Os04g0613600 | Length = 185 Score = 273 bits (699), Expect = 7e-74 Identities = 134/169 (79%), Positives = 142/169 (84%), Gaps = 24/169 (14%) Frame = +1 Query: 106 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 285 MAEQTEK+FLKQPKVFLS+KK+ K K+PGK GNRFWKS+GLGFKTPREAIEGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 286 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQ--------------------- 402 FTGTV+IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQ Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120 Query: 403 ---RYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVVP 540 RYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV+P Sbjct: 121 LGCRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP 169
>D29727:Os04g0613500 | Length = 80 Score = 154 bits (388), Expect = 8e-38 Identities = 71/80 (88%), Positives = 77/80 (96%) Frame = +1 Query: 106 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 285 MAEQTEK+FLKQPKVFLS+KK+ K K+PGK GNRFWKS+GLGFKTPREAIEGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 286 FTGTVAIRGRIIAGTCHSAK 345 FTGTV+IRGRIIAGTCHSAK Sbjct: 61 FTGTVSIRGRIIAGTCHSAK 80
>AK058705:Os08g0207000 | Length = 55 Score = 88.6 bits (218), Expect = 4e-18 Identities = 39/41 (95%), Positives = 41/41 (100%) Frame = +1 Query: 418 HSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVVP 540 HSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV+KV+P Sbjct: 1 HSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVIKVIP 41
>AK110117: | Length = 1028 Score = 34.7 bits (78), Expect = 0.074 Identities = 31/94 (32%), Positives = 43/94 (45%) Frame = +2 Query: 227 LVSRPQGKRSKVPTLTRSAHSLELLPSGAES*LEPATAPR*TGRSSCAGTTFTL*RSIRG 406 +++R +GKRS + +T S S L + LEP T RS F+ S Sbjct: 120 MLARNEGKRSSIVRITSSDPSSSLSDHPMQVDLEPPTR-----RSFWPAPAFSTPPS--D 172 Query: 407 MRRGTPTSQLTSPPASVSRKATMSSLASAGPCRK 508 +PTS T PPAS R+ LA+A P R+ Sbjct: 173 SAASSPTSS-TPPPASARRRKESGRLAAAEPGRR 205
>AK099298:Os04g0691600 | Length = 145 Score = 32.0 bits (71), Expect = 0.48 Identities = 23/74 (31%), Positives = 36/74 (48%) Frame = +1 Query: 319 IAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 498 + G + K ++T+ V L KY+R E+ AH P + K GD V + + RP Sbjct: 40 LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPDNQFKVGDVVELRRSRP 98 Query: 499 LSKTVRFNVLKVVP 540 +SKT F + + P Sbjct: 99 ISKTKHFLAVPLPP 112
>AK059422:Os04g0691600 | Length = 145 Score = 32.0 bits (71), Expect = 0.48 Identities = 23/74 (31%), Positives = 36/74 (48%) Frame = +1 Query: 319 IAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 498 + G + K ++T+ V L KY+R E+ AH P + K GD V + + RP Sbjct: 40 LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPDNQFKVGDVVELRRSRP 98 Query: 499 LSKTVRFNVLKVVP 540 +SKT F + + P Sbjct: 99 ISKTKHFLAVPLPP 112
>AF095707:Os04g0691600 | Length = 145 Score = 32.0 bits (71), Expect = 0.48 Identities = 23/74 (31%), Positives = 36/74 (48%) Frame = +1 Query: 319 IAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 498 + G + K ++T+ V L KY+R E+ AH P + K GD V + + RP Sbjct: 40 LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPDNQFKVGDVVELRRSRP 98 Query: 499 LSKTVRFNVLKVVP 540 +SKT F + + P Sbjct: 99 ISKTKHFLAVPLPP 112
>AK119271:Os08g0499700 | Length = 139 Score = 29.6 bits (65), Expect = 2.4 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = +2 Query: 329 PATAPR*TGRSSCAGTTFTL*RSIRGMRRGTPTSQLTSPPASVSRKA--TMSSLAS 490 P T+P TGR R +RG R TP S SPPA+ S +A TM LAS Sbjct: 29 PPTSPTSTGR-----------RRVRG--RSTPGSTRWSPPATTSPRARSTMRPLAS 71
>AK109726:Os08g0499700 | Length = 139 Score = 29.6 bits (65), Expect = 2.4 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = +2 Query: 329 PATAPR*TGRSSCAGTTFTL*RSIRGMRRGTPTSQLTSPPASVSRKA--TMSSLAS 490 P T+P TGR R +RG R TP S SPPA+ S +A TM LAS Sbjct: 29 PPTSPTSTGR-----------RRVRG--RSTPGSTRWSPPATTSPRARSTMRPLAS 71
>AK064062:Os11g0661900 | Length = 163 Score = 28.1 bits (61), Expect = 6.9 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +2 Query: 176 RQRGPARLATASGRVLALVSRPQGKRSKVPTLTRSAHSLELLP 304 R+R PA GR + L+ RP R + P + H + LLP Sbjct: 13 RRRQPA--VVVGGRQIRLLPRPSSLRRRQPAVVVGGHQICLLP 53
>Os12g0524600:Os12g0524600 | Length = 1425 Score = 27.7 bits (60), Expect = 9.1 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 Query: 419 TPTSQLTSPPASVSRKATMSSLASAGPCR 505 +P+S TSPPA+ R+A S+ A+ P R Sbjct: 680 SPSSSSTSPPAAPFRRARASAGAAISPLR 708
>AK073866:Os01g0819000 | Length = 579 Score = 27.7 bits (60), Expect = 9.1 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 11/119 (9%) Frame = +2 Query: 188 PARLATASGRVLALVSRPQGKRSKVPTLTRSAHSLELLPSGAES*LEPATAPR------- 346 P ++ +S + SRP + T++R++ S +PS + S +T R Sbjct: 205 PRIMSNSSSSTSSAASRPSSSSGRTSTISRTSSSTSTVPSVSRSSSRSSTPTRQPITRSS 264 Query: 347 --*TGRSSCAGTTFTL*RSIRGMRRGTPTSQLTSPPASV--SRKATMSSLASAGPCRKL 511 G S G F +I + R ++ +S P+S SR ++ +S A A P R L Sbjct: 265 APLAGHSPSVGRIFGS-NNITSIGRPVTSNGRSSAPSSAPSSRPSSPNSRARA-PVRPL 321 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,858,188 Number of extensions: 406248 Number of successful extensions: 1214 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1212 Number of HSP's successfully gapped: 15 Length of query: 256 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 158 Effective length of database: 11,475,837 Effective search space: 1813182246 Effective search space used: 1813182246 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
