| Clone Name | FLbaf17a16 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT834458.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124C22, full insert sequence Length = 1361 Score = 387 bits (195), Expect = e-104 Identities = 472/565 (83%), Gaps = 12/565 (2%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 ||||||||||||||| | || || || ||||||||||||||||||||||||||||| ||| Sbjct: 443 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 502 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| ||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 503 gatgggcactgggcccgtgactgcaaagctggagactggaaaaacagatgctatcgttgt 562 Query: 492 ggagatagtggccatatagaaagggattgtcagaacagccctaagaacctcaagcgtgga 551 ||||| || ||||||||||||||||| || | ||||||||||||||| |||||||||||| Sbjct: 563 ggagacaggggccatatagaaagggactgccggaacagccctaagaatctcaagcgtgga 622 Query: 552 aagagttactccagatctccatctcctcgccgcggaagggtgcgcgataggagctacagc 611 | || ||||| ||||| ||||| ||||| || || ||| || | ||||||||||||| Sbjct: 623 agaagctactcaagatccccatcccctcgtcgtgggaggagccgtggtaggagctacagc 682 Query: 612 aggagtcgcagtaggagctacagccgctctgtttccccaaggaggga---------tgaa 662 ||||| || || ||||||||||||||||| || ||||||||||| |||| Sbjct: 683 aggagccgtagcaggagctacagccgctcccagtctccaaggagggatagccgtaatgaa 742 Query: 663 aggcgctcaaggagcccccgtgacagtcgcagcccaaggaggagcccccgtgacagtcgc 722 ||| | ||||||||||| ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 743 aggagatcaaggagccctcgtgacagtcggagccctaggggaagcccccgtgacagtcgc 802 Query: 723 agccctaggaggagcccccgagacagtcgcagccctatgaagagcccccgtggcagtcgc 782 ||||||||| |||||||||| |||||||||||||||| | |||||| || | || | Sbjct: 803 agccctagggggagcccccgtgacagtcgcagccctaaggggagccctcgcgacacccag 862 Query: 783 agccctatgaggagcccccgtgacagccgcagccctaggaggagtgcttcacctgccaag 842 ||||||| | | ||||| ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 863 agccctaggggaagccctcgtgatagccgcagccctaggagaagtgcttcaccacccaac 922 Query: 843 gggagggcccggagccccacccctcctggcagcagaagccctgcaccaagggagaacagc 902 |||||| ||| ||||| |||||| || |||||| || ||||||||||||| ||||| Sbjct: 923 gggaggaaccgcagccctacccctaatgccagcaggagtcctgcaccaaggg---acagc 979 Query: 903 aggagtccgatgaaggctgacagcc 927 ||||| || |||| |||||||||| Sbjct: 980 aggagcccaatgagagctgacagcc 1004 Score = 319 bits (161), Expect = 1e-83 Identities = 221/241 (91%) Strand = Plus / Plus Query: 90 cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 149 ||||||||||||| || ||||||||||| ||||||||| ||||||||||||| || || Sbjct: 191 cgttacggcggcagcacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 250 Query: 150 gaccttgaagacctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgag 209 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 251 gaccttgaagaccttttcggcagatatgggagagtgcgatatgtggatatgaagcacgag 310 Query: 210 tttgcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgat 269 |||||||||||||| ||||||||| | ||||||||||||| |||||||||||||| ||| Sbjct: 311 tttgcatttgttgaatttagtgatgctcgggatgctgatgaggcaaggtacaacctggat 370 Query: 270 ggtcgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtggc 329 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 371 ggtcgggactttgatggaagccgcatgattgttgagtttgctaaaggggttccacgtggc 430 Query: 330 c 330 | Sbjct: 431 c 431 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Plus Query: 66 atgcctcgctatgatgagcgtgatcgttacg 96 ||||||||||||||||| |||||||| |||| Sbjct: 155 atgcctcgctatgatgaccgtgatcgctacg 185 Score = 46.1 bits (23), Expect = 0.30 Identities = 56/67 (83%) Strand = Plus / Plus Query: 934 acatgagcccagctgcaaatggtcgtagcccgagccccagggacggcgaagacaatggca 993 ||||||| ||||||| ||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 1032 acatgagtacagctgccaatggccggagcccaagccccagggattatgaagacaatggca 1091 Query: 994 accatcg 1000 | ||||| Sbjct: 1092 atcatcg 1098
>ref|NM_001048601.1| Oryza sativa (japonica cultivar-group) Os01g0155600 (Os01g0155600) mRNA, complete cds Length = 1376 Score = 379 bits (191), Expect = e-101 Identities = 471/565 (83%), Gaps = 12/565 (2%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 ||||||||||||||| | || || || ||||||||||||||||||||||||||||| ||| Sbjct: 456 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 515 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| ||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 516 gatgggcactgggcccgtgactgcaaagctggagactggaaaaacagatgctatcggtgt 575 Query: 492 ggagatagtggccatatagaaagggattgtcagaacagccctaagaacctcaagcgtgga 551 ||||| || ||||||||||||||||| || | ||||||||||||||| |||||||||||| Sbjct: 576 ggagacaggggccatatagaaagggactgccggaacagccctaagaatctcaagcgtgga 635 Query: 552 aagagttactccagatctccatctcctcgccgcggaagggtgcgcgataggagctacagc 611 | || ||||| ||||| ||||| ||||| || || ||| || | ||||||||||||| Sbjct: 636 agaagctactcaagatccccatcccctcgtcgtgggaggagccgtggtaggagctacagc 695 Query: 612 aggagtcgcagtaggagctacagccgctctgtttccccaaggaggga---------tgaa 662 ||||| || || ||||||||||||||||| || ||||||||||| |||| Sbjct: 696 aggagccgtagcaggagctacagccgctcccagtctccaaggagggatagccgtaatgaa 755 Query: 663 aggcgctcaaggagcccccgtgacagtcgcagcccaaggaggagcccccgtgacagtcgc 722 ||| | ||||||||||| ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 756 aggagatcaaggagccctcgtgacagtcggagccctaggggaagcccccgtgacagtcgc 815 Query: 723 agccctaggaggagcccccgagacagtcgcagccctatgaagagcccccgtggcagtcgc 782 ||||||||| |||||||||| |||||||||||||||| | |||||| || | || | Sbjct: 816 agccctagggggagcccccgtgacagtcgcagccctaaggggagccctcgcgacacccag 875 Query: 783 agccctatgaggagcccccgtgacagccgcagccctaggaggagtgcttcacctgccaag 842 ||||||| | | ||||| ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 876 agccctaggggaagccctcgtgatagccgcagccctaggagaagtgcttcaccacccaac 935 Query: 843 gggagggcccggagccccacccctcctggcagcagaagccctgcaccaagggagaacagc 902 |||||| ||| ||||| |||||| || |||||| || ||||||||||||| ||||| Sbjct: 936 gggaggaaccgcagccctacccctaatgccagcaggagtcctgcaccaaggg---acagc 992 Query: 903 aggagtccgatgaaggctgacagcc 927 ||||| || |||| |||||||||| Sbjct: 993 aggagcccaatgagagctgacagcc 1017 Score = 327 bits (165), Expect = 6e-86 Identities = 222/241 (92%) Strand = Plus / Plus Query: 90 cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 149 |||||||||||||| || ||||||||||| ||||||||| ||||||||||||| || || Sbjct: 204 cgttacggcggcaacacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 263 Query: 150 gaccttgaagacctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgag 209 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 264 gaccttgaagaccttttcggcagatatgggagagtgcgatatgtggatatgaagcacgag 323 Query: 210 tttgcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgat 269 |||||||||||||| ||||||||| | ||||||||||||| |||||||||||||| ||| Sbjct: 324 tttgcatttgttgaatttagtgatgctcgggatgctgatgaggcaaggtacaacctggat 383 Query: 270 ggtcgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtggc 329 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 384 ggtcgggactttgatggaagccgcatgattgttgagtttgctaaaggggttccacgtggc 443 Query: 330 c 330 | Sbjct: 444 c 444 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Plus Query: 66 atgcctcgctatgatgagcgtgatcgttacg 96 ||||||||||||||||| |||||||| |||| Sbjct: 168 atgcctcgctatgatgaccgtgatcgctacg 198 Score = 46.1 bits (23), Expect = 0.30 Identities = 56/67 (83%) Strand = Plus / Plus Query: 934 acatgagcccagctgcaaatggtcgtagcccgagccccagggacggcgaagacaatggca 993 ||||||| ||||||| ||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 1045 acatgagtacagctgccaatggccggagcccaagccccagggattatgaagacaatggca 1104 Query: 994 accatcg 1000 | ||||| Sbjct: 1105 atcatcg 1111
