| Clone Name | FLbaf13o12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK067831:Os08g0538600 | 674 | 0.0 | 2 | Os04g0419500:Os04g0419500 | 31 | 2.3 | 3 | AK064702: | 31 | 2.9 | 4 | AK100757:Os04g0555000 | 31 | 2.9 | 5 | AK072188:Os09g0537100 | 29 | 8.6 |
|---|
>AK067831:Os08g0538600 | Length = 424 Score = 674 bits (1739), Expect = 0.0 Identities = 309/406 (76%), Positives = 352/406 (86%), Gaps = 1/406 (0%) Frame = +3 Query: 159 PLTSEALNVRGHLLKSKTFRSPPILLGPGSVSNKYYHDVDFPRGHLAVKSFDAEVVDENG 338 PL EALNVRGHLLKSKTF SP L PGSVSNK+Y+DV FPRGHLA+KSF+AEVVDENG Sbjct: 19 PLPLEALNVRGHLLKSKTFLSPAFFLHPGSVSNKFYYDVPFPRGHLALKSFNAEVVDENG 78 Query: 339 VPVPLHETYLHHWVAVPYYALKKSQSSDAQKVP-AMIKGNDGVCKRSLTQYFGLGSETRH 515 VPVPLH+TYLHHWV PYYALK S S+DAQK+P +I N GVCK++L QY+GLGSETRH Sbjct: 79 VPVPLHDTYLHHWVVEPYYALKNSDSADAQKLPKGIIARNSGVCKKTLGQYYGLGSETRH 138 Query: 516 TATWVPDPYGIETGNQEKAPEGYEEKWLLNIHAIDTRGVVDKPSCTECKCDSYNVTIDEY 695 TATWVPDPYGIE GN EK PEGYEEKWL+N+HAIDTRG +DK CTECKCD YN+TIDEY Sbjct: 139 TATWVPDPYGIEIGNPEKPPEGYEEKWLINVHAIDTRGAIDKLGCTECKCDLYNMTIDEY 198 Query: 696 GRTVSKNYTGGLLCCYDQTQCQLKEGFNGEVRTVFLQYTVTWLDWTDAVVPVKIYIFDVT 875 GR + K+Y GGL CCYD+TQC++KEGFNGE+R +FL+YTVTWLDW+DAVVPVKIYIFDVT Sbjct: 199 GRKLPKDYIGGLYCCYDETQCKVKEGFNGELRKLFLRYTVTWLDWSDAVVPVKIYIFDVT 258 Query: 876 DTAMLDGIHERSCKVEYQVEECSTENRANNECIHTKTTRAVLPRGGDIVYSVAHQHSGGV 1055 DT+ D +CKVEYQVEECS ENRA NECI K T+ V+P GGDIV+ VAHQHSGG+ Sbjct: 259 DTSPPDEKSGTACKVEYQVEECSPENRAKNECIDVKVTKEVIPCGGDIVFGVAHQHSGGI 318 Query: 1056 GASLHGQDGRLLCESLPTYGTGKEAGNEANYIVGMSSCYPKPGSIKVSDGEVLTIVSNYS 1235 GASLHGQDGRLLC S+P+YG G+EAGNE NYIVGMS+CYPKPGS+KVSDGEVLT+VSNYS Sbjct: 319 GASLHGQDGRLLCASIPSYGKGEEAGNEDNYIVGMSTCYPKPGSVKVSDGEVLTVVSNYS 378 Query: 1236 STREHTGVMGLVYILVAEPQQPAPAPSLCFSFPAPWCLPAWMSGNM 1373 S R+HTGVMGL+YILVAE +QPAP P+LCFSFP PWCLP W++ N+ Sbjct: 379 SDRQHTGVMGLLYILVAEQEQPAPKPALCFSFPVPWCLPTWLTSNL 424
>Os04g0419500:Os04g0419500 | Length = 431 Score = 31.2 bits (69), Expect = 2.3 Identities = 18/67 (26%), Positives = 29/67 (43%) Frame = +1 Query: 832 LTRWCLSRSTYLTLRIPPCWMEFMNALARLSIKSRNAARKTEPTTSASILRPLERSCRVE 1011 + RW L+RST P C A + S S + + EP + +L PL Sbjct: 265 IDRWLLARST-----CPTCRQSLFGAPQKASGCSESEGSQAEPAPARPVLAPLRPEGVTA 319 Query: 1012 EISCTVL 1032 +++CT + Sbjct: 320 KLACTAV 326
>AK064702: | Length = 158 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 3/31 (9%) Frame = -2 Query: 1120 PVP*VGSDSHRRRPSWPCREA---PTPPECW 1037 P P S S RRR SW CR P PP W Sbjct: 111 PPPPPPSSSRRRRRSWRCRRVLPPPPPPRSW 141
>AK100757:Os04g0555000 | Length = 711 Score = 30.8 bits (68), Expect = 2.9 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 1242 REHTGVMGLVYILVAEPQQPAPAPSLCFSFP 1334 + H V +++L +PQ P PAP+ C FP Sbjct: 287 KRHHSVPDNLFLLHNQPQPPPPAPAQCLPFP 317
>AK072188:Os09g0537100 | Length = 117 Score = 29.3 bits (64), Expect = 8.6 Identities = 24/73 (32%), Positives = 35/73 (47%) Frame = -3 Query: 840 PRQSSRAKSRCTARTPSAPRH*TLP*ADTGSDHSSKATHQCSSSRLCAHTHRL*RCKSRT 661 P +S TA TP AP T+P + + +S +T + S+ L HRL C++ T Sbjct: 49 PASTSPTARSSTAPTPQAP---TVPLPASSTLSTSPSTAR--SAPLLPRLHRLSSCRTST 103 Query: 660 CTRCS*ACRPRPS 622 TR P+PS Sbjct: 104 MTRLR-LSTPKPS 115 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 47,164,557 Number of extensions: 1143634 Number of successful extensions: 3362 Number of sequences better than 10.0: 5 Number of HSP's gapped: 3358 Number of HSP's successfully gapped: 5 Length of query: 550 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 444 Effective length of database: 11,155,509 Effective search space: 4953045996 Effective search space used: 4953045996 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)