ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf17b04 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os08g28230:12008.t02580:unspliced-genomic protein aq_1857, putative, expressed| Length = 2656 Score = 92.7 bits (196), Expect(4) = 2e-41 Identities = 36/48 (75%), Positives = 43/48 (89%) Frame = +3 / +2 Query: 207 NCVRRLKELHTKEPSAKGNMLRLSVEAGGCSGFQYTFSLDNKENADDR 350 N +RLKELH KEP ++G MLRLSVEAGGCSGFQY+FSLD+K+N+DDR Sbjct: 1448 NASQRLKELHAKEPPSEGKMLRLSVEAGGCSGFQYSFSLDDKKNSDDR 1591 Score = 80.8 bits (170), Expect(4) = 2e-41 Identities = 34/41 (82%), Positives = 38/41 (92%) Frame = +3 / +1 Query: 348 RVFEKKGVKLVVDNVSYDFVKGSTVDYVEELISSAFVVSTN 470 R+FEK+GVKLVVD+VSYDFVKG+TVDY EELI SAFVVS N Sbjct: 1771 RIFEKEGVKLVVDDVSYDFVKGATVDYEEELIRSAFVVSLN 1893 Score = 38.2 bits (77), Expect(4) = 2e-41 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = +2 / +1 Query: 452 IRGFNQSKCCWRLQLQEFLHG*IIRSLV 535 + G N+S C W LQLQEF +G ++ +LV Sbjct: 2344 LAGINKS*CSWGLQLQEFFYGQLVSALV 2427 Score = 23.5 bits (45), Expect(4) = 2e-41 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = +2 / +3 Query: 647 ILCNLLLY*NIFVMWVHTHWW 709 ++C+ +LY*NI ++ T W+ Sbjct: 2442 VICDSILY*NILH*YMCTIWY 2504 Score = 66.6 bits (139), Expect(4) = 6e-29 Identities = 30/38 (78%), Positives = 32/38 (84%) Frame = -1 / -3 Query: 460 TTNAELINSST*STVEPFTKSYETLSTTNLTPFFSNTL 347 TTNAE I+SS+*STV PFTKSYET STTNLTP FS L Sbjct: 1883 TTNAERISSSS*STVAPFTKSYETSSTTNLTPSFSKIL 1770 Score = 62.0 bits (129), Expect(4) = 6e-29 Identities = 29/52 (55%), Positives = 32/52 (61%) Frame = -1 / -2 Query: 346 SSAFSLLSSEKVY*NPEQPPASTLKRNMLPLADGSFVCNSLSLRTQLSVMLT 191 SS F L S EK Y NPE PPASTL R++LP GS CNS +L LS T Sbjct: 1587 SSEFFLSSREKEYWNPEHPPASTLNRSILPSEGGSLACNSFNLCEALSFQRT 1432 Score = 42.3 bits (86), Expect(4) = 6e-29 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -1 / -2 Query: 517 LTMKELLQLQPPTALGLVET 458 LT+KELLQLQPPTALG V+T Sbjct: 2409 LTIKELLQLQPPTALGFVDT 2350 Score = 21.7 bits (41), Expect(4) = 6e-29 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -1 / -3 Query: 112 RKRLLARMRLFSNSARRRSGG 50 R+R LAR R +A RRS G Sbjct: 89 RRRWLARTRPPRRAATRRSRG 27 Score = 62.5 bits (130), Expect(3) = 1e-21 Identities = 26/38 (68%), Positives = 28/38 (73%) Frame = -3 / -2 Query: 461 NHECRAYQFFYIIDC*TFHKVI*DIVDNQLNTLLLEHP 348 NHEC AY+FF II TFHKVI*DIV NQ NT L+ P Sbjct: 1884 NHECGAYKFFLIIHSGTFHKVI*DIVHNQFNTFFLKDP 1771 Score = 54.7 bits (113), Expect(3) = 1e-21 Identities = 23/42 (54%), Positives = 31/42 (73%) Frame = -3 / -1 Query: 350 PIISIFLVIQ*ESVLKSRTTTSFNAQA*HVALSRWFFRV*LF 225 PII +FLVI+ E +L+SRT+TSFN + H+ RWFF +* F Sbjct: 1591 PII*VFLVIKRERILESRTSTSFNT*SQHLTFRRWFFSM*FF 1466 Score = 30.9 bits (61), Expect(3) = 1e-21 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -2 / -3 Query: 546 SLKVTNDRII*P*RNSCSCSLQQHLDWLKP 457 S + T *P*+NSC+CS Q H D L P Sbjct: 2438 SHQATKAETN*P*KNSCNCSPQLH*DLLIP 2349 Score = 55.6 bits (115), Expect(2) = 4e-15 Identities = 26/42 (61%), Positives = 31/42 (73%) Frame = +3 / +2 Query: 420 VDYVEELISSAFVVSTNPSAVGGCSCKSSFMVK*FDH**L*E 545 + +V+ ++ VSTNPSAVGGCSCKSSFMV *F **L E Sbjct: 2312 IHWVQLILLVILQVSTNPSAVGGCSCKSSFMVN*FQL**LDE 2437 Score = 50.1 bits (103), Expect(2) = 4e-15 Identities = 25/44 (56%), Positives = 29/44 (65%) Frame = +1 / +3 Query: 220 DSKSYTRKNHLLRATCYA*ALKLVVVLDFSTLSHWITRKMLMIG 351 D K+Y KNHLL+ C * LKLV VLD + LS +TRK MIG Sbjct: 1461 D*KNYMLKNHLLKVRCCD*VLKLVDVLDSNILSLLMTRKTQMIG 1592 Score = 52.8 bits (109), Expect(2) = 1e-10 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = +1 / +2 Query: 346 IGCSRRRVLSWLSTMSHMTL*KVQQSIM*KN**ARHSW 459 +G R++VL+WL TMSHMTL*KV IM KN A HSW Sbjct: 1769 VGSLRKKVLNWLWTMSHMTL*KVPLWIMRKNLYAPHSW 1882 Score = 37.3 bits (75), Expect(2) = 1e-10 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = +2 / +1 Query: 224 QRVTHERTIC*GQHVTLER*SWWLFWISVHFLTG*QGK 337 +R+T RT * ++ *SWW+FWI + FL+ *Q K Sbjct: 1465 KRITC*RTTF*R*DAAIKC*SWWMFWIPIFFLS**QEK 1578 Score = 40.5 bits (82), Expect = 0.016 Identities = 19/34 (55%), Positives = 22/34 (64%) Frame = +2 / +3 Query: 359 EEGC*VGCRQCLI*LCERFNSRLCRRIDKLGIRG 460 E C*+GC +CLI*LCER + L R L IRG Sbjct: 1782 ERRC*IGCGRCLI*LCERCHCGL*GRTYTLRIRG 1883 Score = 30.4 bits (60), Expect(2) = 0.14 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 / -1 Query: 545 LSKLLMIELFNHEGTLAAAASNSTWI 468 L KLL ++L +H+ TLA AA N T I Sbjct: 2437 LIKLLKLKLIDHKRTLATAAPNCTRI 2360 Score = 28.6 bits (56), Expect(2) = 0.14 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -2 / -3 Query: 345 HQHFPCYPVRKCTEIQNNHQLQ 280 H F C+ RK IQN HQLQ Sbjct: 1586 HLSFSCHQERKNIGIQNIHQLQ 1521
>LOC_Os08g27630:12008.t02525:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5111 Score = 88.1 bits (186), Expect(4) = 2e-30 Identities = 35/48 (72%), Positives = 41/48 (85%) Frame = +3 / +1 Query: 207 NCVRRLKELHTKEPSAKGNMLRLSVEAGGCSGFQYTFSLDNKENADDR 350 N +RLKELH KEP ++G MLRLSVEAGGCSG QY+FSLD K+N+DDR Sbjct: 1255 NASQRLKELHAKEPPSEGKMLRLSVEAGGCSGLQYSFSLDVKKNSDDR 1398 Score = 46.0 bits (94), Expect(4) = 2e-30 Identities = 22/38 (57%), Positives = 25/38 (65%) Frame = +1 / +1 Query: 346 IGCSRRRVLSWLSTMSHMTL*KVQQSIM*KN**ARHSW 459 +G R+ VL+WL TMSHMTL*KV IM KN SW Sbjct: 1576 VGSLRKMVLNWLWTMSHMTL*KVPLWIMRKNLYTPRSW 1689 Score = 43.2 bits (88), Expect(4) = 2e-30 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +2 / +2 Query: 458 GFNQSKCCWRLQLQEFLHG*IIRSLV 535 G NQSKC W LQLQEF +G ++ +LV Sbjct: 2501 GVNQSKCSWGLQLQEFFYGQLVSALV 2578 Score = 23.5 bits (45), Expect(4) = 2e-30 