ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf17a09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001067387.1| Oryza sativa (japonica cultivar-group) Os08g0115800 (Os08g0115800) mRNA, complete cds Length = 1425 Score = 502 bits (253), Expect = e-138 Identities = 386/429 (89%), Gaps = 6/429 (1%) Strand = Plus / Plus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 286 atgagcatctcggtgaacgggcagtcgtgcgtgccgccggggttccggttccacccgacg 345 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 |||||||||||||||| |||||||||| ||||||||| ||||| ||| |||||||||| Sbjct: 346 gaggaggagctgctcaactactacctccgcaagaaggtcgcctccgagcagatcgacctc 405 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaagagcggtgc 473 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 406 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaagagaggtgt 465 Query: 474 aggatcggcaccggcccgcagaacgactggtacctgttcagccacaaggacaagaagtac 533 | ||| || | || |||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 466 aagattgggtcagggccgcagaacgactggtacttcttcagccacaaggacaagaagtac 525 Query: 534 ccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgg 593 |||||||| ||| | || ||| | || || || |||||||||||||||||||||||||| Sbjct: 526 ccgacggggacgaggacgaacagggcgacggcggccgggttctggaaggccaccggccgc 585 Query: 594 gacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtc 653 ||||||||||||||| |||| |||| |||||| ||||||||||||||||||||| Sbjct: 586 gacaaggccatctacaacgcc-----gtcc-accgcattggcatgcgcaagacgctcgtc 639 Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagtaccgc 713 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 640 ttctacaagggccgcgccccccacggccagaagtccgactggatcatgcacgagtaccgc 699 Query: 714 ctcgacgac 722 ||||||||| Sbjct: 700 ctcgacgac 708 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1035 tactccgccagcgacgacgcgctcgaccacatcct 1069 |||||| |||||||||||||||||||||| ||||| Sbjct: 916 tactcctccagcgacgacgcgctcgaccagatcct 950 Score = 46.1 bits (23), Expect = 0.46 Identities = 38/43 (88%) Strand = Plus / Plus Query: 824 gcaggaggacgggtgggtcatctgcagggtgttcaagaagaag 866 ||||||||| || ||||| | ||||||||||||||||||||| Sbjct: 795 gcaggaggatggctgggtggtgtgcagggtgttcaagaagaag 837
>dbj|AK109860.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G11, full insert sequence Length = 1425 Score = 502 bits (253), Expect = e-138 Identities = 386/429 (89%), Gaps = 6/429 (1%) Strand = Plus / Plus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 286 atgagcatctcggtgaacgggcagtcgtgcgtgccgccggggttccggttccacccgacg 345 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 |||||||||||||||| |||||||||| ||||||||| ||||| ||| |||||||||| Sbjct: 346 gaggaggagctgctcaactactacctccgcaagaaggtcgcctccgagcagatcgacctc 405 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaagagcggtgc 473 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 406 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaagagaggtgt 465 Query: 474 aggatcggcaccggcccgcagaacgactggtacctgttcagccacaaggacaagaagtac 533 | ||| || | || |||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 466 aagattgggtcagggccgcagaacgactggtacttcttcagccacaaggacaagaagtac 525 Query: 534 ccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgg 593 |||||||| ||| | || ||| | || || || |||||||||||||||||||||||||| Sbjct: 526 ccgacggggacgaggacgaacagggcgacggcggccgggttctggaaggccaccggccgc 585 Query: 594 gacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtc 653 ||||||||||||||| |||| |||| |||||| ||||||||||||||||||||| Sbjct: 586 gacaaggccatctacaacgcc-----gtcc-accgcattggcatgcgcaagacgctcgtc 639 Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagtaccgc 713 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 640 ttctacaagggccgcgccccccacggccagaagtccgactggatcatgcacgagtaccgc 699 Query: 714 ctcgacgac 722 ||||||||| Sbjct: 700 ctcgacgac 708 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1035 tactccgccagcgacgacgcgctcgaccacatcct 1069 |||||| |||||||||||||||||||||| ||||| Sbjct: 916 tactcctccagcgacgacgcgctcgaccagatcct 950 Score = 46.1 bits (23), Expect = 0.46 Identities = 38/43 (88%) Strand = Plus / Plus Query: 824 gcaggaggacgggtgggtcatctgcagggtgttcaagaagaag 866 ||||||||| || ||||| | ||||||||||||||||||||| Sbjct: 795 gcaggaggatggctgggtggtgtgcagggtgttcaagaagaag 837
>emb|CT833125.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI245A08, full insert sequence Length = 1990 Score = 472 bits (238), Expect = e-129 Identities = 381/429 (88%), Gaps = 6/429 (1%) Strand = Plus / Plus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 314 atgagcatatcggtgaacgggcagtcggtggtgccaccggggttccggttccacccaacg 373 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 ||||||||||| || || |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 374 gaggaggagctcctgacatactacctgaagaagaaggtggcctcggagcgcatcgacctc 433 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaagagcggtgc 473 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 434 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaagagaggtgc 493 Query: 474 aggatcggcaccggcccgcagaacgactggtacctgttcagccacaaggacaagaagtac 533 ||||| || | || |||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 494 aggattgggtcagggccgcagaacgactggtacttcttcagccacaaggacaagaagtac 553 Query: 534 ccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgg 593 |||||||| ||| | || ||||| || || || ||||| |||||||||||||||||||| Sbjct: 554 ccgacggggacgaggacgaaccgggcaacggcggccggcttctggaaggccaccggccgc 613 Query: 594 gacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtc 653 |||||||||||||||| || | ||| |||||||||||||||||| || |||||| Sbjct: 614 gacaaggccatctact------ccagctccaaccgcatcggcatgcgcaaaaccctcgtc 667 Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagtaccgc 713 |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| Sbjct: 668 ttctacaagggccgtgccccccacggccagaaatcagactggatcatgcacgagtaccgc 727 Query: 714 ctcgacgac 722 ||||||||| Sbjct: 728 ctcgacgac 736 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 1300 ccgactgggacacgctcgaccggctcgcggcctcgtacgagct 1342 |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1284 ccgactgggacacgctggaccggctcgcggcgtcgtacgagct 1326 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||||||| || ||||| ||||||||||||||||||||||||||| |||| Sbjct: 842 caggaggaaggctgggtgatctgcagggtgttcaagaagaagaacctcgt 891 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1027 tgctgcactactccgccagcgacgacgcgctcgaccacatcctc 1070 ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1017 tgctgcactcgtccgccagcgacgacgccctcgaccacatcctc 1060 Score = 61.9 bits (31), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 3/73 (4%) Strand = Plus / Plus Query: 1444 ccggggacggcgacctgtggagcctggcgcggtccg---cgtcgtcgctccacgcggact 1500 |||| |||||||||||||||||||| |||||||| | | |||||||| ||||| |||| Sbjct: 1419 ccggcgacggcgacctgtggagccttgcgcggtcggtgtcatcgtcgctacacgcagact 1478 Query: 1501 tgacgacgatgaa 1513 ||||||| ||||| Sbjct: 1479 tgacgaccatgaa 1491 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1196 gttcatgaagctcccgccgctcgagcacgtcg 1227 |||||||||||| ||||||||||||||||||| Sbjct: 1177 gttcatgaagcttccgccgctcgagcacgtcg 1208 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 940 ccatggagcgcagccagagcaactgctcg 968 |||||||| |||||| ||||||||||||| Sbjct: 954 ccatggagggcagcccgagcaactgctcg 982
>emb|CT833124.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA241M20, full insert sequence Length = 1936 Score = 472 bits (238), Expect = e-129 Identities = 381/429 (88%), Gaps = 6/429 (1%) Strand = Plus / Plus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 315 atgagcatatcggtgaacgggcagtcggtggtgccaccggggttccggttccacccaacg 374 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 ||||||||||| || || |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 375 gaggaggagctcctgacatactacctgaagaagaaggtggcctcggagcgcatcgacctc 434 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaagagcggtgc 473 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 435 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaagagaggtgc 494 Query: 474 aggatcggcaccggcccgcagaacgactggtacctgttcagccacaaggacaagaagtac 533 ||||| || | || |||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 495 aggattgggtcagggccgcagaacgactggtacttcttcagccacaaggacaagaagtac 554 Query: 534 ccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgg 593 |||||||| ||| | || ||||| || || || ||||| |||||||||||||||||||| Sbjct: 555 ccgacggggacgaggacgaaccgggcaacggcggccggcttctggaaggccaccggccgc 614 Query: 594 gacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtc 653 |||||||||||||||| || | ||| |||||||||||||||||| || |||||| Sbjct: 615 gacaaggccatctact------ccagctccaaccgcatcggcatgcgcaaaaccctcgtc 668 Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagtaccgc 713 |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| Sbjct: 669 ttctacaagggccgtgccccccacggccagaaatcagactggatcatgcacgagtaccgc 728 Query: 714 ctcgacgac 722 ||||||||| Sbjct: 729 ctcgacgac 737 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 1300 ccgactgggacacgctcgaccggctcgcggcctcgtacgagct 1342 |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1285 ccgactgggacacgctggaccggctcgcggcgtcgtacgagct 1327 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||||||| || ||||| ||||||||||||||||||||||||||| |||| Sbjct: 843 caggaggaaggctgggtgatctgcagggtgttcaagaagaagaacctcgt 892 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1027 tgctgcactactccgccagcgacgacgcgctcgaccacatcctc 1070 ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1018 tgctgcactcgtccgccagcgacgacgccctcgaccacatcctc 1061 Score = 61.9 bits (31), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 3/73 (4%) Strand = Plus / Plus Query: 1444 ccggggacggcgacctgtggagcctggcgcggtccg---cgtcgtcgctccacgcggact 1500 |||| |||||||||||||||||||| |||||||| | | |||||||| ||||| |||| Sbjct: 1420 ccggcgacggcgacctgtggagccttgcgcggtcggtgtcatcgtcgctacacgcagact 1479 Query: 1501 tgacgacgatgaa 1513 ||||||| ||||| Sbjct: 1480 tgacgaccatgaa 1492 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1196 gttcatgaagctcccgccgctcgagcacgtcg 1227 |||||||||||| ||||||||||||||||||| Sbjct: 1178 gttcatgaagcttccgccgctcgagcacgtcg 1209 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 940 ccatggagcgcagccagagcaactgctcg 968 |||||||| |||||| ||||||||||||| Sbjct: 955 ccatggagggcagcccgagcaactgctcg 983
>ref|NM_001063232.1| Oryza sativa (japonica cultivar-group) Os06g0131700 (Os06g0131700) mRNA, complete cds Length = 1672 Score = 464 bits (234), Expect = e-127 Identities = 380/429 (88%), Gaps = 6/429 (1%) Strand = Plus / Plus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 44 atgagcatatcggtgaacgggcagtcggtggtgccaccggggttccggttccacccaacg 103 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 ||||||||||| || || |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 104 gaggaggagctcctgacatactacctgaagaagaaggtggcctcggagcgcatcgacctc 163 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaagagcggtgc 473 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 164 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaagagaggtgc 223 Query: 474 aggatcggcaccggcccgcagaacgactggtacctgttcagccacaaggacaagaagtac 533 ||||| || | || ||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 224 aggattgggtcagggccgcaaaacgactggtacttcttcagccacaaggacaagaagtac 283 Query: 534 ccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgg 593 |||||||| ||| | || ||||| || || || ||||| |||||||||||||||||||| Sbjct: 284 ccgacggggacgaggacgaaccgggcaacggcggccggcttctggaaggccaccggccgc 343 Query: 594 gacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtc 653 |||||||||||||||| || | ||| |||||||||||||||||| || |||||| Sbjct: 344 gacaaggccatctact------ccagctccaaccgcatcggcatgcgcaaaaccctcgtc 397 Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagtaccgc 713 |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| Sbjct: 398 ttctacaagggccgtgccccccacggccagaaatcagactggatcatgcacgagtaccgc 457 Query: 714 ctcgacgac 722 ||||||||| Sbjct: 458 ctcgacgac 466 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 1300 ccgactgggacacgctcgaccggctcgcggcctcgtacgagct 1342 |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 964 ccgactgggacacgctggaccggctcgcggcgtcgtacgagct 1006 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||||||| || ||||| ||||||||||||||||||||||||||| |||| Sbjct: 572 caggaggaaggctgggtgatctgcagggtgttcaagaagaagaacctcgt 621 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1027 tgctgcactactccgccagcgacgacgcgctcgaccacatcctc 1070 ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 697 tgctgcactcgtccgccagcgacgacgccctcgaccacatcctc 740 Score = 61.9 bits (31), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 3/73 (4%) Strand = Plus / Plus Query: 1444 ccggggacggcgacctgtggagcctggcgcggtccg---cgtcgtcgctccacgcggact 1500 |||| |||||||||||||||||||| |||||||| | | |||||||| ||||| |||| Sbjct: 1099 ccggcgacggcgacctgtggagccttgcgcggtcggtgtcatcgtcgctacacgcagact 1158 Query: 1501 tgacgacgatgaa 1513 ||||||| ||||| Sbjct: 1159 tgacgaccatgaa 1171 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1196 gttcatgaagctcccgccgctcgagcacgtcg 1227 |||||||||||| ||||||||||||||||||| Sbjct: 857 gttcatgaagcttccgccgctcgagcacgtcg 888 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 940 ccatggagcgcagccagagcaactgctcg 968 |||||||| |||||| ||||||||||||| Sbjct: 634 ccatggagggcagcccgagcaactgctcg 662
>dbj|AK062952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-C09, full insert sequence Length = 1672 Score = 464 bits (234), Expect = e-127 Identities = 380/429 (88%), Gaps = 6/429 (1%) Strand = Plus / Plus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 44 atgagcatatcggtgaacgggcagtcggtggtgccaccggggttccggttccacccaacg 103 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 ||||||||||| || || |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 104 gaggaggagctcctgacatactacctgaagaagaaggtggcctcggagcgcatcgacctc 163 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaagagcggtgc 473 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 164 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaagagaggtgc 223 Query: 474 aggatcggcaccggcccgcagaacgactggtacctgttcagccacaaggacaagaagtac 533 ||||| || | || ||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 224 aggattgggtcagggccgcaaaacgactggtacttcttcagccacaaggacaagaagtac 283 Query: 534 ccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgg 593 |||||||| ||| | || ||||| || || || ||||| |||||||||||||||||||| Sbjct: 284 ccgacggggacgaggacgaaccgggcaacggcggccggcttctggaaggccaccggccgc 343 Query: 594 gacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtc 653 |||||||||||||||| || | ||| |||||||||||||||||| || |||||| Sbjct: 344 gacaaggccatctact------ccagctccaaccgcatcggcatgcgcaaaaccctcgtc 397 Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagtaccgc 713 |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| Sbjct: 398 ttctacaagggccgtgccccccacggccagaaatcagactggatcatgcacgagtaccgc 457 Query: 714 ctcgacgac 722 ||||||||| Sbjct: 458 ctcgacgac 466 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 1300 ccgactgggacacgctcgaccggctcgcggcctcgtacgagct 1342 |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 964 ccgactgggacacgctggaccggctcgcggcgtcgtacgagct 1006 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||||||| || ||||| ||||||||||||||||||||||||||| |||| Sbjct: 572 caggaggaaggctgggtgatctgcagggtgttcaagaagaagaacctcgt 621 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1027 tgctgcactactccgccagcgacgacgcgctcgaccacatcctc 1070 ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 697 tgctgcactcgtccgccagcgacgacgccctcgaccacatcctc 740 Score = 61.9 bits (31), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 3/73 (4%) Strand = Plus / Plus Query: 1444 ccggggacggcgacctgtggagcctggcgcggtccg---cgtcgtcgctccacgcggact 1500 |||| |||||||||||||||||||| |||||||| | | |||||||| ||||| |||| Sbjct: 1099 ccggcgacggcgacctgtggagccttgcgcggtcggtgtcatcgtcgctacacgcagact 1158 Query: 1501 tgacgacgatgaa 1513 ||||||| ||||| Sbjct: 1159 tgacgaccatgaa 1171 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1196 gttcatgaagctcccgccgctcgagcacgtcg 1227 |||||||||||| ||||||||||||||||||| Sbjct: 857 gttcatgaagcttccgccgctcgagcacgtcg 888 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 940 ccatggagcgcagccagagcaactgctcg 968 |||||||| |||||| ||||||||||||| Sbjct: 634 ccatggagggcagcccgagcaactgctcg 662
>dbj|AK119784.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F05, full insert sequence Length = 1774 Score = 456 bits (230), Expect = e-124 Identities = 379/429 (88%), Gaps = 6/429 (1%) Strand = Plus / Plus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 91 atgagcatatcggtgaacgggcagtcggtggtgccaccggggttccggttccacccaacg 150 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 ||||||||||| || || |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 151 gaggaggagctcctgacatactacctgaagaagaaggtggcctcggagcgcatcgacctc 210 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaagagcggtgc 473 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 211 gacgtcatctgcgacgtcgacctcaacaagctcgagccatgggacatccaagagaggtgc 270 Query: 474 aggatcggcaccggcccgcagaacgactggtacctgttcagccacaaggacaagaagtac 533 ||||| || | || ||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 271 aggattgggtcagggccgcaaaacgactggtacttcttcagccacaaggacaagaagtac 330 Query: 534 ccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgg 593 |||||||| ||| | || ||||| || || || ||||| |||||||||||||||||||| Sbjct: 331 ccgacggggacgaggacgaaccgggcaacggcggccggcttctggaaggccaccggccgc 390 Query: 594 gacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtc 653 |||||||||||||||| || | ||| |||||||||||||||||| || |||||| Sbjct: 391 gacaaggccatctact------ccagctccaaccgcatcggcatgcgcaaaaccctcgtc 444 Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagtaccgc 713 |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| Sbjct: 445 ttctacaagggccgtgccccccacggccagaaatcagactggatcatgcacgagtaccgc 504 Query: 714 ctcgacgac 722 ||||||||| Sbjct: 505 ctcgacgac 513 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||||||| || ||||| ||||||||||||||||||||||||||| |||| Sbjct: 619 caggaggaaggctgggtgatctgcagggtgttcaagaagaagaacctcgt 668 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1027 tgctgcactactccgccagcgacgacgcgctcgaccacatcctc 1070 ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 794 tgctgcactcgtccgccagcgacgacgccctcgaccacatcctc 837 Score = 61.9 bits (31), Expect = 8e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1300 ccgactgggacacgctcgaccggctcgcggcctcgtacgagct 1342 |||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 1061 ccgactgggacacgctggtccggctcgcggcgtcgtacgagct 1103 Score = 61.9 bits (31), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 3/73 (4%) Strand = Plus / Plus Query: 1444 ccggggacggcgacctgtggagcctggcgcggtccg---cgtcgtcgctccacgcggact 1500 |||| |||||||||||||||||||| |||||||| | | |||||||| ||||| |||| Sbjct: 1196 ccggcgacggcgacctgtggagccttgcgcggtcggtgtcatcgtcgctacacgcagact 1255 Query: 1501 tgacgacgatgaa 1513 ||||||| ||||| Sbjct: 1256 tgacgaccatgaa 1268 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1196 gttcatgaagctcccgccgctcgagcacgtcg 1227 |||||||||||| ||||||||||||||||||| Sbjct: 954 gttcatgaagcttccgccgctcgagcacgtcg 985 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 940 ccatggagcgcagccagagcaactgctcg 968 |||||||| |||||| ||||||||||||| Sbjct: 731 ccatggagggcagcccgagcaactgctcg 759
>gb|AF488416.1| Zea mays chromosome 9 BAC 9C20 complete sequence Length = 143300 Score = 337 bits (170), Expect = 9e-89 Identities = 220/234 (94%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 486 ggcccgcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacg 545 ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct: 15130 ggcccccagaacgactggtacttcttcagccacaaggacaagaagtacccgacggggacg 15189 Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatc 605 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 15190 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgcgacaaggccatc 15249 Query: 606 tactccgccgccggg-tccggccgcatcggcatgcgcaagacgctcgtcttctacaaggg 664 ||| || ||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 15250 tacgcc-tcgccgggcgcccgccgcatcggcatgcgcaagacgctcgtcttctacaaggg 15308 Query: 665 ccgcgccccccacggccacaagtccgactggatcatgcacgagtaccgcctcga 718 ||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 15309 ccgcgccccgcacgggcagaagtccgactggatcatgcacgagtaccgcctcga 15362 Score = 236 bits (119), Expect = 2e-58 Identities = 161/175 (92%) Strand = Plus / Plus Query: 291 atcatgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccg 350 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 14793 atcatgagcatctcggtgaacgggcagtcggtggtgccgccggggttccgtttccacccg 14852 Query: 351 acggaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgac 410 ||||||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||| Sbjct: 14853 acggaggaggagctgctgacctactacctgaagaagaaggtggcgtcggagcgcatcgac 14912 Query: 411 ctcgacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaag 465 || |||||||||| |||||||||||| |||||||| ||||||||||||||||||| Sbjct: 14913 ctggacgtcatccgcgacgtcgacctgaacaagctggagccatgggacatccaag 14967 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Plus Query: 1442 cgccggggacggcgacctgtggagcctggcgcggtccgcgtcgtcgctccacgcggactt 1501 ||||| ||||||||||||||||||||| || ||||||| |||| |||| ||||||||||| Sbjct: 18662 cgccgtggacggcgacctgtggagcctcgcacggtccgtgtcggcgctgcacgcggactt 18721 Query: 1502 gac 1504 ||| Sbjct: 18722 gac 18724 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 829 aggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||| |||||||| ||||||||||||||||||||||||||| |||| Sbjct: 18013 aggaggggtgggtgatctgcagggtgttcaagaagaagaacctcgt 18058 Score = 50.1 bits (25), Expect = 0.029 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1196 gttcatgaagctcccgccgctcgagcacg 1224 |||||||||||||||||| |||||||||| Sbjct: 18443 gttcatgaagctcccgcccctcgagcacg 18471
