Clone Information

BLAST Search Result

Clone Name	FLbaf13p23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Os12g0204800:Os12g0204800	30	0.43
2	AK102113:Os10g0161400	27	2.8
3	AK103215:Os11g0244800	27	3.7
4	AK073765:Os09g0337300	27	3.7

>Os12g0204800:Os12g0204800 |
          Length = 651
 Score = 30.0 bits (66), Expect = 0.43
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 202 HHKVVRDDQHEYEDAQEVGEETQVLVVKHLAG 107
           HH  +  D  E+ED Q+VGEE    + K L G
Sbjct: 375 HHAFINPDPQEFEDFQQVGEE----IAKKLRG 402

to top

>AK102113:Os10g0161400 |
          Length = 804

 Score = 27.3 bits (59), Expect = 2.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 201 ITKWYAMTSTNMKMPRKLVKKPKSWSSNI 115
           +T+   +  + +K+ RKL+K+ K WSS I
Sbjct: 101 VTQTNCVHISRLKLRRKLLKRKKKWSSRI 129

to top

>AK103215:Os11g0244800 |
          Length = 254

 Score = 26.9 bits (58), Expect = 3.7
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 317 KELSSALTPLTNMFPYLLSV*YGLIAKQ-KEISSRTSGLPSQSGTR*PAR 171
           KE    L  + N  P +  V  G   KQ KE + +TSG  ++SGT+ P+R
Sbjct: 115 KESRKRLFSMINNLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTK-PSR 163

to top

>AK073765:Os09g0337300 |
          Length = 467

 Score = 26.9 bits (58), Expect = 3.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 196 KVVRDDQHEYEDAQEVGEETQVLVV 122
           K+V  D  E ED++ + E TQV+ V
Sbjct: 261 KIVEKDDDEQEDSKTITESTQVMAV 285


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 9,335,614
Number of extensions: 187539
Number of successful extensions: 391
Number of sequences better than 10.0: 4
Number of HSP's gapped: 391
Number of HSP's successfully gapped: 4
Length of query: 124
Length of database: 15,399,855
Length adjustment: 88
Effective length of query: 36
Effective length of database: 11,876,247
Effective search space: 427544892
Effective search space used: 427544892
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result