>dbj|AK060171.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F07, full insert sequence Length = 1332 Score = 379 bits (191), Expect = e-101 Identities = 471/565 (83%), Gaps = 12/565 (2%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 ||||||||||||||| | || || || ||||||||||||||||||||||||||||| ||| Sbjct: 412 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 471 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| ||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 472 gatgggcactgggcccgtgactgcaaagctggagactggaaaaacagatgctatcggtgt 531 Query: 492 ggagatagtggccatatagaaagggattgtcagaacagccctaagaacctcaagcgtgga 551 ||||| || ||||||||||||||||| || | ||||||||||||||| |||||||||||| Sbjct: 532 ggagacaggggccatatagaaagggactgccggaacagccctaagaatctcaagcgtgga 591 Query: 552 aagagttactccagatctccatctcctcgccgcggaagggtgcgcgataggagctacagc 611 | || ||||| ||||| ||||| ||||| || || ||| || | ||||||||||||| Sbjct: 592 agaagctactcaagatccccatcccctcgtcgtgggaggagccgtggtaggagctacagc 651 Query: 612 aggagtcgcagtaggagctacagccgctctgtttccccaaggaggga---------tgaa 662 ||||| || || ||||||||||||||||| || ||||||||||| |||| Sbjct: 652 aggagccgtagcaggagctacagccgctcccagtctccaaggagggatagccgtaatgaa 711 Query: 663 aggcgctcaaggagcccccgtgacagtcgcagcccaaggaggagcccccgtgacagtcgc 722 ||| | ||||||||||| ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 712 aggagatcaaggagccctcgtgacagtcggagccctaggggaagcccccgtgacagtcgc 771 Query: 723 agccctaggaggagcccccgagacagtcgcagccctatgaagagcccccgtggcagtcgc 782 ||||||||| |||||||||| |||||||||||||||| | |||||| || | || | Sbjct: 772 agccctagggggagcccccgtgacagtcgcagccctaaggggagccctcgcgacacccag 831 Query: 783 agccctatgaggagcccccgtgacagccgcagccctaggaggagtgcttcacctgccaag 842 ||||||| | | ||||| ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 832 agccctaggggaagccctcgtgatagccgcagccctaggagaagtgcttcaccacccaac 891 Query: 843 gggagggcccggagccccacccctcctggcagcagaagccctgcaccaagggagaacagc 902 |||||| ||| ||||| |||||| || |||||| || ||||||||||||| ||||| Sbjct: 892 gggaggaaccgcagccctacccctaatgccagcaggagtcctgcaccaaggg---acagc 948 Query: 903 aggagtccgatgaaggctgacagcc 927 ||||| || |||| |||||||||| Sbjct: 949 aggagcccaatgagagctgacagcc 973 Score = 327 bits (165), Expect = 6e-86 Identities = 222/241 (92%) Strand = Plus / Plus Query: 90 cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 149 |||||||||||||| || ||||||||||| ||||||||| ||||||||||||| || || Sbjct: 160 cgttacggcggcaacacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 219 Query: 150 gaccttgaagacctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgag 209 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 220 gaccttgaagaccttttcggcagatatgggagagtgcgatatgtggatatgaagcacgag 279 Query: 210 tttgcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgat 269 |||||||||||||| ||||||||| | ||||||||||||| |||||||||||||| ||| Sbjct: 280 tttgcatttgttgaatttagtgatgctcgggatgctgatgaggcaaggtacaacctggat 339 Query: 270 ggtcgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtggc 329 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 340 ggtcgggactttgatggaagccgcatgattgttgagtttgctaaaggggttccacgtggc 399 Query: 330 c 330 | Sbjct: 400 c 400 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Plus Query: 66 atgcctcgctatgatgagcgtgatcgttacg 96 ||||||||||||||||| |||||||| |||| Sbjct: 124 atgcctcgctatgatgaccgtgatcgctacg 154 Score = 46.1 bits (23), Expect = 0.30 Identities = 56/67 (83%) Strand = Plus / Plus Query: 934 acatgagcccagctgcaaatggtcgtagcccgagccccagggacggcgaagacaatggca 993 ||||||| ||||||| ||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 1001 acatgagtacagctgccaatggccggagcccaagccccagggattatgaagacaatggca 1060 Query: 994 accatcg 1000 | ||||| Sbjct: 1061 atcatcg 1067
>dbj|AK071635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100L15, full insert sequence Length = 1377 Score = 363 bits (183), Expect = 1e-96 Identities = 469/565 (83%), Gaps = 12/565 (2%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 ||||||||||||||| | || || || ||||||||||||||||||||||||||||| ||| Sbjct: 457 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 516 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| ||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 517 gatgggcactgggcccgtgactgcaaagctggagactggaaaaacagatgctatcggtgt 576 Query: 492 ggagatagtggccatatagaaagggattgtcagaacagccctaagaacctcaagcgtgga 551 ||||| || ||||||||||| ||||| || | ||||||||||||||| |||||||||||| Sbjct: 577 ggagacaggggccatatagagagggactgccggaacagccctaagaatctcaagcgtgga 636 Query: 552 aagagttactccagatctccatctcctcgccgcggaagggtgcgcgataggagctacagc 611 | || | ||| ||||| ||||| ||||| || || ||| || | ||||||||||||| Sbjct: 637 agaagctgctcaagatccccatcccctcgtcgtgggaggagccgtggtaggagctacagc 696 Query: 612 aggagtcgcagtaggagctacagccgctctgtttccccaaggaggga---------tgaa 662 ||||| || || ||||||||||||||||| || ||||||||||| |||| Sbjct: 697 aggagccgtagcaggagctacagccgctcccagtctccaaggagggatagccgtaatgaa 756 Query: 663 aggcgctcaaggagcccccgtgacagtcgcagcccaaggaggagcccccgtgacagtcgc 722 ||| | ||||||||||| ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 757 aggagatcaaggagccctcgtgacagtcggagccctaggggaagcccccgtgacagtcgc 816 Query: 723 agccctaggaggagcccccgagacagtcgcagccctatgaagagcccccgtggcagtcgc 782 ||||||||| |||||||||| |||||||||||||||| | |||||| || | || | Sbjct: 817 agccctagggggagcccccgtgacagtcgcagccctaaggggagccctcgcgacacccag 876 Query: 783 agccctatgaggagcccccgtgacagccgcagccctaggaggagtgcttcacctgccaag 842 ||||||| | | ||||| ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 877 agccctaggggaagccctcgtgatagccgcagccctaggagaagtgcttcaccacccaac 936 Query: 843 gggagggcccggagccccacccctcctggcagcagaagccctgcaccaagggagaacagc 902 |||||| ||| ||||| |||||| || |||||| || ||||||||||||| ||||| Sbjct: 937 gggaggaaccgcagccctacccctaatgccagcaggagtcctgcaccaaggg---acagc 993 Query: 903 aggagtccgatgaaggctgacagcc 927 ||||| || |||| |||||||||| Sbjct: 994 aggagcccaatgagagctgacagcc 1018 Score = 327 bits (165), Expect = 6e-86 Identities = 222/241 (92%) Strand = Plus / Plus Query: 90 cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 149 |||||||||||||| || ||||||||||| ||||||||| ||||||||||||| || || Sbjct: 205 cgttacggcggcaacacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 264 Query: 150 gaccttgaagacctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgag 209 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 265 gaccttgaagaccttttcggcagatatgggagagtgcgatatgtggatatgaagcacgag 324 Query: 210 tttgcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgat 269 |||||||||||||| ||||||||| | ||||||||||||| |||||||||||||| ||| Sbjct: 325 tttgcatttgttgaatttagtgatgctcgggatgctgatgaggcaaggtacaacctggat 384 Query: 270 ggtcgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtggc 329 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 385 ggtcgggactttgatggaagccgcatgattgttgagtttgctaaaggggttccacgtggc 444 Query: 330 c 330 | Sbjct: 445 c 445 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Plus Query: 66 atgcctcgctatgatgagcgtgatcgttacg 96 ||||||||||||||||| |||||||| |||| Sbjct: 169 atgcctcgctatgatgaccgtgatcgctacg 199 Score = 46.1 bits (23), Expect = 0.30 Identities = 56/67 (83%) Strand = Plus / Plus Query: 934 acatgagcccagctgcaaatggtcgtagcccgagccccagggacggcgaagacaatggca 993 ||||||| ||||||| ||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 1046 acatgagtacagctgccaatggccggagcccaagccccagggattatgaagacaatggca 1105 Query: 994 accatcg 1000 | ||||| Sbjct: 1106 atcatcg 1112
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 194 bits (98), Expect = 5e-46 Identities = 155/174 (89%) Strand = Plus / Minus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 ||||||||||||||| | || || || ||||||||||||||||||||||||||||| ||| Sbjct: 2986644 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 2986585 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| ||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 2986584 gatgggcactgggcccgtgactgcaaagctggagactggaaaaacagatgctatcggtgt 2986525 Query: 492 ggagatagtggccatatagaaagggattgtcagaacagccctaagaacctcaag 545 ||||| || ||||||||||||||||| || | ||||||||||||||| |||||| Sbjct: 2986524 ggagacaggggccatatagaaagggactgccggaacagccctaagaatctcaag 2986471 Score = 182 bits (92), Expect = 2e-42 Identities = 226/270 (83%), Gaps = 3/270 (1%) Strand = Plus / Minus Query: 658 atgaaaggcgctcaaggagcccccgtgacagtcgcagcccaaggaggagcccccgtgaca 717 |||||||| | ||||||||||| ||||||||||| ||||| ||| | ||||||||||||| Sbjct: 2985954 atgaaaggagatcaaggagccctcgtgacagtcggagccctaggggaagcccccgtgaca 2985895 Query: 718 gtcgcagccctaggaggagcccccgagacagtcgcagccctatgaagagcccccgtggca 777 |||||||||||||| |||||||||| |||||||||||||||| | |||||| || | || Sbjct: 2985894 gtcgcagccctagggggagcccccgtgacagtcgcagccctaaggggagccctcgcgaca 2985835 Query: 778 gtcgcagccctatgaggagcccccgtgacagccgcagccctaggaggagtgcttcacctg 837 | ||||||| | | ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 2985834 cccagagccctaggggaagccctcgtgatagccgcagccctaggagaagtgcttcaccac 2985775 Query: 838 ccaaggggagggcccggagccccacccctcctggcagcagaagccctgcaccaagggaga 897 |||| |||||| ||| ||||| |||||| || |||||| || ||||||||||||| Sbjct: 2985774 ccaacgggaggaaccgcagccctacccctaatgccagcaggagtcctgcaccaaggg--- 