>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence Length = 130987 Score = 315 bits (159), Expect = 3e-82 Identities = 215/233 (92%), Gaps = 3/233 (1%) Strand = Plus / Plus Query: 486 ggcccgcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacg 545 ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct: 49986 ggcccccagaacgactggtacttcttcagccacaaggacaagaagtacccgacggggacg 50045 Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatc 605 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 50046 cgcaccaaccgcgccaccgccgccggcttctggaaggccaccggccgcgacaaggccatc 50105 Query: 606 tactccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtcttctacaagggc 665 || ||| |||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 50106 ta---cgcgtccggcgcccgccgcatcggcatgcgcaagacgctcgtcttctacaagggt 50162 Query: 666 cgcgccccccacggccacaagtccgactggatcatgcacgagtaccgcctcga 718 || ||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 50163 cgtgccccgcacggccagaagtccgactggatcatgcacgagtaccgcctcga 50215 Score = 252 bits (127), Expect = 4e-63 Identities = 163/175 (93%) Strand = Plus / Plus Query: 291 atcatgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 49653 atcatgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccacccg 49712 Query: 351 acggaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgac 410 |||||||||||||| || |||||||||||| ||||||||||| ||| |||| |||||| Sbjct: 49713 acggaggaggagcttctgacctactacctcaagaagaaggtggcgtcggagcgcatcgac 49772 Query: 411 ctcgacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaag 465 || |||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 49773 ctggacgtcatccgcgacgtcgacctgaacaagctcgagccatgggacatccaag 49827 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 829 aggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||| |||||||| ||||||||||||||||||||||||||| |||| Sbjct: 52259 aggaagggtgggtgatctgcagggtgttcaagaagaagaacctcgt 52304 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 1449 gacggcgacctgtggagcctggcgcggtccgcgtcgtcgctccacgcggacttgacga 1506 |||||||||||||||||||||||| |||| | |||| || | |||||||||||||||| Sbjct: 52891 gacggcgacctgtggagcctggcgaggtcggtgtcggcgttgcacgcggacttgacga 52948 Score = 50.1 bits (25), Expect = 0.029 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1196 gttcatgaagctcccgccgctcgagcacg 1224 |||||||||||||||||| |||||||||| Sbjct: 52641 gttcatgaagctcccgcccctcgagcacg 52669 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1046 cgacgacgcgctcgaccacatcct 1069 |||||||||||||||||||||||| Sbjct: 52476 cgacgacgcgctcgaccacatcct 52499 Score = 44.1 bits (22), Expect = 1.8 Identities = 53/62 (85%), Gaps = 6/62 (9%) Strand = Plus / Plus Query: 1300 ccgactgggacacgctcgaccggctcgcggcctcgtacgagctgatcaacggcctctccg 1359 ||||||||||| |||| ||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 52745 ccgactgggacgcgctggaccggctc---gccgcgtacgagc---tcaacggcctctccg 52798 Query: 1360 ac 1361 || Sbjct: 52799 ac 52800 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 939 cccatggagcgcagccagagcaactgctcgtcg 971 ||||||||| |||||| |||| ||||||||||| Sbjct: 52372 cccatggagggcagcccgagccactgctcgtcg 52404
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 274 bits (138), Expect = 1e-69 Identities = 211/234 (90%), Gaps = 6/234 (2%) Strand = Plus / Plus Query: 489 ccgcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgc 548 |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| | Sbjct: 850389 ccgcagaacgactggtacttcttcagccacaaggacaagaagtacccgacggggacgagg 850448 Query: 549 accaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatctac 608 || ||| | || || || |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 850449 acgaacagggcgacggcggccgggttctggaaggccaccggccgcgacaaggccatctac 850508 Query: 609 tccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtcttctacaagggccgc 668 ||||| ||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 850509 aacgccg-----tcca-ccgcattggcatgcgcaagacgctcgtcttctacaagggccgc 850562 Query: 669 gccccccacggccacaagtccgactggatcatgcacgagtaccgcctcgacgac 722 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 850563 gccccccacggccagaagtccgactggatcatgcacgagtaccgcctcgacgac 850616 Score = 246 bits (124), Expect = 2e-61 Identities = 160/172 (93%) Strand = Plus / Plus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 850047 atgagcatctcggtgaacgggcagtcgtgcgtgccgccggggttccggttccacccgacg 850106 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 |||||||||||||||| |||||||||| ||||||||| ||||| ||| |||||||||| Sbjct: 850107 gaggaggagctgctcaactactacctccgcaagaaggtcgcctccgagcagatcgacctc 850166 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaag 465 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 850167 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaag 850218 Score = 99.6 bits (50), Expect = 4e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 ||||||||||||||| |||| || |||||||||||||||||| | ||||||||||||| Sbjct: 205706 gtgccgccggggttcaggtttcacccgacggaggaggagctggtgggctactacctcgcc 205647 Query: 384 aagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaag 443 | |||||||||||| ||| |||||| |||||| |||||| || |||| ||| ||| | Sbjct: 205646 aggaaggtggcctcccagaagatcgatctcgacatcatccaggagctcgatctctacagg 205587 Query: 444 ctcgagccatggga 457 ||||||||||||| Sbjct: 205586 atcgagccatggga 205573 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Minus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 ||||||||||||||||||||||||||||| |||||||||||| | |||| |||| ||| Sbjct: 5842808 tcggcatgcgcaagacgctcgtcttctaccgcggccgcgcccccaagggccgcaagaccg 5842749 Query: 691 actggatcatgcacgagtaccgcctcga 718 | ||| |||||||||||| ||| ||||| Sbjct: 5842748 agtgggtcatgcacgagttccggctcga 5842721 Score = 85.7 bits (43), Expect = 5e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||| || ||||||||||| ||||||||| |||||| ||| ||||||||||||| Sbjct: 205255 aagacgctggtgttctacaagggtcgcgcccccaacggccggaagaccgactggatcatc 205196 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 205195 cacgagtaccgcctc 205181 Score = 79.8 bits (40), Expect = 3e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||||||||||| | |||| | ||| | Sbjct: 25346134 catcggcatgaagaagacgctcgtcttctacaagggccgcgccccgcgcggcgagaagac 25346075 Query: 689 cgactggatcatgcacgagtaccgcctcgacg 720 | | ||| || | ||||||||||||||||||| Sbjct: 25346074 caagtgggtcctccacgagtaccgcctcgacg 25346043 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 25346241 aagtacccgacggggctgcgcaccaaccgcgccaccggcgccggctactggaaggccacc 25346182 Query: 588 ggc 590 ||| Sbjct: 25346181 ggc 25346179 Score = 63.9 bits (32), Expect = 2e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 329 gccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||| ||||||||||||||||| Sbjct: 726064 gccggggttccggttccacccgacggaggaggagct 726099 Score = 61.9 bits (31), Expect = 8e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 549 accaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaag 599 |||||||||||||| || || || |||||||||||||||||||| |||||| Sbjct: 205348 accaaccgcgccacggcggcgggcttctggaaggccaccggccgcgacaag 205298 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 320 ggtggtgccgccggggttccggttccatccgacggaggaggagct 364 |||| |||||||||||||| ||||||| |||||||| |||||||| Sbjct: 26760119 ggtgttgccgccggggttcaggttccacccgacggacgaggagct 26760163 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||||||| ||| | ||||||| |||||||| Sbjct: 28141624 cgcaccaaccgcgccaccgccggcggctactggaagaccaccggc 28141580 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1035 tactccgccagcgacgacgcgctcgaccacatcct 1069 |||||| |||||||||||||||||||||| ||||| Sbjct: 851191 tactcctccagcgacgacgcgctcgaccagatcct 851225 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 |||||||||||||| ||||||| || || || |||||||| |||||| |||||||||| Sbjct: 25346438 tgccgccggggttcaggttccaccccaccgacgaggagctcgtcaccttctacctcgcc 25346380 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Minus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||||||||||||| ||||||||||||| Sbjct: 5844062 cgacgtcgacctcaacaagtgcgagccatgggac 5844029 Score = 52.0 bits (26), Expect = 0.007 Identities = 56/66 (84%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcca 384 ||||| |||||||||||||| || || || |||||||| |||||||||||||||||| Sbjct: 21020656 tgccggcggggttccggttcttccccaccgacgaggagctcgtcacctactacctcgcca 21020597 Query: 385 agaagg 390 ||||| Sbjct: 21020596 ggaagg 21020591 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccgcctcgacg 720 ||||| |||||||||||||||||||||||| Sbjct: 28141485 actgggtcatgcacgagtaccgcctcgacg 28141456 Score = 52.0 bits (26), Expect = 0.007 Identities = 44/50 (88%) Strand = Plus / Minus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||||||||| |||||||| ||||||||| | |||||||||| Sbjct: 28141837 ccgggattccggttccacccgacggatgaggagctggtgtcctactacct 28141788 Score = 50.1 bits (25), Expect = 0.029 Identities = 40/45 (88%) Strand = Plus / Minus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 5842926 cgcaccaaccgcgccacccgctccggctactggaaggccaccggc 5842882 Score = 48.1 bits (24), Expect = 0.12 Identities = 27/28 (96%) Strand = Plus / Minus Query: 836 gtgggtcatctgcagggtgttcaagaag 863 |||||| ||||||||||||||||||||| Sbjct: 21019211 gtgggtgatctgcagggtgttcaagaag 21019184 Score = 46.1 bits (23), Expect = 0.46 Identities = 38/43 (88%) Strand = Plus / Plus Query: 824 gcaggaggacgggtgggtcatctgcagggtgttcaagaagaag 866 ||||||||| || ||||| | ||||||||||||||||||||| Sbjct: 851070 gcaggaggatggctgggtggtgtgcagggtgttcaagaagaag 851112 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||| ||| || |||||| Sbjct: 5844186 tgccgccggggttcaggttccacccgagggacgacgagctg 5844146 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 gtgccgccggggttccggttc 344 ||||||||||||||||||||| Sbjct: 17848936 gtgccgccggggttccggttc 17848916
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 274 bits (138), Expect = 1e-69 Identities = 211/234 (90%), Gaps = 6/234 (2%) Strand = Plus / Plus Query: 489 ccgcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgc 548 |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| | Sbjct: 13127 ccgcagaacgactggtacttcttcagccacaaggacaagaagtacccgacggggacgagg 13186 Query: 549 accaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatctac 608 || ||| | || || || |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 13187 acgaacagggcgacggcggccgggttctggaaggccaccggccgcgacaaggccatctac 13246 Query: 609 tccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtcttctacaagggccgc 668 ||||| ||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 13247 aacgccg-----tcca-ccgcattggcatgcgcaagacgctcgtcttctacaagggccgc 13300 Query: 669 gccccccacggccacaagtccgactggatcatgcacgagtaccgcctcgacgac 722 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 13301 gccccccacggccagaagtccgactggatcatgcacgagtaccgcctcgacgac 13354 Score = 246 bits (124), Expect = 2e-61 Identities = 160/172 (93%) Strand = Plus / Plus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 12785 atgagcatctcggtgaacgggcagtcgtgcgtgccgccggggttccggttccacccgacg 12844 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 |||||||||||||||| |||||||||| ||||||||| ||||| ||| |||||||||| Sbjct: 12845 gaggaggagctgctcaactactacctccgcaagaaggtcgcctccgagcagatcgacctc 12904 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaag 465 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12905 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaag 12956 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1035 tactccgccagcgacgacgcgctcgaccacatcct 1069 |||||| |||||||||||||||||||||| ||||| Sbjct: 13929 tactcctccagcgacgacgcgctcgaccagatcct 13963 Score = 46.1 bits (23), Expect = 0.46 Identities = 38/43 (88%) Strand = Plus / Plus Query: 824 gcaggaggacgggtgggtcatctgcagggtgttcaagaagaag 866 ||||||||| || ||||| | ||||||||||||||||||||| Sbjct: 13808 gcaggaggatggctgggtggtgtgcagggtgttcaagaagaag 13850
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 274 bits (138), Expect = 1e-69 Identities = 211/234 (90%), Gaps = 6/234 (2%) Strand = Plus / Plus Query: 489 ccgcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgc 548 |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| | Sbjct: 149609 ccgcagaacgactggtacttcttcagccacaaggacaagaagtacccgacggggacgagg 149668 Query: 549 accaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatctac 608 || ||| | || || || |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 149669 acgaacagggcgacggcggccgggttctggaaggccaccggccgcgacaaggccatctac 149728 Query: 609 tccgccgccgggtccggccgcatcggcatgcgcaagacgctcgtcttctacaagggccgc 668 ||||| ||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 149729 aacgccg-----tcca-ccgcattggcatgcgcaagacgctcgtcttctacaagggccgc 149782 Query: 669 gccccccacggccacaagtccgactggatcatgcacgagtaccgcctcgacgac 722 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 149783 gccccccacggccagaagtccgactggatcatgcacgagtaccgcctcgacgac 149836 Score = 246 bits (124), Expect = 2e-61 Identities = 160/172 (93%) Strand = Plus / Plus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 149267 atgagcatctcggtgaacgggcagtcgtgcgtgccgccggggttccggttccacccgacg 149326 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 |||||||||||||||| |||||||||| ||||||||| ||||| ||| |||||||||| Sbjct: 149327 gaggaggagctgctcaactactacctccgcaagaaggtcgcctccgagcagatcgacctc 149386 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaag 465 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 149387 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaag 149438 Score = 63.9 bits (32), Expect = 2e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 329 gccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||| ||||||||||||||||| Sbjct: 25284 gccggggttccggttccacccgacggaggaggagct 25319 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1035 tactccgccagcgacgacgcgctcgaccacatcct 1069 |||||| |||||||||||||||||||||| ||||| Sbjct: 150411 tactcctccagcgacgacgcgctcgaccagatcct 150445 Score = 46.1 bits (23), Expect = 0.46 Identities = 38/43 (88%) Strand = Plus / Plus Query: 824 gcaggaggacgggtgggtcatctgcagggtgttcaagaagaag 866 ||||||||| || ||||| | ||||||||||||||||||||| Sbjct: 150290 gcaggaggatggctgggtggtgtgcagggtgttcaagaagaag 150332
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 238 bits (120), Expect = 6e-59 Identities = 224/259 (86%), Gaps = 6/259 (2%) Strand = Plus / Minus Query: 464 agagcggtgcaggatcggcaccggcccgcagaacgactggtacctgttcagccacaagga 523 |||| |||||||||| || | || ||||| |||||||||||| | |||||||||||||| Sbjct: 21404 agagaggtgcaggattgggtcagggccgcaaaacgactggtacttcttcagccacaagga 21345 Query: 524 caagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggc 583 |||||||||||||||||| ||| | || ||||| || || || ||||| ||||||||||| Sbjct: 21344 caagaagtacccgacggggacgaggacgaaccgggcaacggcggccggcttctggaaggc 21285 Query: 584 caccggccgggacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaa 643 ||||||||| |||||||||||||||||| | ||| |||||||||||||||||| Sbjct: 21284 caccggccgcgacaaggccatctactccagc------tccaaccgcatcggcatgcgcaa 21231 Query: 644 gacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgca 703 || |||||||||||||||||||| |||||||||||||| || || |||||||||||||| Sbjct: 21230 aaccctcgtcttctacaagggccgtgccccccacggccagaaatcagactggatcatgca 21171 Query: 704 cgagtaccgcctcgacgac 722 ||||||||||||||||||| Sbjct: 21170 cgagtaccgcctcgacgac 21152 Score = 230 bits (116), Expect = 1e-56 Identities = 158/172 (91%) Strand = Plus / Minus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 21668 atgagcatatcggtgaacgggcagtcggtggtgccaccggggttccggttccacccaacg 21609 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 ||||||||||| || || |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 21608 gaggaggagctcctgacatactacctgaagaagaaggtggcctcggagcgcatcgacctc 21549 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaag 465 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 21548 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaag 21497 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 1300 ccgactgggacacgctcgaccggctcgcggcctcgtacgagct 1342 |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 19381 ccgactgggacacgctggaccggctcgcggcgtcgtacgagct 19339 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||||||| || ||||| ||||||||||||||||||||||||||| |||| Sbjct: 19823 caggaggaaggctgggtgatctgcagggtgttcaagaagaagaacctcgt 19774 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1027 tgctgcactactccgccagcgacgacgcgctcgaccacatcctc 1070 ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 19648 tgctgcactcgtccgccagcgacgacgccctcgaccacatcctc 19605 Score = 61.9 bits (31), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 3/73 (4%) Strand = Plus / Minus Query: 1444 ccggggacggcgacctgtggagcctggcgcggtccg---cgtcgtcgctccacgcggact 1500 |||| |||||||||||||||||||| |||||||| | | |||||||| ||||| |||| Sbjct: 19246 ccggcgacggcgacctgtggagccttgcgcggtcggtgtcatcgtcgctacacgcagact 19187 Query: 1501 tgacgacgatgaa 1513 ||||||| ||||| Sbjct: 19186 tgacgaccatgaa 19174 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 1196 gttcatgaagctcccgccgctcgagcacgtcg 1227 |||||||||||| ||||||||||||||||||| Sbjct: 19488 gttcatgaagcttccgccgctcgagcacgtcg 19457 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 940 ccatggagcgcagccagagcaactgctcg 968 |||||||| |||||| ||||||||||||| Sbjct: 19711 ccatggagggcagcccgagcaactgctcg 19683
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 238 bits (120), Expect = 6e-59 Identities = 224/259 (86%), Gaps = 6/259 (2%) Strand = Plus / Minus Query: 464 agagcggtgcaggatcggcaccggcccgcagaacgactggtacctgttcagccacaagga 523 |||| |||||||||| || | || ||||| |||||||||||| | |||||||||||||| Sbjct: 1701249 agagaggtgcaggattgggtcagggccgcaaaacgactggtacttcttcagccacaagga 1701190 Query: 524 caagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggc 583 |||||||||||||||||| ||| | || ||||| || || || ||||| ||||||||||| Sbjct: 1701189 caagaagtacccgacggggacgaggacgaaccgggcaacggcggccggcttctggaaggc 1701130 Query: 584 caccggccgggacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaa 643 ||||||||| |||||||||||||||||| | ||| |||||||||||||||||| Sbjct: 1701129 caccggccgcgacaaggccatctactccagc------tccaaccgcatcggcatgcgcaa 1701076 Query: 644 gacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgca 703 || |||||||||||||||||||| |||||||||||||| || || |||||||||||||| Sbjct: 1701075 aaccctcgtcttctacaagggccgtgccccccacggccagaaatcagactggatcatgca 1701016 Query: 704 cgagtaccgcctcgacgac 722 ||||||||||||||||||| Sbjct: 1701015 cgagtaccgcctcgacgac 1700997 Score = 230 bits (116), Expect = 1e-56 Identities = 158/172 (91%) Strand = Plus / Minus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 1701513 atgagcatatcggtgaacgggcagtcggtggtgccaccggggttccggttccacccaacg 1701454 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 ||||||||||| || || |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 1701453 gaggaggagctcctgacatactacctgaagaagaaggtggcctcggagcgcatcgacctc 1701394 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaag 465 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1701393 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaag 1701342 Score = 155 bits (78), Expect = 7e-34 Identities = 209/252 (82%), Gaps = 3/252 (1%) Strand = Plus / Minus Query: 468 cggtgcaggatcggcaccggcccgcagaacgactggtacctgttcagccacaaggacaag 527 ||||||||||| || || || || |||||||| |||||| | |||||||||||||||||| Sbjct: 19397914 cggtgcaggatagggacggggcctcagaacgagtggtacttcttcagccacaaggacaag 19397855 Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||||||||| ||| | || ||||| || || | || |||||||||||||| || Sbjct: 19397854 aagtacccgacggggacgaggacgaaccgggcgacgacggcggggttctggaaggcgacg 19397795 Query: 588 ggccgggacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaagacg 647 || ||||||||||||||| | |||| || || |||||||||||||| | ||||| Sbjct: 19397794 gggagggacaaggccatcttcctcgccaacg---cctgccgcatcggcatgaggaagacc 19397738 Query: 648 ctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgag 707 |||||||||||| ||| | || ||||||||| | ||| |||||||||||||||||||| Sbjct: 19397737 ctcgtcttctacgtcggcagggcgccccacggcaagaagaccgactggatcatgcacgag 19397678 Query: 708 taccgcctcgac 719 |||||||||||| Sbjct: 19397677 taccgcctcgac 19397666 Score = 115 bits (58), Expect = 6e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 633 ggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgac 692 |||||| | ||||||||||||| |||| |||||||||||| ||||||||||||||||| Sbjct: 289551 ggcatgaggaagacgctcgtctactaccgcggccgcgcccccaacggccacaagtccgac 289492 Query: 693 tggatcatgcacgagtaccgcctcga 718 |||||||||||||||||||||||||| Sbjct: 289491 tggatcatgcacgagtaccgcctcga 289466 Score = 115 bits (58), Expect = 6e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcac 550 ||||||||| |||||| | |||||||||||||||||||||||||||||||| ||| | || Sbjct: 289696 gcagaacgaatggtacttcttcagccacaaggacaagaagtacccgacggggacgaggac 289637 Query: 551 caaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatctac 608 |||||| || || || ||||||||||||||||| || || || |||||| |||||||| Sbjct: 289636 caaccgtgcgacggcggccgggttctggaaggcgacggggcgagacaagcccatctac 289579 Score = 85.7 bits (43), Expect = 5e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| Sbjct: 13646881 tgccgccggggttccggttccacccgacggacgaggagctgatcacctactacct 13646935 Score = 81.8 bits (41), Expect = 8e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||| |||| ||||||||||||| | |||| |||| |||||||| ||||| Sbjct: 30378244 aagacgctcgtctactacgagggccgcgcccctcgcggcaccaagaccgactgggtcatg 30378185 Query: 702 cacgagtaccgcctcgacgacgccg 726 |||||||||||||| |||||||| Sbjct: 30378184 aacgagtaccgcctccccgacgccg 30378160 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 1300 ccgactgggacacgctcgaccggctcgcggcctcgtacgagct 1342 |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1699226 ccgactgggacacgctggaccggctcgcggcgtcgtacgagct 1699184 Score = 69.9 bits (35), Expect = 3e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||| |||||||||||| |||||||||||| | ||||| ||| || | ||| ||||| Sbjct: 13647189 aagaccctcgtcttctaccgcggccgcgcccccaagggccagaagacccagtgggtcatg 13647248 Query: 702 cacgagtaccgcctcgacg 720 ||||||||||||||||||| Sbjct: 13647249 cacgagtaccgcctcgacg 13647267 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||||||| || ||||| ||||||||||||||||||||||||||| |||| Sbjct: 1699668 caggaggaaggctgggtgatctgcagggtgttcaagaagaagaacctcgt 1699619 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1027 tgctgcactactccgccagcgacgacgcgctcgaccacatcctc 1070 ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1699493 tgctgcactcgtccgccagcgacgacgccctcgaccacatcctc 1699450 Score = 61.9 bits (31), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 3/73 (4%) Strand = Plus / Minus Query: 1444 ccggggacggcgacctgtggagcctggcgcggtccg---cgtcgtcgctccacgcggact 1500 |||| |||||||||||||||||||| |||||||| | | |||||||| ||||| |||| Sbjct: 1699091 ccggcgacggcgacctgtggagccttgcgcggtcggtgtcatcgtcgctacacgcagact 1699032 Query: 1501 tgacgacgatgaa 1513 ||||||| ||||| Sbjct: 1699031 tgacgaccatgaa 1699019 Score = 61.9 bits (31), Expect = 8e-06 Identities = 109/135 (80%) Strand = Plus / Minus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgc 382 |||||| |||||||| |||||||| |||||||| |||||||| ||| ||||||||| Sbjct: 19398189 ggtgccaccggggtttcggttccacccgacggacgaggagctcctctactactacctgag 19398130 Query: 383 caagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaa 442 ||||||||||||| || || || ||||||||||| || ||||||||||||| Sbjct: 19398129 gaagaaggtggcctacgaggccatagatctcgacgtcataagggagatcgacctcaacaa 19398070 Query: 443 gctcgagccatggga 457 ||||||||| ||||| Sbjct: 19398069 gctcgagccctggga 19398055 Score = 61.9 bits (31), Expect = 8e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 329 gccggggttccggttccatccgacggaggaggagctgct 367 |||||| ||| |||||||||||||||||||||||||||| Sbjct: 30378563 gccgggattcaggttccatccgacggaggaggagctgct 30378525 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Minus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||| ||||||||||||| | |||||||||||||||| Sbjct: 155279 ccaaccgctccaccgccgccggctactggaaggccaccggc 155239 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||||||||| | |||||| | |||||||||||||||| Sbjct: 13647093 cgcaccaaccgcgccacgggcgccggctactggaaggccaccggc 13647137 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 1196 gttcatgaagctcccgccgctcgagcacgtcg 1227 |||||||||||| ||||||||||||||||||| Sbjct: 1699333 gttcatgaagcttccgccgctcgagcacgtcg 1699302 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 ctggatcatgcacgagtaccgc 713 |||||||||||||||||||||| Sbjct: 155137 ctggatcatgcacgagtaccgc 155116 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||| ||||||||| ||||||||||||| Sbjct: 27654381 cgacgtcgatctcaacaagtgcgagccatgggac 27654414 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 940 ccatggagcgcagccagagcaactgctcg 968 |||||||| |||||| ||||||||||||| Sbjct: 1699556 ccatggagggcagcccgagcaactgctcg 1699528
