| Clone Name | FLbaf19f19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os05g0564000:Os05g0564000 | 43 | 8e-04 | 2 | AK070730:Os04g0429200 | 39 | 0.015 | 3 | AK109147:Os07g0572600 | 30 | 5.3 | 4 | AK072023:Os07g0572600 | 30 | 5.3 | 5 | AK106731:Os01g0619800 | 30 | 6.9 | 6 | AK067579:Os11g0118400 | 29 | 9.0 |
|---|
>Os05g0564000:Os05g0564000 | Length = 426 Score = 42.7 bits (99), Expect = 8e-04 Identities = 24/37 (64%), Positives = 25/37 (67%) Frame = +2 Query: 722 RRKGADFAFLLEQARAQPPEERDLDAASWLASMDSPF 832 R KGADF FLLEQARAQP E A L+S DSPF Sbjct: 81 RSKGADFGFLLEQARAQPRE------AQRLSSQDSPF 111
>AK070730:Os04g0429200 | Length = 381 Score = 38.5 bits (88), Expect = 0.015 Identities = 28/67 (41%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = -2 Query: 1033 FLHCYVSYMRFMADTMIV--LVYKQR*FNQSQSKCWK*IMIATFDGKTTDMILSCRK*SS 860 F CYV +AD + VY QR NQ + K WK + FDG T ILSCR SS Sbjct: 105 FSRCYVPNRSSLADITMFPSKVYSQREGNQPECKRWKQNLFGPFDG-TIGSILSCRNCSS 163 Query: 859 WTFLSTE 839 L E Sbjct: 164 VLSLDFE 170
>AK109147:Os07g0572600 | Length = 557 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -2 Query: 604 VWQLR*QRCNMIVFVHRTSSPTTASSSGQTAM 509 ++ LR QR ++ +RT++PT SSSG A+ Sbjct: 110 LYLLRSQRSGLLALFNRTAAPTNGSSSGSNAV 141
>AK072023:Os07g0572600 | Length = 557 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -2 Query: 604 VWQLR*QRCNMIVFVHRTSSPTTASSSGQTAM 509 ++ LR QR ++ +RT++PT SSSG A+ Sbjct: 110 LYLLRSQRSGLLALFNRTAAPTNGSSSGSNAV 141
>AK106731:Os01g0619800 | Length = 260 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%) Frame = +1 Query: 1498 AWGQLKLLNLL----SHSHGHTNVVYAGINF 1578 +W Q L LL S SHGH+++++ GINF Sbjct: 138 SWIQYSLKTLLAAKGSASHGHSHMIFLGINF 168
>AK067579:Os11g0118400 | Length = 141 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/52 (40%), Positives = 25/52 (48%) Frame = +1 Query: 70 ATAVANADRPSSRRGPASAPNVPH*CASRRCMFTAATVDRASSGPSRLSRGS 225 A A A + P+S R PASAP P A+R C A +S P R R S Sbjct: 75 APAPAPSAAPASARSPASAPGSPA-AATRSCRAAAT----RTSSPPRCRRSS 121 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 48,541,074 Number of extensions: 1080321 Number of successful extensions: 2897 Number of sequences better than 10.0: 6 Number of HSP's gapped: 2895 Number of HSP's successfully gapped: 6 Length of query: 571 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 465 Effective length of database: 11,155,509 Effective search space: 5187311685 Effective search space used: 5187311685 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)