2985718 Query: 898 acagcaggagtccgatgaaggctgacagcc 927 |||||||||| || |||| |||||||||| Sbjct: 2985717 acagcaggagcccaatgagagctgacagcc 2985688 Score = 133 bits (67), Expect = 2e-27 Identities = 88/95 (92%) Strand = Plus / Minus Query: 225 tttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgat 284 ||||||||| | ||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 2986890 tttagtgatgctcgggatgctgatgaggcaaggtacaacctggatggtcgggactttgat 2986831 Query: 285 ggaagccgcatgattgtcgagtttgctaaaggggt 319 ||||||||||||||||| ||||||||||||||||| Sbjct: 2986830 ggaagccgcatgattgttgagtttgctaaaggggt 2986796 Score = 119 bits (60), Expect = 3e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 90 cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 149 |||||||||||||| || ||||||||||| ||||||||| ||||||||||||| || || Sbjct: 2987851 cgttacggcggcaacacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 2987792 Query: 150 gaccttgaagacctcttcggcagatatgggag 181 |||||||||||||| ||||||||||||||||| Sbjct: 2987791 gaccttgaagaccttttcggcagatatgggag 2987760 Score = 69.9 bits (35), Expect = 2e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 180 agagtgcgacatgtggatatgaagcatgagtttgcatttgttg 222 ||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 2987044 agagtgcgatatgtggatatgaagcacgagtttgcatttgttg 2987002 Score = 48.1 bits (24), Expect = 0.077 Identities = 33/36 (91%) Strand = Plus / Minus Query: 599 taggagctacagcaggagtcgcagtaggagctacag 634 |||||||||||||||||| || || ||||||||||| Sbjct: 2986336 taggagctacagcaggagccgtagcaggagctacag 2986301 Score = 46.1 bits (23), Expect = 0.30 Identities = 56/67 (83%) Strand = Plus / Minus Query: 934 acatgagcccagctgcaaatggtcgtagcccgagccccagggacggcgaagacaatggca 993 ||||||| ||||||| ||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 2985660 acatgagtacagctgccaatggccggagcccaagccccagggattatgaagacaatggca 2985601 Query: 994 accatcg 1000 | ||||| Sbjct: 2985600 atcatcg 2985594 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Minus Query: 66 atgcctcgctatgatgagcgtgatcgttacg 96 ||||||||||||||||| |||||||| |||| Sbjct: 2987887 atgcctcgctatgatgaccgtgatcgctacg 2987857
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 194 bits (98), Expect = 5e-46 Identities = 155/174 (89%) Strand = Plus / Minus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 ||||||||||||||| | || || || ||||||||||||||||||||||||||||| ||| Sbjct: 68161 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 68102 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| ||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 68101 gatgggcactgggcccgtgactgcaaagctggagactggaaaaacagatgctatcggtgt 68042 Query: 492 ggagatagtggccatatagaaagggattgtcagaacagccctaagaacctcaag 545 ||||| || ||||||||||||||||| || | ||||||||||||||| |||||| Sbjct: 68041 ggagacaggggccatatagaaagggactgccggaacagccctaagaatctcaag 67988 Score = 182 bits (92), Expect = 2e-42 Identities = 226/270 (83%), Gaps = 3/270 (1%) Strand = Plus / Minus Query: 658 atgaaaggcgctcaaggagcccccgtgacagtcgcagcccaaggaggagcccccgtgaca 717 |||||||| | ||||||||||| ||||||||||| ||||| ||| | ||||||||||||| Sbjct: 67471 atgaaaggagatcaaggagccctcgtgacagtcggagccctaggggaagcccccgtgaca 67412 Query: 718 gtcgcagccctaggaggagcccccgagacagtcgcagccctatgaagagcccccgtggca 777 |||||||||||||| |||||||||| |||||||||||||||| | |||||| || | || Sbjct: 67411 gtcgcagccctagggggagcccccgtgacagtcgcagccctaaggggagccctcgcgaca 67352 Query: 778 gtcgcagccctatgaggagcccccgtgacagccgcagccctaggaggagtgcttcacctg 837 | ||||||| | | ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 67351 cccagagccctaggggaagccctcgtgatagccgcagccctaggagaagtgcttcaccac 67292 Query: 838 ccaaggggagggcccggagccccacccctcctggcagcagaagccctgcaccaagggaga 897 |||| |||||| ||| ||||| |||||| || |||||| || ||||||||||||| Sbjct: 67291 ccaacgggaggaaccgcagccctacccctaatgccagcaggagtcctgcaccaaggg--- 67235 Query: 898 acagcaggagtccgatgaaggctgacagcc 927 |||||||||| || |||| |||||||||| Sbjct: 67234 acagcaggagcccaatgagagctgacagcc 67205 Score = 133 bits (67), Expect = 2e-27 Identities = 88/95 (92%) Strand = Plus / Minus Query: 225 tttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgat 284 ||||||||| | ||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 68407 tttagtgatgctcgggatgctgatgaggcaaggtacaacctggatggtcgggactttgat 68348 Query: 285 ggaagccgcatgattgtcgagtttgctaaaggggt 319 ||||||||||||||||| ||||||||||||||||| Sbjct: 68347 ggaagccgcatgattgttgagtttgctaaaggggt 68313 Score = 119 bits (60), Expect = 3e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 90 cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 149 |||||||||||||| || ||||||||||| ||||||||| ||||||||||||| || || Sbjct: 69368 cgttacggcggcaacacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 69309 Query: 150 gaccttgaagacctcttcggcagatatgggag 181 |||||||||||||| ||||||||||||||||| Sbjct: 69308 gaccttgaagaccttttcggcagatatgggag 69277 Score = 69.9 bits (35), Expect = 2e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 180 agagtgcgacatgtggatatgaagcatgagtttgcatttgttg 222 ||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 68561 agagtgcgatatgtggatatgaagcacgagtttgcatttgttg 68519 Score = 48.1 bits (24), Expect = 0.077 Identities = 33/36 (91%) Strand = Plus / Minus Query: 599 taggagctacagcaggagtcgcagtaggagctacag 634 |||||||||||||||||| || || ||||||||||| Sbjct: 67853 taggagctacagcaggagccgtagcaggagctacag 67818 Score = 46.1 bits (23), Expect = 0.30 Identities = 56/67 (83%) Strand = Plus / Minus Query: 934 acatgagcccagctgcaaatggtcgtagcccgagccccagggacggcgaagacaatggca 993 ||||||| ||||||| ||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 67177 acatgagtacagctgccaatggccggagcccaagccccagggattatgaagacaatggca 67118 Query: 994 accatcg 1000 | ||||| Sbjct: 67117 atcatcg 67111 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Minus Query: 66 atgcctcgctatgatgagcgtgatcgttacg 96 ||||||||||||||||| |||||||| |||| Sbjct: 69404 atgcctcgctatgatgaccgtgatcgctacg 69374
>ref|NM_001061024.1| Oryza sativa (japonica cultivar-group) Os05g0120100 (Os05g0120100) mRNA, complete cds Length = 1304 Score = 119 bits (60), Expect = 3e-23 Identities = 102/116 (87%) Strand = Plus / Plus Query: 213 gcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggt 272 |||||| ||||||| ||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 206 gcatttattgagttcagtgatccccgtgatgctgaggaagcaaggtacaaccttgatggc 265 Query: 273 cgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 | || |||||||||||||||| |||| |||||||||||||||||||| ||||| Sbjct: 266 agggatgttgatggaagccgcattcttgttgagtttgctaaaggggttccacgtgg 321 Score = 58.0 bits (29), Expect = 8e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 |||||||||||||| | || ||||||||||| | || || || ||||||||||| ||| Sbjct: 335 cgtgaatatatggggagaggacctcctcctggaacaggtcggtgttttaactgtgggatt 394 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaa 472 ||||| || ||||| | |||||||| ||||| |||||||| Sbjct: 395 gatggtcactgggcaagagactgcaaggctggtgactggaa 435
>dbj|AK103897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150I04, full insert sequence Length = 1306 Score = 111 bits (56), Expect = 6e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 213 gcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggt 272 |||||| ||||||| ||||||||| | |||||||| ||||||||||||| ||||||||| Sbjct: 208 gcatttattgagttcagtgatccccgtgatgctgaggaagcaaggtacagccttgatggc 267 Query: 273 cgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 | || |||||||||||||||| |||| |||||||||||||||||||| ||||| Sbjct: 268 agggatgttgatggaagccgcattcttgttgagtttgctaaaggggttccacgtgg 323 Score = 58.0 bits (29), Expect = 8e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 |||||||||||||| | || ||||||||||| | || || || ||||||||||| ||| Sbjct: 337 cgtgaatatatggggagaggacctcctcctggaacaggtcggtgttttaactgtgggatt 396 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaa 472 ||||| || ||||| | |||||||| ||||| |||||||| Sbjct: 397 gatggtcactgggcaagagactgcaaggctggtgactggaa 437