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0493C11 Length = 143113 Score = 238 bits (120), Expect = 6e-59 Identities = 224/259 (86%), Gaps = 6/259 (2%) Strand = Plus / Minus Query: 464 agagcggtgcaggatcggcaccggcccgcagaacgactggtacctgttcagccacaagga 523 |||| |||||||||| || | || ||||| |||||||||||| | |||||||||||||| Sbjct: 104420 agagaggtgcaggattgggtcagggccgcaaaacgactggtacttcttcagccacaagga 104361 Query: 524 caagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggc 583 |||||||||||||||||| ||| | || ||||| || || || ||||| ||||||||||| Sbjct: 104360 caagaagtacccgacggggacgaggacgaaccgggcaacggcggccggcttctggaaggc 104301 Query: 584 caccggccgggacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaa 643 ||||||||| |||||||||||||||||| | ||| |||||||||||||||||| Sbjct: 104300 caccggccgcgacaaggccatctactccagc------tccaaccgcatcggcatgcgcaa 104247 Query: 644 gacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgca 703 || |||||||||||||||||||| |||||||||||||| || || |||||||||||||| Sbjct: 104246 aaccctcgtcttctacaagggccgtgccccccacggccagaaatcagactggatcatgca 104187 Query: 704 cgagtaccgcctcgacgac 722 ||||||||||||||||||| Sbjct: 104186 cgagtaccgcctcgacgac 104168 Score = 230 bits (116), Expect = 1e-56 Identities = 158/172 (91%) Strand = Plus / Minus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 104684 atgagcatatcggtgaacgggcagtcggtggtgccaccggggttccggttccacccaacg 104625 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 ||||||||||| || || |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 104624 gaggaggagctcctgacatactacctgaagaagaaggtggcctcggagcgcatcgacctc 104565 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaag 465 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104564 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaag 104513 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 1300 ccgactgggacacgctcgaccggctcgcggcctcgtacgagct 1342 |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 102397 ccgactgggacacgctggaccggctcgcggcgtcgtacgagct 102355 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||||||| || ||||| ||||||||||||||||||||||||||| |||| Sbjct: 102839 caggaggaaggctgggtgatctgcagggtgttcaagaagaagaacctcgt 102790 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1027 tgctgcactactccgccagcgacgacgcgctcgaccacatcctc 1070 ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 102664 tgctgcactcgtccgccagcgacgacgccctcgaccacatcctc 102621 Score = 61.9 bits (31), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 3/73 (4%) Strand = Plus / Minus Query: 1444 ccggggacggcgacctgtggagcctggcgcggtccg---cgtcgtcgctccacgcggact 1500 |||| |||||||||||||||||||| |||||||| | | |||||||| ||||| |||| Sbjct: 102262 ccggcgacggcgacctgtggagccttgcgcggtcggtgtcatcgtcgctacacgcagact 102203 Query: 1501 tgacgacgatgaa 1513 ||||||| ||||| Sbjct: 102202 tgacgaccatgaa 102190 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 1196 gttcatgaagctcccgccgctcgagcacgtcg 1227 |||||||||||| ||||||||||||||||||| Sbjct: 102504 gttcatgaagcttccgccgctcgagcacgtcg 102473 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 940 ccatggagcgcagccagagcaactgctcg 968 |||||||| |||||| ||||||||||||| Sbjct: 102727 ccatggagggcagcccgagcaactgctcg 102699
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 238 bits (120), Expect = 6e-59 Identities = 224/259 (86%), Gaps = 6/259 (2%) Strand = Plus / Minus Query: 464 agagcggtgcaggatcggcaccggcccgcagaacgactggtacctgttcagccacaagga 523 |||| |||||||||| || | || ||||| |||||||||||| | |||||||||||||| Sbjct: 26398 agagaggtgcaggattgggtcagggccgcaaaacgactggtacttcttcagccacaagga 26339 Query: 524 caagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggc 583 |||||||||||||||||| ||| | || ||||| || || || ||||| ||||||||||| Sbjct: 26338 caagaagtacccgacggggacgaggacgaaccgggcaacggcggccggcttctggaaggc 26279 Query: 584 caccggccgggacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaa 643 ||||||||| |||||||||||||||||| | ||| |||||||||||||||||| Sbjct: 26278 caccggccgcgacaaggccatctactccagc------tccaaccgcatcggcatgcgcaa 26225 Query: 644 gacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgca 703 || |||||||||||||||||||| |||||||||||||| || || |||||||||||||| Sbjct: 26224 aaccctcgtcttctacaagggccgtgccccccacggccagaaatcagactggatcatgca 26165 Query: 704 cgagtaccgcctcgacgac 722 ||||||||||||||||||| Sbjct: 26164 cgagtaccgcctcgacgac 26146 Score = 230 bits (116), Expect = 1e-56 Identities = 158/172 (91%) Strand = Plus / Minus Query: 294 atgagcatctcggtgaacgggcagtcggtggtgccgccggggttccggttccatccgacg 353 |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 26662 atgagcatatcggtgaacgggcagtcggtggtgccaccggggttccggttccacccaacg 26603 Query: 354 gaggaggagctgctcacctactacctcgccaagaaggtggcctcgcagcggatcgacctc 413 ||||||||||| || || |||||||| ||||||||||||||| |||| ||||||||| Sbjct: 26602 gaggaggagctcctgacatactacctgaagaagaaggtggcctcggagcgcatcgacctc 26543 Query: 414 gacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatccaag 465 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 26542 gacgtcatccgcgacgtcgacctcaacaagctcgagccatgggacatccaag 26491 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 1300 ccgactgggacacgctcgaccggctcgcggcctcgtacgagct 1342 |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 24375 ccgactgggacacgctggaccggctcgcggcgtcgtacgagct 24333 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaagaagaacatcgt 874 |||||||| || ||||| ||||||||||||||||||||||||||| |||| Sbjct: 24817 caggaggaaggctgggtgatctgcagggtgttcaagaagaagaacctcgt 24768 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1027 tgctgcactactccgccagcgacgacgcgctcgaccacatcctc 1070 ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 24642 tgctgcactcgtccgccagcgacgacgccctcgaccacatcctc 24599 Score = 61.9 bits (31), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 3/73 (4%) Strand = Plus / Minus Query: 1444 ccggggacggcgacctgtggagcctggcgcggtccg---cgtcgtcgctccacgcggact 1500 |||| |||||||||||||||||||| |||||||| | | |||||||| ||||| |||| Sbjct: 24240 ccggcgacggcgacctgtggagccttgcgcggtcggtgtcatcgtcgctacacgcagact 24181 Query: 1501 tgacgacgatgaa 1513 ||||||| ||||| Sbjct: 24180 tgacgaccatgaa 24168 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 1196 gttcatgaagctcccgccgctcgagcacgtcg 1227 |||||||||||| ||||||||||||||||||| Sbjct: 24482 gttcatgaagcttccgccgctcgagcacgtcg 24451 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 940 ccatggagcgcagccagagcaactgctcg 968 |||||||| |||||| ||||||||||||| Sbjct: 24705 ccatggagggcagcccgagcaactgctcg 24677
>ref|NM_001064314.1| Oryza sativa (japonica cultivar-group) Os06g0530400 (Os06g0530400) mRNA, complete cds Length = 1161 Score = 204 bits (103), Expect = 8e-49 Identities = 324/397 (81%), Gaps = 3/397 (0%) Strand = Plus / Plus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgc 382 |||||| |||||||| |||||||| |||||||| |||||||| ||| ||||||||| Sbjct: 116 ggtgccaccggggtttcggttccacccgacggacgaggagctcctctactactacctgag 175 Query: 383 caagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaa 442 ||||||||||||| || || || ||||||||||| || ||||||||||||| Sbjct: 176 gaagaaggtggcctacgaggccatagatctcgacgtcataagggagatcgacctcaacaa 235 Query: 443 gctcgagccatgggacatccaagagcggtgcaggatcggcaccggcccgcagaacgactg 502 ||||||||| ||||| || |||| ||||||||||| || || || || |||||||| || Sbjct: 236 gctcgagccctgggatctcaaagatcggtgcaggatagggacggggcctcagaacgagtg 295 Query: 503 gtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccac 562 |||| | |||||||||||||||||||||||||||||||| ||| | || ||||| || || Sbjct: 296 gtacttcttcagccacaaggacaagaagtacccgacggggacgaggacgaaccgggcgac 355 Query: 563 cgccgccgggttctggaaggccaccggccgggacaaggccatctactccgccgccgggtc 622 | || |||||||||||||| || || ||||||||||||||| | |||| || | Sbjct: 356 gacggcggggttctggaaggcgacggggagggacaaggccatcttcctcgccaacg---c 412 Query: 623 cggccgcatcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggcca 682 | |||||||||||||| | ||||| |||||||||||| ||| | || ||||||||| | Sbjct: 413 ctgccgcatcggcatgaggaagaccctcgtcttctacgtcggcagggcgccccacggcaa 472 Query: 683 caagtccgactggatcatgcacgagtaccgcctcgac 719 ||| |||||||||||||||||||||||||||||||| Sbjct: 473 gaagaccgactggatcatgcacgagtaccgcctcgac 509
>dbj|AK102224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087M22, full insert sequence Length = 2187 Score = 204 bits (103), Expect = 8e-49 Identities = 324/397 (81%), Gaps = 3/397 (0%) Strand = Plus / Plus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgc 382 |||||| |||||||| |||||||| |||||||| |||||||| ||| ||||||||| Sbjct: 173 ggtgccaccggggtttcggttccacccgacggacgaggagctcctctactactacctgag 232 Query: 383 caagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaa 442 ||||||||||||| || || || ||||||||||| || ||||||||||||| Sbjct: 233 gaagaaggtggcctacgaggccatagatctcgacgtcataagggagatcgacctcaacaa 292 Query: 443 gctcgagccatgggacatccaagagcggtgcaggatcggcaccggcccgcagaacgactg 502 ||||||||| ||||| || |||| ||||||||||| || || || || |||||||| || Sbjct: 293 gctcgagccctgggatctcaaagatcggtgcaggatagggacggggcctcagaacgagtg 352 Query: 503 gtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccac 562 |||| | |||||||||||||||||||||||||||||||| ||| | || ||||| || || Sbjct: 353 gtacttcttcagccacaaggacaagaagtacccgacggggacgaggacgaaccgggcgac 412 Query: 563 cgccgccgggttctggaaggccaccggccgggacaaggccatctactccgccgccgggtc 622 | || |||||||||||||| || || ||||||||||||||| | |||| || | Sbjct: 413 gacggcggggttctggaaggcgacggggagggacaaggccatcttcctcgccaacg---c 469 Query: 623 cggccgcatcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggcca 682 | |||||||||||||| | ||||| |||||||||||| ||| | || ||||||||| | Sbjct: 470 ctgccgcatcggcatgaggaagaccctcgtcttctacgtcggcagggcgccccacggcaa 529 Query: 683 caagtccgactggatcatgcacgagtaccgcctcgac 719 ||| |||||||||||||||||||||||||||||||| Sbjct: 530 gaagaccgactggatcatgcacgagtaccgcctcgac 566
>dbj|AB028186.1| Oryza sativa mRNA for OsNAC7 protein, complete cds Length = 1179 Score = 204 bits (103), Expect = 8e-49 Identities = 324/397 (81%), Gaps = 3/397 (0%) Strand = Plus / Plus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgc 382 |||||| |||||||| |||||||| |||||||| |||||||| ||| ||||||||| Sbjct: 116 ggtgccaccggggtttcggttccacccgacggacgaggagctcctctactactacctgag 175 Query: 383 caagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaa 442 ||||||||||||| || || || ||||||||||| || ||||||||||||| Sbjct: 176 gaagaaggtggcctacgaggccatagatctcgacgtcataagggagatcgacctcaacaa 235 Query: 443 gctcgagccatgggacatccaagagcggtgcaggatcggcaccggcccgcagaacgactg 502 ||||||||| ||||| || |||| ||||||||||| || || || || |||||||| || Sbjct: 236 gctcgagccctgggatctcaaagatcggtgcaggatagggacggggcctcagaacgagtg 295 Query: 503 gtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccac 562 |||| | |||||||||||||||||||||||||||||||| ||| | || ||||| || || Sbjct: 296 gtacttcttcagccacaaggacaagaagtacccgacggggacgaggacgaaccgggcgac 355 Query: 563 cgccgccgggttctggaaggccaccggccgggacaaggccatctactccgccgccgggtc 622 | || |||||||||||||| || || ||||||||||||||| | |||| || | Sbjct: 356 gacggcggggttctggaaggcgacggggagggacaaggccatcttcctcgccaacg---c 412 Query: 623 cggccgcatcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggcca 682 | |||||||||||||| | ||||| |||||||||||| ||| | || ||||||||| | Sbjct: 413 ctgccgcatcggcatgaggaagaccctcgtcttctacgtcggcagggcgccccacggcaa 472 Query: 683 caagtccgactggatcatgcacgagtaccgcctcgac 719 ||| |||||||||||||||||||||||||||||||| Sbjct: 473 gaagaccgactggatcatgcacgagtaccgcctcgac 509
>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0438E12 Length = 146851 Score = 155 bits (78), Expect = 7e-34 Identities = 209/252 (82%), Gaps = 3/252 (1%) Strand = Plus / Minus Query: 468 cggtgcaggatcggcaccggcccgcagaacgactggtacctgttcagccacaaggacaag 527 ||||||||||| || || || || |||||||| |||||| | |||||||||||||||||| Sbjct: 102687 cggtgcaggatagggacggggcctcagaacgagtggtacttcttcagccacaaggacaag 102628 Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||||||||| ||| | || ||||| || || | || |||||||||||||| || Sbjct: 102627 aagtacccgacggggacgaggacgaaccgggcgacgacggcggggttctggaaggcgacg 102568 Query: 588 ggccgggacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaagacg 647 || ||||||||||||||| | |||| || || |||||||||||||| | ||||| Sbjct: 102567 gggagggacaaggccatcttcctcgccaacg---cctgccgcatcggcatgaggaagacc 102511 Query: 648 ctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgag 707 |||||||||||| ||| | || ||||||||| | ||| |||||||||||||||||||| Sbjct: 102510 ctcgtcttctacgtcggcagggcgccccacggcaagaagaccgactggatcatgcacgag 102451 Query: 708 taccgcctcgac 719 |||||||||||| Sbjct: 102450 taccgcctcgac 102439 Score = 61.9 bits (31), Expect = 8e-06 Identities = 109/135 (80%) Strand = Plus / Minus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgc 382 |||||| |||||||| |||||||| |||||||| |||||||| ||| ||||||||| Sbjct: 102962 ggtgccaccggggtttcggttccacccgacggacgaggagctcctctactactacctgag 102903 Query: 383 caagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaa 442 ||||||||||||| || || || ||||||||||| || ||||||||||||| Sbjct: 102902 gaagaaggtggcctacgaggccatagatctcgacgtcataagggagatcgacctcaacaa 102843 Query: 443 gctcgagccatggga 457 ||||||||| ||||| Sbjct: 102842 gctcgagccctggga 102828
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 155 bits (78), Expect = 7e-34 Identities = 209/252 (82%), Gaps = 3/252 (1%) Strand = Plus / Minus Query: 468 cggtgcaggatcggcaccggcccgcagaacgactggtacctgttcagccacaaggacaag 527 ||||||||||| || || || || |||||||| |||||| | |||||||||||||||||| Sbjct: 16323 cggtgcaggatagggacggggcctcagaacgagtggtacttcttcagccacaaggacaag 16264 Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||||||||| ||| | || ||||| || || | || |||||||||||||| || Sbjct: 16263 aagtacccgacggggacgaggacgaaccgggcgacgacggcggggttctggaaggcgacg 16204 Query: 588 ggccgggacaaggccatctactccgccgccgggtccggccgcatcggcatgcgcaagacg 647 || ||||||||||||||| | |||| || || |||||||||||||| | ||||| Sbjct: 16203 gggagggacaaggccatcttcctcgccaacg---cctgccgcatcggcatgaggaagacc 16147 Query: 648 ctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgag 707 |||||||||||| ||| | || ||||||||| | ||| |||||||||||||||||||| Sbjct: 16146 ctcgtcttctacgtcggcagggcgccccacggcaagaagaccgactggatcatgcacgag 16087 Query: 708 taccgcctcgac 719 |||||||||||| Sbjct: 16086 taccgcctcgac 16075 Score = 61.9 bits (31), Expect = 8e-06 Identities = 109/135 (80%) Strand = Plus / Minus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgc 382 |||||| |||||||| |||||||| |||||||| |||||||| ||| ||||||||| Sbjct: 16598 ggtgccaccggggtttcggttccacccgacggacgaggagctcctctactactacctgag 16539 Query: 383 caagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaa 442 ||||||||||||| || || || ||||||||||| || ||||||||||||| Sbjct: 16538 gaagaaggtggcctacgaggccatagatctcgacgtcataagggagatcgacctcaacaa 16479 Query: 443 gctcgagccatggga 457 ||||||||| ||||| Sbjct: 16478 gctcgagccctggga 16464
>ref|NM_001052984.1| Oryza sativa (japonica cultivar-group) Os02g0252200 (Os02g0252200) mRNA, complete cds Length = 1561 Score = 149 bits (75), Expect = 4e-32 Identities = 150/175 (85%) Strand = Plus / Plus Query: 432 gacctcaacaagctcgagccatgggacatccaagagcggtgcaggatcggcaccggcccg 491 |||||||||||||| ||||| ||||| || |||| || |||||||| || || || || Sbjct: 380 gacctcaacaagcttgagccttgggatctcaaagatcgatgcaggattgggacgggggcg 439 Query: 492 cagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcacc 551 ||| | || |||||| | |||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 440 caggaggagtggtacttcttcagccacaaggacaagaagtacccgacggggacgaggacc 499 Query: 552 aaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatct 606 ||||||||||| | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 500 aaccgcgccacggtggccggcttctggaaggccaccggccgtgacaaggccatct 554 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 669 gccccccacggccacaagtccgactggatcatgcacgagtaccgcctcgacgacg 723 ||||| |||||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 620 gccccgcacggcaagaagaccgactggatcatgcacgagtaccgcctcgacgacg 674 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 272 gtgccaccgggtttccggttccatccgacggacgaggaattgctctactactacct 327
>dbj|AK101280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033C18, full insert sequence Length = 1459 Score = 149 bits (75), Expect = 4e-32 Identities = 150/175 (85%) Strand = Plus / Plus Query: 432 gacctcaacaagctcgagccatgggacatccaagagcggtgcaggatcggcaccggcccg 491 |||||||||||||| ||||| ||||| || |||| || |||||||| || || || || Sbjct: 278 gacctcaacaagcttgagccttgggatctcaaagatcgatgcaggattgggacgggggcg 337 Query: 492 cagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcacc 551 ||| | || |||||| | |||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 338 caggaggagtggtacttcttcagccacaaggacaagaagtacccgacggggacgaggacc 397 Query: 552 aaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatct 606 ||||||||||| | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 398 aaccgcgccacggtggccggcttctggaaggccaccggccgtgacaaggccatct 452 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 669 gccccccacggccacaagtccgactggatcatgcacgagtaccgcctcgacgacg 723 ||||| |||||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 518 gccccgcacggcaagaagaccgactggatcatgcacgagtaccgcctcgacgacg 572 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 170 gtgccaccgggtttccggttccatccgacggacgaggaattgctctactactacct 225
>dbj|AK063943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E07, full insert sequence Length = 1562 Score = 149 bits (75), Expect = 4e-32 Identities = 150/175 (85%) Strand = Plus / Plus Query: 432 gacctcaacaagctcgagccatgggacatccaagagcggtgcaggatcggcaccggcccg 491 |||||||||||||| ||||| ||||| || |||| || |||||||| || || || || Sbjct: 381 gacctcaacaagcttgagccttgggatctcaaagatcgatgcaggattgggacgggggcg 440 Query: 492 cagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcacc 551 ||| | || |||||| | |||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 441 caggaggagtggtacttcttcagccacaaggacaagaagtacccgacggggacgaggacc 500 Query: 552 aaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatct 606 ||||||||||| | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 501 aaccgcgccacggtggccggcttctggaaggccaccggccgtgacaaggccatct 555 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 669 gccccccacggccacaagtccgactggatcatgcacgagtaccgcctcgacgacg 723 ||||| |||||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 621 gccccgcacggcaagaagaccgactggatcatgcacgagtaccgcctcgacgacg 675 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 273 gtgccaccgggtttccggttccatccgacggacgaggaattgctctactactacct 328
