ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf19f19 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g48940:12005.t04328:unspliced-genomic expressed protein| Length = 4538 Score = 42.3 bits (86), Expect = 0.010 Identities = 18/26 (69%), Positives = 20/26 (76%) Frame = +2 / +3 Query: 722 RRKGADFAFLLEQARAQPPEERDLDA 799 R KGADF FLLEQARAQP E + L + Sbjct: 252 RSKGADFGFLLEQARAQPREAQRLSS 329
>LOC_Os09g36470:12009.t03123:unspliced-genomic minus agglutinin, putative, expressed| Length = 3738 Score = 35.4 bits (71), Expect(3) = 0.032 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +2 / +3 Query: 119 HQHQMYLTDVRRGGACSLPPPSTVPQVALR 208 H HQ+ L R GG C PPP+T A R Sbjct: 2508 HPHQLLLLLHRAGGPCHRPPPATASATAAR 2597 Score = 25.4 bits (49), Expect(3) = 0.032 Identities = 7/20 (35%), Positives = 12/20 (60%) Frame = +3 / +1 Query: 45 ATATYAVHGYSSCECRSTVF 104 ++ +Y YSSC C + V+ Sbjct: 1339 SSCSYTARAYSSCRCATQVY 1398 Score = 24.0 bits (46), Expect(3) = 0.032 Identities = 9/26 (34%), Positives = 12/26 (46%) Frame = +3 / +3 Query: 186 PCLKWPFEAFTGQPCHPAAAPLSSTT 263 PCL+W A TG P + + T Sbjct: 3117 PCLRWQVVAATGWSWRPGSVARTGWT 3194 Score = 32.7 bits (65), Expect = 8.0 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -3 / -3 Query: 213 KPRRAT*GTVDGGGSEHAPPRRTSVRYIWC 124 + R A V GGG H PP R S R WC Sbjct: 2602 RARAAVAEAVAGGGR*HGPPARCSNRRSWC 2513
>LOC_Os01g63990:12001.t05767:unspliced-genomic catalytic/ hydrolase, putative, expressed| Length = 3003 Score = 30.4 bits (60), Expect(2) = 0.38 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +1 / -2 Query: 1360 WYD*NCTKTICRDVEFVK 1413 WYD +CT CR VE V+ Sbjct: 1028 WYDNDCTVVFCRGVELVE 975 Score = 24.0 bits (46), Expect(2) = 0.38 Identities = 7/31 (22%), Positives = 17/31 (54%) Frame = +3 / -2 Query: 1452 FPCLSIFIAPTIVRFCLGPIKVAKFIVPFSR 1544 +PC ++P + + G +++ + +VP R Sbjct: 914 YPCQLYLMSPRLHLYTRGLVRLLRMVVPAGR 822
>LOC_Os03g50510:12003.t04391:unspliced-genomic threonine dehydratase biosynthetic, chloroplast precursor, putative,| expressed Length = 5651 Score = 31.3 bits (62), Expect(2) = 0.49 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 / +2 Query: 1640 LYHLLLVSSYDW*FHCPFMTKKKK 1711 L++LLL+ Y+W F C F+ KK Sbjct: 1568 LFYLLLLYQYNWQFSCLFIQNNKK 1639 Score = 22.6 bits (43), Expect(2) = 0.49 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +1 / +2 Query: 1495 FAWGQLKLLNLLSHSHG 1545 F W +K+LNLL G Sbjct: 1394 FCWSLIKVLNLLCFMDG 1444
>LOC_Os05g01320:12005.t00035:unspliced-genomic expressed protein| Length = 3798 Score = 36.3 bits (73), Expect = 0.63 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = +1 / +1 Query: 559 ARKLSCCTAASEAATLTCQDVLGLHHLVQNLLIQHSWLNWACRVYIIY 702 A KLS C+ A + L LG H N+L +HS ++ CR + IY Sbjct: 1489 ANKLSSCSFAFKHTQLHMFAPLGYTHSFSNVLERHSCKSFFCRTWYIY 1632
>LOC_Os02g38000:12002.t03438:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5180 Score = 33.6 bits (67), Expect(2) = 1.2 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -1 / -1 Query: 659 WISRFWTRWWRPRTS 615 W SR+W RWWR R S Sbjct: 3122 WRSRWWCRWWRTRRS 3078 Score = 25.4 bits (49), Expect(2) = 1.2 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -1 / -2 Query: 266 TCGGGQRRCRGMTWLPR 216 TCG G+ RC W PR Sbjct: 940 TCGRGRCRCVPKRWHPR 890
>LOC_Os03g10310:12003.t00833:unspliced-genomic expressed protein| Length = 2376 Score = 29.5 bits (58), Expect(2) = 1.3 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 208 RLSRGSHVIPRQRLCPPPH 264 +L R H +PR+R PPPH Sbjct: 1525 QLPRSPHRVPRRRRPPPPH 1581 Score = 23.1 bits (44), Expect(2) = 1.3 Identities = 9/17 (52%), Positives = 9/17 (52%) Frame = +2 / +2 Query: 143 DVRRGGACSLPPPSTVP 193 DVR GG PPP P Sbjct: 1436 DVRAGGTPPTPPPLLPP 1486