>dbj|AK060437.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-D02, full insert sequence Length = 1152 Score = 111 bits (56), Expect = 6e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 213 gcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggt 272 |||||| ||||||| ||||||||| | ||||||| ||||||||||||||||||||||| Sbjct: 103 gcatttattgagttcagtgatccccgtgatgctggggaagcaaggtacaaccttgatggc 162 Query: 273 cgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 | || |||||||||||||||| |||| |||||||||||||||||||| ||||| Sbjct: 163 agggatgttgatggaagccgcattcttgttgagtttgctaaaggggttccacgtgg 218 Score = 58.0 bits (29), Expect = 8e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 |||||||||||||| | || ||||||||||| | || || || ||||||||||| ||| Sbjct: 232 cgtgaatatatggggagaggacctcctcctggaacaggtcggtgttttaactgtgggatt 291 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaa 472 ||||| || ||||| | |||||||| ||||| |||||||| Sbjct: 292 gatggtcactgggcaagagactgcaaggctggtgactggaa 332
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 99.6 bits (50), Expect = 2e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 222 gagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgacttt 281 ||||| ||||||||| | |||||||| ||||||||||||||||||||||| | || || Sbjct: 986919 gagttcagtgatccccgtgatgctgaggaagcaaggtacaaccttgatggcagggatgtt 986860 Query: 282 gatggaagccgcatgattgtcgagtttgctaaaggggt 319 |||||||||||||| |||| ||||||||||||||||| Sbjct: 986859 gatggaagccgcattcttgttgagtttgctaaaggggt 986822 Score = 58.0 bits (29), Expect = 8e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 |||||||||||||| | || ||||||||||| | || || || ||||||||||| ||| Sbjct: 986670 cgtgaatatatggggagaggacctcctcctggaacaggtcggtgttttaactgtgggatt 986611 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaa 472 ||||| || ||||| | |||||||| ||||| |||||||| Sbjct: 986610 gatggtcactgggcaagagactgcaaggctggtgactggaa 986570 Score = 58.0 bits (29), Expect = 8e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 401 tggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagc 460 |||||||| || |||||| |||||||| || || || || ||| ||| |||||| || Sbjct: 3615297 tggttctgaccactgcttcaactgtgggatggaggggcactggcaccgtaactgcactgc 3615238 Query: 461 tggcgactggaaaaataggtgctatcgttgtggagatagtggccatatagaaagggattg 520 ||| ||||||| ||||||||||||| | |||||||| || || |||||| |||||| || Sbjct: 3615237 tggtgactggacaaataggtgctatggctgtggagagaggggtcatatattaagggaatg 3615178 Query: 521 tcagaacagccctaagaacctcaag 545 |||||||||| ||| | |||||| Sbjct: 3615177 caagaacagccccaaggatctcaag 3615153
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 99.6 bits (50), Expect = 2e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 222 gagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgacttt 281 ||||| ||||||||| | |||||||| ||||||||||||||||||||||| | || || Sbjct: 77316 gagttcagtgatccccgtgatgctgaggaagcaaggtacaaccttgatggcagggatgtt 77257 Query: 282 gatggaagccgcatgattgtcgagtttgctaaaggggt 319 |||||||||||||| |||| ||||||||||||||||| Sbjct: 77256 gatggaagccgcattcttgttgagtttgctaaaggggt 77219 Score = 58.0 bits (29), Expect = 8e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 |||||||||||||| | || ||||||||||| | || || || ||||||||||| ||| Sbjct: 77067 cgtgaatatatggggagaggacctcctcctggaacaggtcggtgttttaactgtgggatt 77008 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaa 472 ||||| || ||||| | |||||||| ||||| |||||||| Sbjct: 77007 gatggtcactgggcaagagactgcaaggctggtgactggaa 76967
>gb|AY107198.1| Zea mays PCO093409 mRNA sequence Length = 1566 Score = 85.7 bits (43), Expect = 4e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 150 gaccttgaagacctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgag 209 ||||| ||| |||| ||| ||| |||||||||| | ||| | ||||| |||||| ||| Sbjct: 422 gacctagaataccttttcagcaaatatgggagaattcgagaagtggagttgaagcgtgac 481 Query: 210 tttgcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgat 269 | |||||| |||| || ||||| ||| | ||||||||||| ||| ||||||||| ||| Sbjct: 482 tatgcattcattgaattcagtgacccccgtgatgctgatgatgcacagtacaacctagat 541 Query: 270 ggtcgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 || | ||| | |||||||||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 542 ggcagggacgtcgatggaagccgcattattgttgaatttgctaaaggggttcctcgtgg 600 Score = 60.0 bits (30), Expect = 2e-05 Identities = 114/142 (80%) Strand = Plus / Plus Query: 408 ggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcgac 467 ||||| || ||||||||||| ||||||| || ||||| | ||||| | ||||| ||| Sbjct: 650 ggccgttgttttaactgtggagttgatggtcactgggcaagagactgtcaggctggtgac 709 Query: 468 tggaaaaataggtgctatcgttgtggagatagtggccatatagaaagggattgtcagaac 527 ||||| || | ||||| |||||||| || || |||||||||||||| |||| |||||| Sbjct: 710 tggaagaacaaatgctaccgttgtggcgaaaggggccatatagaaagaaattgccagaac 769 Query: 528 agccctaagaacctcaagcgtg 549 || || | |||||||| ||||| Sbjct: 770 agtccaaggaacctcaggcgtg 791
>dbj|AK073348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025D08, full insert sequence Length = 1306 Score = 81.8 bits (41), Expect = 6e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 228 agtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatgga 287 ||||||||| | ||||||||||||||| |||| ||||| ||||| | || |||||||| Sbjct: 266 agtgatccccgtgatgctgatgaagcacggtataacctagatggcagggatgttgatgga 325 Query: 288 agccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 |||||||| |||| |||||||||||||| ||||| ||||| Sbjct: 326 agccgcattcttgttgagtttgctaaaggagttccacgtgg 366 Score = 61.9 bits (31), Expect = 5e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 |||||||||||||| | || |||||||| || | || ||||| ||||||||||| ||| Sbjct: 383 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 442 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| | |||||||| ||||| |||||||| || | || || |||||| Sbjct: 443 gatggtcactgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgt 502 Query: 492 ggagatagtggccatatagaaag 514 ||||| || || || |||||||| Sbjct: 503 ggagaaagaggtcacatagaaag 525
>gb|DQ019628.1| Triticum aestivum alternative splicing regulator (RSZ38) mRNA, complete cds Length = 1255 Score = 81.8 bits (41), Expect = 6e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 ||||||||| |||| | ||||||||||| || | ||||| || || |||||||| ||| Sbjct: 329 cgtgaatatgtgggaagagggcctcctccaggaacaggccgttgtttcaactgtggtatt 388 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| |||||||| | |||||||||||||| |||||||| || | ||||| || ||| Sbjct: 389 gatggtcattgggccagggactgcaaagctggtgactggaagaacaaatgctaccgctgt 448 Query: 492 ggagatagtggccatatagaaagggattgtcagaacagccc 532 ||||| || |||||||| ||||| |||| ||||| ||||| Sbjct: 449 ggagaaaggggccatattgaaagaaattgccagaatagccc 489 Score = 65.9 bits (33), Expect = 3e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 280 ttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 ||||||| |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 261 ttgatgggagccgcattattgttgagtttgctaaaggggttccacgtgg 309
>gb|AY107211.1| Zea mays PCO136611 mRNA sequence Length = 1362 Score = 75.8 bits (38), Expect = 3e-10 Identities = 137/170 (80%) Strand = Plus / Plus Query: 420 aactgtggcattgatggccattgggctcgtgactgcaaagctggcgactggaaaaatagg 479 |||||||| || ||||| || ||||| | ||||| || ||||| ||||||||||||| Sbjct: 416 aactgtggaatggatggtcactgggcaagagactgtaaggctggtgactggaaaaataaa 475 Query: 480 tgctatcgttgtggagatagtggccatatagaaagggattgtcagaacagccctaagaac 539 ||||| ||||||||||| || || ||||||||||| |||| |||||||| |||| || | Sbjct: 476 tgctaccgttgtggagaaagagggcatatagaaagaaattgccagaacagtcctaggagc 535 Query: 540 ctcaagcgtggaaagagttactccagatctccatctcctcgccgcggaag 589 ||| ||||| || |||||||| | || |||||||| ||||| ||||| Sbjct: 536 gtcaggcgtgaaagaagttactcacgctccccatctccacgccgtggaag 585 Score = 46.1 bits (23), Expect = 0.30 Identities = 41/47 (87%) Strand = Plus / Plus Query: 282 gatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 |||||||| ||||| |||| ||||||||||||||||| || ||||| Sbjct: 308 gatggaagtcgcattgttgttgagtttgctaaaggggtcccacgtgg 354
>dbj|AK243386.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100063H15, full insert sequence Length = 5562 Score = 73.8 bits (37), Expect = 1e-09 Identities = 85/101 (84%) Strand = Plus / Plus Query: 228 agtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatgga 287 ||||||||| | |||||||||||||| |||| ||||| ||||| | || |||||||| Sbjct: 301 agtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgttgatgga 360 Query: 288 agccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 |||||||| |||| |||||||||||||| ||||| ||||| Sbjct: 361 agccgcattcttgttgagtttgctaaaggagttccacgtgg 401 Score = 61.9 bits (31), Expect = 5e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 |||||||||||||| | || |||||||| || | || ||||| ||||||||||| ||| Sbjct: 418 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 477 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| | |||||||| ||||| |||||||| || | || || |||||| Sbjct: 478 gatggtcactgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgt 537 Query: 492 ggagatagtggccatatagaaag 514 ||||| || || || |||||||| Sbjct: 538 ggagaaagaggtcacatagaaag 560