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 145 bits (73), Expect = 7e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 630 atcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtcc 689 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| || Sbjct: 11167 atcggcatgcgcaagacgctcgtcttctaccgcggccgcgccccccacggccagaagacc 11108 Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 ||||||||||||||||||||||||||||| ||||||| Sbjct: 11107 gactggatcatgcacgagtaccgcctcgaggacgccg 11071 Score = 93.7 bits (47), Expect = 2e-15 Identities = 121/143 (84%), Gaps = 2/143 (1%) Strand = Plus / Minus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 ||||||||||||||||||||||| || || || ||||||||||| |||||||||| Sbjct: 11776 gtgccgccggggttccggttccaccccaccgacgaggagctgctgctctactacctcaag 11717 Query: 384 aagaaggt-ggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaa 442 |||||||| || ||| || | |||||||||| ||||||| ||| |||||||||||||| Sbjct: 11716 aagaaggtcgggttcg-agaagttcgacctcgaggtcatccgcgaggtcgacctcaacaa 11658 Query: 443 gctcgagccatgggacatccaag 465 | |||||||||||||| |||||| Sbjct: 11657 gatcgagccatgggacctccaag 11635 Score = 87.7 bits (44), Expect = 1e-13 Identities = 113/136 (83%) Strand = Plus / Minus Query: 464 agagcggtgcaggatcggcaccggcccgcagaacgactggtacctgttcagccacaagga 523 |||| ||||||||||||| | | ||||||||||| |||||| | |||||||||||||| Sbjct: 11327 agagaggtgcaggatcgggtcggcgccgcagaacgagtggtacttcttcagccacaagga 11268 Query: 524 caagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggc 583 | |||||||||||||| || | || ||||||||||| | ||||||||||||||||| Sbjct: 11267 ccgcaagtacccgacggggtcgaggacgaaccgcgccacgacggccgggttctggaaggc 11208 Query: 584 caccggccgggacaag 599 || ||||| |||||| Sbjct: 11207 gacgggccgcgacaag 11192 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 823 cgcaggaggacgggtgggtcatctgcagggtgttcaagaagaag 866 ||||||||||||| ||||| | ||||||||||||||||||||| Sbjct: 10581 cgcaggaggacggatgggtggtgtgcagggtgttcaagaagaag 10538
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 131 bits (66), Expect = 1e-26 Identities = 96/106 (90%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgcc 560 |||||| | |||||||||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 8582410 tggtacttcttcagccacaaggacaagaagtacccgacggggacgaggaccaaccgcgcc 8582469 Query: 561 accgccgccgggttctggaaggccaccggccgggacaaggccatct 606 || | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 8582470 acggtggccggcttctggaaggccaccggccgtgacaaggccatct 8582515 Score = 113 bits (57), Expect = 2e-21 Identities = 102/117 (87%) Strand = Plus / Minus Query: 492 cagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcacc 551 ||||| ||||||||| | ||||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 25879196 cagaatgactggtacttcttcagccacaaagacaaaaagtacccgacgggcacccgcacc 25879137 Query: 552 aaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatctac 608 ||||| ||||| | |||||| ||||||||||| || || |||||||| |||||||| Sbjct: 25879136 aaccgggccacgggcgccggcttctggaaggcgacggggagggacaagcccatctac 25879080 Score = 105 bits (53), Expect = 6e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||| |||||||||||||||||||| |||||| | ||||| ||||| |||||||||||| Sbjct: 25879052 aagacactcgtcttctacaagggccgtgcccccaatggccagaagtcggactggatcatg 25878993 Query: 702 cacgagtaccgcctcga 718 ||||||||||||||||| Sbjct: 25878992 cacgagtaccgcctcga 25878976 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 669 gccccccacggccacaagtccgactggatcatgcacgagtaccgcctcgacgacg 723 ||||| |||||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 8582581 gccccgcacggcaagaagaccgactggatcatgcacgagtaccgcctcgacgacg 8582635 Score = 58.0 bits (29), Expect = 1e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||| | |||||||||||||||||| |||| | || ||| ||||| |||| ||| Sbjct: 24835454 tcggcatgaggaagacgctcgtcttctaccaggggagggcgcccaacggcgtcaagaccg 24835513 Query: 691 actggatcatgcacgagtaccgcctcgac 719 |||| | |||||||||| |||||||||| Sbjct: 24835514 gctgggttatgcacgagttccgcctcgac 24835542 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 8582060 gtgccaccgggtttccggttccatccgacggacgaggaattgctctactactacct 8582115 Score = 56.0 bits (28), Expect = 5e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||||||||| || ||||||||| |||||||||||| ||||| ||| || Sbjct: 34693513 tcggcatgcgcaagacccttgtcttctaccgcggccgcgcccccaacggcgtcaaaacca 34693572 Query: 691 actggatcatgcacga 706 ||||| |||||||||| Sbjct: 34693573 actgggtcatgcacga 34693588 Score = 48.1 bits (24), Expect = 0.12 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1345 tcaacggcctctccgactccgacgtcgc 1372 ||||||||||||||||| |||||||||| Sbjct: 19723190 tcaacggcctctccgacgccgacgtcgc 19723163 Score = 48.1 bits (24), Expect = 0.12 Identities = 60/72 (83%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||||||||| || | ||||||| |||| |||| ||| ||| ||||| Sbjct: 22279032 aagacgctcgtcttctacaccgggagggccccccgcggcggcaagaccggatgggtcatg 22279091 Query: 702 cacgagtaccgc 713 |||||||||||| Sbjct: 22279092 cacgagtaccgc 22279103 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccacc 563 |||||| ||||||| |||||||||||||||||||| Sbjct: 24835339 aagtacgcgacggggtcgcgcaccaaccgcgccacc 24835374 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacgccg 726 ||||| |||||||||||||||||||| |||||||| Sbjct: 35322402 actgggtcatgcacgagtaccgcctcctcgacgccg 35322437 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Minus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||| ||||||||| ||||||||||||| Sbjct: 3529386 cgacgtcgatctcaacaagtgcgagccatgggac 3529353 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1593 cgcatgcatgcatgcacgtactacg 1617 |||||||||||||||| |||||||| Sbjct: 14928551 cgcatgcatgcatgcatgtactacg 14928575 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 921 gccggcgccggcgccgccccc 941 ||||||||||||||||||||| Sbjct: 29591821 gccggcgccggcgccgccccc 29591841
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 131 bits (66), Expect = 1e-26 Identities = 96/106 (90%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgcc 560 |||||| | |||||||||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 51733 tggtacttcttcagccacaaggacaagaagtacccgacggggacgaggaccaaccgcgcc 51792 Query: 561 accgccgccgggttctggaaggccaccggccgggacaaggccatct 606 || | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 51793 acggtggccggcttctggaaggccaccggccgtgacaaggccatct 51838 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 669 gccccccacggccacaagtccgactggatcatgcacgagtaccgcctcgacgacg 723 ||||| |||||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 51904 gccccgcacggcaagaagaccgactggatcatgcacgagtaccgcctcgacgacg 51958 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 51383 gtgccaccgggtttccggttccatccgacggacgaggaattgctctactactacct 51438
>emb|AJ833964.1| Zea mays partial mRNA for hypothetical protein (nac5 gene) Length = 1452 Score = 119 bits (60), Expect = 4e-23 Identities = 144/172 (83%) Strand = Plus / Plus Query: 435 ctcaacaagctcgagccatgggacatccaagagcggtgcaggatcggcaccggcccgcag 494 |||||| |||| ||||||||||| || ||| |||||||||| |||||||| | ||| Sbjct: 139 ctcaaccagcttgagccatgggatctcaaaggtaggtgcaggataggcaccgggcatcag 198 Query: 495 aacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaac 554 ||||| |||||| | |||||||||||||||||||||||||||||||| || | || ||| Sbjct: 199 aacgagtggtacttcttcagccacaaggacaagaagtacccgacgggaacaaggacgaac 258 Query: 555 cgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatct 606 |||||||| | || |||||||||||||| || || || ||||||||||||| Sbjct: 259 cgcgccacgacggcggggttctggaaggcgactgggcgagacaaggccatct 310 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 690 gactggatcatgcacgagtaccgcct 715 |||||||||||||||||||||||||| Sbjct: 394 gactggatcatgcacgagtaccgcct 419
>ref|NM_001063084.1| Oryza sativa (japonica cultivar-group) Os06g0104200 (Os06g0104200) mRNA, complete cds Length = 2350 Score = 115 bits (58), Expect = 6e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcac 550 ||||||||| |||||| | |||||||||||||||||||||||||||||||| ||| | || Sbjct: 1120 gcagaacgaatggtacttcttcagccacaaggacaagaagtacccgacggggacgaggac 1179 Query: 551 caaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatctac 608 |||||| || || || ||||||||||||||||| || || || |||||| |||||||| Sbjct: 1180 caaccgtgcgacggcggccgggttctggaaggcgacggggcgagacaagcccatctac 1237 Score = 115 bits (58), Expect = 6e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 633 ggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgac 692 |||||| | ||||||||||||| |||| |||||||||||| ||||||||||||||||| Sbjct: 1265 ggcatgaggaagacgctcgtctactaccgcggccgcgcccccaacggccacaagtccgac 1324 Query: 693 tggatcatgcacgagtaccgcctcga 718 |||||||||||||||||||||||||| Sbjct: 1325 tggatcatgcacgagtaccgcctcga 1350
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 115 bits (58), Expect = 6e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 633 ggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgac 692 |||||| | ||||||||||||| |||| |||||||||||| ||||||||||||||||| Sbjct: 154447 ggcatgaggaagacgctcgtctactaccgcggccgcgcccccaacggccacaagtccgac 154388 Query: 693 tggatcatgcacgagtaccgcctcga 718 |||||||||||||||||||||||||| Sbjct: 154387 tggatcatgcacgagtaccgcctcga 154362 Score = 115 bits (58), Expect = 6e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcac 550 ||||||||| |||||| | |||||||||||||||||||||||||||||||| ||| | || Sbjct: 154592 gcagaacgaatggtacttcttcagccacaaggacaagaagtacccgacggggacgaggac 154533 Query: 551 caaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatctac 608 |||||| || || || ||||||||||||||||| || || || |||||| |||||||| Sbjct: 154532 caaccgtgcgacggcggccgggttctggaaggcgacggggcgagacaagcccatctac 154475 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Minus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||| ||||||||||||| | |||||||||||||||| Sbjct: 20175 ccaaccgctccaccgccgccggctactggaaggccaccggc 20135 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 692 ctggatcatgcacgagtaccgc 713 |||||||||||||||||||||| Sbjct: 20033 ctggatcatgcacgagtaccgc 20012
>dbj|AK069423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N04, full insert sequence Length = 2350 Score = 115 bits (58), Expect = 6e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcac 550 ||||||||| |||||| | |||||||||||||||||||||||||||||||| ||| | || Sbjct: 1120 gcagaacgaatggtacttcttcagccacaaggacaagaagtacccgacggggacgaggac 1179 Query: 551 caaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatctac 608 |||||| || || || ||||||||||||||||| || || || |||||| |||||||| Sbjct: 1180 caaccgtgcgacggcggccgggttctggaaggcgacggggcgagacaagcccatctac 1237 Score = 115 bits (58), Expect = 6e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 633 ggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgac 692 |||||| | ||||||||||||| |||| |||||||||||| ||||||||||||||||| Sbjct: 1265 ggcatgaggaagacgctcgtctactaccgcggccgcgcccccaacggccacaagtccgac 1324 Query: 693 tggatcatgcacgagtaccgcctcga 718 |||||||||||||||||||||||||| Sbjct: 1325 tggatcatgcacgagtaccgcctcga 1350
>ref|NM_001059959.1| Oryza sativa (japonica cultivar-group) Os04g0536500 (Os04g0536500) mRNA, complete cds Length = 1418 Score = 113 bits (57), Expect = 2e-21 Identities = 96/109 (88%) Strand = Plus / Plus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcac 550 ||||||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 358 gcagaacgagtggtacttcttcagccacaaggacaagaagtacccgacgggcacacgcac 417 Query: 551 caaccgcgccaccgccgccgggttctggaaggccaccggccgggacaag 599 |||| | || ||| | ||||| || |||||||||||||| |||||||| Sbjct: 418 caacagggcgaccactgccggcttttggaaggccaccgggagggacaag 466 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagta 709 ||||||| |||||| || ||| |||| || ||||| |||||||||||||||||||| Sbjct: 515 ttctacaggggccgggctcccaacggacagaagtcggactggatcatgcacgagta 570 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaag 863 |||||||| || ||||| |||||||||||||||||||| Sbjct: 675 caggaggaaggatgggtggtctgcagggtgttcaagaag 713
>ref|NM_001059847.1| Oryza sativa (japonica cultivar-group) Os04g0515900 (Os04g0515900) mRNA, complete cds Length = 1287 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 496 tcggcatgcggaagacgctcgtcttctaccagggccgcgcccccaacggcgtcaagtccg 555 Query: 691 actggatcatgcacgagtaccgcctcgac 719 |||| |||||||||||| |||||||||| Sbjct: 556 gctgggtcatgcacgagttccgcctcgac 584
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 25748717 tcggcatgcggaagacgctcgtcttctaccagggccgcgcccccaacggcgtcaagtccg 25748776 Query: 691 actggatcatgcacgagtaccgcctcgac 719 |||| |||||||||||| |||||||||| Sbjct: 25748777 gctgggtcatgcacgagttccgcctcgac 25748805 Score = 113 bits (57), Expect = 2e-21 Identities = 96/109 (88%) Strand = Plus / Minus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcac 550 ||||||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 26778772 gcagaacgagtggtacttcttcagccacaaggacaagaagtacccgacgggcacacgcac 26778713 Query: 551 caaccgcgccaccgccgccgggttctggaaggccaccggccgggacaag 599 |||| | || ||| | ||||| || |||||||||||||| |||||||| Sbjct: 26778712 caacagggcgaccactgccggcttttggaaggccaccgggagggacaag 26778664 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Minus Query: 630 atcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtcc 689 ||||||||| | |||||||||||||||||| |||||||| ||| ||||| |||| || Sbjct: 35394243 atcggcatgaggaagacgctcgtcttctaccgcggccgcgcgcccaacggctgcaagacc 35394184 Query: 690 gactggatcatgcacgagtaccgcctcg 717 ||||||||||| |||||||||||||||| Sbjct: 35394183 gactggatcatccacgagtaccgcctcg 35394156 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 536 gacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccggga 595 |||||| ||||| |||||||||||||| || || || |||||||||||||| ||||| || Sbjct: 35394349 gacggggacgcggaccaaccgcgccacggcggcgggcttctggaaggccacgggccgtga 35394290 Query: 596 caag 599 |||| Sbjct: 35394289 caag 35394286 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 22969755 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 22969810 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagta 709 ||||||| |||||| || ||| |||| || ||||| |||||||||||||||||||| Sbjct: 26778615 ttctacaggggccgggctcccaacggacagaagtcggactggatcatgcacgagta 26778560 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 22970180 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 22970239 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 22970240 cacgagtaccgcctc 22970254 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 545 gcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 31476275 gcgcaccaaccgcgccacccgctccggctactggaaggccaccggc 31476230 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||||||| || | ||| |||||||| Sbjct: 31477248 tgccgccggggttccggttccaccccagggacgaggagct 31477209 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Minus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaag 863 |||||||| || ||||| |||||||||||||||||||| Sbjct: 26778455 caggaggaaggatgggtggtctgcagggtgttcaagaag 26778417 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Minus Query: 328 cgccggggttccggttccatccgacggaggagga 361 ||||||| ||| ||||||| |||||||||||||| Sbjct: 35394560 cgccgggattcaggttccacccgacggaggagga 35394527 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 22970045 tggtacttcttctgcctcaaggacaggaagtacccgacggg 22970085 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 425 cgacgtcgacctcaacaagctcgagccatggga 457 ||||||||||||||||||| |||||| ||||| Sbjct: 31477142 cgacgtcgacctcaacaagtgcgagccgtggga 31477110
>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11, complete sequence Length = 113677 Score = 113 bits (57), Expect = 2e-21 Identities = 96/109 (88%) Strand = Plus / Plus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcac 550 ||||||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 4423 gcagaacgagtggtacttcttcagccacaaggacaagaagtacccgacgggcacacgcac 4482 Query: 551 caaccgcgccaccgccgccgggttctggaaggccaccggccgggacaag 599 |||| | || ||| | ||||| || |||||||||||||| |||||||| Sbjct: 4483 caacagggcgaccactgccggcttttggaaggccaccgggagggacaag 4531 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagta 709 ||||||| |||||| || ||| |||| || ||||| |||||||||||||||||||| Sbjct: 4580 ttctacaggggccgggctcccaacggacagaagtcggactggatcatgcacgagta 4635 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaag 863 |||||||| || ||||| |||||||||||||||||||| Sbjct: 4740 caggaggaaggatgggtggtctgcagggtgttcaagaag 4778
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16, complete sequence Length = 130718 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 128444 tcggcatgcggaagacgctcgtcttctaccagggccgcgcccccaacggcgtcaagtccg 128503 Query: 691 actggatcatgcacgagtaccgcctcgac 719 |||| |||||||||||| |||||||||| Sbjct: 128504 gctgggtcatgcacgagttccgcctcgac 128532
>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_H11 Length = 143314 Score = 113 bits (57), Expect = 2e-21 Identities = 102/117 (87%) Strand = Plus / Minus Query: 492 cagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcacc 551 ||||| ||||||||| | ||||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 30537 cagaatgactggtacttcttcagccacaaagacaaaaagtacccgacgggcacccgcacc 30478 Query: 552 aaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatctac 608 ||||| ||||| | |||||| ||||||||||| || || |||||||| |||||||| Sbjct: 30477 aaccgggccacgggcgccggcttctggaaggcgacggggagggacaagcccatctac 30421 Score = 105 bits (53), Expect = 6e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||| |||||||||||||||||||| |||||| | ||||| ||||| |||||||||||| Sbjct: 30393 aagacactcgtcttctacaagggccgtgcccccaatggccagaagtcggactggatcatg 30334 Query: 702 cacgagtaccgcctcga 718 ||||||||||||||||| Sbjct: 30333 cacgagtaccgcctcga 30317
>dbj|AK109552.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A06, full insert sequence Length = 1418 Score = 113 bits (57), Expect = 2e-21 Identities = 96/109 (88%) Strand = Plus / Plus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcac 550 ||||||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 358 gcagaacgagtggtacttcttcagccacaaggacaagaagtacccgacgggcacacgcac 417 Query: 551 caaccgcgccaccgccgccgggttctggaaggccaccggccgggacaag 599 |||| | || ||| | ||||| || |||||||||||||| |||||||| Sbjct: 418 caacagggcgaccactgccggcttttggaaggccaccgggagggacaag 466 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 654 ttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacgagta 709 ||||||| |||||| || ||| |||| || ||||| |||||||||||||||||||| Sbjct: 515 ttctacaggggccgggctcccaacggacagaagtcggactggatcatgcacgagta 570 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 825 caggaggacgggtgggtcatctgcagggtgttcaagaag 863 |||||||| || ||||| |||||||||||||||||||| Sbjct: 675 caggaggaaggatgggtggtctgcagggtgttcaagaag 713
>dbj|AK062955.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-C12, full insert sequence Length = 1288 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 497 tcggcatgcggaagacgctcgtcttctaccagggccgcgcccccaacggcgtcaagtccg 556 Query: 691 actggatcatgcacgagtaccgcctcgac 719 |||| |||||||||||| |||||||||| Sbjct: 557 gctgggtcatgcacgagttccgcctcgac 585
>emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072M01, complete sequence Length = 127712 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 71643 tcggcatgcggaagacgctcgtcttctaccagggccgcgcccccaacggcgtcaagtccg 71702 Query: 691 actggatcatgcacgagtaccgcctcgac 719 |||| |||||||||||| |||||||||| Sbjct: 71703 gctgggtcatgcacgagttccgcctcgac 71731
>ref|NM_001071680.1| Oryza sativa (japonica cultivar-group) Os10g0532000 (Os10g0532000) mRNA, complete cds Length = 1346 Score = 109 bits (55), Expect = 4e-20 Identities = 142/171 (83%) Strand = Plus / Plus Query: 371 ctactacctcgccaagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgt 430 |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 223 ctactacctccggaagaaggtggcctcgcagaagatcgacctcgacgtcatccgcgacgt 282 Query: 431 cgacctcaacaagctcgagccatgggacatccaagagcggtgcaggatcggcaccggccc 490 ||||||| || ||||||||||||| ||||||||| |||||||| || || Sbjct: 283 cgacctctaccgcatcgagccatgggatctccaagagcattgcaggatagggtacgagga 342 Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacggg 541 ||||| ||| |||||| | |||||| ||||||||| ||||||||||||||| Sbjct: 343 gcagagcgagtggtacttcttcagctacaaggacaggaagtacccgacggg 393 Score = 99.6 bits (50), Expect = 4e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||| ||| | |||||||||||||||||||||||| | || ||| ||||||||||| | Sbjct: 475 catcgggatgaggaagacgctcgtcttctacaagggcagggcacccaacggccacaagac 534 Query: 689 cgactggatcatgcacgagtaccgcctcga 718 |||||||||| | ||||||||||||||||| Sbjct: 535 cgactggatcgtccacgagtaccgcctcga 564
>dbj|AK106313.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D07, full insert sequence Length = 1346 Score = 109 bits (55), Expect = 4e-20 Identities = 142/171 (83%) Strand = Plus / Plus Query: 371 ctactacctcgccaagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgt 430 |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 223 ctactacctccggaagaaggtggcctcgcagaagatcgacctcgacgtcatccgcgacgt 282 Query: 431 cgacctcaacaagctcgagccatgggacatccaagagcggtgcaggatcggcaccggccc 490 ||||||| || ||||||||||||| ||||||||| |||||||| || || Sbjct: 283 cgacctctaccgcatcgagccatgggatctccaagagcattgcaggatagggtacgagga 342 Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacggg 541 ||||| ||| |||||| | |||||| ||||||||| ||||||||||||||| Sbjct: 343 gcagagcgagtggtacttcttcagctacaaggacaggaagtacccgacggg 393 Score = 91.7 bits (46), Expect = 9e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||| ||| | |||||||||||||||||||||||| | || ||| ||||||||||| | Sbjct: 475 catcgggatgaggaagacgctcgtcttctacaagggcagggcacccaacggccacaagac 534 Query: 689 cgactggatcatgcacgagtaccgcctcga 718 ||||||||| | ||||||||||||||||| Sbjct: 535 cgactggattgtccacgagtaccgcctcga 564
>ref|NM_001067310.1| Oryza sativa (japonica cultivar-group) Os08g0103900 (Os08g0103900) mRNA, complete cds Length = 1753 Score = 101 bits (51), Expect = 9e-18 Identities = 126/151 (83%) Strand = Plus / Plus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 ||||||||||||||| |||| || |||||||||||||||||| | ||||||||||||| Sbjct: 359 gtgccgccggggttcaggtttcacccgacggaggaggagctggtgggctactacctcgcc 418 Query: 384 aagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaag 443 | |||||||||||| ||| |||||| |||||| |||||| || |||| ||| ||| | Sbjct: 419 aggaaggtggcctcccagaagatcgatctcgacatcatccaggagctcgatctctacagg 478 Query: 444 ctcgagccatgggacatccaagagcggtgca 474 ||||||||||||| | |||||||| |||| Sbjct: 479 atcgagccatgggatctgcaagagcgttgca 509 Score = 85.7 bits (43), Expect = 5e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||| || ||||||||||| ||||||||| |||||| ||| ||||||||||||| Sbjct: 686 aagacgctggtgttctacaagggtcgcgcccccaacggccggaagaccgactggatcatc 745 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 746 cacgagtaccgcctc 760 Score = 61.9 bits (31), Expect = 8e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 549 accaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaag 599 |||||||||||||| || || || |||||||||||||||||||| |||||| Sbjct: 593 accaaccgcgccacggcggcgggcttctggaaggccaccggccgcgacaag 643