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = +2 / +1 Query: 647 ILCNLLLY*NIFVMWVHTHWW 709 ++C+ +LY*NI ++ T W+ Sbjct: 2593 VICDSILY*NILH*YMCTIWY 2655 Score = 65.2 bits (136), Expect(3) = 1e-28 Identities = 29/38 (76%), Positives = 31/38 (81%) Frame = -1 / -2 Query: 460 TTNAELINSST*STVEPFTKSYETLSTTNLTPFFSNTL 347 TTN E I+SS+*STV PFTKSYET STTNLTP FS L Sbjct: 1690 TTNVECISSSS*STVAPFTKSYETSSTTNLTPSFSKIL 1577 Score = 62.5 bits (130), Expect(3) = 1e-28 Identities = 29/52 (55%), Positives = 32/52 (61%) Frame = -1 / -1 Query: 346 SSAFSLLSSEKVY*NPEQPPASTLKRNMLPLADGSFVCNSLSLRTQLSVMLT 191 SS F L S EK Y NPE PPASTL R++LP GS CNS +L LS T Sbjct: 1394 SSEFFLTSREKEYCNPEHPPASTLNRSILPSEGGSLACNSFNLCEALSFQRT 1239 Score = 46.4 bits (95), Expect(3) = 1e-28 Identities = 19/26 (73%), Positives = 23/26 (88%) Frame = -1 / -2 Query: 517 LTMKELLQLQPPTALGLVETTNAELI 440 LT+KELLQLQPPTALGLV+T ++I Sbjct: 2560 LTIKELLQLQPPTALGLVDTCRLQVI 2483 Score = 56.1 bits (116), Expect(3) = 3e-21 Identities = 24/38 (63%), Positives = 27/38 (71%) Frame = -3 / -1 Query: 461 NHECRAYQFFYIIDC*TFHKVI*DIVDNQLNTLLLEHP 348 NHE Y+FF II TFHKVI*DIV NQ NT+ L+ P Sbjct: 1691 NHERGVYKFFLIIHSGTFHKVI*DIVHNQFNTIFLKDP 1578 Score = 51.0 bits (105), Expect(3) = 3e-21 Identities = 21/42 (50%), Positives = 30/42 (71%) Frame = -3 / -3 Query: 350 PIISIFLVIQ*ESVLKSRTTTSFNAQA*HVALSRWFFRV*LF 225 PII +FL ++ E +L+SRT+TSFN + H+ RWFF +* F Sbjct: 1398 PII*VFLDVKRERILQSRTSTSFNT*SQHLTFRRWFFSM*FF 1273 Score = 41.4 bits (84), Expect(3) = 3e-21 Identities = 17/30 (56%), Positives = 20/30 (66%) Frame = -2 / -3 Query: 546 SLKVTNDRII*P*RNSCSCSLQQHLDWLKP 457 S + T *P*+NSC+CS Q HLDWL P Sbjct: 2589 SHQATKAETN*P*KNSCNCSPQLHLDWLTP 2500 Score = 79.9 bits (168), Expect(2) = 4e-15 Identities = 37/59 (62%), Positives = 43/59 (72%) Frame = +3 / +3 Query: 294 CSGFQYTFSLDNKENADDRVFEKKGVKLVVDNVSYDFVKGSTVDYVEELISSAFVVSTN 470 C+ F +F+ N R+FEK GVKLVVD+VSYDFVKG+TVDY EELI S FVVS N Sbjct: 1524 CTYFINSFTYLNNCCYTCRIFEKDGVKLVVDDVSYDFVKGATVDYEEELIHSTFVVSLN 1700 Score = 26.7 bits (52), Expect(2) = 4e-15 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = +1 / +1 Query: 463 QPIQVLLEAAAARVPSW 513 QPIQV L AA ARV W Sbjct: 2506 QPIQVQLGAAVARVLLW 2556 Score = 54.2 bits (112), Expect(2) = 1e-13 Identities = 27/39 (69%), Positives = 28/39 (71%) Frame = +3 / +3 Query: 429 VEELISSAFVVSTNPSAVGGCSCKSSFMVK*FDH**L*E 545 V I+ VSTNPSAVGGCSCKSSFMV *F **L E Sbjct: 2472 VTAYITCNLQVSTNPSAVGGCSCKSSFMVN*FQL**LDE 2588 Score = 47.3 bits (97), Expect(2) = 1e-13 Identities = 24/44 (54%), Positives = 28/44 (63%) Frame = +1 / +2 Query: 220 DSKSYTRKNHLLRATCYA*ALKLVVVLDFSTLSHWITRKMLMIG 351 D K+Y KNHLL+ C * LKLV VLD + LS +RK MIG Sbjct: 1268 D*KNYMLKNHLLKVRCCD*VLKLVDVLDCNILSLLTSRKTQMIG 1399 Score = 40.0 bits (81), Expect(2) = 4e-06 Identities = 