>ref|NM_001061266.1| Oryza sativa (japonica cultivar-group) Os05g0162600 (Os05g0162600) mRNA, complete cds Length = 1524 Score = 73.8 bits (37), Expect = 1e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 160 acctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttg 219 |||| ||| ||||||||||||| |||||| ||||||| ||||| |||| | || |||| Sbjct: 220 acctgttcagcagatatgggagggtgcgatttgtggatctgaagaatgaatatggctttg 279 Query: 220 ttgagtttagtgatcccagggatgc 244 ||||||||||||||||| ||||||| Sbjct: 280 ttgagtttagtgatccccgggatgc 304 Score = 60.0 bits (30), Expect = 2e-05 Identities = 117/146 (80%) Strand = Plus / Plus Query: 401 tggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagc 460 |||||||| || |||||| |||||||| || || || || ||| ||| |||||| || Sbjct: 428 tggttctgaccactgcttcaactgtgggatggaggggcactggcaccgtaactgcactgc 487 Query: 461 tggcgactggaaaaataggtgctatcgttgtggagatagtggccatatagaaagggattg 520 ||| ||||||| ||||||||||||| | |||||||| || || |||||| |||||| || Sbjct: 488 tggtgactggacaaataggtgctatggctgtggagagaggggtcatatattaagggaatg 547 Query: 521 tcagaacagccctaagaacctcaagc 546 |||||||||| ||| | ||||||| Sbjct: 548 caagaacagccccaaggatctcaagc 573
>ref|NM_001056306.1| Oryza sativa (japonica cultivar-group) Os03g0285900 (Os03g0285900) mRNA, complete cds Length = 1303 Score = 73.8 bits (37), Expect = 1e-09 Identities = 85/101 (84%) Strand = Plus / Plus Query: 228 agtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatgga 287 ||||||||| | |||||||||||||| |||| ||||| ||||| | || |||||||| Sbjct: 263 agtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgttgatgga 322 Query: 288 agccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 |||||||| |||| |||||||||||||| ||||| ||||| Sbjct: 323 agccgcattcttgttgagtttgctaaaggagttccacgtgg 363 Score = 61.9 bits (31), Expect = 5e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 |||||||||||||| | || |||||||| || | || ||||| ||||||||||| ||| Sbjct: 380 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 439 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| | |||||||| ||||| |||||||| || | || || |||||| Sbjct: 440 gatggtcactgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgt 499 Query: 492 ggagatagtggccatatagaaag 514 ||||| || || || |||||||| Sbjct: 500 ggagaaagaggtcacatagaaag 522
>dbj|AK121854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102C01, full insert sequence Length = 1464 Score = 73.8 bits (37), Expect = 1e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 160 acctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttg 219 |||| ||| ||||||||||||| |||||| ||||||| ||||| |||| | || |||| Sbjct: 222 acctgttcagcagatatgggagggtgcgatttgtggatctgaagaatgaatatggctttg 281 Query: 220 ttgagtttagtgatcccagggatgc 244 ||||||||||||||||| ||||||| Sbjct: 282 ttgagtttagtgatccccgggatgc 306 Score = 60.0 bits (30), Expect = 2e-05 Identities = 117/146 (80%) Strand = Plus / Plus Query: 401 tggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagc 460 |||||||| || |||||| |||||||| || || || || ||| ||| |||||| || Sbjct: 430 tggttctgaccactgcttcaactgtgggatggaggggcactggcaccgtaactgcactgc 489 Query: 461 tggcgactggaaaaataggtgctatcgttgtggagatagtggccatatagaaagggattg 520 ||| ||||||| ||||||||||||| | |||||||| || || |||||| |||||| || Sbjct: 490 tggtgactggacaaataggtgctatggctgtggagagaggggtcatatattaagggaatg 549 Query: 521 tcagaacagccctaagaacctcaagc 546 |||||||||| ||| | ||||||| Sbjct: 550 caagaacagccccaaggatctcaagc 575
>dbj|AK063518.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H05, full insert sequence Length = 1563 Score = 73.8 bits (37), Expect = 1e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 160 acctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttg 219 |||| ||| ||||||||||||| |||||| ||||||| ||||| |||| | || |||| Sbjct: 259 acctgttcagcagatatgggagggtgcgatttgtggatctgaagaatgaatatggctttg 318 Query: 220 ttgagtttagtgatcccagggatgc 244 ||||||||||||||||| ||||||| Sbjct: 319 ttgagtttagtgatccccgggatgc 343 Score = 60.0 bits (30), Expect = 2e-05 Identities = 117/146 (80%) Strand = Plus / Plus Query: 401 tggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagc 460 |||||||| || |||||| |||||||| || || || || ||| ||| |||||| || Sbjct: 467 tggttctgaccactgcttcaactgtgggatggaggggcactggcaccgtaactgcactgc 526 Query: 461 tggcgactggaaaaataggtgctatcgttgtggagatagtggccatatagaaagggattg 520 ||| ||||||| ||||||||||||| | |||||||| || || |||||| |||||| || Sbjct: 527 tggtgactggacaaataggtgctatggctgtggagagaggggtcatatattaagggaatg 586 Query: 521 tcagaacagccctaagaacctcaagc 546 |||||||||| ||| | ||||||| Sbjct: 587 caagaacagccccaaggatctcaagc 612
>ref|NM_179949.2| Arabidopsis thaliana RSZ33; nucleic acid binding (RSZ33) mRNA, complete cds Length = 1162 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 228 ||||||| || ||||||||| ||||||||||||||| || | ||| || ||||| ||| Sbjct: 159 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 218 Query: 229 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 288 |||||||| | ||||||||||| ||||| | |||| || || || ||||||||||||| Sbjct: 219 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 278 Query: 289 gccgcatgattgtcgagttt 308 | ||||| | ||| |||||| Sbjct: 279 gtcgcatcactgtggagttt 298 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 357 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 416 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 417 actggaagaacaagtgttaccgttgtggaga 447
>ref|NM_115210.4| Arabidopsis thaliana RSZ32; nucleic acid binding (RSZ32) mRNA, complete cds Length = 1139 Score = 71.9 bits (36), Expect = 5e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 228 ||||||| || ||||| ||| ||||||||||||||| ||| | ||| |||||||| |||| Sbjct: 168 gcagatacggaagagtacgagatgtggatatgaagcgtgattatgcctttgttgaattta 227 Query: 229 gtgatcccagggatgctgatgaagcaag 256 ||||||| | ||||||||||| ||||| Sbjct: 228 gtgatcctcgtgatgctgatgacgcaag 255 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| ||||| ||||| | |||||||| ||||| || |||||| Sbjct: 356 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 415 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 416 acagcaggagactggaagaata 437
>gb|AY114563.1| Arabidopsis thaliana unknown protein (At2g37340) mRNA, complete cds Length = 1039 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 228 ||||||| || ||||||||| ||||||||||||||| || | ||| || ||||| ||| Sbjct: 95 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 154 Query: 229 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 288 |||||||| | ||||||||||| ||||| | |||| || || || ||||||||||||| Sbjct: 155 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 214 Query: 289 gccgcatgattgtcgagttt 308 | ||||| | ||| |||||| Sbjct: 215 gtcgcatcactgtggagttt 234 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 293 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 352 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 353 actggaagaacaagtgttaccgttgtggaga 383
>gb|AY072315.1| Arabidopsis thaliana unknown protein (At2g37340) mRNA, complete cds Length = 1137 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 228 ||||||| || ||||||||| ||||||||||||||| || | ||| || ||||| ||| Sbjct: 157 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 216 Query: 229 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 288 |||||||| | ||||||||||| ||||| | |||| || || || ||||||||||||| Sbjct: 217 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 276 Query: 289 gccgcatgattgtcgagttt 308 | ||||| | ||| |||||| Sbjct: 277 gtcgcatcactgtggagttt 296 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 355 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 414 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 415 actggaagaacaagtgttaccgttgtggaga 445
