ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf17c22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os08g0192400:Os08g0192400 221 7e-58
2AK062600:Os04g0274400 38 0.014
3Os02g0649400:Os02g0649400 29 4.9
4Os05g0157600:Os05g0157600 29 4.9
5Os06g0115600:Os06g0115600 29 6.4
6AK069482:Os01g0654100 28 8.3
7AK062263:Os01g0654100 28 8.3
8Os04g0563900:Os04g0563900 28 8.4
9AK120621:Os06g0231400 28 8.4
10AK072084:Os06g0231400 28 8.4

>Os08g0192400:Os08g0192400 |
          Length = 342
 Score =  221 bits (563), Expect = 7e-58
 Identities = 118/186 (63%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
 Frame = +1

Query: 1   KSKEGEEKRMTQEEMLLEAAETEIMNMRNXXXXXXXXXXXXXXXXXXXXXYEGPTLRFHS 180
           K KEGEEKRMTQEEMLLEAAETEI+N+RN                     YEGPT+RF S
Sbjct: 180 KKKEGEEKRMTQEEMLLEAAETEIINLRNLERVLAREEEVKKKAVVHKAVYEGPTIRFCS 239

Query: 181 RDGESRLEFINGASFGSELCTTSTPYPEKSVCVVTGLPAKYRDPKTGLPYATMAAFKIIR 360
           RD                        PEKS+C VTGLPAKYRDPKTGLPYAT  AFKIIR
Sbjct: 240 RDD-----------------------PEKSICAVTGLPAKYRDPKTGLPYATKEAFKIIR 276

Query: 361 ESFLKEEPDKKRPNMSNMGELFESVAGEHSTPKKKRIEGRSP-ISVDLRHGGRFRRIPAL 537
           ESFLKEE D+KRPN++NMGELFES+ GE+STPKK+RIE RSP IS D RHGGRFRRIPAL
Sbjct: 277 ESFLKEEADRKRPNLANMGELFESITGEYSTPKKRRIEARSPSISSDQRHGGRFRRIPAL 336

Query: 538 DVMDED 555
           D++DED
Sbjct: 337 DLLDED 342



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>AK062600:Os04g0274400 |
          Length = 124

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 18/35 (51%), Positives = 20/35 (57%)
 Frame = +1

Query: 256 YPEKSVCVVTGLPAKYRDPKTGLPYATMAAFKIIR 360
           YP K  C +TG  A Y DP+T L YA    FK IR
Sbjct: 69  YPPKRYCDITGFEAPYVDPRTKLRYADPEVFKQIR 103



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>Os02g0649400:Os02g0649400 |
          Length = 397

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 27/85 (31%), Positives = 40/85 (47%)
 Frame = -3

Query: 515 RPPCLRSTDIGDLPSILFFLGVECSPATDSKSSPIFDMLGLFLSGSSFRKLSRMILNAAI 336
           R  CLR+ D G + ++ +  G + +   D+   P+  +L     GS    +  M+L A  
Sbjct: 120 RRECLRTPDDGAV-ALDWVSGDDRALPRDA---PVLILLPGLTGGSDDTYVRHMLLRARN 175

Query: 335 VA*GNPVFGSRYLAGSPVTTQTDFS 261
                 VF SR  AGSPVTT   +S
Sbjct: 176 KGWRVVVFNSRGCAGSPVTTAKFYS 200



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>Os05g0157600:Os05g0157600 |
          Length = 521

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
 Frame = +1

Query: 250 TPYPEKSVCVVTGLPAKYRDPKTGLPYATMAAFKIIRESFLKEEPDKKRPNMSNM----G 417
           +P   KSV   +G       PK+  P A     K   +S L E  D  R +   +     
Sbjct: 2   SPKRRKSVAASSG------GPKSS-PAARSTRSKSKPDSDLAEHDDSPRSSSGRLTRSRA 54

Query: 418 ELFESVAGEHSTPKKKRIEGRSP 486
           ++ E  AG  S+ KK+RIE  SP
Sbjct: 55  KVLEESAGVSSSKKKRRIEEESP 77



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>Os06g0115600:Os06g0115600 |
          Length = 530

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +1

Query: 349 KIIRESFLKE--EPDKKRPNMSNMGELFESVAGEHSTPKKKRIE 474
           K  RE  LKE  + D+K+ +++ MG +    A +    KK+R+E
Sbjct: 401 KDFRERILKENLKDDRKKGSLTRMGSISSEQADKGDPTKKRRVE 444



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>AK069482:Os01g0654100 |
          Length = 602

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = -3

Query: 500 RSTDIGDLPSILFFLGVECSPATDS---KSSPIFDMLGLFLSGSSFRKLSRMILNAAIVA 330
           R  +I +LPS  FF+GV+  P   S   K SP+F  LGL  + S   +L  ++  ++ + 
Sbjct: 509 RRMEIIELPSHKFFIGVQFHPEFKSRPGKPSPLF--LGLIAAASG--QLETLLQPSSNIV 564

Query: 329 *GNPV 315
             NP+
Sbjct: 565 NPNPM 569



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>AK062263:Os01g0654100 |
          Length = 299

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = -3

Query: 500 RSTDIGDLPSILFFLGVECSPATDS---KSSPIFDMLGLFLSGSSFRKLSRMILNAAIVA 330
           R  +I +LPS  FF+GV+  P   S   K SP+F  LGL  + S   +L  ++  ++ + 
Sbjct: 206 RRMEIIELPSHKFFIGVQFHPEFKSRPGKPSPLF--LGLIAAASG--QLETLLQPSSNIV 261

Query: 329 *GNPV 315
             NP+
Sbjct: 262 NPNPM 266



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>Os04g0563900:Os04g0563900 |
          Length = 386

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 21/71 (29%), Positives = 30/71 (42%)
 Frame = -2

Query: 717 AVGRSPASPHANHMQPHRQRSLSSHANMASYATMPSDLSSVTWQPMQPHCQRTSVLVHHI 538
           A  R+PA  H    Q   Q S     N+A+ A  P++  S    P +     +S   HH 
Sbjct: 14  ATVRAPAQGHHGRRQDSDQIS-----NLAAEAAAPANRRSPIMAPPKALASMSSAAGHHS 68

Query: 537 KSRYSSEASTV 505
             R SS  S++
Sbjct: 69  GMRSSSSMSSI 79



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>AK120621:Os06g0231400 |
          Length = 602

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 620 VAYDAMLA*LDRDLW-RCGCI*LAWGLAGDLPTAWLLKMPC 739
           +  DA LA    D++ +CGC+  AWG+   LP   L    C
Sbjct: 261 IEVDAKLATAVVDMYCKCGCVDEAWGVFDSLPARGLTTWNC 301



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>AK072084:Os06g0231400 |
          Length = 602

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 620 VAYDAMLA*LDRDLW-RCGCI*LAWGLAGDLPTAWLLKMPC 739
           +  DA LA    D++ +CGC+  AWG+   LP   L    C
Sbjct: 261 IEVDAKLATAVVDMYCKCGCVDEAWGVFDSLPARGLTTWNC 301


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 28,705,781
Number of extensions: 625124
Number of successful extensions: 1544
Number of sequences better than 10.0: 10
Number of HSP's gapped: 1541
Number of HSP's successfully gapped: 10
Length of query: 353
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 251
Effective length of database: 11,315,673
Effective search space: 2840233923
Effective search space used: 2840233923
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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