>LOC_Os03g47702:12003.t005803:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12437 Score = 33.6 bits (67), Expect(2) = 2.0 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -1 / -2 Query: 659 WISRFWTRWWRPRTS 615 W SR+W RWWR R S Sbjct: 7861 WRSRWWCRWWRTRRS 7817 Score = 25.8 bits (50), Expect(2) = 2.0 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -1 / -3 Query: 266 TCGGGQRRCRGMTWLPR 216 TCG G+ RC W PR Sbjct: 5679 TCGRGRCRCVPKQWRPR 5629
>LOC_Os09g36240:12009.t03100:unspliced-genomic deoxyribodipyrimidine photolyase family protein, expressed| Length = 5937 Score = 27.6 bits (54), Expect(2) = 2.1 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = -3 / +3 Query: 1170 KFCLCSDVDG*ECHCYILLKLFLY*NQLH*CYQVILYS 1057 K LC D C+ ++ + LH CYQ+ +Y+ Sbjct: 3201 KVLLCMDCISVLALCFYIINTVFVVSLLHECYQISIYT 3314 Score = 24.0 bits (46), Expect(2) = 2.1 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = -1 / +1 Query: 1034 FSSLLCFIYEIYG*HYDCFSLQAK 963 FSS+ C +Y +Y C S AK Sbjct: 3376 FSSM*CIMYSMYLFSASCISCAAK 3447
>LOC_Os09g19260:12009.t01661:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2515 Score = 34.5 bits (69), Expect = 2.2 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / -1 Query: 161 ACSLPPPSTVPQVALRGFHGAAMSSRGSASVLHHMSMKLSLCP 289 A +LPP S VA+ G + S G VLH S+ L+ P Sbjct: 1567 ATTLPPTSPAESVAVAATDGLGLRSAGEVGVLHEDSLSLNAEP 1439
>LOC_Os03g55640:12003.t04825:unspliced-genomic peptidase/ serine-type peptidase, putative, expressed| Length = 3009 Score = 27.6 bits (54), Expect(2) = 2.2 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 / +1 Query: 161 ACSLPPPSTVPQVALRGFHGAAMSSRGSA 247 AC+ PPP P V RG A+ +R A Sbjct: 403 ACAAPPPPPPPPVRRRGLGLASSRTRSPA 489 Score = 24.0 bits (46), Expect(2) = 2.2 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = +1 / +1 Query: 235 PRQRLCPPP 261 PRQRL PPP Sbjct: 574 PRQRLSPPP 600
>LOC_Os08g40919:12008.t04356:unspliced-genomic expressed protein| Length = 2887 Score = 28.6 bits (56), Expect(2) = 2.4 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +1 / -2 Query: 181 VDRASSGPSRLSRGSHVIPRQRLCPPPHV 267 V R + L G+H PR R PPP V Sbjct: 999 VRRGGAAAGALLHGAHQAPRPRRGPPPRV 913 Score = 28.6 bits (56), Expect(2) = 2.4 Identities = 12/44 (27%), Positives = 19/44 (43%) Frame = +1 / -1 Query: 499 CMHAWQFGPN*TRWWEN*SDARKLSCCTAASEAATLTCQDVLGL 630 C + G RWW + +R+ + AAS T + D + L Sbjct: 634 CWEGCRSGTATGRWWRRPAASRRCAANAAASSGVTRSSSDTMSL 503
>LOC_Os09g27540:12009.t02432:unspliced-genomic C2 domain containing protein| Length = 5188 Score = 29.0 bits (57), Expect(2) = 2.9 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = -1 / +1 Query: 89 AFATAVAMNRICSCCC 42 A A A A R CSCCC Sbjct: 2491 AAAAAAARRRACSCCC 2538 Score = 22.1 bits (42), Expect(2) = 2.9 Identities = 6/12 (50%), Positives = 8/12 (66%) Frame = -1 / +3 Query: 56 CSCCCTNRENKR 21 CSCCC+ +R Sbjct: 2652 CSCCCSCCRRRR 2687
>LOC_Os07g35650:12007.t03240:unspliced-genomic protein kinase, putative| Length = 3572 Score = 28.1 bits (55), Expect(2) = 3.0 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +1 / -2 Query: 70 ATAVANADRPSSRRGPASAPNVPH*CASRRCMFTAATVDRASSG 201 A A + + R G + P PH +SRRC AA AS G Sbjct: 832 AAAGGRRRKGTPRTGGCTTPRTPHLPSSRRCRAWAAARWSAS*G 701 Score = 23.1 bits (44), Expect(2) = 3.0 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +1 / -2 Query: 190 ASSGPSRLSRGSHVIPRQRLCPPP 261 A + P+R S G R+R PPP Sbjct: 670 ACTAPARTSWGGRCRRRRRRPPPP 599