>emb|AJ293801.1|ATH293801 Arabidopsis thaliana mRNA for splicing factor RSZ33 Length = 1140 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 228 ||||||| || ||||||||| ||||||||||||||| || | ||| || ||||| ||| Sbjct: 161 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 220 Query: 229 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 288 |||||||| | ||||||||||| ||||| | |||| || || || ||||||||||||| Sbjct: 221 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 280 Query: 289 gccgcatgattgtcgagttt 308 | ||||| | ||| |||||| Sbjct: 281 gtcgcatcactgtggagttt 300 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 359 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 418 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 419 actggaagaacaagtgttaccgttgtggaga 449
>dbj|AK176551.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-07-D13 Length = 1108 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 228 ||||||| || ||||||||| ||||||||||||||| || | ||| || ||||| ||| Sbjct: 164 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 223 Query: 229 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 288 |||||||| | ||||||||||| ||||| | |||| || || || ||||||||||||| Sbjct: 224 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 283 Query: 289 gccgcatgattgtcgagttt 308 | ||||| | ||| |||||| Sbjct: 284 gtcgcatcactgtggagttt 303 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 362 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 421 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 422 actggaagaacaagtgttaccgttgtggaga 452
>emb|BX823008.1|CNS0A4UF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB80ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1054 Score = 71.9 bits (36), Expect = 5e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 228 ||||||| || ||||| ||| ||||||||||||||| ||| | ||| |||||||| |||| Sbjct: 168 gcagatacggaagagtacgagatgtggatatgaagcgtgattatgcctttgttgaattta 227 Query: 229 gtgatcccagggatgctgatgaagcaag 256 ||||||| | ||||||||||| ||||| Sbjct: 228 gtgatcctcgtgatgctgatgacgcaag 255 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| ||||| ||||| | |||||||| ||||| || |||||| Sbjct: 356 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 415 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 416 acagcaggagactggaagaata 437
>emb|BX842469.1|CNS0A9NV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZF04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1091 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 228 ||||||| || ||||||||| ||||||||||||||| || | ||| || ||||| ||| Sbjct: 159 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 218 Query: 229 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 288 |||||||| | ||||||||||| ||||| | |||| || || || ||||||||||||| Sbjct: 219 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 278 Query: 289 gccgcatgattgtcgagttt 308 | ||||| | ||| |||||| Sbjct: 279 gtcgcatcactgtggagttt 298 Score = 61.9 bits (31), Expect = 5e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| | | || | Sbjct: 357 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacaacagggg 416 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 417 actggaagaacaagtgttaccgttgtggaga 447
>ref|NM_201891.1| Arabidopsis thaliana RSZ33; nucleic acid binding (RSZ33) mRNA, complete cds Length = 1369 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 564 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 623 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 624 actggaagaacaagtgttaccgttgtggaga 654 Score = 65.9 bits (33), Expect = 3e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 180 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 239 ||||||||| ||||||||||||||| || | ||| || ||||| ||| |||||||| | Sbjct: 377 agagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttggtgatccccgt 436 Query: 240 gatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaagccgcatgatt 299 ||||||||||| ||||| | |||| || || || |||||||||||||| ||||| | | Sbjct: 437 gatgctgatgatgcaagacattacctggacggacgagactttgatggaagtcgcatcact 496 Query: 300 gtcgagttt 308 || |||||| Sbjct: 497 gtggagttt 505
>ref|NM_201890.1| Arabidopsis thaliana RSZ33; nucleic acid binding (RSZ33) mRNA, complete cds Length = 1306 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 501 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 560 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 561 actggaagaacaagtgttaccgttgtggaga 591 Score = 48.1 bits (24), Expect = 0.077 Identities = 33/36 (91%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagc 204 ||||||| || ||||||||| ||||||||||||||| Sbjct: 163 gcagatacggaagagtgcgagatgtggatatgaagc 198
>gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence Length = 119001 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 40384 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 40325 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 40324 actggaagaacaagtgttaccgttgtggaga 40294 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 agagtgcgacatgtggatatgaagc 204 ||||||||| ||||||||||||||| Sbjct: 40816 agagtgcgagatgtggatatgaagc 40792
>dbj|AK176666.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-20-J02 Length = 1149 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 358 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 417 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 418 actggaagaacaagtgttaccgttgtggaga 448 Score = 63.9 bits (32), Expect = 1e-06 Identities = 113/140 (80%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 228 ||||||| || ||||||||| ||||||||||||||| || | ||| || |||| ||| Sbjct: 160 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgtatttg 219 Query: 229 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 288 |||||||| | ||||||||||| ||||| | |||| || || || ||||||||||||| Sbjct: 220 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 279 Query: 289 gccgcatgattgtcgagttt 308 | ||||| | ||| |||||| Sbjct: 280 gtcgcatcactgtggagttt 299
>emb|BX842467.1|CNS0A9JT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1232 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 501 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 560 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 561 actggaagaacaagtgttaccgttgtggaga 591 Score = 48.1 bits (24), Expect = 0.077 Identities = 33/36 (91%) Strand = Plus / Plus Query: 169 gcagatatgggagagtgcgacatgtggatatgaagc 204 ||||||| || ||||||||| ||||||||||||||| Sbjct: 163 gcagatacggaagagtgcgagatgtggatatgaagc 198
>emb|BX842463.1|CNS0A9GQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS58ZG03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1317 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || | Sbjct: 557 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 616 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 617 actggaagaacaagtgttaccgttgtggaga 647 Score = 65.9 bits (33), Expect = 3e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 180 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 239 ||||||||| ||||||||||||||| || | ||| || ||||| ||| |||||||| | Sbjct: 370 agagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttggtgatccccgt 429 Query: 240 gatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaagccgcatgatt 299 ||||||||||| ||||| | |||| || || || |||||||||||||| ||||| | | Sbjct: 430 gatgctgatgatgcaagacattacctggacggacgagactttgatggaagtcgcatcact 489 Query: 300 gtcgagttt 308 || |||||| Sbjct: 490 gtggagttt 498
>ref|NM_180684.2| Arabidopsis thaliana RSZ32; nucleic acid binding (RSZ32) mRNA, complete cds Length = 1441 Score = 65.9 bits (33), Expect = 3e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 180 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 239 ||||| ||| ||||||||||||||| ||| | ||| |||||||| ||||||||||| | Sbjct: 481 agagtacgagatgtggatatgaagcgtgattatgcctttgttgaatttagtgatcctcgt 540 Query: 240 gatgctgatgaagcaag 256 ||||||||||| ||||| Sbjct: 541 gatgctgatgacgcaag 557 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| ||||| ||||| | |||||||| ||||| || |||||| Sbjct: 658 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 717 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 718 acagcaggagactggaagaata 739
>gb|AY095996.1| Arabidopsis thaliana AT3g53500/F4P12_200 mRNA, complete cds Length = 1369 Score = 65.9 bits (33), Expect = 3e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 180 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 239 ||||| ||| ||||||||||||||| ||| | ||| |||||||| ||||||||||| | Sbjct: 410 agagtacgagatgtggatatgaagcgtgattatgcctttgttgaatttagtgatcctcgt 469 Query: 240 gatgctgatgaagcaag 256 ||||||||||| ||||| Sbjct: 470 gatgctgatgacgcaag 486 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| ||||| ||||| | |||||||| ||||| || |||||| Sbjct: 587 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 646 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 647 acagcaggagactggaagaata 668