18/34 (52%), Positives = 22/34 (64%) Frame = +2 / +2 Query: 359 EEGC*VGCRQCLI*LCERFNSRLCRRIDKLGIRG 460 E C*+GC +CLI*LCER + L R L +RG Sbjct: 1589 ERWC*IGCGRCLI*LCERCHCGL*GRTYTLHVRG 1690 Score = 35.9 bits (72), Expect(2) = 4e-06 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +2 / +3 Query: 224 QRVTHERTIC*GQHVTLER*SWWLFWISVHFLT 322 +R+T RT * ++ *SWW+FWI++ FL+ Sbjct: 1272 KRITC*RTTF*R*DAAIKC*SWWMFWIAIFFLS 1370 Score = 40.5 bits (82), Expect = 0.016 Identities = 17/29 (58%), Positives = 22/29 (75%) Frame = -3 / -1 Query: 545 LSKLLMIELFNHEGTLAAAASNSTWIG*N 459 L KLL ++L +H+ TLA AA N TWIG*+ Sbjct: 2588 LIKLLKLKLIDHKRTLATAAPNCTWIG*H 2502
>LOC_Os01g01610:12001.t00059:unspliced-genomic HESB-like domain-containing protein 2, mitochondrial precursor,| putative, expressed Length = 1974 Score = 32.7 bits (65), Expect(3) = 4e-04 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +3 / +1 Query: 345 DRVFEKKGVKLVVDNVSYDFVKGSTVDYVEE 437 D V E KGVK+++D + V G+ +DYV++ Sbjct: 1447 DEVVEDKGVKVLIDPKALMHVIGTKMDYVDD 1539 Score = 28.1 bits (55), Expect(3) = 4e-04 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +3 / +2 Query: 267 LRLSVEAGGCSGFQYTFS 320 LRL V+A GC+G YT + Sbjct: 386 LRLGVKARGCNGLSYTLN 439 Score = 25.4 bits (49), Expect(3) = 4e-04 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +3 / +1 Query: 459 VSTNPSAVGGCSCKSSFM 512 V NP++ G C C SFM Sbjct: 1636 VFINPNSKGECGCGESFM 1689
>LOC_Os05g36270:12005.t03221:unspliced-genomic fructose-1,6-bisphosphatase, cytosolic, putative, expressed| Length = 3000 Score = 33.1 bits (66), Expect = 2.5 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 / +3 Query: 461 FNQSKCCWRLQLQEFLHG 514 +N+ CCW L ++EF+HG Sbjct: 1341 WNRHACCWLLHVREFMHG 1394
>LOC_Os07g25410:12007.t02237:unspliced-genomic methionine aminopeptidase 1B, chloroplast precursor, putative,| expressed Length = 4239 Score = 32.7 bits (65), Expect = 3.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 / +1 Query: 411 GSTVDYVEELISSAFVVSTNPSAVGGCSCK 500 G Y E+ + AF+ +T+PSA G C C+ Sbjct: 1465 GGVTPYTTEMFTVAFLNTTHPSARG*CPCR 1554
>LOC_Os05g11080:12005.t00940:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 8828 Score = 32.2 bits (64), Expect = 4.7 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 / +1 Query: 666 FTRIFLLCGYILIGGLDLARRVLDSLINAW 755 FTR+F+LC ++ G+ R L SLI+ W Sbjct: 5440 FTRLFILCVG*VVNGVRRMHRKLPSLIHKW 5529
>LOC_Os11g40830:12011.t03624:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 3367 Score = 32.2 bits (64), Expect = 4.8 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 / -2 Query: 97 ARMRLFSNSARRRSGGLTEAIAAQCRRCYAAR 2 AR RL S S+RRRS + A AA C A+R Sbjct: 2490 ARSRLVSASSRRRSADSSSAQAASCSASVASR 2395