>LOC_Os10g04429:12010.t00327:unspliced-genomic alcohol acyl transferase, putative, expressed| Length = 4509 Score = 34.1 bits (68), Expect = 3.1 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 / +1 Query: 713 RWRRRKGADFAFLLEQARAQPPEERDLDAASW 808 RWRRR A + + PPEE +++A SW Sbjct: 271 RWRRRW*ASTRWPAASGSSPPPEEEEVEAVSW 366
>LOC_Os06g41600:12006.t03852:unspliced-genomic hypothetical protein| Length = 279 Score = 34.1 bits (68), Expect = 3.1 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -1 / +1 Query: 1172 ENFVFVLMWTVESATVIYYLSYFFI 1098 EN VF ++W VES V+ L +FF+ Sbjct: 184 ENVVFYVLWVVESVVVLANLCFFFL 258
>LOC_Os03g30700:12003.t02675:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2646 Score = 34.1 bits (68), Expect = 3.1 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -2 / +3 Query: 271 HRHVVEDRGAAAG*HGCPVKASKGHLRHGRRWRQ*TCTS 155 HRH DRGAA H P+ S H R R+ + T S Sbjct: 1455 HRHPPRDRGAARPSHRRPIDLSSNHRRRPRKHQHATTPS 1571
>LOC_Os03g14050:12003.t01197:unspliced-genomic thaumatin-like protein 1 precursor, putative, expressed| Length = 3224 Score = 34.1 bits (68), Expect = 3.1 Identities = 18/55 (32%), Positives = 23/55 (41%) Frame = -3 / +3 Query: 300 HRRAGQRLNFIDMWWRTEALPRDDMAAP*KPRRAT*GTVDGGGSEHAPPRRTSVR 136 HR AG+ WR + P +P+R G +G G EH RR S R Sbjct: 930 HRAAGRGRRSAGRKWRRQRRQVHGHGLPRRPKRRVPGRPEGHGGEHRHRRRRSRR 1094
>LOC_Os02g28110:12002.t02505:unspliced-genomic ornithine decarboxylase, putative, expressed| Length = 1615 Score = 34.1 bits (68), Expect = 3.1 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = +1 / -3 Query: 145 CASRRCMFTAATVDRASSGPSRLS 216 CASRRC A T R SS P+RLS Sbjct: 1058 CASRRCGRRARTPSRRSSAPARLS 987
>LOC_Os01g16030:12001.t01453:unspliced-genomic ADP-ribosylation factor, putative, expressed| Length = 4212 Score = 34.1 bits (68), Expect = 3.1 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -1 / +3 Query: 98 GRSAFATAVAMNRICSCCC 42 GR A A A+A NR C CCC Sbjct: 120 GRDAVALALAANRRCCCCC 176
>LOC_Os06g23560:12006.t02168:unspliced-genomic anthocyanidin 5,3-O-glucosyltransferase, putative, expressed| Length = 2114 Score = 32.7 bits (65), Expect(2) = 3.3 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -1 / -1 Query: 257 GGQRRCRGMTWLPRESLEGPLEARSTVA 174 G + R RG P+ESL GPLEAR +A Sbjct: 1202 GVRLRARGRAQRPQESLLGPLEARGHLA 1119 Score = 23.5 bits (45), Expect(2) = 3.3 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = -2 / -2 Query: 1078 LSSNPIF**DVSNVNFLHCYVS 1013 L+S PIF N F+HC S Sbjct: 1456 LTSMPIFISSTMNTLFIHCSAS 1391
>LOC_Os01g62390:12001.t05614:unspliced-genomic growth regulator protein, putative, expressed| Length = 2608 Score = 28.1 bits (55), Expect(2) = 4.1 Identities = 9/20 (45%), Positives = 15/20 (75%) Frame = +1 / -2 Query: 1147 HIRTKTKFSHQIYLYLEWSK 1206 ++++K F+ I +YLEWSK Sbjct: 1560 YLKSKETFADTICIYLEWSK 1501 Score = 22.6 bits (43), Expect(2) = 4.1 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 / -3 Query: 1003 ISYMKHSNEEN*HL 1044 ISY + NEEN HL Sbjct: 1700 ISYDQEGNEENFHL 1659
>LOC_Os03g22490:12003.t02000:unspliced-genomic heavy metal-associated domain containing protein, expressed| Length = 1859 Score = 28.6 bits (56), Expect(2) = 4.2 Identities = 19/63 (30%), Positives = 25/63 (39%) Frame = +1 / -2 Query: 70 ATAVANADRPSSRRGPASAPNVPH*CASRRCMFTAATVDRASSGPSRLSRGSHVIPRQRL 249 A A A P++ A + P SRR +AA +S +R S G PR Sbjct: 1210 AAAAAARSTPAAVGAAAWSTPAPAAARSRRRSSSAAPCGSSSPAAARRSTGRGSAPRAAC 1031 Query: 250 CPP 258 PP Sbjct: 1030 APP 1022 Score = 22.1 bits (42), Expect(2) = 4.2 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +3 / -2 Query: 18 SSLVLPIGAATATYAVHGYSSCECRST 98 ++ LP AATAT A ++ RST Sbjct: 1264 TAAALPAAAATATAAGIAAAAAAARST 1184