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 65.9 bits (33), Expect = 3e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 228 agtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatgga 287 ||||||||| | |||||||||||||| |||| ||||| ||||| | || |||||||| Sbjct: 9824329 agtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgttgatgga 9824270 Query: 288 agccgcatgattgtcgagtttgctaaagg 316 |||||||| |||| |||||||||||||| Sbjct: 9824269 agccgcattcttgttgagtttgctaaagg 9824241 Score = 61.9 bits (31), Expect = 5e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 |||||||||||||| | || |||||||| || | || ||||| ||||||||||| ||| Sbjct: 9824075 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 9824016 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| | |||||||| ||||| |||||||| || | || || |||||| Sbjct: 9824015 gatggtcactgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgt 9823956 Query: 492 ggagatagtggccatatagaaag 514 ||||| || || || |||||||| Sbjct: 9823955 ggagaaagaggtcacatagaaag 9823933
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 65.9 bits (33), Expect = 3e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 228 agtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatgga 287 ||||||||| | |||||||||||||| |||| ||||| ||||| | || |||||||| Sbjct: 48289 agtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgttgatgga 48348 Query: 288 agccgcatgattgtcgagtttgctaaagg 316 |||||||| |||| |||||||||||||| Sbjct: 48349 agccgcattcttgttgagtttgctaaagg 48377 Score = 61.9 bits (31), Expect = 5e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 372 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 431 |||||||||||||| | || |||||||| || | || ||||| ||||||||||| ||| Sbjct: 48543 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 48602 Query: 432 gatggccattgggctcgtgactgcaaagctggcgactggaaaaataggtgctatcgttgt 491 ||||| || ||||| | |||||||| ||||| |||||||| || | || || |||||| Sbjct: 48603 gatggtcactgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgt 48662 Query: 492 ggagatagtggccatatagaaag 514 ||||| || || || |||||||| Sbjct: 48663 ggagaaagaggtcacatagaaag 48685
>emb|BX824622.1|CNS0A6U2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1400 Score = 65.9 bits (33), Expect = 3e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 180 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 239 ||||| ||| ||||||||||||||| ||| | ||| |||||||| ||||||||||| | Sbjct: 481 agagtacgagatgtggatatgaagcgtgattatgcctttgttgaatttagtgatcctcgt 540 Query: 240 gatgctgatgaagcaag 256 ||||||||||| ||||| Sbjct: 541 gatgctgatgacgcaag 557 Score = 44.1 bits (22), Expect = 1.2 Identities = 67/82 (81%) Strand = Plus / Plus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| |||| ||||| | |||||| | ||||| || |||||| Sbjct: 658 cctcctggttctggtcgctgtattaattgtggtgtcgatggcaactgggcccgagactgc 717 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 718 acagcaggagactggaagaata 739
>emb|BX842466.1|CNS0A9HM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH11ZG06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1261 Score = 65.9 bits (33), Expect = 3e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 180 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 239 ||||||||| ||||||||||||||| || | ||| || ||||| ||| |||||||| | Sbjct: 377 agagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttggtgatccccgt 436 Query: 240 gatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaagccgcatgatt 299 ||||||||||| ||||| | |||| || || || |||||||||||||| ||||| | | Sbjct: 437 gatgctgatgatgcaagacattacctggacggacgagactttgatggaagtcgcatcact 496 Query: 300 gtcgagttt 308 || |||||| Sbjct: 497 gtggagttt 505 Score = 54.0 bits (27), Expect = 0.001 Identities = 75/91 (82%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||| ||||| ||||| | ||||| ||||||||||||||||| | ||| || | Sbjct: 564 ctggtcgctgttttaattgtggtgtagatggtcattgggctcgtgactgaacagcagggg 623 Query: 466 actggaaaaataggtgctatcgttgtggaga 496 ||||||| || | ||| || ||||||||||| Sbjct: 624 actggaagaacaagtgttaccgttgtggaga 654
>emb|BX842118.1|CNS09YBX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1317 Score = 61.9 bits (31), Expect = 5e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 180 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 239 ||||| ||| ||||||||||||||| ||| | ||| |||||||| ||||||||||| | Sbjct: 395 agagtacgagatgtggatatgaagcgtgattatgcctttgttgaatttagtgatcctcgt 454 Query: 240 gatgctgatga 250 ||||||||||| Sbjct: 455 gatgctgatga 465 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| ||||| ||||| | |||||||| ||||| || |||||| Sbjct: 572 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 631 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 632 acagcaggagactggaagaata 653
>gb|BT016393.1| Zea mays clone Contig226 mRNA sequence Length = 1003 Score = 60.0 bits (30), Expect = 2e-05 Identities = 114/142 (80%) Strand = Plus / Plus Query: 408 ggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcgac 467 ||||| || ||||||||||| ||||||| || ||||| | ||||| | ||||| ||| Sbjct: 96 ggccgttgttttaactgtggagttgatggtcactgggcaagagactgtcaggctggtgac 155 Query: 468 tggaaaaataggtgctatcgttgtggagatagtggccatatagaaagggattgtcagaac 527 ||||| || | ||||| |||||||| || || |||||||||||||| |||| |||||| Sbjct: 156 tggaagaacaaatgctaccgttgtggcgaaaggggccatatagaaagaaattgccagaac 215 Query: 528 agccctaagaacctcaagcgtg 549 || || | |||||||| ||||| Sbjct: 216 agtccaaggaacctcaggcgtg 237 Score = 48.1 bits (24), Expect = 0.077 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 gccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 ||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 8 gccgcattattgttgaatttgctaaaggggttcctcgtgg 47
>gb|BT001034.1| Arabidopsis thaliana At3g53500/F4P12_200 mRNA, complete cds Length = 732 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| ||||| ||||| | |||||||| ||||| || |||||| Sbjct: 160 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 219 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 220 acagcaggagactggaagaata 241 Score = 46.1 bits (23), Expect = 0.30 Identities = 50/59 (84%) Strand = Plus / Plus Query: 198 atgaagcatgagtttgcatttgttgagtttagtgatcccagggatgctgatgaagcaag 256 ||||||| ||| | ||| |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 1 atgaagcgtgattatgcctttgttgaatttagtgatcctcgtgatgctgatgacgcaag 59
>emb|BX822765.1|CNS0A76B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1703 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| ||||| ||||| | |||||||| ||||| || |||||| Sbjct: 958 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 1017 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 1018 acagcaggagactggaagaata 1039
>emb|BX822711.1|CNS0A76Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1708 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| ||||| ||||| | |||||||| ||||| || |||||| Sbjct: 959 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 1018 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 1019 acagcaggagactggaagaata 1040
>emb|BX823668.1|CNS0A4WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS64ZE12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1446 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| ||||| ||||| | |||||||| ||||| || |||||| Sbjct: 693 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 752 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 753 acagcaggagactggaagaata 774
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 396 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 455 |||||||||||||| ||||| ||||| ||||| | |||||||| ||||| || |||||| Sbjct: 76194 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 76135 Query: 456 aaagctggcgactggaaaaata 477 | ||| || |||||||| |||| Sbjct: 76134 acagcaggagactggaagaata 76113