>LOC_Os11g34590:12011.t03011:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3237 Score = 32.2 bits (64), Expect = 4.8 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 / -2 Query: 97 ARMRLFSNSARRRSGGLTEAIAAQCRRCYAAR 2 AR RL S S+RRRS + A AA C A+R Sbjct: 2465 ARSRLVSASSRRRSADSSSAQAASCAASVASR 2370
>LOC_Os08g40810:12008.t03811:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 936 Score = 32.2 bits (64), Expect = 4.8 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 / -2 Query: 97 ARMRLFSNSARRRSGGLTEAIAAQCRRCYAAR 2 AR RL S S+RRRS + A AA C A+R Sbjct: 164 ARSRLVSASSRRRSADSSSAQAASCAASVASR 69
>LOC_Os06g21190:12006.t01936:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3061 Score = 32.2 bits (64), Expect = 4.8 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 / -2 Query: 97 ARMRLFSNSARRRSGGLTEAIAAQCRRCYAAR 2 AR RL S S+RRRS + A AA C A+R Sbjct: 2448 ARSRLVSASSRRRSADSSSAQAASCAASVASR 2353
>LOC_Os12g30030:12012.t02711:unspliced-genomic HESB-like domain-containing protein 2, mitochondrial precursor,| putative, expressed Length = 2999 Score = 28.1 bits (55), Expect(2) = 5.6 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +3 / +2 Query: 267 LRLSVEAGGCSGFQYTFS 320 LRL V+A GC+G YT + Sbjct: 863 LRLGVKARGCNGLSYTMN 916 Score = 25.4 bits (49), Expect(2) = 5.6 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +3 / +2 Query: 459 VSTNPSAVGGCSCKSSFM 512 V NP++ G C C SFM Sbjct: 2360 VFMNPNSKGECGCGESFM 2413
>LOC_Os03g30980:12003.t02701:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3669 Score = 31.8 bits (63), Expect = 6.5 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -3 / -2 Query: 563 SSVKLPLSKLLMIELFNHEGTLAAAASNSTW 471 SS++LP+ L LF+HE AA +S S W Sbjct: 3449 SSIRLPMPSSLAQALFSHEMYPAADSSRSPW 3357
>LOC_Os04g43970:12004.t03937:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2529 Score = 31.8 bits (63), Expect = 6.5 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 / -2 Query: 97 ARMRLFSNSARRRSGGLTEAIAAQCRRCYAAR 2 AR RL S S+RRRS + A AA C A+R Sbjct: 1823 ARPRLVSASSRRRSADSSSAQAASCAASVASR 1728
>LOC_Os04g35470:12004.t03217:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1595 Score = 31.8 bits (63), Expect = 6.5 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = -1 / -2 Query: 103 LLARMRLFSNSARRRSGGLTEAIAAQCRRCYAAR 2 L AR R S+S+RRRS + A AA C A+R Sbjct: 1465 LRARSRSVSSSSRRRSADSSSAQAASCTASVASR 1364
>LOC_Os02g44040:12002.t03989:unspliced-genomic expressed protein| Length = 1770 Score = 31.8 bits (63), Expect = 6.5 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -2 / -2 Query: 378 PT*HPSSRTPYHQHFPC 328 P HP P+H HFPC Sbjct: 98 PPPHPPQHVPFHPHFPC 48
>LOC_Os11g26850:12011.t02299:unspliced-genomic adenosylhomocysteinase, putative, expressed| Length = 3026 Score = 31.3 bits (62), Expect = 8.9 Identities = 11/20 (55%), Positives = 17/20 (85%) Frame = -3 / -3 Query: 524 ELFNHEGTLAAAASNSTWIG 465 E+F+ E +AAAA++S+WIG Sbjct: 120 EVFSTESAMAAAAASSSWIG 61