>LOC_Os08g01880:12008.t00087:unspliced-genomic expressed protein| Length = 1981 Score = 33.6 bits (67), Expect = 4.2 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +2 / -3 Query: 53 YICGSWLQQLRMQIDRLRGVDLHQHQMYLTDVRRGGACSLPPPSTVPQVALRGFH 217 YI + ++ + I + LH H + ++++ G CSLPPP+ V L H Sbjct: 1712 YIRIAMYKRRSISIYMFTALSLHFHHLIISNILYLGNCSLPPPALFSLVQLSIHH 1548
>LOC_Os07g36130:12007.t03285:unspliced-genomic histone H2A.2, putative, expressed| Length = 1157 Score = 33.6 bits (67), Expect = 4.2 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -1 / -3 Query: 662 CWISRFWTRWWRPRTSW 612 CW SR RWWR R +W Sbjct: 762 CWASRRRWRWWRRRAAW 712
>LOC_Os07g07430:12007.t00621:unspliced-genomic CCR4-NOT transcription complex subunit 7, putative| Length = 1110 Score = 33.6 bits (67), Expect = 4.2 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = -2 / +2 Query: 373 CTTVLHWNLTVMATCAANRPRRALSSTCGA 284 CTT W T ATCAA SS CGA Sbjct: 863 CTTWARWRGTAPATCAAGWSASPGSSACGA 952
>LOC_Os06g49750:12006.t04659:unspliced-genomic expressed protein| Length = 1348 Score = 33.6 bits (67), Expect = 4.2 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +3 / +3 Query: 171 CRHRRPCLKWPFEAFTGQPCHPAAAPLSSTTCR 269 CR RRPC P + C P+ P +S++ R Sbjct: 468 CRRRRPCSGTPPSSLAASRCSPSPPPAASSSSR 566
>LOC_Os05g05140:12005.t00404:unspliced-genomic expressed protein| Length = 3512 Score = 33.6 bits (67), Expect = 4.2 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -1 / -2 Query: 56 CSCCCTNRENKRGRRGNS 3 C+C CT R KR RRGN+ Sbjct: 667 CACACT*RRKKRNRRGNT 614
>LOC_Os04g48820:12004.t04398:unspliced-genomic deoxyribonuclease ycfH, putative, expressed| Length = 4724 Score = 33.6 bits (67), Expect = 4.2 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = -3 / +2 Query: 1467 CSNKEISF*SVLNKL*FCFHKFHISTNCFSTVLI 1366 C +++ *S+ ++L C HK H++++CFS + I Sbjct: 2597 CLRQQMPI*SIRSRLPNC*HK*HVTSDCFSPISI 2698
>LOC_Os01g59060:12001.t05298:unspliced-genomic 50S ribosomal protein L34, chloroplast precursor, putative,| expressed Length = 1870 Score = 33.6 bits (67), Expect = 4.2 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = -2 / +2 Query: 727 APAPPHILCILCTLDMPNSTKNVGS 653 +P PPH+L +CTL +P+S ++V + Sbjct: 257 SPLPPHLLVRMCTLLVPDSLRSVAT 331
>LOC_Os03g57960:12003.t05057:unspliced-genomic globulin-1 S allele precursor, putative, expressed| Length = 2911 Score = 28.1 bits (55), Expect(3) = 4.4 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = -2 / +3 Query: 433 PLATGSGPTHVREGDSSESCCTT 365 P + + PTH S+ SCC+T Sbjct: 483 PAPSSTPPTHTAPSGSASSCCST 551 Score = 24.9 bits (48), Expect(3) = 4.4 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -1 / +2 Query: 311 TCPIIDVRGKDLTSSTCGGGQRRCR 237 TCP R S++ GGG RR R Sbjct: 2141 TCPAAARRSAGSASASTGGGGRRNR 2215 Score = 23.1 bits (44), Expect(3) = 4.4 Identities = 6/13 (46%), Positives = 7/13 (53%) Frame = -1 / +3 Query: 662 CWISRFWTRWWRP 624 CW +RWW P Sbjct: 264 CWRGSPTSRWWAP 302
>LOC_Os08g35670:12008.t03307:unspliced-genomic expressed protein| Length = 5042 Score = 26.7 bits (52), Expect(2) = 5.2 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +2 / -1 Query: 98 RLRGVDLHQHQMYLTDVRRGGACSLPPPST 187 RLR H + + G C++PPPST Sbjct: 1931 RLRHQRQHWQRHWPESFLPGSTCAMPPPST 1842 Score = 23.5 bits (45), Expect(2) = 5.2 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +1 / -1 Query: 235 PRQRLCPPP 261 PR+R CPPP Sbjct: 1760 PRRRPCPPP 1734
