ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf13o21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066474:Os08g0359000 | 221 | 2e-78 | 2 | AK111708:Os01g0515300 | 32 | 0.64 | 3 | AF318582:Os01g0239000 | 28 | 9.2 | 4 | AK121019:Os01g0239000 | 28 | 9.2 | 5 | AK107033:Os01g0632700 | 28 | 9.2 | 6 | AK103861:Os05g0207700 | 28 | 9.2 | 7 | AK102919:Os04g0418800 | 28 | 9.2 | 8 | AK102665:Os05g0207700 | 28 | 9.2 | 9 | AK070692:Os01g0632700 | 28 | 9.2 |
|---|
>AK066474:Os08g0359000 | Length = 271 Score = 221 bits (562), Expect(3) = 2e-78 Identities = 110/137 (80%), Positives = 114/137 (83%) Frame = +2 Query: 263 KAVIPDDEFTLAKXXXXXXXXXXXXXXXXXXXXAYFNLLPGSEWSALMLTYGFPLTIIGM 442 KAV+PD+EFTLAK AYFNLLPGSEWSALMLTYGFPLTIIGM Sbjct: 75 KAVVPDEEFTLAKVSFGVIGLGVGGTLLSYGFGAYFNLLPGSEWSALMLTYGFPLTIIGM 134 Query: 443 ALKYAELKPVPCITYSDAFALREKCATPILKQVRSDVTRYRYGDEQHLDEALKRIFQYGL 622 ALKYAELKPVPC TY+DAFALREKCATPIL QVRSDVTRYRYGDEQHLDEALKRIFQYGL Sbjct: 135 ALKYAELKPVPCTTYADAFALREKCATPILNQVRSDVTRYRYGDEQHLDEALKRIFQYGL 194 Query: 623 GGGIPRRSAPILQKIQE 673 GGGIPRRSAPILQ I+E Sbjct: 195 GGGIPRRSAPILQNIRE 211 Score = 65.5 bits (158), Expect(3) = 2e-78 Identities = 30/33 (90%), Positives = 33/33 (100%) Frame = +3 Query: 798 EAKFTSFFGPGIEAKIGKGGDDLYEVRLISETT 896 +AKFTSFFGPGI+A+IGKGGDDLYEVRLISETT Sbjct: 239 QAKFTSFFGPGIKAEIGKGGDDLYEVRLISETT 271 Score = 46.6 bits (109), Expect(3) = 2e-78 Identities = 22/27 (81%), Positives = 24/27 (88%) Frame = +1 Query: 724 VTDDGKYCLVLEFEAKSLGLSDFEKRQ 804 VTDDGKY LVL FEAK+L +SDFEKRQ Sbjct: 213 VTDDGKYSLVLVFEAKALEISDFEKRQ 239
>AK111708:Os01g0515300 | Length = 559 Score = 32.3 bits (72), Expect = 0.64 Identities = 24/73 (32%), Positives = 31/73 (42%) Frame = +2 Query: 386 SEWSALMLTYGFPLTIIGMALKYAELKPVPCITYSDAFALREKCATPILKQVRSDVTRYR 565 S WSAL TYG+ I L Y L C YS + E ++S +T + Sbjct: 450 SNWSALAGTYGY----IAPELSYTSLVTEKCDVYSFGVVVLEVLMGKHPGDIQSSITTSK 505 Query: 566 YGDEQHLDEALKR 604 Y D LDE L + Sbjct: 506 YDD--FLDEILDK 516
>AF318582:Os01g0239000 | Length = 417 Score = 28.5 bits (62), Expect = 9.2 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 145 AAGGGWRRERSKSPE*VCSALQRHVSLPPPHVAA 44 AAGGG R++ + + V + + PPPH AA Sbjct: 178 AAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAA 211
>AK121019:Os01g0239000 | Length = 539 Score = 28.5 bits (62), Expect = 9.2 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 145 AAGGGWRRERSKSPE*VCSALQRHVSLPPPHVAA 44 AAGGG R++ + + V + + PPPH AA Sbjct: 300 AAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAA 333
>AK107033:Os01g0632700 | Length = 186 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 360 PNPYDKREPPIPSPITPKDTLARVNSSSG 274 P+P D R PP P+P + + ++ +S+SG Sbjct: 73 PSPVDPRPPPQPTPSSAQTPISVASSTSG 101
>AK103861:Os05g0207700 | Length = 424 Score = 28.5 bits (62), Expect = 9.2 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -1 Query: 916 KRCHSSSVVSEIRRTSYRSSPPFPILASIPGPKKEVNFASSQNLIAPTIWLQIPVLNSIS 737 +R HS + RR+S S PP P +P P N APT+ + P NS S Sbjct: 49 RRLHSLDLPKHHRRSSSSSPPPMP--PPLPPPPPSAN--------APTLGKESPSSNSAS 98
>AK102919:Os04g0418800 | Length = 360 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -2 Query: 360 PNPYDKREPPIPSPITPKDT 301 P PY + P PSP TPK T Sbjct: 312 PTPYKPQPKPTPSPYTPKPT 331
>AK102665:Os05g0207700 | Length = 424 Score = 28.5 bits (62), Expect = 9.2 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -1 Query: 916 KRCHSSSVVSEIRRTSYRSSPPFPILASIPGPKKEVNFASSQNLIAPTIWLQIPVLNSIS 737 +R HS + RR+S S PP P +P P N APT+ + P NS S Sbjct: 49 RRLHSLDLPKHHRRSSSSSPPPMP--PPLPPPPPSAN--------APTLGKESPSSNSAS 98
>AK070692:Os01g0632700 | Length = 147 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 360 PNPYDKREPPIPSPITPKDTLARVNSSSG 274 P+P D R PP P+P + + ++ +S+SG Sbjct: 33 PSPVDPRPPPQPTPSSAQTPISVASSTSG 61 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,839,407 Number of extensions: 741477 Number of successful extensions: 2701 Number of sequences better than 10.0: 9 Number of HSP's gapped: 2696 Number of HSP's successfully gapped: 11 Length of query: 378 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 276 Effective length of database: 11,315,673 Effective search space: 3123125748 Effective search space used: 3123125748 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