>dbj|AK110611.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-H04, full insert sequence Length = 1753 Score = 101 bits (51), Expect = 9e-18 Identities = 126/151 (83%) Strand = Plus / Plus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 ||||||||||||||| |||| || |||||||||||||||||| | ||||||||||||| Sbjct: 359 gtgccgccggggttcaggtttcacccgacggaggaggagctggtgggctactacctcgcc 418 Query: 384 aagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaag 443 | |||||||||||| ||| |||||| |||||| |||||| || |||| ||| ||| | Sbjct: 419 aggaaggtggcctcccagaagatcgatctcgacatcatccaggagctcgatctctacagg 478 Query: 444 ctcgagccatgggacatccaagagcggtgca 474 ||||||||||||| | |||||||| |||| Sbjct: 479 atcgagccatgggatctgcaagagcgttgca 509 Score = 85.7 bits (43), Expect = 5e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||| || ||||||||||| ||||||||| |||||| ||| ||||||||||||| Sbjct: 686 aagacgctggtgttctacaagggtcgcgcccccaacggccggaagaccgactggatcatc 745 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 746 cacgagtaccgcctc 760 Score = 61.9 bits (31), Expect = 8e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 549 accaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaag 599 |||||||||||||| || || || |||||||||||||||||||| |||||| Sbjct: 593 accaaccgcgccacggcggcgggcttctggaaggccaccggccgcgacaag 643
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 99.6 bits (50), Expect = 4e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||| ||| | |||||||||||||||||||||||| | || ||| ||||||||||| | Sbjct: 9326 catcgggatgaggaagacgctcgtcttctacaagggcagggcacccaacggccacaagac 9267 Query: 689 cgactggatcatgcacgagtaccgcctcga 718 |||||||||| | ||||||||||||||||| Sbjct: 9266 cgactggatcgtccacgagtaccgcctcga 9237 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 371 ctactacctcgccaagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgt 430 |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 9692 ctactacctccggaagaaggtggcctcgcagaagatcgacctcgacgtcatccgcgacgt 9633 Query: 431 cgacctc 437 ||||||| Sbjct: 9632 cgacctc 9626 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Minus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacggg 541 ||||| ||| |||||| | |||||| ||||||||| ||||||||||||||| Sbjct: 9458 gcagagcgagtggtacttcttcagctacaaggacaggaagtacccgacggg 9408
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 99.6 bits (50), Expect = 4e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||| ||| | |||||||||||||||||||||||| | || ||| ||||||||||| | Sbjct: 34900 catcgggatgaggaagacgctcgtcttctacaagggcagggcacccaacggccacaagac 34959 Query: 689 cgactggatcatgcacgagtaccgcctcga 718 |||||||||| | ||||||||||||||||| Sbjct: 34960 cgactggatcgtccacgagtaccgcctcga 34989 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 371 ctactacctcgccaagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgt 430 |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 34534 ctactacctccggaagaaggtggcctcgcagaagatcgacctcgacgtcatccgcgacgt 34593 Query: 431 cgacctc 437 ||||||| Sbjct: 34594 cgacctc 34600 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacggg 541 ||||| ||| |||||| | |||||| ||||||||| ||||||||||||||| Sbjct: 34768 gcagagcgagtggtacttcttcagctacaaggacaggaagtacccgacggg 34818
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 99.6 bits (50), Expect = 4e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||| ||| | |||||||||||||||||||||||| | || ||| ||||||||||| | Sbjct: 20157165 catcgggatgaggaagacgctcgtcttctacaagggcagggcacccaacggccacaagac 20157224 Query: 689 cgactggatcatgcacgagtaccgcctcga 718 |||||||||| | ||||||||||||||||| Sbjct: 20157225 cgactggatcgtccacgagtaccgcctcga 20157254 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 371 ctactacctcgccaagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgt 430 |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 20156799 ctactacctccggaagaaggtggcctcgcagaagatcgacctcgacgtcatccgcgacgt 20156858 Query: 431 cgacctc 437 ||||||| Sbjct: 20156859 cgacctc 20156865 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 639 cgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatc 698 |||||||||||||||||||||||||| ||||| ||| |||| | |||||||| || Sbjct: 22150777 cgcaagacgctcgtcttctacaagggtcgcgctcccggcggcgagcgcaccgactgggtc 22150836 Query: 699 atgcacgagtaccgcctc 716 |||||||||||||||||| Sbjct: 22150837 atgcacgagtaccgcctc 22150854 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 491 gcagaacgactggtacctgttcagccacaaggacaagaagtacccgacggg 541 ||||| ||| |||||| | |||||| ||||||||| ||||||||||||||| Sbjct: 20157033 gcagagcgagtggtacttcttcagctacaaggacaggaagtacccgacggg 20157083
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 99.6 bits (50), Expect = 4e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 ||||||||||||||| |||| || |||||||||||||||||| | ||||||||||||| Sbjct: 121041 gtgccgccggggttcaggtttcacccgacggaggaggagctggtgggctactacctcgcc 120982 Query: 384 aagaaggtggcctcgcagcggatcgacctcgacgtcatccccgacgtcgacctcaacaag 443 | |||||||||||| ||| |||||| |||||| |||||| || |||| ||| ||| | Sbjct: 120981 aggaaggtggcctcccagaagatcgatctcgacatcatccaggagctcgatctctacagg 120922 Query: 444 ctcgagccatggga 457 ||||||||||||| Sbjct: 120921 atcgagccatggga 120908 Score = 85.7 bits (43), Expect = 5e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||| || ||||||||||| ||||||||| |||||| ||| ||||||||||||| Sbjct: 120590 aagacgctggtgttctacaagggtcgcgcccccaacggccggaagaccgactggatcatc 120531 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 120530 cacgagtaccgcctc 120516 Score = 61.9 bits (31), Expect = 8e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 549 accaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaag 599 |||||||||||||| || || || |||||||||||||||||||| |||||| Sbjct: 120683 accaaccgcgccacggcggcgggcttctggaaggccaccggccgcgacaag 120633
>ref|NM_001067748.1| Oryza sativa (japonica cultivar-group) Os08g0200600 (Os08g0200600) mRNA, complete cds Length = 1311 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 ||||||||||||||||||||||||||||| |||||||||||| | |||| |||| ||| Sbjct: 472 tcggcatgcgcaagacgctcgtcttctaccgcggccgcgcccccaagggccgcaagaccg 531 Query: 691 actggatcatgcacgagtaccgcctcga 718 | ||| |||||||||||| ||| ||||| Sbjct: 532 agtgggtcatgcacgagttccggctcga 559 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||||||||||||| ||||||||||||| Sbjct: 242 cgacgtcgacctcaacaagtgcgagccatgggac 275 Score = 50.1 bits (25), Expect = 0.029 Identities = 40/45 (88%) Strand = Plus / Plus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 354 cgcaccaaccgcgccacccgctccggctactggaaggccaccggc 398 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||| ||| || |||||| Sbjct: 118 tgccgccggggttcaggttccacccgagggacgacgagctg 158
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Minus Query: 630 atcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtcc 689 ||||||||| | |||||||||||||||||| |||||||| ||| ||||| |||| || Sbjct: 25983 atcggcatgaggaagacgctcgtcttctaccgcggccgcgctcccaacggctgcaagacc 25924 Query: 690 gactggatcatgcacgagtaccgcctcg 717 ||||||||||| |||||||||||||||| Sbjct: 25923 gactggatcatccacgagtaccgcctcg 25896 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 536 gacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccggga 595 |||||| ||||| |||||||||||||| || || || |||||||||||||| ||||| || Sbjct: 26089 gacggggacgcggaccaaccgcgccacggcggcgggcttctggaaggccacgggccgtga 26030 Query: 596 caag 599 |||| Sbjct: 26029 caag 26026
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Minus Query: 630 atcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtcc 689 ||||||||| | |||||||||||||||||| |||||||| ||| ||||| |||| || Sbjct: 19046 atcggcatgaggaagacgctcgtcttctaccgcggccgcgcgcccaacggctgcaagacc 18987 Query: 690 gactggatcatgcacgagtaccgcctcg 717 ||||||||||| |||||||||||||||| Sbjct: 18986 gactggatcatccacgagtaccgcctcg 18959 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 536 gacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccggga 595 |||||| ||||| |||||||||||||| || || || |||||||||||||| ||||| || Sbjct: 19152 gacggggacgcggaccaaccgcgccacggcggcgggcttctggaaggccacgggccgtga 19093 Query: 596 caag 599 |||| Sbjct: 19092 caag 19089 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Minus Query: 328 cgccggggttccggttccatccgacggaggagga 361 ||||||| ||| ||||||| |||||||||||||| Sbjct: 19363 cgccgggattcaggttccacccgacggaggagga 19330
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073I05 Length = 182291 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Minus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 ||||||||||||||||||||||||||||| |||||||||||| | |||| |||| ||| Sbjct: 29918 tcggcatgcgcaagacgctcgtcttctaccgcggccgcgcccccaagggccgcaagaccg 29859 Query: 691 actggatcatgcacgagtaccgcctcga 718 | ||| |||||||||||| ||| ||||| Sbjct: 29858 agtgggtcatgcacgagttccggctcga 29831 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Minus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||||||||||||| ||||||||||||| Sbjct: 31172 cgacgtcgacctcaacaagtgcgagccatgggac 31139 Score = 50.1 bits (25), Expect = 0.029 Identities = 40/45 (88%) Strand = Plus / Minus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 30036 cgcaccaaccgcgccacccgctccggctactggaaggccaccggc 29992 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||| ||| || |||||| Sbjct: 31296 tgccgccggggttcaggttccacccgagggacgacgagctg 31256
>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0556A11 Length = 138096 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Minus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 ||||||||||||||||||||||||||||| |||||||||||| | |||| |||| ||| Sbjct: 96953 tcggcatgcgcaagacgctcgtcttctaccgcggccgcgcccccaagggccgcaagaccg 96894 Query: 691 actggatcatgcacgagtaccgcctcga 718 | ||| |||||||||||| ||| ||||| Sbjct: 96893 agtgggtcatgcacgagttccggctcga 96866 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Minus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||||||||||||| ||||||||||||| Sbjct: 98207 cgacgtcgacctcaacaagtgcgagccatgggac 98174 Score = 50.1 bits (25), Expect = 0.029 Identities = 40/45 (88%) Strand = Plus / Minus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 97071 cgcaccaaccgcgccacccgctccggctactggaaggccaccggc 97027 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||| ||| || |||||| Sbjct: 98331 tgccgccggggttcaggttccacccgagggacgacgagctg 98291
>dbj|AK120197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036M14, full insert sequence Length = 1313 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 ||||||||||||||||||||||||||||| |||||||||||| | |||| |||| ||| Sbjct: 474 tcggcatgcgcaagacgctcgtcttctaccgcggccgcgcccccaagggccgcaagaccg 533 Query: 691 actggatcatgcacgagtaccgcctcga 718 | ||| |||||||||||| ||| ||||| Sbjct: 534 agtgggtcatgcacgagttccggctcga 561 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||||||||||||| ||||||||||||| Sbjct: 244 cgacgtcgacctcaacaagtgcgagccatgggac 277 Score = 50.1 bits (25), Expect = 0.029 Identities = 40/45 (88%) Strand = Plus / Plus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 356 cgcaccaaccgcgccacccgctccggctactggaaggccaccggc 400 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||| ||| || |||||| Sbjct: 120 tgccgccggggttcaggttccacccgagggacgacgagctg 160
>emb|CT831910.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA022P22, full insert sequence Length = 1576 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||||||||| |||||||||||||| |||| | ||| || |||| ||||| Sbjct: 553 aagacgctcgtcttctacatgggccgcgccccccgcggcgagaagaccccctgggtcatg 612 Query: 702 cacgagtaccgcctcgacg 720 ||||| ||||||||||||| Sbjct: 613 cacgaataccgcctcgacg 631 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 |||||||||||||||||||||| || || || |||||| || | ||| |||||||| Sbjct: 248 tgccgccggggttccggttccaccccaccgacgaggaggtggtgacccactacctc 303
>ref|NM_001067206.1| Oryza sativa (japonica cultivar-group) Os07g0684800 (Os07g0684800) mRNA, complete cds Length = 1643 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||||||||| |||||||||||||| |||| | ||| || |||| ||||| Sbjct: 556 aagacgctcgtcttctacatgggccgcgccccccgcggcgagaagaccccctgggtcatg 615 Query: 702 cacgagtaccgcctcgacg 720 ||||| ||||||||||||| Sbjct: 616 cacgaataccgcctcgacg 634 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 |||||||||||||||||||||| || || || |||||| || | ||| |||||||| Sbjct: 251 tgccgccggggttccggttccaccccaccgacgaggaggtggtgacccactacctc 306
>ref|NM_001064113.1| Oryza sativa (japonica cultivar-group) Os06g0344900 (Os06g0344900) mRNA, complete cds Length = 1122 Score = 85.7 bits (43), Expect = 5e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| Sbjct: 68 tgccgccggggttccggttccacccgacggacgaggagctgatcacctactacct 122 Score = 69.9 bits (35), Expect = 3e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||| |||||||||||| |||||||||||| | ||||| ||| || | ||| ||||| Sbjct: 376 aagaccctcgtcttctaccgcggccgcgcccccaagggccagaagacccagtgggtcatg 435 Query: 702 cacgagtaccgcctcgacg 720 ||||||||||||||||||| Sbjct: 436 cacgagtaccgcctcgacg 454 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||||||||| | |||||| | |||||||||||||||| Sbjct: 280 cgcaccaaccgcgccacgggcgccggctactggaaggccaccggc 324
>gb|DQ226510.1| Thellungiella halophila clone ThBAC2 hypothetical protein genes, complete cds; transposon En/Spm, complete sequence; transposon Gypsy, complete sequence; and transposon AC-like element, complete sequence Length = 82919 Score = 85.7 bits (43), Expect = 5e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 492 cagaacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcacc 551 ||||| || |||||| | ||||||||||| ||||||||||| ||||| || ||| | || Sbjct: 45846 cagaaggagtggtacttcttcagccacaaagacaagaagtatccgacagggacgaggact 45905 Query: 552 aaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggcc 602 ||||| ||||||| ||||| |||||||| ||||| ||||||||||||||| Sbjct: 45906 aaccgagccaccgtggccggtttctggaaagccacgggccgggacaaggcc 45956
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||||||||| |||||||||||||| |||| | ||| || |||| ||||| Sbjct: 28988067 aagacgctcgtcttctacatgggccgcgccccccgcggcgagaagaccccctgggtcatg 28988008 Query: 702 cacgagtaccgcctcgacg 720 ||||| ||||||||||||| Sbjct: 28988007 cacgaataccgcctcgacg 28987989 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 22703808 tgccgccggggttccggttccacccgacggacgaggagctg 22703768 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 28932362 tgccgccggggttccggttccacccgacggacgaggagctg 28932402 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgcctcg 717 |||||||||||||||||||||||||| Sbjct: 28932800 ctggatcatgcacgagtaccgcctcg 28932825 Score = 50.1 bits (25), Expect = 0.029 Identities = 25/25 (100%) Strand = Plus / Plus Query: 693 tggatcatgcacgagtaccgcctcg 717 ||||||||||||||||||||||||| Sbjct: 7000616 tggatcatgcacgagtaccgcctcg 7000640 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 |||||||||||||||||||||| || || || |||||| || | ||| |||||||| Sbjct: 28988469 tgccgccggggttccggttccaccccaccgacgaggaggtggtgacccactacctc 28988414 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccg 712 |||||||||||||||||||||| Sbjct: 22703213 actggatcatgcacgagtaccg 22703192 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||| ||||| | || | |||||||||||||||| Sbjct: 7000479 ccaaccgcgccgccgcctcgggctactggaaggccaccggc 7000519 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 418 tcatccccgacgtcgacctcaacaagctcgagccatgggac 458 ||||| ||||||||||| || ||||| |||| ||||||||| Sbjct: 28932455 tcatcgccgacgtcgacatctacaagttcgatccatgggac 28932495
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||||||||| |||||||||||||| |||| | ||| || |||| ||||| Sbjct: 105604 aagacgctcgtcttctacatgggccgcgccccccgcggcgagaagaccccctgggtcatg 105545 Query: 702 cacgagtaccgcctcgacg 720 ||||| ||||||||||||| Sbjct: 105544 cacgaataccgcctcgacg 105526 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 49899 tgccgccggggttccggttccacccgacggacgaggagctg 49939 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgcctcg 717 |||||||||||||||||||||||||| Sbjct: 50337 ctggatcatgcacgagtaccgcctcg 50362 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 |||||||||||||||||||||| || || || |||||| || | ||| |||||||| Sbjct: 106006 tgccgccggggttccggttccaccccaccgacgaggaggtggtgacccactacctc 105951 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 418 tcatccccgacgtcgacctcaacaagctcgagccatgggac 458 ||||| ||||||||||| || ||||| |||| ||||||||| Sbjct: 49992 tcatcgccgacgtcgacatctacaagttcgatccatgggac 50032
>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021N09 Length = 156565 Score = 85.7 bits (43), Expect = 5e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| Sbjct: 54214 tgccgccggggttccggttccacccgacggacgaggagctgatcacctactacct 54268 Score = 69.9 bits (35), Expect = 3e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||| |||||||||||| |||||||||||| | ||||| ||| || | ||| ||||| Sbjct: 54522 aagaccctcgtcttctaccgcggccgcgcccccaagggccagaagacccagtgggtcatg 54581 Query: 702 cacgagtaccgcctcgacg 720 ||||||||||||||||||| Sbjct: 54582 cacgagtaccgcctcgacg 54600 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||||||||| | |||||| | |||||||||||||||| Sbjct: 54426 cgcaccaaccgcgccacgggcgccggctactggaaggccaccggc 54470
>dbj|AK105645.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F06, full insert sequence Length = 1475 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||||||||| |||||||||||||| |||| | ||| || |||| ||||| Sbjct: 386 aagacgctcgtcttctacatgggccgcgccccccgcggcgagaagaccccctgggtcatg 445 Query: 702 cacgagtaccgcctcgacg 720 ||||| ||||||||||||| Sbjct: 446 cacgaataccgcctcgacg 464 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 |||||||||||||||||||||| || || || |||||| || | ||| |||||||| Sbjct: 81 tgccgccggggttccggttccaccccaccgacgaggaggtggtgacccactacctc 136
>dbj|AK073876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072L16, full insert sequence Length = 1644 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||||||||| |||||||||||||| |||| | ||| || |||| ||||| Sbjct: 557 aagacgctcgtcttctacatgggccgcgccccccgcggcgagaagaccccctgggtcatg 616 Query: 702 cacgagtaccgcctcgacg 720 ||||| ||||||||||||| Sbjct: 617 cacgaataccgcctcgacg 635 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 |||||||||||||||||||||| || || || |||||| || | ||| |||||||| Sbjct: 252 tgccgccggggttccggttccaccccaccgacgaggaggtggtgacccactacctc 307
>ref|NM_001055366.1| Oryza sativa (japonica cultivar-group) Os03g0127200 (Os03g0127200) mRNA, complete cds Length = 1101 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| | ||||| ||||||||||| |||||| | || || | ||||| ||| | Sbjct: 312 catcggcatgaggaagacactcgtcttctataagggcagggcgcctaatggccagaagac 371 Query: 689 cgactggatcatgcacgagtaccgcctcga 718 |||||||||||||||||||||||||||||| Sbjct: 372 cgactggatcatgcacgagtaccgcctcga 401 Score = 65.9 bits (33), Expect = 5e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 333 gggttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggtg 392 |||||| ||||||| || || || |||||||| || |||||||||| ||||||||| Sbjct: 22 gggttcaggttccaccccaccgacgaggagctcgtcggctactacctccgcaagaaggtc 81 Query: 393 gcctcgcagcggatcgacctcgacgtcatccccgacgtcga 433 ||||| ||| |||||||||||||||||||| |||| |||| Sbjct: 82 gcctcccagaagatcgacctcgacgtcatccgcgacatcga 122 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | |||||| ||||||||| ||||||||||||||| Sbjct: 190 tggtacttcttcagctacaaggacaggaagtacccgacggg 230
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07, complete sequence Length = 117612 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Minus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| | ||||| ||||||||||| |||||| | || || | ||||| ||| | Sbjct: 48072 catcggcatgaggaagacactcgtcttctataagggcagggcgcctaatggccagaagac 48013 Query: 689 cgactggatcatgcacgagtaccgcctcga 718 |||||||||||||||||||||||||||||| Sbjct: 48012 cgactggatcatgcacgagtaccgcctcga 47983 Score = 65.9 bits (33), Expect = 5e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 333 gggttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggtg 392 |||||| ||||||| || || || |||||||| || |||||||||| ||||||||| Sbjct: 48459 gggttcaggttccaccccaccgacgaggagctcgtcggctactacctccgcaagaaggtc 48400 Query: 393 gcctcgcagcggatcgacctcgacgtcatccccgacgtcga 433 ||||| ||| |||||||||||||||||||| |||| |||| Sbjct: 48399 gcctcccagaagatcgacctcgacgtcatccgcgacatcga 48359 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Minus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | |||||| ||||||||| ||||||||||||||| Sbjct: 48194 tggtacttcttcagctacaaggacaggaagtacccgacggg 48154