>LOC_Os12g13310:12012.t01199:unspliced-genomic ATP binding protein, putative| Length = 4217 Score = 28.1 bits (55), Expect(2) = 5.3 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = -1 / +1 Query: 263 CGGGQRRCRGMTWLPRESLEGPLEARSTVAA 171 C G +RRCR W R + P + + +A Sbjct: 4075 CSGTRRRCRRRRWWRRSTSRSPAPSSTPTSA 4167 Score = 22.1 bits (42), Expect(2) = 5.3 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = -1 / +1 Query: 422 RIWTNACSGRRQQ 384 R WT CSG R++ Sbjct: 4057 RWWTRRCSGTRRR 4095
>LOC_Os11g31590:12011.t02756:unspliced-genomic armadillo/beta-catenin-like repeat family protein, expressed| Length = 1428 Score = 33.1 bits (66), Expect = 5.8 Identities = 21/53 (39%), Positives = 27/53 (50%) Frame = +1 / +2 Query: 97 PSSRRGPASAPNVPH*CASRRCMFTAATVDRASSGPSRLSRGSHVIPRQRLCP 255 P +RR P +P+ A+ R T+AT RASSG SR S PR+ P Sbjct: 980 PRARRPPWRSPSSATSPATARRAGTSATPSRASSGCSRPSPPPRGTPRRGRSP 1138
>LOC_Os07g38490:12007.t03514:unspliced-genomic GDP-fucose protein-O-fucosyltransferase 2, putative, expressed| Length = 3975 Score = 33.1 bits (66), Expect = 5.8 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -2 / +1 Query: 604 VWQLR*QRCNMIVFVHRTSSPTTASSSGQTAM 509 ++ LR QR ++ +RT++PT SSSG A+ Sbjct: 379 LYLLRSQRSGLLALFNRTAAPTNGSSSGSNAV 474
>LOC_Os01g55880:12001.t04997:unspliced-genomic hemimethylated DNA binding domain containing protein| Length = 3903 Score = 33.1 bits (66), Expect = 5.8 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -1 / -1 Query: 293 VRGKDLTSSTCGGGQRRCRGMTWLPRESLEGPLE 192 V G +SS GG RR RG+T +PR + P E Sbjct: 300 VAGHGSSSSKSDGGGRRRRGLTTMPRRGSQRPRE 199
>LOC_Os06g47730:12006.t04459:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 5894 Score = 32.7 bits (65), Expect(2) = 6.0 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +1 / -1 Query: 169 TAATVDRASSGPSRLSRGSHVIPRQRLCPPPHVDEVKSLPRTS 297 T +T R SSG SR +R S + + PPP + PR+S Sbjct: 743 TTSTTQRPSSGSSRPARSSSLGSLHPVAPPPPTPLLPRRPRSS 615 Score = 24.0 bits (46), Expect(2) = 6.0 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = +3 / -3 Query: 156 EVHVHCRHRRP 188 + HVH RH RP Sbjct: 1170 DAHVHARHMRP 1138
>LOC_Os03g36390:12003.t03109:unspliced-genomic conserved hypothetical protein| Length = 450 Score = 29.0 bits (57), Expect(2) = 6.4 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +1 / -2 Query: 187 RASSGPSRLSRGSHVIPRQRLCPPPHV 267 R+S PS R V PR+R PPP V Sbjct: 113 RSSRTPSAACRPPFVAPRRRSSPPPPV 33 Score = 24.0 bits (46), Expect(2) = 6.4 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +3 / -2 Query: 15 PSSLVLPIGAATATY 59 P+SLVLPI +A T+ Sbjct: 404 PNSLVLPIASAPCTH 360
>LOC_Os12g01210:12012.t00020:unspliced-genomic HCF152, putative, expressed| Length = 2464 Score = 30.4 bits (60), Expect(2) = 6.8 Identities = 21/64 (32%), Positives = 24/64 (37%) Frame = +1 / -1 Query: 97 PSSRRGPASAPNVPH*CASRRCMFTAATVDRASSGPSRLSRGSHVIPRQRLCPPPHVDEV 276 P +R P + P P S TAA A+S P S GS PR P P Sbjct: 1972 PPARTRPPAPPPPPRPPPSPLSPPTAAAPPPAASPPRSPSPGSRTSPRPAALPAPSSSPP 1793 Query: 277 KSLP 288 S P Sbjct: 1792 PSSP 1781 Score = 24.9 bits (48), Expect(2) = 6.8 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +2 / -3 Query: 749 LLEQARAQPPEERDLDAASWLA 814 LLE+A A+ ER+L + W A Sbjct: 560 LLERAEAEEARERELASRRWRA 495
>LOC_Os10g34740:12010.t02773:unspliced-genomic protein arginine N-methyltransferase 6, putative, expressed| Length = 4661 Score = 25.4 bits (49), Expect(2) = 7.0 Identities = 12/35 (34%), Positives = 14/35 (40%) Frame = +2 / +1 Query: 314 WAICSAGRHHGQVPVENSGTTRLTAVSFPNMRWSR 418 W + GRH P T+R T S R SR Sbjct: 142 WGLLLWGRHRRPAPTTTWPTSRRTPTSASTRRCSR 246 Score = 24.4 bits (47), Expect(2) = 7.0 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +3 / +1 Query: 225 PCHPAAAPLSSTTCR 269 PC PAA ++ TCR Sbjct: 55 PCSPAARMAATATCR 99