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 58.0 bits (29), Expect = 8e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 401 tggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagc 460 |||||||| || |||||| |||||||| || || || || ||| ||| |||||| || Sbjct: 37644 tggttctgaccactgcttcaactgtgggatggaggggcactggcaccgtaactgcactgc 37585 Query: 461 tggcgactggaaaaataggtgctatcgttgtggagatagtggccatatagaaagggattg 520 ||| ||||||| ||||||||||||| | |||||||| || || |||||| |||||| || Sbjct: 37584 tggtgactggacaaataggtgctatggctgtggagagaggggtcatatattaagggaatg 37525 Query: 521 tcagaacagccctaagaacctcaag 545 |||||||||| ||| | |||||| Sbjct: 37524 caagaacagccccaaggatctcaag 37500
>gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complete sequence Length = 70712 Score = 54.0 bits (27), Expect = 0.001 Identities = 89/109 (81%), Gaps = 3/109 (2%) Strand = Plus / Plus Query: 406 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 465 |||| ||||||| ||||||||| || ||||| |||| |||||| |||||||||| | Sbjct: 41637 ctggacgctgctataactgtggaatggatggg---tgggttcgtgattgcaaagctgatg 41693 Query: 466 actggaaaaataggtgctatcgttgtggagatagtggccatatagaaag 514 |||||| | ||||||||| ||| |||||||| |||||||||||||| Sbjct: 41694 actggagagataggtgctttcggtgtggagaactgggccatatagaaag 41742
>ref|XM_416998.2| PREDICTED: Gallus gallus similar to chromosome 13 open reading frame 10 (LOC418804), mRNA Length = 4108 Score = 48.1 bits (24), Expect = 0.077 Identities = 27/28 (96%) Strand = Plus / Plus Query: 603 agctacagcaggagtcgcagtaggagct 630 ||||||||||||||||| |||||||||| Sbjct: 930 agctacagcaggagtcggagtaggagct 957
>ref|XM_001226124.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_10858) mRNA, complete cds Length = 816 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 342 ggtgaccgtgaccgtggccgtggtggt 368 |||||||||| |||||||||||||||| Sbjct: 82 ggtgaccgtggccgtggccgtggtggt 108
>ref|XM_368131.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01113.4) partial mRNA Length = 513 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 ccgtggccgtggtggtgaccgtg 375 ||||||||||||||||||||||| Sbjct: 354 ccgtggccgtggtggtgaccgtg 376
>gb|BT017169.1| Zea mays clone EL01N0368H11.c mRNA sequence Length = 1011 Score = 46.1 bits (23), Expect = 0.30 Identities = 41/47 (87%) Strand = Plus / Plus Query: 282 gatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 ||||||||||| || ||||| || ||||||||||| ||||| ||||| Sbjct: 68 gatggaagccgtattattgttgaatttgctaaaggagttcctcgtgg 114
>gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 gene sequence Length = 110467 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 353 ccgtggccgtggtggtgaccgtg 375 ||||||||||||||||||||||| Sbjct: 3526 ccgtggccgtggtggtgaccgtg 3504
>emb|BX571971.4| Zebrafish DNA sequence from clone DKEY-227K11 in linkage group 18, complete sequence Length = 153139 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 206 tgagtttgcatttgttgagttta 228 ||||||||||||||||||||||| Sbjct: 48330 tgagtttgcatttgttgagttta 48308
>gb|AY104051.1| Zea mays PCO093410 mRNA sequence Length = 1288 Score = 46.1 bits (23), Expect = 0.30 Identities = 41/47 (87%) Strand = Plus / Plus Query: 282 gatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 328 ||||||||||| || ||||| || ||||||||||| ||||| ||||| Sbjct: 327 gatggaagccgtattattgttgaatttgctaaaggagttcctcgtgg 373
>gb|AC165346.4| Mus musculus BAC clone RP23-354N5 from chromosome 13, complete sequence Length = 233740 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 866 tcctggcagcagaagccctgca 887 |||||||||||||||||||||| Sbjct: 143545 tcctggcagcagaagccctgca 143566
>gb|AC124183.4| Mus musculus BAC clone RP23-213I18 from 13, complete sequence Length = 215251 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 866 tcctggcagcagaagccctgca 887 |||||||||||||||||||||| Sbjct: 151008 tcctggcagcagaagccctgca 150987
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 gtgaccgtgaccgtggccgtgg 364 |||||||||||||||||||||| Sbjct: 3067576 gtgaccgtgaccgtggccgtgg 3067597
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 ggaggtgaccgtgaccgtggcc 360 |||||||||||||||||||||| Sbjct: 2543367 ggaggtgaccgtgaccgtggcc 2543388
>ref|XM_960208.1| Neurospora crassa OR74A hypothetical protein (NCU03201.1) partial mRNA Length = 258 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 343 gtgaccgtgaccgtggccgtggtggtgaccgtga 376 ||||||||| |||||||||||| |||||||||| Sbjct: 108 gtgaccgtggccgtggccgtggccgtgaccgtga 75 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 gtgaccgtgaccgtggccgtgg 364 |||||||||||||||||||||| Sbjct: 114 gtgaccgtgaccgtggccgtgg 93
>gb|DQ244358.1| Zea mays clone 5459 mRNA sequence Length = 778 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ccgtggccgtggtggtgaccg 373 ||||||||||||||||||||| Sbjct: 386 ccgtggccgtggtggtgaccg 406
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 tgaccgtggccgtggtggtga 370 ||||||||||||||||||||| Sbjct: 2113386 tgaccgtggccgtggtggtga 2113366
>ref|XM_361555.1| Magnaporthe grisea 70-15 hypothetical protein (MG04029.4) partial mRNA Length = 3027 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 343 gtgaccgtgaccgtggccgtggtgg 367 ||||||||||||||| ||||||||| Sbjct: 1358 gtgaccgtgaccgtgaccgtggtgg 1382
>gb|DQ202143.1| Uncultured bacterium clone CJRA29 16S ribosomal RNA gene, partial sequence Length = 1364 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 439 attgggctcgtgactgcaaagctgg 463 |||||||| |||||||||||||||| Sbjct: 609 attgggcttgtgactgcaaagctgg 633
>gb|AY307102.1| Erwinia amylovora putative repressor for the acrAB genes (acrR), membrane-fusion protein (acrA), and multidrug efflux transporter (acrB) genes, complete cds Length = 6580 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tgattgtcgagtttgctaaag 315 ||||||||||||||||||||| Sbjct: 5835 tgattgtcgagtttgctaaag 5855
>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence Length = 190816 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 gtgaccgtgaccgtggccgtg 363 ||||||||||||||||||||| Sbjct: 151365 gtgaccgtgaccgtggccgtg 151385
>gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671i11 map 16, complete sequence Length = 186272 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 gtgatcccagggatgctgatg 249 ||||||||||||||||||||| Sbjct: 4994 gtgatcccagggatgctgatg 4974
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 tgaccgtggccgtggtggtga 370 ||||||||||||||||||||| Sbjct: 3771540 tgaccgtggccgtggtggtga 3771560
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgtgaccgtggccgtggtggtgacc 372 |||||||||||||||| |||||||| Sbjct: 331866 cgtgaccgtggccgtgatggtgacc 331842
>gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map 16, complete sequence Length = 217939 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gtgatcccagggatgctgatg 249 ||||||||||||||||||||| Sbjct: 135066 gtgatcccagggatgctgatg 135086
>gb|AC006082.22| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 16 clone ct7-342a4, complete sequence Length = 154201 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gtgatcccagggatgctgatg 249 ||||||||||||||||||||| Sbjct: 26615 gtgatcccagggatgctgatg 26635
>gb|AC118542.20| Mus musculus strain C57BL/6J chromosome 16 clone rp23-117j21, complete sequence Length = 215057 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gtgatcccagggatgctgatg 249 ||||||||||||||||||||| Sbjct: 29227 gtgatcccagggatgctgatg 29247
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 560 ctccagatctccatctcctcg 580 ||||||||||||||||||||| Sbjct: 1513485 ctccagatctccatctcctcg 1513505
>gb|AC096628.14| Mus musculus strain C57BL/6J chromosome 13 clone rp23-81n4, complete sequence Length = 194818 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 gtgaccgtgaccgtggccgtg 363 ||||||||||||||||||||| Sbjct: 88453 gtgaccgtgaccgtggccgtg 88433
>emb|AL669965.13| Mouse DNA sequence from clone RP23-186F24 on chromosome 4, complete sequence Length = 181196 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 261 aaccttgatggtcgtgactttgatg 285 |||||||||||| |||||||||||| Sbjct: 130622 aaccttgatggttgtgactttgatg 130646 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 195,890,205 Number of extensions: 10345256 Number of successful extensions: 199659 Number of sequences better than 10.0: 76 Number of HSP's gapped: 199616 Number of HSP's successfully gapped: 175 Length of query: 1253 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1230 Effective length of database: 18,503,978,556 Effective search space: 22759893623880 Effective search space used: 22759893623880 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)