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Minus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| | ||||| ||||||||||| |||||| | || || | ||||| ||| | Sbjct: 1510897 catcggcatgaggaagacactcgtcttctataagggcagggcgcctaatggccagaagac 1510838 Query: 689 cgactggatcatgcacgagtaccgcctcga 718 |||||||||||||||||||||||||||||| Sbjct: 1510837 cgactggatcatgcacgagtaccgcctcga 1510808 Score = 79.8 bits (40), Expect = 3e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 646 cgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacg 705 ||||||||||||||||||||||| | ||| | ||| |||| || ||||||||||||||| Sbjct: 11945658 cgctcgtcttctacaagggccgcccgcccaagggcaccaagaccaactggatcatgcacg 11945599 Query: 706 agtaccgcctcg 717 |||||||||||| Sbjct: 11945598 agtaccgcctcg 11945587 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 |||||||||||||||||||||| |||||||| ||||||||| | || |||||||||||| Sbjct: 23535264 tgccgccggggttccggttccacccgacggacgaggagctggtgacgtactacctcgcc 23535322 Score = 69.9 bits (35), Expect = 3e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||||||||||||| |||| |||||||| | |||| |||| | |||||| ||||| Sbjct: 1844107 aagacgctcgtcttctaccagggtcgcgccccgcgcggcaccaagacggactgggtcatg 1844048 Query: 702 cacgagtaccgcctc 716 |||||||||||||| Sbjct: 1844047 aacgagtaccgcctc 1844033 Score = 65.9 bits (33), Expect = 5e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 333 gggttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggtg 392 |||||| ||||||| || || || |||||||| || |||||||||| ||||||||| Sbjct: 1511284 gggttcaggttccaccccaccgacgaggagctcgtcggctactacctccgcaagaaggtc 1511225 Query: 393 gcctcgcagcggatcgacctcgacgtcatccccgacgtcga 433 ||||| ||| |||||||||||||||||||| |||| |||| Sbjct: 1511224 gcctcccagaagatcgacctcgacgtcatccgcgacatcga 1511184 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 11946073 tgccgccggggttccggttccacccgacggacgaggagctg 11946033 Score = 58.0 bits (29), Expect = 1e-04 Identities = 62/73 (84%) Strand = Plus / Plus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||||||||| | ||||||||||||||||| | | |||| | ||||||| ||||| Sbjct: 23536096 aagtacccgacggggatccgcaccaaccgcgccacggactccggctactggaagaccacc 23536155 Query: 588 ggccgggacaagg 600 ||| |||||||| Sbjct: 23536156 ggcaaggacaagg 23536168 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 419 catccccgacgtcgacctcaacaagctcgagccatgggac 458 |||| |||||||||||||||||||| ||||||||||||| Sbjct: 23535358 catcgccgacgtcgacctcaacaagtgcgagccatgggac 23535397 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 666 cgcgccccccacggccacaagtccgactggatcatgcacgagtaccgcctc 716 ||||||||| |||||| |||| ||| |||| |||||||||||| ||||||| Sbjct: 502947 cgcgcccccaacggccgcaagaccgcctgggtcatgcacgagttccgcctc 502997 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Minus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | |||||| ||||||||| ||||||||||||||| Sbjct: 1511019 tggtacttcttcagctacaaggacaggaagtacccgacggg 1510979 Score = 50.1 bits (25), Expect = 0.029 Identities = 64/77 (83%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||||||||||||| |||||||| |||| ||| | ||| ||| |||| | ||| Sbjct: 11908716 aagacgctcgtcttctacctcggccgcgcgccccgtggcgagaagaccggctgggtgatg 11908657 Query: 702 cacgagtaccgcctcga 718 ||||||| ||||||||| Sbjct: 11908656 cacgagttccgcctcga 11908640 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Minus Query: 416 cgtcatccccgacgtcgacctcaacaagctcgagccatgg 455 ||||||| ||||||||||||||||||| |||||||||| Sbjct: 11909030 cgtcatcggcgacgtcgacctcaacaagtgcgagccatgg 11908991 Score = 46.1 bits (23), Expect = 0.46 Identities = 29/31 (93%) Strand = Plus / Plus Query: 688 ccgactggatcatgcacgagtaccgcctcga 718 |||| ||| |||||||||||||||||||||| Sbjct: 1070996 ccgattgggtcatgcacgagtaccgcctcga 1071026 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| || ||||| || |||||| Sbjct: 33952814 tgccgccggggttcaggttccaccccacggacgacgagctg 33952854 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||| ||| | ||||| |||||||||||||||| Sbjct: 33953030 ccaaccgcgccgccggcaacgggtactggaaggccaccggc 33953070
>ref|NM_001065163.1| Oryza sativa (japonica cultivar-group) Os06g0726300 (Os06g0726300) mRNA, complete cds Length = 879 Score = 81.8 bits (41), Expect = 8e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||| |||| ||||||||||||| | |||| |||| |||||||| ||||| Sbjct: 379 aagacgctcgtctactacgagggccgcgcccctcgcggcaccaagaccgactgggtcatg 438 Query: 702 cacgagtaccgcctcgacgacgccg 726 |||||||||||||| |||||||| Sbjct: 439 aacgagtaccgcctccccgacgccg 463 Score = 61.9 bits (31), Expect = 8e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 329 gccggggttccggttccatccgacggaggaggagctgct 367 |||||| ||| |||||||||||||||||||||||||||| Sbjct: 60 gccgggattcaggttccatccgacggaggaggagctgct 98
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 81.8 bits (41), Expect = 8e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||| |||| ||||||||||||| | |||| |||| |||||||| ||||| Sbjct: 15605 aagacgctcgtctactacgagggccgcgcccctcgcggcaccaagaccgactgggtcatg 15546 Query: 702 cacgagtaccgcctcgacgacgccg 726 |||||||||||||| |||||||| Sbjct: 15545 aacgagtaccgcctccccgacgccg 15521 Score = 61.9 bits (31), Expect = 8e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 329 gccggggttccggttccatccgacggaggaggagctgct 367 |||||| ||| |||||||||||||||||||||||||||| Sbjct: 15924 gccgggattcaggttccatccgacggaggaggagctgct 15886
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 81.8 bits (41), Expect = 8e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||||| |||| ||||||||||||| | |||| |||| |||||||| ||||| Sbjct: 124839 aagacgctcgtctactacgagggccgcgcccctcgcggcaccaagaccgactgggtcatg 124780 Query: 702 cacgagtaccgcctcgacgacgccg 726 |||||||||||||| |||||||| Sbjct: 124779 aacgagtaccgcctccccgacgccg 124755 Score = 61.9 bits (31), Expect = 8e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 329 gccggggttccggttccatccgacggaggaggagctgct 367 |||||| ||| |||||||||||||||||||||||||||| Sbjct: 125158 gccgggattcaggttccatccgacggaggaggagctgct 125120
>dbj|AK243514.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100075D15, full insert sequence Length = 1783 Score = 79.8 bits (40), Expect = 3e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 646 cgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacg 705 ||||||||||||||||||||||| | ||| | ||| |||| || ||||||||||||||| Sbjct: 518 cgctcgtcttctacaagggccgcccgcccaagggcaccaagaccaactggatcatgcacg 577 Query: 706 agtaccgcctcg 717 |||||||||||| Sbjct: 578 agtaccgcctcg 589 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 197 tgccgccggggttccggttccacccgacggacgaggagctg 237
>ref|NM_001068747.1| Oryza sativa (japonica cultivar-group) Os08g0511200 (Os08g0511200) mRNA, complete cds Length = 3531 Score = 79.8 bits (40), Expect = 3e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||||||||||| | |||| | ||| | Sbjct: 2886 catcggcatgaagaagacgctcgtcttctacaagggccgcgccccgcgcggcgagaagac 2945 Query: 689 cgactggatcatgcacgagtaccgcctcgacg 720 | | ||| || | ||||||||||||||||||| Sbjct: 2946 caagtgggtcctccacgagtaccgcctcgacg 2977 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Plus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 2779 aagtacccgacggggctgcgcaccaaccgcgccaccggcgccggctactggaaggccacc 2838 Query: 588 ggc 590 ||| Sbjct: 2839 ggc 2841 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 |||||||||||||| ||||||| || || || |||||||| |||||| |||||||||| Sbjct: 2582 tgccgccggggttcaggttccaccccaccgacgaggagctcgtcaccttctacctcgcc 2640
>ref|NM_001056532.1| Oryza sativa (japonica cultivar-group) Os03g0327800 (Os03g0327800) mRNA, complete cds Length = 1179 Score = 79.8 bits (40), Expect = 3e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 646 cgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacg 705 ||||||||||||||||||||||| | ||| | ||| |||| || ||||||||||||||| Sbjct: 347 cgctcgtcttctacaagggccgcccgcccaagggcaccaagaccaactggatcatgcacg 406 Query: 706 agtaccgcctcg 717 |||||||||||| Sbjct: 407 agtaccgcctcg 418 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 26 tgccgccggggttccggttccacccgacggacgaggagctg 66
>emb|AJ833967.1| Zea mays partial mRNA for hypothetical protein (nam2 gene) Length = 1331 Score = 79.8 bits (40), Expect = 3e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 |||||||||||||||| ||||| |||||||| ||||||||| |||||||||||||| Sbjct: 38 tgccgccggggttccgcttccacccgacggacgaggagctgatcacctactacctc 93 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Plus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 ||||||||||||||| |||||||||||||||||| || ||||| | ||||||||||||| Sbjct: 235 aagtacccgacgggcctgcgcaccaaccgcgccacggcggccggctactggaaggccacc 294 Query: 588 ggc 590 ||| Sbjct: 295 ggc 297 Score = 69.9 bits (35), Expect = 3e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||||||||||||| ||||||||||||| ||||| ||| | |||| ||||| Sbjct: 349 aagacgctcgtcttctaccggggccgcgcccccaggggccagaagacgcgctgggtcatg 408 Query: 702 cacgagtaccgcctcgacg 720 ||||||||||||||||||| Sbjct: 409 cacgagtaccgcctcgacg 427
>emb|AJ833966.1| Zea mays partial mRNA for hypothetical protein (nam1 gene) Length = 1259 Score = 79.8 bits (40), Expect = 3e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 |||||||||||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 44 tgccgccggggttccggttccacccgacggacgaggagctcatcacctactacctc 99 Score = 69.9 bits (35), Expect = 3e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 ||||||||||||||| |||||||||||||||||| | ||||| | ||||||||||||| Sbjct: 238 aagtacccgacgggcctgcgcaccaaccgcgccacggtggccggctactggaaggccacc 297 Query: 588 ggc 590 ||| Sbjct: 298 ggc 300 Score = 65.9 bits (33), Expect = 5e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||||||||||||| |||||||||||| | || || ||| | ||||| ||||| Sbjct: 352 aagacgctcgtcttctaccgcggccgcgcccccaagggacagaagacgcactgggtcatg 411 Query: 702 cacgagtaccgcctcga 718 ||||||||||||||||| Sbjct: 412 cacgagtaccgcctcga 428
>emb|AJ833965.1| Zea mays partial mRNA for hypothetical protein (nac6 gene) Length = 1283 Score = 79.8 bits (40), Expect = 3e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 495 aacgactggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaac 554 ||||| |||||| | |||||||||||||||||||||||| | ||||| ||| | || ||| Sbjct: 199 aacgagtggtacttcttcagccacaaggacaagaagtactcaacgggaacgagaacgaac 258 Query: 555 cgcgccaccgccgccgggttctggaaggccaccggccgggacaaggccatct 606 || ||||| | || || ||||||||||| || ||||| ||||||||||||| Sbjct: 259 cgtgccacgacggcgggattctggaaggcgactggccgagacaaggccatct 310 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 693 tggatcatgcacgagtaccgcct 715 ||||||||||||||||||||||| Sbjct: 394 tggatcatgcacgagtaccgcct 416 Score = 42.1 bits (21), Expect = 7.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 |||||| || || ||||| ||||||||||| || |||||||| ||| ||||||||| Sbjct: 27 ggtgccaccaggcttccgcttccatccgactgatgaggagctcctctactactacct 83
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 79.8 bits (40), Expect = 3e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||||||||||| | |||| | ||| | Sbjct: 121319 catcggcatgaagaagacgctcgtcttctacaagggccgcgccccgcgcggcgagaagac 121260 Query: 689 cgactggatcatgcacgagtaccgcctcgacg 720 | | ||| || | ||||||||||||||||||| Sbjct: 121259 caagtgggtcctccacgagtaccgcctcgacg 121228 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 121426 aagtacccgacggggctgcgcaccaaccgcgccaccggcgccggctactggaaggccacc 121367 Query: 588 ggc 590 ||| Sbjct: 121366 ggc 121364 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 |||||||||||||| ||||||| || || || |||||||| |||||| |||||||||| Sbjct: 121623 tgccgccggggttcaggttccaccccaccgacgaggagctcgtcaccttctacctcgcc 121565
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 79.8 bits (40), Expect = 3e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 646 cgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatgcacg 705 ||||||||||||||||||||||| | ||| | ||| |||| || ||||||||||||||| Sbjct: 50157 cgctcgtcttctacaagggccgcccgcccaagggcaccaagaccaactggatcatgcacg 50098 Query: 706 agtaccgcctcg 717 |||||||||||| Sbjct: 50097 agtaccgcctcg 50086 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 50572 tgccgccggggttccggttccacccgacggacgaggagctg 50532 Score = 50.1 bits (25), Expect = 0.029 Identities = 64/77 (83%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||||||||||||| |||||||| |||| ||| | ||| ||| |||| | ||| Sbjct: 13215 aagacgctcgtcttctacctcggccgcgcgccccgtggcgagaagaccggctgggtgatg 13156 Query: 702 cacgagtaccgcctcga 718 ||||||| ||||||||| Sbjct: 13155 cacgagttccgcctcga 13139 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Minus Query: 416 cgtcatccccgacgtcgacctcaacaagctcgagccatgg 455 ||||||| ||||||||||||||||||| |||||||||| Sbjct: 13529 cgtcatcggcgacgtcgacctcaacaagtgcgagccatgg 13490
>ref|NM_001057226.1| Oryza sativa (japonica cultivar-group) Os03g0624600 (Os03g0624600) mRNA, complete cds Length = 1345 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 |||||||||||||||||||||| |||||||| ||||||||| | || |||||||||||| Sbjct: 118 tgccgccggggttccggttccacccgacggacgaggagctggtgacgtactacctcgcc 176 Score = 58.0 bits (29), Expect = 1e-04 Identities = 62/73 (84%) Strand = Plus / Plus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||||||||| | ||||||||||||||||| | | |||| | ||||||| ||||| Sbjct: 312 aagtacccgacggggatccgcaccaaccgcgccacggactccggctactggaagaccacc 371 Query: 588 ggccgggacaagg 600 ||| |||||||| Sbjct: 372 ggcaaggacaagg 384 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 419 catccccgacgtcgacctcaacaagctcgagccatgggac 458 |||| |||||||||||||||||||| ||||||||||||| Sbjct: 212 catcgccgacgtcgacctcaacaagtgcgagccatgggac 251
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete sequence Length = 144383 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 |||||||||||||||||||||| |||||||| ||||||||| | || |||||||||||| Sbjct: 40021 tgccgccggggttccggttccacccgacggacgaggagctggtgacgtactacctcgcc 39963 Score = 58.0 bits (29), Expect = 1e-04 Identities = 62/73 (84%) Strand = Plus / Minus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||||||||| | ||||||||||||||||| | | |||| | ||||||| ||||| Sbjct: 39189 aagtacccgacggggatccgcaccaaccgcgccacggactccggctactggaagaccacc 39130 Query: 588 ggccgggacaagg 600 ||| |||||||| Sbjct: 39129 ggcaaggacaagg 39117 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 419 catccccgacgtcgacctcaacaagctcgagccatgggac 458 |||| |||||||||||||||||||| ||||||||||||| Sbjct: 39927 catcgccgacgtcgacctcaacaagtgcgagccatgggac 39888
>dbj|AK062675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G11, full insert sequence Length = 1345 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcc 383 |||||||||||||||||||||| |||||||| ||||||||| | || |||||||||||| Sbjct: 118 tgccgccggggttccggttccacccgacggacgaggagctggtgacgtactacctcgcc 176 Score = 58.0 bits (29), Expect = 1e-04 Identities = 62/73 (84%) Strand = Plus / Plus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||||||||| | ||||||||||||||||| | | |||| | ||||||| ||||| Sbjct: 312 aagtacccgacggggatccgcaccaaccgcgccacggactccggctactggaagaccacc 371 Query: 588 ggccgggacaagg 600 ||| |||||||| Sbjct: 372 ggcaaggacaagg 384 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 419 catccccgacgtcgacctcaacaagctcgagccatgggac 458 |||| |||||||||||||||||||| ||||||||||||| Sbjct: 212 catcgccgacgtcgacctcaacaagtgcgagccatgggac 251
>gb|AY020823.1| Oryza sativa microsatellite MRG3148 containing (TA)X14, genomic sequence Length = 228 Score = 75.8 bits (38), Expect = 5e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||| |||||||||||| ||| | || ||||||||| | ||| |||||||||||||| Sbjct: 1 aagaccctcgtcttctacgtcggcagggcgccccacggcaagaagaccgactggatcatg 60 Query: 702 cacgagtaccgcctcgac 719 |||||||||||||||||| Sbjct: 61 cacgagtaccgcctcgac 78
>dbj|AK242268.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075186C19, full insert sequence Length = 1495 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||| | || ||| | ||| ||||| | Sbjct: 408 catcggcatgaagaagacgctcgtcttctacaagggcagggctcccaagggcgacaagac 467 Query: 689 cgactggatcatgcacgagtaccgcctcgacgacgcc 725 | ||||| |||||||||||||| | |||| ||||||| Sbjct: 468 caactgggtcatgcacgagtacaggctcgccgacgcc 504
>ref|NM_001049654.1| Oryza sativa (japonica cultivar-group) Os01g0393100 (Os01g0393100) mRNA, complete cds Length = 1583 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||| | || ||| | ||| ||||| | Sbjct: 465 catcggcatgaagaagacgctcgtcttctacaagggcagggctcccaagggcgacaagac 524 Query: 689 cgactggatcatgcacgagtaccgcctcgacgacgcc 725 | ||||| |||||||||||||| | |||| ||||||| Sbjct: 525 caactgggtcatgcacgagtacaggctcgccgacgcc 561
>ref|NM_001048300.1| Oryza sativa (japonica cultivar-group) Os01g0104500 (Os01g0104500) mRNA, complete cds Length = 963 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||| | || ||| | ||| ||||| | Sbjct: 339 catcggcatgaagaagacgctcgtcttctacaagggcagggctcccaagggcgacaagac 398 Query: 689 cgactggatcatgcacgagtaccgcctcgacgacgcc 725 | ||||| |||||||||||||| | |||| ||||||| Sbjct: 399 caactgggtcatgcacgagtacaggctcgccgacgcc 435
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||| | || ||| | ||| ||||| | Sbjct: 241353 catcggcatgaagaagacgctcgtcttctacaagggcagggctcccaagggcgacaagac 241412 Query: 689 cgactggatcatgcacgagtaccgcctcgacgacgcc 725 | ||||| |||||||||||||| | |||| ||||||| Sbjct: 241413 caactgggtcatgcacgagtacaggctcgccgacgcc 241449 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Minus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||| | || ||| | ||| ||||| | Sbjct: 16703895 catcggcatgaagaagacgctcgtcttctacaagggcagggctcccaagggcgacaagac 16703836 Query: 689 cgactggatcatgcacgagtaccgcctcgacgacgcc 725 | ||||| |||||||||||||| | |||| ||||||| Sbjct: 16703835 caactgggtcatgcacgagtacaggctcgccgacgcc 16703799 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||||| |||||||| Sbjct: 34687015 gactggatcatgcacgagtaccgcctcgccgacgccg 34686979 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 38394606 tgccgccggggttccggttccacccgacggacgaggagctg 38394566 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcca 384 |||||||||| ||||||||||| |||||||| |||||||| ||| | ||||||||| || Sbjct: 215279 tgccgccgggattccggttccacccgacggacgaggagctcctcctccactacctcggca 215338 Query: 385 ag 386 || Sbjct: 215339 ag 215340 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 38394159 actggatcatgcacgagtaccgcctcgccgacg 38394127 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||| | |||||| Sbjct: 215649 ctggatcatgcacgagtaccgcctcgccaacgccg 215683 Score = 50.1 bits (25), Expect = 0.029 Identities = 31/33 (93%) Strand = Plus / Plus Query: 333 gggttccggttccatccgacggaggaggagctg 365 |||||| ||||||| |||||||||||||||||| Sbjct: 38605232 gggttcaggttccacccgacggaggaggagctg 38605264 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1653 ctacgtacatgcatgcgtgcgtgcatggc 1681 |||||||||||||||| ||| |||||||| Sbjct: 3155584 ctacgtacatgcatgcatgcatgcatggc 3155556 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1653 ctacgtacatgcatgcgtgcgtgcatggc 1681 |||||||||||||||| ||| |||||||| Sbjct: 3171396 ctacgtacatgcatgcatgcatgcatggc 3171368 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1217 cgagcacgtcgtctccggcgg 1237 ||||||||||||||||||||| Sbjct: 12476775 cgagcacgtcgtctccggcgg 12476755 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 333 gggttccggttccatccgacggaggaggagctg 365 |||||||| ||| | |||||||||||||||||| Sbjct: 37327805 gggttccgcttctacccgacggaggaggagctg 37327837 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 688 ccgactggatcatgcacgagtaccgcctc 716 |||||||| ||||||||||||||||||| Sbjct: 40565795 ccgactgggccatgcacgagtaccgcctc 40565823
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Minus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||| | || ||| | ||| ||||| | Sbjct: 133844 catcggcatgaagaagacgctcgtcttctacaagggcagggctcccaagggcgacaagac 133785 Query: 689 cgactggatcatgcacgagtaccgcctcgacgacgcc 725 | ||||| |||||||||||||| | |||| ||||||| Sbjct: 133784 caactgggtcatgcacgagtacaggctcgccgacgcc 133748
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||| | || ||| | ||| ||||| | Sbjct: 83023 catcggcatgaagaagacgctcgtcttctacaagggcagggctcccaagggcgacaagac 83082 Query: 689 cgactggatcatgcacgagtaccgcctcgacgacgcc 725 | ||||| |||||||||||||| | |||| ||||||| Sbjct: 83083 caactgggtcatgcacgagtacaggctcgccgacgcc 83119 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcca 384 |||||||||| ||||||||||| |||||||| |||||||| ||| | ||||||||| || Sbjct: 56949 tgccgccgggattccggttccacccgacggacgaggagctcctcctccactacctcggca 57008 Query: 385 ag 386 || Sbjct: 57009 ag 57010 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||| | |||||| Sbjct: 57319 ctggatcatgcacgagtaccgcctcgccaacgccg 57353
>dbj|AK107407.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-E05, full insert sequence Length = 1587 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Plus Query: 629 catcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtc 688 |||||||||| |||||||||||||||||||||||| | || ||| | ||| ||||| | Sbjct: 469 catcggcatgaagaagacgctcgtcttctacaagggcagggctcccaagggcgacaagac 528 Query: 689 cgactggatcatgcacgagtaccgcctcgacgacgcc 725 | ||||| |||||||||||||| | |||| ||||||| Sbjct: 529 caactgggtcatgcacgagtacaggctcgccgacgcc 565
>ref|NM_001070098.1| Oryza sativa (japonica cultivar-group) Os09g0497900 (Os09g0497900) mRNA, complete cds Length = 1574 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 |||||||||||||| ||||||| |||||||| |||||||| ||||||||||||| Sbjct: 442 tgccgccggggttcaggttccacccgacggacgaggagctcatcacctactacct 496
>ref|NM_001055407.1| Oryza sativa (japonica cultivar-group) Os03g0133000 (Os03g0133000) mRNA, complete cds Length = 1271 Score = 69.9 bits (35), Expect = 3e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||||||||||||| |||| |||||||| | |||| |||| | |||||| ||||| Sbjct: 486 aagacgctcgtcttctaccagggtcgcgccccgcgcggcaccaagacggactgggtcatg 545 Query: 702 cacgagtaccgcctc 716 |||||||||||||| Sbjct: 546 aacgagtaccgcctc 560
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08, complete sequence Length = 138054 Score = 69.9 bits (35), Expect = 3e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||||||||||||| |||| |||||||| | |||| |||| | |||||| ||||| Sbjct: 68971 aagacgctcgtcttctaccagggtcgcgccccgcgcggcaccaagacggactgggtcatg 68912 Query: 702 cacgagtaccgcctc 716 |||||||||||||| Sbjct: 68911 aacgagtaccgcctc 68897
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 |||||||||||||| ||||||| |||||||| |||||||| ||||||||||||| Sbjct: 9494 tgccgccggggttcaggttccacccgacggacgaggagctcatcacctactacct 9440
>emb|AJ833968.1| Zea mays partial mRNA for hypothetical protein (cuc3 gene), and 3' UTR Length = 1300 Score = 69.9 bits (35), Expect = 3e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||||||||||||||||||||| || || | |||| | ||| || | ||| || || Sbjct: 337 aagacgctcgtcttctacaagggccgggcgccgcgcggcgagaagaccaagtgggtcctg 396 Query: 702 cacgagtaccgcctcgacg 720 ||||||||||||||||||| Sbjct: 397 cacgagtaccgcctcgacg 415 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccaccgccgccgggttctggaaggccacc 587 |||||||| |||||| || |||||||||||||||| |||||| | ||||||||||||| Sbjct: 223 aagtaccccacgggcctccgtaccaaccgcgccaccggcgccggatactggaaggccacc 282 Query: 588 gg 589 || Sbjct: 283 gg 284