>LOC_Os06g49120:12006.t04596:unspliced-genomic nmrA-like family protein, expressed| Length = 4227 Score = 25.4 bits (49), Expect(2) = 7.1 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 / +1 Query: 180 GGGSEHAPPRRTSVR 136 GGG+ A PRRT VR Sbjct: 619 GGGAGRAHPRRTHVR 663 Score = 24.4 bits (47), Expect(2) = 7.1 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -1 / +3 Query: 260 GGGQRRCRGMTW 225 G G+RR RG+TW Sbjct: 462 GRGRRRRRGLTW 497
>LOC_Os04g51950:12004.t04671:unspliced-genomic serine/threonine protein kinase, putative, expressed| Length = 4028 Score = 27.6 bits (54), Expect(2) = 7.1 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +2 / -3 Query: 431 WPSFYPSLLIQCDIH*SDSPCSHVC 505 W S P+LL+ DI PC VC Sbjct: 663 WESLDPTLLLSTDIATEPPPCVLVC 589 Score = 22.1 bits (42), Expect(2) = 7.1 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = +2 / -1 Query: 494 SHVCMHGSLARTRR 535 SH C HG R RR Sbjct: 515 SHQCRHGRRRRRRR 474
>LOC_Os11g08400:12011.t00731:unspliced-genomic expressed protein| Length = 3472 Score = 24.9 bits (48), Expect(2) = 7.2 Identities = 13/50 (26%), Positives = 18/50 (36%) Frame = -1 / +3 Query: 314 KTCPIIDVRGKDLTSSTCGGGQRRCRGMTWLPRESLEGPLEARSTVAAVN 165 ++CP RG + TC CR S P A ST + + Sbjct: 1671 RSCPGSSARGGGRPARTCSRSTSSCRRPRSRSPTSRRAPSRATSTTCSTS 1820 Score = 24.9 bits (48), Expect(2) = 7.2 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = -1 / +2 Query: 56 CSCCCTNRENKR 21 CSCCC R +R Sbjct: 1922 CSCCCRRRWTRR 1957
>LOC_Os06g01440:12006.t00043:unspliced-genomic integral membrane protein, expressed| Length = 5312 Score = 30.4 bits (60), Expect(2) = 7.4 Identities = 17/46 (36%), Positives = 19/46 (41%) Frame = +1 / -2 Query: 85 NADRPSSRRGPASAPNVPH*CASRRCMFTAATVDRASSGPSRLSRG 222 + R S R AS P VP + RC SS PSR RG Sbjct: 5026 SGSRGGSSRSSASVPRVPCPWPAARCTPATPPPPPPSSSPSRRRRG 4889 Score = 25.8 bits (50), Expect(2) = 7.4 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = +2 / -1 Query: 1601 LPCALHTCQMSIW 1639 +PC LHTC +W Sbjct: 3413 MPCRLHTCISFLW 3375
>LOC_Os02g15610:12002.t01354:unspliced-genomic 40S ribosomal protein S15a, putative, expressed| Length = 2490 Score = 26.7 bits (52), Expect(2) = 7.4 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = -1 / +1 Query: 1124 IYYLSYFFIEINSINVIK*SYILIRRFKC*FSSLL 1020 +++LS+F ++I S + K ++ + FKC* +L Sbjct: 1321 LFFLSFFTLQIVSWRIKKLKFL*VLGFKC*IFYVL 1425 Score = 23.1 bits (44), Expect(2) = 7.4 Identities = 9/31 (29%), Positives = 15/31 (48%) Frame = -1 / +2 Query: 1280 VKLLFLFSYGRLRVPLRYTVISYVCLDHSRY 1188 +K++ L GR+ P + + C H RY Sbjct: 1181 LKIVRLLLIGRILEPRK*NNTEFGCFQHGRY 1273
>LOC_Os09g07990:12009.t00595:unspliced-genomic vegetative cell wall protein gp1 precursor, putative| Length = 1587 Score = 25.8 bits (50), Expect(2) = 7.6 Identities = 10/31 (32%), Positives = 14/31 (45%) Frame = +3 / +3 Query: 87 CRSTVFEAWTCISTKCTSLMCVEEVHVHCRH 179 C +T CI+ CTS CV + C + Sbjct: 915 CYATRRHCSPCIAHACTSSSCVTQASFSCSY 1007 Score = 24.0 bits (46), Expect(2) = 7.6 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = +3 / +3 Query: 42 AATATYAVHGYSSCECRSTVFEAW 113 +A Y + Y++C C S AW Sbjct: 780 SAARAYPSYSYTACACSSC*CAAW 851
