ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf13o21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q96SU4:OSBL9_HUMAN Oxysterol-binding protein-related protein 9 -... 34 1.3
2P45331:METE_HAEIN 5-methyltetrahydropteroyltriglutamate--homocys... 33 2.2
3Q58D65:TYW2_BOVIN tRNA wybutosine-synthesizing protein 2 homolog... 32 4.8

>Q96SU4:OSBL9_HUMAN Oxysterol-binding protein-related protein 9 - Homo sapiens (Human)|
          Length = 736
 Score = 33.9 bits (76), Expect = 1.3
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
 Frame = -1

Query: 949 LLNISSRESGRKRCHSSSVVSEIRRTS--YRSSPPFPILASIPG----PKKEVNFASSQN 788
           LL I+  +S  ++ H+  ++S I      Y+ SP  P+++++P     P + V    S+ 
Sbjct: 176 LLQIAKDQSNAEK-HADGMISTINPVDAIYQPSPLEPVISTMPSQTVLPPEPVQLCKSEQ 234

Query: 787 LIAPTIWLQIPVLNSISHHQLPSAEKT 707
              P+     PVL ++ HHQ P+   T
Sbjct: 235 --RPSSLPVGPVLATLGHHQTPTPNST 259



to top

>P45331:METE_HAEIN 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase|
            - Haemophilus influenzae
          Length = 756

 Score = 33.1 bits (74), Expect = 2.2
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
 Frame = -1

Query: 1063 HTMLDLELHTKLRSKIKYIFLQ*QEIICKLERKGNKDHLLNISSRESGRKRCHSSSVVSE 884
            HT  DLE+  +L+ K   ++      + K+E        LN + R S +    +S V ++
Sbjct: 322  HTPFDLEVEVQLKEKNTALYSWLSFTLQKVEELNVLKQALN-NGRASVQAALDASQVAAD 380

Query: 883  IRRTSYRSSPPFPI--LASIPGPKKEVNFASSQNLIAPTIWLQIPVLNSISHHQLP 722
             R TS     P     LA++P    +     ++ ++    WL +P+L + +    P
Sbjct: 381  ARATSKEIHRPEVAERLANLPKGADQRKSPFAERIVKQNAWLNLPLLPTTNIGSFP 436



to top

>Q58D65:TYW2_BOVIN tRNA wybutosine-synthesizing protein 2 homolog - Bos taurus|
           (Bovine)
          Length = 438

 Score = 32.0 bits (71), Expect = 4.8
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +1

Query: 4   EDKLSRLIYTLVAVP-RRAAEGERHVSAVHCKLTPGSCCAPGAILLPPPGEKCFPYA 171
           + ++ +L    VA+P  R A  E+H+  +  ++ PGS C P  +L P P +K   Y+
Sbjct: 37  QHRVKKLRDGTVALPVLREALLEQHLRELRNRVAPGSTCVPTQLLDPVPSKKAQSYS 93


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 191,086,972
Number of extensions: 4148484
Number of successful extensions: 12592
Number of sequences better than 10.0: 3
Number of HSP's gapped: 12581
Number of HSP's successfully gapped: 3
Length of query: 378
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 263
Effective length of database: 69,142,514
Effective search space: 18184481182
Effective search space used: 18184481182
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top