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 |||||||||||||| ||||||| |||||||| |||||||| ||||||||||||| Sbjct: 18964232 tgccgccggggttcaggttccacccgacggacgaggagctcatcacctactacct 18964178 Score = 61.9 bits (31), Expect = 8e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 688 ccgactggatcatgcacgagtaccgcctcgacgac 722 |||||||| |||||||||||||||||||||||||| Sbjct: 21602201 ccgactgggtcatgcacgagtaccgcctcgacgac 21602235 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 19454256 tgccgccggggttcaggttccacccgacggacgaggagctg 19454296 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 ||||||||||||||||| |||||||| |||||| || | | |||||||||| Sbjct: 21601672 ccggggttccggttccacccgacggacgaggagttggtgaactactacctc 21601722 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Plus Query: 404 gatcgacctcgacgtcatccccgacgtcgacctcaacaagctcgagccatggga 457 |||||| |||||| ||||||| || ||||||||| ||||| |||||||||||| Sbjct: 21601746 gatcgagctcgacatcatccctgaagtcgacctctacaagtgcgagccatggga 21601799 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacgccg 726 ||||| ||||||||||||||||||||| || ||||| Sbjct: 19454737 actgggtcatgcacgagtaccgcctcgccgccgccg 19454772 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 692 ctggatcatgcacgagtaccgcctc 716 |||| |||||||||||||||||||| Sbjct: 14563804 ctgggtcatgcacgagtaccgcctc 14563780 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 548 caccaaccgcgccaccgccgc 568 ||||||||||||||||||||| Sbjct: 15814469 caccaaccgcgccaccgccgc 15814449
>dbj|AK102511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095I08, full insert sequence Length = 1575 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 |||||||||||||| ||||||| |||||||| |||||||| ||||||||||||| Sbjct: 443 tgccgccggggttcaggttccacccgacggacgaggagctcatcacctactacct 497
>emb|CT833247.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI241J15, full insert sequence Length = 1947 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 639 cgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatc 698 |||||||||||||||||||||||||| ||||| ||| |||| | |||||||| || Sbjct: 921 cgcaagacgctcgtcttctacaagggtcgcgctcccggcggcgagcgcaccgactgggtc 980 Query: 699 atgcacgagtaccgcctc 716 |||||||||||||||||| Sbjct: 981 atgcacgagtaccgcctc 998
>emb|CT833246.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI238F12, full insert sequence Length = 1883 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 639 cgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatc 698 |||||||||||||||||||||||||| ||||| ||| |||| | |||||||| || Sbjct: 920 cgcaagacgctcgtcttctacaagggtcgcgctcccggcggcgagcgcaccgactgggtc 979 Query: 699 atgcacgagtaccgcctc 716 |||||||||||||||||| Sbjct: 980 atgcacgagtaccgcctc 997
>ref|NM_001071988.1| Oryza sativa (japonica cultivar-group) Os10g0571600 (Os10g0571600) mRNA, partial cds Length = 1104 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 639 cgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatc 698 |||||||||||||||||||||||||| ||||| ||| |||| | |||||||| || Sbjct: 129 cgcaagacgctcgtcttctacaagggtcgcgctcccggcggcgagcgcaccgactgggtc 188 Query: 699 atgcacgagtaccgcctc 716 |||||||||||||||||| Sbjct: 189 atgcacgagtaccgcctc 206
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 639 cgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatc 698 |||||||||||||||||||||||||| ||||| ||| |||| | |||||||| || Sbjct: 155721 cgcaagacgctcgtcttctacaagggtcgcgctcccggcggcgagcgcaccgactgggtc 155780 Query: 699 atgcacgagtaccgcctc 716 |||||||||||||||||| Sbjct: 155781 atgcacgagtaccgcctc 155798
>dbj|AK110684.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-H07, full insert sequence Length = 1104 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 639 cgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatc 698 |||||||||||||||||||||||||| ||||| ||| |||| | |||||||| || Sbjct: 129 cgcaagacgctcgtcttctacaagggtcgcgctcccggcggcgagcgcaccgactgggtc 188 Query: 699 atgcacgagtaccgcctc 716 |||||||||||||||||| Sbjct: 189 atgcacgagtaccgcctc 206
>emb|CT829415.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN071I03, full insert sequence Length = 711 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 131 tgccgccggggttccggttccacccgacggacgaggagctg 171
>emb|CT829414.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106H19, full insert sequence Length = 1124 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 133 tgccgccggggttccggttccacccgacggacgaggagctg 173 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 580 actggatcatgcacgagtaccgcctcgccgacg 612
>emb|CT829369.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA056N06, full insert sequence Length = 1536 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 128 tgccgccggggttccggttccacccgacggacgaggagctg 168 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgcctcg 717 |||||||||||||||||||||||||| Sbjct: 486 ctggatcatgcacgagtaccgcctcg 511 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 418 tcatccccgacgtcgacctcaacaagctcgagccatgggac 458 ||||| ||||||||||| || ||||| |||| ||||||||| Sbjct: 221 tcatcgccgacgtcgacatctacaagttcgatccatgggac 261
>ref|NM_001067199.1| Oryza sativa (japonica cultivar-group) Os07g0683200 (Os07g0683200) mRNA, partial cds Length = 1650 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 139 tgccgccggggttccggttccacccgacggacgaggagctg 179 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgcctcg 717 |||||||||||||||||||||||||| Sbjct: 577 ctggatcatgcacgagtaccgcctcg 602 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 418 tcatccccgacgtcgacctcaacaagctcgagccatgggac 458 ||||| ||||||||||| || ||||| |||| ||||||||| Sbjct: 232 tcatcgccgacgtcgacatctacaagttcgatccatgggac 272
>ref|NM_001066552.1| Oryza sativa (japonica cultivar-group) Os07g0566500 (Os07g0566500) mRNA, complete cds Length = 1817 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 166 tgccgccggggttccggttccacccgacggacgaggagctg 206 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccg 712 |||||||||||||||||||||| Sbjct: 526 actggatcatgcacgagtaccg 547
>ref|NM_001062103.1| Oryza sativa (japonica cultivar-group) Os05g0418800 (Os05g0418800) mRNA, complete cds Length = 1254 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 329 gccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||| |||||||||||||||||| Sbjct: 126 gccggggttccggttccacccgacggaggaggagctg 162 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgcctc 716 |||||||||| |||||||||||||| Sbjct: 477 ctggatcatgaacgagtaccgcctc 501
>ref|NM_001051551.1| Oryza sativa (japonica cultivar-group) Os01g0884300 (Os01g0884300) mRNA, complete cds Length = 1526 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 135 tgccgccggggttccggttccacccgacggacgaggagctg 175 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 483 actggatcatgcacgagtaccgcctcgccgacg 515
>ref|NM_001051152.1| Oryza sativa (japonica cultivar-group) Os01g0816100 (Os01g0816100) mRNA, complete cds Length = 1282 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||||| |||||||| Sbjct: 538 gactggatcatgcacgagtaccgcctcgccgacgccg 574
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 329 gccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||| |||||||||||||||||| Sbjct: 46239 gccggggttccggttccacccgacggaggaggagctg 46203 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 692 ctggatcatgcacgagtaccgcctc 716 |||||||||| |||||||||||||| Sbjct: 45797 ctggatcatgaacgagtaccgcctc 45773
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 329 gccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||| |||||||||||||||||| Sbjct: 20374494 gccggggttccggttccacccgacggaggaggagctg 20374458 Score = 60.0 bits (30), Expect = 3e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 682 acaagtccgactggatcatgcacgagtaccgcctcgacgacg 723 ||||| || ||||||||||||||||||||||||||| ||||| Sbjct: 20534315 acaagaccaactggatcatgcacgagtaccgcctcgccgacg 20534356 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 20533898 tgccgccggggttcaggttccacccgacggacgaggagctg 20533938 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 921 gccggcgccggcgccgccccc 941 ||||||||||||||||||||| Sbjct: 2924779 gccggcgccggcgccgccccc 2924799 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 921 gccggcgccggcgccgccccc 941 ||||||||||||||||||||| Sbjct: 20011199 gccggcgccggcgccgccccc 20011219 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 692 ctggatcatgcacgagtaccgcctc 716 |||||||||| |||||||||||||| Sbjct: 20374052 ctggatcatgaacgagtaccgcctc 20374028
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1148D12 Length = 132060 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||||| |||||||| Sbjct: 2255 gactggatcatgcacgagtaccgcctcgccgacgccg 2219
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||||| |||||||| Sbjct: 139032 gactggatcatgcacgagtaccgcctcgccgacgccg 138996
>gb|AY742218.1| Saccharum officinarum NAC23 mRNA, complete cds Length = 891 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 29 tgccgccggggttccggttccacccgacggacgaggagctg 69 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 377 actggatcatgcacgagtaccgcctcgccgacg 409
>emb|AJ010829.1|TSP010829 Triticum sp. mRNA for GRAB1 protein Length = 1090 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 143 tgccgccggggttccggttccacccgacggacgaggagctg 183 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||||| || ||||| Sbjct: 493 gactggatcatgcacgagtaccgcctcgccggcgccg 529
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 155431 tgccgccggggttccggttccacccgacggacgaggagctg 155391 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 154984 actggatcatgcacgagtaccgcctcgccgacg 154952
>gb|AF254558.1|AF254558 Oryza sativa NAC6 (NAC6) gene, complete cds Length = 4817 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2176 tgccgccggggttccggttccacccgacggacgaggagctg 2216 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 2623 actggatcatgcacgagtaccgcctcgccgacg 2655
>gb|AY986504.1| Oryza sativa (japonica cultivar-group) NAC protein mRNA, complete cds Length = 1332 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||||| |||||||| Sbjct: 522 gactggatcatgcacgagtaccgcctcgccgacgccg 558
>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1773_H01 Length = 146543 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 121706 tgccgccggggttccggttccacccgacggacgaggagctg 121666 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccg 712 |||||||||||||||||||||| Sbjct: 121111 actggatcatgcacgagtaccg 121090
>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1092_A07 Length = 137081 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 23150 tgccgccggggttccggttccacccgacggacgaggagctg 23110 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccg 712 |||||||||||||||||||||| Sbjct: 22555 actggatcatgcacgagtaccg 22534
>dbj|AK073848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069M07, full insert sequence Length = 1283 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||||| |||||||| Sbjct: 539 gactggatcatgcacgagtaccgcctcgccgacgccg 575
>dbj|AK068606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157G23, full insert sequence Length = 1650 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 139 tgccgccggggttccggttccacccgacggacgaggagctg 179 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgcctcg 717 |||||||||||||||||||||||||| Sbjct: 577 ctggatcatgcacgagtaccgcctcg 602 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 418 tcatccccgacgtcgacctcaacaagctcgagccatgggac 458 ||||| ||||||||||| || ||||| |||| ||||||||| Sbjct: 232 tcatcgccgacgtcgacatctacaagttcgatccatgggac 272
>dbj|AK068392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149P14, full insert sequence Length = 1529 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 137 tgccgccggggttccggttccacccgacggacgaggagctg 177 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 485 actggatcatgcacgagtaccgcctcgccgacg 517
>dbj|AK063406.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A08, full insert sequence Length = 1817 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 166 tgccgccggggttccggttccacccgacggacgaggagctg 206 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccg 712 |||||||||||||||||||||| Sbjct: 526 actggatcatgcacgagtaccg 547
>dbj|AB028185.1| Oryza sativa mRNA for OsNAC6 protein, complete cds Length = 1423 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 137 tgccgccggggttccggttccacccgacggacgaggagctg 177 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 485 actggatcatgcacgagtaccgcctcgccgacg 517
>dbj|AB028183.1| Oryza sativa mRNA for OsNAC4 protein, complete cds Length = 1264 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||||| |||||||| Sbjct: 511 gactggatcatgcacgagtaccgcctcgccgacgccg 547
>ref|NM_001067376.1| Oryza sativa (japonica cultivar-group) Os08g0113500 (Os08g0113500) mRNA, complete cds Length = 1128 Score = 63.9 bits (32), Expect = 2e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 329 gccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||| ||||||||||||||||| Sbjct: 93 gccggggttccggttccacccgacggaggaggagct 128
>emb|AJ567188.1|GHI567188 Gossypium hirsutum microsatellite DNA mGhCIR243, clone CIR243 Length = 316 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Minus Query: 513 agccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccggg 572 |||||||| ||||||||||||||||| || || || || ||||| ||||| || || || Sbjct: 171 agccacaaagacaagaagtacccgaccgggactcggactaaccgtgccacggcggcgggt 112 Query: 573 ttctggaaggccaccggccgggacaagg 600 || ||||| ||||||||||| ||||||| Sbjct: 111 ttttggaaagccaccggccgtgacaagg 84
>dbj|AK072275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012F04, full insert sequence Length = 1640 Score = 63.9 bits (32), Expect = 2e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 329 gccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||| ||||||||||||||||| Sbjct: 161 gccggggttccggttccacccgacggaggaggagct 196
>dbj|AK071052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075E09, full insert sequence Length = 1891 Score = 63.9 bits (32), Expect = 2e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 329 gccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||| ||||||||||||||||| Sbjct: 390 gccggggttccggttccacccgacggaggaggagct 425
>dbj|AK068393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L09, full insert sequence Length = 2424 Score = 63.9 bits (32), Expect = 2e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 329 gccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||| ||||||||||||||||| Sbjct: 161 gccggggttccggttccacccgacggaggaggagct 196
>emb|CT829509.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103O19, full insert sequence Length = 1505 Score = 61.9 bits (31), Expect = 8e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgcc 560 |||||| | |||||||||||||||| ||| ||||||||||| | ||| |||||||| ||| Sbjct: 379 tggtacttcttcagccacaaggacatgaaatacccgacgggaatgcgaaccaaccgagcc 438 Query: 561 acc 563 ||| Sbjct: 439 acc 441 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 gtcgacctcaacaagctcgagccatggga 457 ||||||||||||||| |||||||||||| Sbjct: 316 gtcgacctcaacaagtgcgagccatggga 344
>ref|NM_001072161.1| Oryza sativa (japonica cultivar-group) Os11g0127600 (Os11g0127600) mRNA, complete cds Length = 1569 Score = 61.9 bits (31), Expect = 8e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgcc 560 |||||| | |||||||||||||||| ||| ||||||||||| | ||| |||||||| ||| Sbjct: 380 tggtacttcttcagccacaaggacatgaaatacccgacggggatgcgaaccaaccgagcc 439 Query: 561 acc 563 ||| Sbjct: 440 acc 442 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 gtcgacctcaacaagctcgagccatggga 457 ||||||||||||||| |||||||||||| Sbjct: 317 gtcgacctcaacaagtgcgagccatggga 345
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 61.9 bits (31), Expect = 8e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 688 ccgactggatcatgcacgagtaccgcctcgacgac 722 |||||||| |||||||||||||||||||||||||| Sbjct: 58827 ccgactgggtcatgcacgagtaccgcctcgacgac 58861 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 ||||||||||||||||| |||||||| |||||| || | | |||||||||| Sbjct: 58298 ccggggttccggttccacccgacggacgaggagttggtgaactactacctc 58348 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Plus Query: 404 gatcgacctcgacgtcatccccgacgtcgacctcaacaagctcgagccatggga 457 |||||| |||||| ||||||| || ||||||||| ||||| |||||||||||| Sbjct: 58372 gatcgagctcgacatcatccctgaagtcgacctctacaagtgcgagccatggga 58425
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence Length = 147941 Score = 61.9 bits (31), Expect = 8e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgcc 560 |||||| | |||||||||||||||| ||| ||||||||||| | ||| |||||||| ||| Sbjct: 119476 tggtacttcttcagccacaaggacatgaaatacccgacggggatgcgaaccaaccgagcc 119417 Query: 561 acc 563 ||| Sbjct: 119416 acc 119414 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Minus Query: 510 ttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccacc 563 ||||||| |||||||| ||| ||||||||||| | ||| |||||||| |||||| Sbjct: 147812 ttcagccgcaaggacatgaaatacccgacggggatgcgaaccaaccgagccacc 147759 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 429 gtcgacctcaacaagctcgagccatggga 457 ||||||||||||||| |||||||||||| Sbjct: 119704 gtcgacctcaacaagtgcgagccatggga 119676
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 61.9 bits (31), Expect = 8e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgcc 560 |||||| | |||||||||||||||| ||| ||||||||||| | ||| |||||||| ||| Sbjct: 1271139 tggtacttcttcagccacaaggacatgaaatacccgacggggatgcgaaccaaccgagcc 1271198 Query: 561 acc 563 ||| Sbjct: 1271199 acc 1271201 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 4281621 actggatcatgcacgagtaccgcctcgccgacg 4281589 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccg 712 |||| ||||||||||||||||||||||||| Sbjct: 1235923 caagaccgactggatcatgcacgagtaccg 1235952 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Plus Query: 510 ttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccacc 563 ||||||| |||||||| ||| ||||||||||| | ||| |||||||| |||||| Sbjct: 1242803 ttcagccgcaaggacatgaaatacccgacggggatgcgaaccaaccgagccacc 1242856 Score = 50.1 bits (25), Expect = 0.029 Identities = 34/37 (91%) Strand = Plus / Plus Query: 328 cgccggggttccggttccatccgacggaggaggagct 364 ||||||||||||| ||| | ||||||||||||||||| Sbjct: 2533567 cgccggggttccgcttctacccgacggaggaggagct 2533603 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| || |||||| Sbjct: 4282058 tgccgccggggttcaggttccacccgacggacgacgagctg 4282018 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 419 catccccgacgtcgacctcaacaagctcgagccatggga 457 ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 1242588 catccacgaggtcgacctcaacaagtgcgagccatggga 1242626 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||| ||| | | |||| |||||||||||||||| Sbjct: 1235790 ccaaccgcgccgccggctcggggtactggaaggccaccggc 1235830 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 gtcgacctcaacaagctcgagccatggga 457 ||||||||||||||| |||||||||||| Sbjct: 1270911 gtcgacctcaacaagtgcgagccatggga 1270939
>dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1228_C03, complete sequence Length = 31468 Score = 61.9 bits (31), Expect = 8e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 688 ccgactggatcatgcacgagtaccgcctcgacgac 722 |||||||| |||||||||||||||||||||||||| Sbjct: 10525 ccgactgggtcatgcacgagtaccgcctcgacgac 10559 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 ||||||||||||||||| |||||||| |||||| || | | |||||||||| Sbjct: 9996 ccggggttccggttccacccgacggacgaggagttggtgaactactacctc 10046 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Plus Query: 404 gatcgacctcgacgtcatccccgacgtcgacctcaacaagctcgagccatggga 457 |||||| |||||| ||||||| || ||||||||| ||||| |||||||||||| Sbjct: 10070 gatcgagctcgacatcatccctgaagtcgacctctacaagtgcgagccatggga 10123
>dbj|AK107090.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G12, full insert sequence Length = 1271 Score = 61.9 bits (31), Expect = 8e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 |||||||||||||||||| |||| |||||||| | |||| |||| | |||||| ||||| Sbjct: 486 aagacgctcgtcttctaccagggtcgcgccccgcgcggcaccaagacggactgggtcatg 545 Query: 702 cacgagtaccgcctc 716 | |||||||||||| Sbjct: 546 aatgagtaccgcctc 560
>dbj|AK067922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121J10, full insert sequence Length = 1570 Score = 61.9 bits (31), Expect = 8e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgcc 560 |||||| | |||||||||||||||| ||| ||||||||||| | ||| |||||||| ||| Sbjct: 381 tggtacttcttcagccacaaggacatgaaatacccgacggggatgcgaaccaaccgagcc 440 Query: 561 acc 563 ||| Sbjct: 441 acc 443 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 gtcgacctcaacaagctcgagccatggga 457 ||||||||||||||| |||||||||||| Sbjct: 318 gtcgacctcaacaagtgcgagccatggga 346
>gb|DQ245435.1| Zea mays clone 15484 mRNA sequence Length = 1086 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 693 tggatcatgcacgagtaccgcctcgacgacgccg 726 ||||||||||||||||||||||||| |||||||| Sbjct: 522 tggatcatgcacgagtaccgcctcgccgacgccg 555 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 169 tgcccccgggcttccggttccacccgacggacgaggagctg 209
>ref|NM_001073780.1| Oryza sativa (japonica cultivar-group) Os12g0610600 (Os12g0610600) mRNA, complete cds Length = 1483 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||||||||||||| |||||||||||||| Sbjct: 369 cgacgtcgacctcaacaaggtcgagccatgggac 402
>ref|NM_001048298.1| Oryza sativa (japonica cultivar-group) Os01g0104200 (Os01g0104200) mRNA, complete cds Length = 1020 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcca 384 |||||||||| ||||||||||| |||||||| |||||||| ||| | ||||||||| || Sbjct: 68 tgccgccgggattccggttccacccgacggacgaggagctcctcctccactacctcggca 127 Query: 385 ag 386 || Sbjct: 128 ag 129 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgcctcgacgacgccg 726 |||||||||||||||||||||||||| | |||||| Sbjct: 438 ctggatcatgcacgagtaccgcctcgccaacgccg 472
