ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf19f19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os05g0564000:Os05g0564000 43 8e-04
2AK070730:Os04g0429200 39 0.015
3AK109147:Os07g0572600 30 5.3
4AK072023:Os07g0572600 30 5.3
5AK106731:Os01g0619800 30 6.9
6AK067579:Os11g0118400 29 9.0

>Os05g0564000:Os05g0564000 |
          Length = 426
 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 24/37 (64%), Positives = 25/37 (67%)
 Frame = +2

Query: 722 RRKGADFAFLLEQARAQPPEERDLDAASWLASMDSPF 832
           R KGADF FLLEQARAQP E      A  L+S DSPF
Sbjct: 81  RSKGADFGFLLEQARAQPRE------AQRLSSQDSPF 111



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>AK070730:Os04g0429200 |
          Length = 381

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 28/67 (41%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = -2

Query: 1033 FLHCYVSYMRFMADTMIV--LVYKQR*FNQSQSKCWK*IMIATFDGKTTDMILSCRK*SS 860
            F  CYV     +AD  +    VY QR  NQ + K WK  +   FDG T   ILSCR  SS
Sbjct: 105  FSRCYVPNRSSLADITMFPSKVYSQREGNQPECKRWKQNLFGPFDG-TIGSILSCRNCSS 163

Query: 859  WTFLSTE 839
               L  E
Sbjct: 164  VLSLDFE 170



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>AK109147:Os07g0572600 |
          Length = 557

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 604 VWQLR*QRCNMIVFVHRTSSPTTASSSGQTAM 509
           ++ LR QR  ++   +RT++PT  SSSG  A+
Sbjct: 110 LYLLRSQRSGLLALFNRTAAPTNGSSSGSNAV 141



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>AK072023:Os07g0572600 |
          Length = 557

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 604 VWQLR*QRCNMIVFVHRTSSPTTASSSGQTAM 509
           ++ LR QR  ++   +RT++PT  SSSG  A+
Sbjct: 110 LYLLRSQRSGLLALFNRTAAPTNGSSSGSNAV 141



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>AK106731:Os01g0619800 |
          Length = 260

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = +1

Query: 1498 AWGQLKLLNLL----SHSHGHTNVVYAGINF 1578
            +W Q  L  LL    S SHGH+++++ GINF
Sbjct: 138  SWIQYSLKTLLAAKGSASHGHSHMIFLGINF 168



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>AK067579:Os11g0118400 |
          Length = 141

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/52 (40%), Positives = 25/52 (48%)
 Frame = +1

Query: 70  ATAVANADRPSSRRGPASAPNVPH*CASRRCMFTAATVDRASSGPSRLSRGS 225
           A A A +  P+S R PASAP  P   A+R C   A      +S P R  R S
Sbjct: 75  APAPAPSAAPASARSPASAPGSPA-AATRSCRAAAT----RTSSPPRCRRSS 121


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 48,541,074
Number of extensions: 1080321
Number of successful extensions: 2897
Number of sequences better than 10.0: 6
Number of HSP's gapped: 2895
Number of HSP's successfully gapped: 6
Length of query: 571
Length of database: 15,399,855
Length adjustment: 106
Effective length of query: 465
Effective length of database: 11,155,509
Effective search space: 5187311685
Effective search space used: 5187311685
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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