>LOC_Os11g15570:12011.t01386:unspliced-genomic expressed protein| Length = 1509 Score = 31.3 bits (62), Expect = 9.0 Identities = 9/28 (32%), Positives = 17/28 (60%) Frame = -2 / -3 Query: 378 PT*HPSSRTPYHQHFPCYPVRKCTEIQN 295 P +P + + YH +PCYP+ + I++ Sbjct: 1441 PLLNPQTVSTYHPFYPCYPIYRAIPIES 1358
>LOC_Os10g36140:12010.t02899:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3298 Score = 31.3 bits (62), Expect = 9.0 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 / -2 Query: 97 ARMRLFSNSARRRSGGLTEAIAAQCRRCYAAR 2 AR RL S S+RRRS + A AA C A+R Sbjct: 2526 ARSRLVSASSRRRSVNSSSAQAASCATSVASR 2431
>LOC_Os10g20000:12010.t01497:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3133 Score = 31.3 bits (62), Expect = 9.0 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = -1 / -2 Query: 103 LLARMRLFSNSARRRSGGLTEAIAAQCRRCYAAR 2 L AR RL S S+RRRS + A AA C +R Sbjct: 2367 LRARSRLVSASSRRRSADSSSAQAASCTASVTSR 2266
>LOC_Os08g07774:12008.t00665:unspliced-genomic disease resistance protein RPM1, putative, expressed| Length = 8652 Score = 31.3 bits (62), Expect = 9.0 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = +1 / +1 Query: 325 ITRKMLMIGCSRRRVLSWLSTMSHMT 402 I RK+ +IGC R+V +W+S++ +T Sbjct: 6064 IIRKLHIIGCYIRKVPNWMSSLGSLT 6141
>LOC_Os05g49560:12005.t04389:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4652 Score = 31.3 bits (62), Expect = 9.0 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -1 / -1 Query: 97 ARMRLFSNSARRRSGGLTEAIAAQCRRCYAAR 2 AR R S+S+RRRS + A AA C A+R Sbjct: 2396 ARFRSVSSSSRRRSADSSSAQAASCAASVASR 2301
>LOC_Os04g10270:12004.t00860:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3113 Score = 31.3 bits (62), Expect = 9.0 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 / -2 Query: 97 ARMRLFSNSARRRSGGLTEAIAAQCRRCYAAR 2 AR RL S S+RRRS + A AA C A+R Sbjct: 2341 ARSRLVSASSRRRSVNSSSAQAASCAASVASR 2246
>LOC_Os01g66420:12001.t06003:unspliced-genomic PHD finger protein, putative, expressed| Length = 4715 Score = 31.3 bits (62), Expect = 9.0 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -2 / -3 Query: 369 HPSSRTPYHQHFPCYPVRKCTEIQNNHQLQRSSVTCC 259 HP P+H HFP +P I N QL ++ C Sbjct: 4278 HPPLPLPHHHHFPLHPWGLTA*ISNETQLLTAAERNC 4168 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 248,190,676 Number of extensions: 3167838 Number of successful extensions: 12607 Number of sequences better than 10.0: 23 Length of query: 275 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 226 Effective length of database: 52,856,264 Effective search space: 11945515664 Effective search space used: 11945515664 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