>LOC_Os02g22260:12002.t02014:unspliced-genomic fruit protein PKIWI502, putative, expressed| Length = 11685 Score = 29.0 bits (57), Expect(2) = 7.9 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 / +1 Query: 186 PCLKWPFEAFTGQPCHPAAAPLSS 257 PC +W +G C P A+PLSS Sbjct: 160 PCPQWARCPSSGAECAPVASPLSS 231 Score = 28.1 bits (55), Expect(2) = 7.9 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +3 / +3 Query: 459 YSVISINLIPHVLMYACMAVWPEL 530 +S++ +NL V+++ MAVW EL Sbjct: 11094 FSIVQMNLSVFVVLFFWMAVWYEL 11165
>LOC_Os07g27110:12007.t02406:unspliced-genomic RNA recognition motif family protein, expressed| Length = 4783 Score = 32.7 bits (65), Expect = 8.0 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -1 / +2 Query: 659 WISRFWTRWWRPRTSWQ 609 W R+W +WWR R W+ Sbjct: 179 WRRRWWRKWWRRRRRWR 229
>LOC_Os06g15730:12006.t01446:unspliced-genomic expressed protein| Length = 3934 Score = 32.7 bits (65), Expect = 8.0 Identities = 9/22 (40%), Positives = 10/22 (45%) Frame = -1 / +2 Query: 692 YTRHAQFNQECWISRFWTRWWR 627 Y RH+ CW W WWR Sbjct: 3578 YKRHSSSFGTCWNMSIWVHWWR 3643
>LOC_Os06g11090:12006.t00986:unspliced-genomic gibberellin receptor GID1L2, putative, expressed| Length = 1700 Score = 32.7 bits (65), Expect = 8.0 Identities = 20/62 (32%), Positives = 27/62 (43%) Frame = +1 / +1 Query: 76 AVANADRPSSRRGPASAPNVPH*CASRRCMFTAATVDRASSGPSRLSRGSHVIPRQRLCP 255 A + + RP RR A++ P AS RC + A+ S P +RG R P Sbjct: 304 AASWSSRPRPRRTTATSTRSPPAPASSRCPSSTASRPSTRSPPRTTTRGRRSRGRSPPPP 483 Query: 256 PP 261 PP Sbjct: 484 PP 489
>LOC_Os02g53340:12002.t04913:unspliced-genomic cyclic nucleotide-gated ion channel 19, putative, expressed| Length = 11170 Score = 32.7 bits (65), Expect = 8.0 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +2 / -1 Query: 155 GGACSLPPPSTVPQVALRGFHGAAMSSRGSASVLHHMSMKLSLCPAR 295 GG C PPPS P ++R HG ++ + M+ +L P + Sbjct: 6007 GGGCWRPPPSGAPATSVRVCHGGRRTAPERLAPSRWMTAPATLTPQK 5867
>LOC_Os02g21410:12002.t01931:unspliced-genomic hypothetical protein| Length = 2055 Score = 32.7 bits (65), Expect = 8.0 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +2 / -1 Query: 716 WRRRKGADFAFLLEQARAQPPEERDLDAASWLASMDSPFGQFGG 847 W R GAD +FL AR PP R+ L ++ GQ GG Sbjct: 339 W*ARTGADPSFLACSARLPPPARRNACLVKELEKKENV*GQRGG 208
>LOC_Os01g48640:12001.t04307:unspliced-genomic expressed protein| Length = 3049 Score = 32.7 bits (65), Expect = 8.0 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = +1 / +1 Query: 151 SRRCMFTAATVDRASSGPSRLSRGSHVIPRQRLCPPPHVDEVKSLPRTSMIGH 309 SRR AATV + +S R RL PP +SLPR GH Sbjct: 277 SRRATSPAATVSSLPTTTRPISHARSPCHRIRLLTPPIRPSSRSLPRLPFTGH 435
>LOC_Os04g34060:12004.t03081:unspliced-genomic hypothetical protein| Length = 507 Score = 25.4 bits (49), Expect(2) = 8.3 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = +3 / +3 Query: 162 HVHCRHRRPCLKWPFEAFTGQPCHP 236 HV R RRPC +G C P Sbjct: 252 HVGARRRRPCPPCSTSIHSGDSCIP 326 Score = 24.4 bits (47), Expect(2) = 8.3 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +1 / +3 Query: 106 RRGPASAPNVPH*CASRRC 162 RR P + PH ASRRC Sbjct: 87 RRRPRPPSSTPHAGASRRC 143
>LOC_Os08g43670:12008.t04092:unspliced-genomic RING-H2 finger protein ATL2B, putative, expressed| Length = 1640 Score = 28.6 bits (56), Expect(2) = 8.6 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -1 / -2 Query: 56 CSCCCTNRENKRGRR 12 CSCCC +RGRR Sbjct: 253 CSCCCCCCRRRRGRR 209 Score = 25.8 bits (50), Expect(2) = 8.6 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -2 / -2 Query: 718 PPHILCILCTLDMPNSTKNVGSADFGLDGGDRER 617 PP L +L L+ + V +A G + GDRER Sbjct: 1192 PPRPLAVLQVLEAHGAAGAVVAAGGGGERGDRER 1091
>LOC_Os02g19450:12002.t01738:unspliced-genomic heat shock protein HSP101, putative, expressed| Length = 2348 Score = 31.3 bits (62), Expect(2) = 8.8 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 / -1 Query: 713 RWRRRKGADFAFLLEQARAQPPEERDLDAASWLASMDS 826 R R R A F + +A QPPE R + W++S +S Sbjct: 623 RHRTRPLASAGFSMLEASMQPPETRPAPRSMWISSTNS 510 Score = 23.5 bits (45), Expect(2) = 8.8 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 / -3 Query: 391 LLPEHALVQIRSLMAKFLPLSL 456 +LP+HA VQ + + LPL L Sbjct: 1230 VLPDHATVQQLRQLEQLLPLVL 1165
>LOC_Os11g02054:12011.t00100:unspliced-genomic expressed protein| Length = 6937 Score = 31.3 bits (62), Expect(2) = 9.2 Identities = 13/18 (72%), Positives = 13/18 (72%) Frame = -1 / -3 Query: 284 KDLTSSTCGGGQRRCRGM 231 K LTSS CG GQ RCR M Sbjct: 590 KFLTSSMCGPGQYRCRWM 537 Score = 24.9 bits (48), Expect(2) = 9.2 Identities = 6/11 (54%), Positives = 6/11 (54%) Frame = -1 / -2 Query: 644 WTRWWRPRTSW 612 W RWW R W Sbjct: 6621 WGRWWSTRRRW 6589
>LOC_Os01g45910:12001.t04044:unspliced-genomic plastidic ATP/ADP-transporter, putative, expressed| Length = 4171 Score = 26.7 bits (52), Expect(2) = 9.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +2 / +1 Query: 176 PPSTVPQVALRGFHGAAMSSRGSASVLH 259 PPS P +A RG AA S ++LH Sbjct: 22 PPSASPHLASRGARRAAAPPMESLALLH 105 Score = 22.6 bits (43), Expect(2) = 9.5 Identities = 9/23 (39%), Positives = 12/23 (52%) Frame = +1 / +2 Query: 235 PRQRLCPPPHVDEVKSLPRTSMI 303 PR PPP +S PR+S + Sbjct: 167 PRASPSPPPRRPPYRSSPRSSSL 235
>LOC_Os02g01760:12002.t00076:unspliced-genomic diphosphomevalonate decarboxylase family protein| Length = 4039 Score = 26.3 bits (51), Expect(2) = 9.5 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +2 / +3 Query: 173 PPPSTVPQVALRGFHGAAMSSRGSASVLHHMSMKL 277 PPP P G ++R S+S+L H+S L Sbjct: 2037 PPPPPSPSALPSPPTGCGSTARSSSSLLFHLSALL 2141 Score = 23.1 bits (44), Expect(2) = 9.5 Identities = 8/15 (53%), Positives = 8/15 (53%) Frame = +2 / +3 Query: 149 RRGGACSLPPPSTVP 193 RRG CS PP P Sbjct: 1896 RRGSGCSWPPADLPP 1940
>LOC_Os01g61940:12001.t05570:unspliced-genomic ATPase, coupled to transmembrane movement of substances, putative,| expressed Length = 2642 Score = 25.8 bits (50), Expect(2) = 9.8 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 / -3 Query: 118 ASAPNVPH*CASRRCMFTAATVDRASSGPSRLSRGS 225 +SAP+ P SRRC T R S P+ +R S Sbjct: 1422 SSAPSSPPRTGSRRCASTPPRRPRPSRTPASRARCS 1315 Score = 23.5 bits (45), Expect(2) = 9.8 Identities = 9/27 (33%), Positives = 16/27 (59%) Frame = +2 / -2 Query: 209 GFHGAAMSSRGSASVLHHMSMKLSLCP 289 G HG++ +A + H+ +KL+ CP Sbjct: 1285 GAHGSSFGLCLAACMTCHVLLKLTSCP 1205
>LOC_Os01g41570:12001.t03678:unspliced-genomic mitochondrion protein, putative, expressed| Length = 7522 Score = 31.3 bits (62), Expect(2) = 9.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 / -2 Query: 169 TAATVDRASSGPSRLSRGSHVIPRQRLCPPPHV 267 T++ A+S PS +R + R RL PPPH+ Sbjct: 3363 TSSFTRSATSRPSPCARTTTACSRARLTPPPHI 3265 Score = 24.9 bits (48), Expect(2) = 9.8 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 / -2 Query: 479 SDSPCSHVCMHGSLARTRRGGGRTSP 556 +++P S SLA TRR GGR P Sbjct: 2556 AEAPTSPHSDTSSLAGTRRKGGRRRP 2479 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 737,827,152 Number of extensions: 12682742 Number of successful extensions: 60335 Number of sequences better than 10.0: 61 Length of query: 571 Length of database: 55,613,886 Length adjustment: 51 Effective length of query: 520 Effective length of database: 52,743,708 Effective search space: 27426728160 Effective search space used: 27426728160 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