>ref|NM_103011.1| Arabidopsis thaliana ANAC012; transcription factor (ANAC012) mRNA, complete cds Length = 1077 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 495 aacgactggtacctgttcagccacaaggacaagaagta 532 |||||||||||| | ||||||||||||||||||||||| Sbjct: 217 aacgactggtacttcttcagccacaaggacaagaagta 254 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||| ||||| |||||||| || | || || ||||| || || ||||||||||||||| Sbjct: 358 aagacactcgtgttctacaaaggaagagctcctcacggtcagaaatccgactggatcatg 417 Query: 702 cacgagtaccgcctcgacga 721 || ||||| ||||||||||| Sbjct: 418 catgagtatcgcctcgacga 437
>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092E21, complete sequence Length = 132649 Score = 60.0 bits (30), Expect = 3e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 682 acaagtccgactggatcatgcacgagtaccgcctcgacgacg 723 ||||| || ||||||||||||||||||||||||||| ||||| Sbjct: 77794 acaagaccaactggatcatgcacgagtaccgcctcgccgacg 77835 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 77377 tgccgccggggttcaggttccacccgacggacgaggagctg 77417
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 683 caagtccgactggatcatgcacgagtaccgcctc 716 |||| ||||||||||||||||||||||||||||| Sbjct: 3398 caagaccgactggatcatgcacgagtaccgcctc 3365
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||||||||||||| |||||||||||||| Sbjct: 25834868 cgacgtcgacctcaacaaggtcgagccatgggac 25834901 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgcc 560 |||||| | |||||||||||||||| ||| ||||| || |||| ||| |||||||| ||| Sbjct: 1146485 tggtacttcttcagccacaaggacatgaaatacccaactggcatgcgaaccaaccgggcc 1146544 Query: 561 acc 563 ||| Sbjct: 1146545 acc 1146547 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccgcctc 716 |||| |||||||||||||||||||||| |||||| Sbjct: 1138868 caagaccgactggatcatgcacgagtatcgcctc 1138901 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 328 cgccggggttccggttccatccgacggaggaggagctg 365 ||||||||||||| ||| | |||||||||||||||||| Sbjct: 2761584 cgccggggttccgattctacccgacggaggaggagctg 2761621 Score = 50.1 bits (25), Expect = 0.029 Identities = 34/37 (91%) Strand = Plus / Plus Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 |||||| ||||||||||||||||||||| || ||||| Sbjct: 17432834 gactgggtcatgcacgagtaccgcctcgccggcgccg 17432870 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Minus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||| ||||| | |||| |||||||||||||||||| Sbjct: 27044718 ccaaccgcgtcaccggctccggcttctggaaggccaccggc 27044678 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggc 583 ||||||||||||| | |||||||| ||||||||| Sbjct: 17432670 ccaaccgcgccacgggcgccgggtactggaaggc 17432703 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||| ||| | | |||| |||||||||||||||| Sbjct: 1138735 ccaaccgcgccgccggctcggggtactggaaggccaccggc 1138775 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 gtcgacctcaacaagctcgagccatggga 457 ||||||||||||||| |||||||||||| Sbjct: 1146306 gtcgacctcaacaagtgcgagccatggga 1146334
>gb|DQ022843.1| Triticum aestivum NAC domain transcription factor (NAC69-3) mRNA, complete cds Length = 1335 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccgcctc 716 |||| ||||||||||||||||||||||||||||| Sbjct: 419 caagaccgactggatcatgcacgagtaccgcctc 452 Score = 44.1 bits (22), Expect = 1.8 Identities = 52/62 (83%) Strand = Plus / Plus Query: 544 cgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggcca 603 ||||| ||||||||||| ||| |||| | |||||||||||||||| |||||||||| Sbjct: 280 cgcgccccaaccgcgccgccgggtccggctactggaaggccaccggcaccgacaaggcca 339 Query: 604 tc 605 || Sbjct: 340 tc 341
>gb|DQ022842.1| Triticum aestivum NAC domain transcription factor (NAC69-2) mRNA, complete cds Length = 1319 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccgcctc 716 |||| ||||||||||||||||||||||||||||| Sbjct: 419 caagaccgactggatcatgcacgagtaccgcctc 452 Score = 44.1 bits (22), Expect = 1.8 Identities = 52/62 (83%) Strand = Plus / Plus Query: 544 cgcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggccgggacaaggcca 603 ||||| ||||||||||| ||| |||| | |||||||||||||||| |||||||||| Sbjct: 280 cgcgccccaaccgcgccgccgggtccggctactggaaggccaccggcaccgacaaggcca 339 Query: 604 tc 605 || Sbjct: 340 tc 341
>gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana BAC F6N18 from chromosome I, complete sequence Length = 92219 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 495 aacgactggtacctgttcagccacaaggacaagaagta 532 |||||||||||| | ||||||||||||||||||||||| Sbjct: 76756 aacgactggtacttcttcagccacaaggacaagaagta 76719 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||| ||||| |||||||| || | || || ||||| || || ||||||||||||||| Sbjct: 76615 aagacactcgtgttctacaaaggaagagctcctcacggtcagaaatccgactggatcatg 76556 Query: 702 cacgagtaccgcctcgacga 721 || ||||| ||||||||||| Sbjct: 76555 catgagtatcgcctcgacga 76536
>dbj|AK071464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097O13, full insert sequence Length = 1486 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||||||||||||| |||||||||||||| Sbjct: 370 cgacgtcgacctcaacaaggtcgagccatgggac 403
>gb|AY625682.1| Triticum aestivum NAC domain transcription factor (NAC69-1) mRNA, complete cds Length = 1423 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccgcctc 716 |||| ||||||||||||||||||||||||||||| Sbjct: 523 caagaccgactggatcatgcacgagtaccgcctc 556
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 425 cgacgtcgacctcaacaagctcgagccatgggac 458 ||||||||||||||||||| |||||||||||||| Sbjct: 56319 cgacgtcgacctcaacaaggtcgagccatgggac 56352
>emb|CT830310.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA059O21, full insert sequence Length = 1013 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 233 tgccgccggggttcaggttccacccgacggacgaggagctg 273
>emb|CT830309.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114J09, full insert sequence Length = 1844 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 233 tgccgccggggttcaggttccacccgacggacgaggagctg 273 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacgccg 726 ||||| ||||||||||||||||||||| || ||||| Sbjct: 708 actgggtcatgcacgagtaccgcctcgccgccgccg 743
>ref|NM_001072451.1| Oryza sativa (japonica cultivar-group) Os11g0184900 (Os11g0184900) mRNA, complete cds Length = 1870 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 472 actggatcatgcacgagtaccgcctcgccgacg 504 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| || |||||| Sbjct: 124 tgccgccggggttcaggttccacccgacggacgacgagctg 164
>ref|NM_001070161.1| Oryza sativa (japonica cultivar-group) Os09g0509100 (Os09g0509100) mRNA, complete cds Length = 1237 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 238 tgccgccggggttcaggttccacccgacggacgaggagctg 278 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacgccg 726 ||||| ||||||||||||||||||||| || ||||| Sbjct: 619 actgggtcatgcacgagtaccgcctcgccgccgccg 654
>ref|NM_001069053.1| Oryza sativa (japonica cultivar-group) Os08g0562200 (Os08g0562200) mRNA, complete cds Length = 2625 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||||||| ||| | ||||||| |||||||| Sbjct: 362 cgcaccaaccgcgccaccgccggcggctactggaagaccaccggc 406 Score = 52.0 bits (26), Expect = 0.007 Identities = 44/50 (88%) Strand = Plus / Plus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||||||||| |||||||| ||||||||| | |||||||||| Sbjct: 149 ccgggattccggttccacccgacggatgaggagctggtgtcctactacct 198 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacg 720 ||||| |||||||||||||||||||||||| Sbjct: 501 actgggtcatgcacgagtaccgcctcgacg 530
>ref|NM_001068893.1| Oryza sativa (japonica cultivar-group) Os08g0535800 (Os08g0535800) mRNA, complete cds Length = 1523 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 320 ggtggtgccgccggggttccggttccatccgacggaggaggagct 364 |||| |||||||||||||| ||||||| |||||||| |||||||| Sbjct: 388 ggtgttgccgccggggttcaggttccacccgacggacgaggagct 432
>ref|NM_001063066.1| Oryza sativa (japonica cultivar-group) Os06g0101800 (Os06g0101800) mRNA, complete cds Length = 2281 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||| ||||||||||||| | |||||||||||||||| Sbjct: 340 ccaaccgctccaccgccgccggctactggaaggccaccggc 380 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgc 713 |||||||||||||||||||||| Sbjct: 482 ctggatcatgcacgagtaccgc 503
>ref|NM_116056.1| Arabidopsis thaliana ANAC066; transcription factor (ANAC066) mRNA, complete cds Length = 1227 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 630 atcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtcc 689 ||||| ||||| |||||||| ||||||||||| || || ||||| || || || || ||| Sbjct: 366 atcgggatgcgaaagacgcttgtcttctacaaaggtcgagcccctcatggtcagaaatcc 425 Query: 690 gactggatcatgcacga 706 || |||||||||||||| Sbjct: 426 gattggatcatgcacga 442 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 435 ctcaacaagctcgagccatgggacatccaagag 467 ||||||||||||||||| ||||| || |||||| Sbjct: 177 ctcaacaagctcgagccttgggatattcaagag 209
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 63131 actggatcatgcacgagtaccgcctcgccgacg 63099 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| || |||||| Sbjct: 63568 tgccgccggggttcaggttccacccgacggacgacgagctg 63528
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 49663 tgccgccggggttcaggttccacccgacggacgaggagctg 49703 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacgccg 726 ||||| ||||||||||||||||||||| || ||||| Sbjct: 50144 actgggtcatgcacgagtaccgcctcgccgccgccg 50179
>gb|AY084323.1| Arabidopsis thaliana clone 103969 mRNA, complete sequence Length = 1227 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 630 atcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtcc 689 ||||| ||||| |||||||| ||||||||||| || || ||||| || || || || ||| Sbjct: 366 atcgggatgcgaaagacgcttgtcttctacaaaggtcgagcccctcatggtcagaaatcc 425 Query: 690 gactggatcatgcacga 706 || |||||||||||||| Sbjct: 426 gattggatcatgcacga 442 Score = 46.1 bits (23), Expect = 0.46 Identities = 86/107 (80%) Strand = Plus / Plus Query: 435 ctcaacaagctcgagccatgggacatccaagagcggtgcaggatcggcaccggcccgcag 494 ||||||||||||||||| ||||| || |||||| ||| | ||| || || |||||| Sbjct: 177 ctcaacaagctcgagccttgggatattcaagagatgtgtaagattggaacgaccccgcaa 236 Query: 495 aacgactggtacctgttcagccacaaggacaagaagtacccgacggg 541 ||||| ||||| | || ||||| |||||||||||||| || ||||| Sbjct: 237 aacgattggtatttctttagccataaggacaagaagtatcccacggg 283
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14 Length = 142001 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Minus Query: 630 atcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtcc 689 ||||| ||||| |||||||| ||||||||||| || || ||||| || || || || ||| Sbjct: 92539 atcgggatgcgaaagacgcttgtcttctacaaaggtcgagcccctcatggtcagaaatcc 92480 Query: 690 gactggatcatgcacga 706 || |||||||||||||| Sbjct: 92479 gattggatcatgcacga 92463
>dbj|AP006847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa148N02 Length = 36400 Score = 58.0 bits (29), Expect = 1e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||| | |||||||||||||||||| |||| | || ||| ||||| |||| ||| Sbjct: 453 tcggcatgaggaagacgctcgtcttctaccaggggagggcgcccaacggcgtcaagaccg 512 Query: 691 actggatcatgcacgagtaccgcctcgac 719 |||| | |||||||||| |||||||||| Sbjct: 513 gctgggttatgcacgagttccgcctcgac 541 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 528 aagtacccgacgggcacgcgcaccaaccgcgccacc 563 |||||| ||||||| |||||||||||||||||||| Sbjct: 338 aagtacgcgacggggtcgcgcaccaaccgcgccacc 373
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||||||| ||| | ||||||| |||||||| Sbjct: 139119 cgcaccaaccgcgccaccgccggcggctactggaagaccaccggc 139075 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccgcctcgacg 720 ||||| |||||||||||||||||||||||| Sbjct: 138980 actgggtcatgcacgagtaccgcctcgacg 138951 Score = 52.0 bits (26), Expect = 0.007 Identities = 44/50 (88%) Strand = Plus / Minus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||||||||| |||||||| ||||||||| | |||||||||| Sbjct: 139332 ccgggattccggttccacccgacggatgaggagctggtgtcctactacct 139283
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 320 ggtggtgccgccggggttccggttccatccgacggaggaggagct 364 |||| |||||||||||||| ||||||| |||||||| |||||||| Sbjct: 103461 ggtgttgccgccggggttcaggttccacccgacggacgaggagct 103505
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||||||| ||| | ||||||| |||||||| Sbjct: 25097 cgcaccaaccgcgccaccgccggcggctactggaagaccaccggc 25053 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccgcctcgacg 720 ||||| |||||||||||||||||||||||| Sbjct: 24958 actgggtcatgcacgagtaccgcctcgacg 24929 Score = 52.0 bits (26), Expect = 0.007 Identities = 44/50 (88%) Strand = Plus / Minus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||||||||| |||||||| ||||||||| | |||||||||| Sbjct: 25310 ccgggattccggttccacccgacggatgaggagctggtgtcctactacct 25261
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 320 ggtggtgccgccggggttccggttccatccgacggaggaggagct 364 |||| |||||||||||||| ||||||| |||||||| |||||||| Sbjct: 22909 ggtgttgccgccggggttcaggttccacccgacggacgaggagct 22953
>dbj|AK120773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008J18, full insert sequence Length = 2626 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||||||| ||| | ||||||| |||||||| Sbjct: 363 cgcaccaaccgcgccaccgccggcggctactggaagaccaccggc 407 Score = 52.0 bits (26), Expect = 0.007 Identities = 44/50 (88%) Strand = Plus / Plus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||||||||| |||||||| ||||||||| | |||||||||| Sbjct: 150 ccgggattccggttccacccgacggatgaggagctggtgtcctactacct 199 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacg 720 ||||| |||||||||||||||||||||||| Sbjct: 502 actgggtcatgcacgagtaccgcctcgacg 531
>dbj|AK104766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H11, full insert sequence Length = 1295 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 320 ggtggtgccgccggggttccggttccatccgacggaggaggagct 364 |||| |||||||||||||| ||||||| |||||||| |||||||| Sbjct: 388 ggtgttgccgccggggttcaggttccacccgacggacgaggagct 432
>dbj|AK102475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I01, full insert sequence Length = 1182 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 473 actggatcatgcacgagtaccgcctcgccgacg 505 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| || |||||| Sbjct: 125 tgccgccggggttcaggttccacccgacggacgacgagctg 165
>dbj|AK099629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057D07, full insert sequence Length = 2439 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||||||| ||| | ||||||| |||||||| Sbjct: 363 cgcaccaaccgcgccaccgccggcggctactggaagaccaccggc 407 Score = 52.0 bits (26), Expect = 0.007 Identities = 44/50 (88%) Strand = Plus / Plus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||||||||| |||||||| ||||||||| | |||||||||| Sbjct: 150 ccgggattccggttccacccgacggatgaggagctggtgtcctactacct 199 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacg 720 ||||| |||||||||||||||||||||||| Sbjct: 502 actgggtcatgcacgagtaccgcctcgacg 531
>dbj|AK069733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030H12, full insert sequence Length = 1998 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 546 cgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||||||||||||||||| ||| | ||||||| |||||||| Sbjct: 363 cgcaccaaccgcgccaccgccggcggctactggaagaccaccggc 407 Score = 52.0 bits (26), Expect = 0.007 Identities = 44/50 (88%) Strand = Plus / Plus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||||||||| |||||||| ||||||||| | |||||||||| Sbjct: 150 ccgggattccggttccacccgacggatgaggagctggtgtcctactacct 199 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacg 720 ||||| |||||||||||||||||||||||| Sbjct: 502 actgggtcatgcacgagtaccgcctcgacg 531
>dbj|AK068776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160K11, full insert sequence Length = 1524 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 320 ggtggtgccgccggggttccggttccatccgacggaggaggagct 364 |||| |||||||||||||| ||||||| |||||||| |||||||| Sbjct: 389 ggtgttgccgccggggttcaggttccacccgacggacgaggagct 433
>dbj|AK067906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126H02, full insert sequence Length = 1454 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 320 ggtggtgccgccggggttccggttccatccgacggaggaggagct 364 |||| |||||||||||||| ||||||| |||||||| |||||||| Sbjct: 547 ggtgttgccgccggggttcaggttccacccgacggacgaggagct 591
>dbj|AK064292.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-H07, full insert sequence Length = 765 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 561 actggatcatgcacgagtaccgcctcgccgacg 593 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| || |||||| Sbjct: 125 tgccgccggggttcaggttccacccgacggacgacgagctg 165
>dbj|AK064178.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-B01, full insert sequence Length = 2281 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||| ||||||||||||| | |||||||||||||||| Sbjct: 340 ccaaccgctccaccgccgccggctactggaaggccaccggc 380 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgc 713 |||||||||||||||||||||| Sbjct: 482 ctggatcatgcacgagtaccgc 503
>dbj|AK063399.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H12, full insert sequence Length = 1868 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 472 actggatcatgcacgagtaccgcctcgccgacg 504 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| || |||||| Sbjct: 124 tgccgccggggttcaggttccacccgacggacgacgagctg 164
>dbj|AK061543.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A02, full insert sequence Length = 1295 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 320 ggtggtgccgccggggttccggttccatccgacggaggaggagct 364 |||| |||||||||||||| ||||||| |||||||| |||||||| Sbjct: 388 ggtgttgccgccggggttcaggttccacccgacggacgaggagct 432
>dbj|AK060509.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D01, full insert sequence Length = 1237 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 238 tgccgccggggttcaggttccacccgacggacgaggagctg 278 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacgccg 726 ||||| ||||||||||||||||||||| || ||||| Sbjct: 619 actgggtcatgcacgagtaccgcctcgccgccgccg 654
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 |||||||| ||||||||||||| | |||||||||||||||| Sbjct: 65263 ccaaccgctccaccgccgccggctactggaaggccaccggc 65303 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 692 ctggatcatgcacgagtaccgc 713 |||||||||||||||||||||| Sbjct: 65405 ctggatcatgcacgagtaccgc 65426
>dbj|AB028184.1| Oryza sativa mRNA for OsNAC5 protein, complete cds Length = 1751 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctcgacgacg 723 ||||||||||||||||||||||||||| ||||| Sbjct: 479 actggatcatgcacgagtaccgcctcgccgacg 511 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||||||||||||| ||||||| |||||||| || |||||| Sbjct: 131 tgccgccggggttcaggttccacccgacggacgacgagctg 171
>gb|AC185362.2| Populus trichocarpa clone Pop1-56N11, complete sequence Length = 101630 Score = 56.0 bits (28), Expect = 5e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 513 agccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccggg 572 ||||||||||||||||| || || || || ||||||||||| || || || || || ||| Sbjct: 96447 agccacaaggacaagaaatatccaactggtacgcgcaccaatcgggcaactgctgctggg 96506 Query: 573 ttctggaaggccaccggccgggacaagg 600 || |||||||| || ||||| ||||||| Sbjct: 96507 ttttggaaggctactggccgtgacaagg 96534
>emb|CT830107.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA218A09, full insert sequence Length = 2355 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 1032 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 1087 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 1323 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 1382 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 1383 cacgagtaccgcctc 1397 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 1188 tggtacttcttctgcctcaaggacaggaagtacccgacggg 1228
>emb|CT828636.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN012A02, full insert sequence Length = 1861 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 534 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 589 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 825 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 884 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 885 cacgagtaccgcctc 899 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 690 tggtacttcttctgcctcaaggacaggaagtacccgacggg 730
>emb|CR855203.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0219H12, complete sequence Length = 116014 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 64231 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 64286 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 64656 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 64715 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 64716 cacgagtaccgcctc 64730 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 64521 tggtacttcttctgcctcaaggacaggaagtacccgacggg 64561
>ref|NM_001059527.1| Oryza sativa (japonica cultivar-group) Os04g0460600 (Os04g0460600) mRNA, complete cds Length = 1401 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 150 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 205 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 441 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 500 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 501 cacgagtaccgcctc 515 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 306 tggtacttcttctgcctcaaggacaggaagtacccgacggg 346
>ref|NM_001055007.1| Oryza sativa (japonica cultivar-group) Os02g0810900 (Os02g0810900) mRNA, complete cds Length = 1530 Score = 56.0 bits (28), Expect = 5e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||||||||| || ||||||||| |||||||||||| ||||| ||| || Sbjct: 609 tcggcatgcgcaagacccttgtcttctaccgcggccgcgcccccaacggcgtcaaaacca 668 Query: 691 actggatcatgcacga 706 ||||| |||||||||| Sbjct: 669 actgggtcatgcacga 684
>gb|DQ520641.1| Oryza sativa (japonica cultivar-group) NAC domain protein (TIL1) mRNA, complete cds Length = 1192 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 93 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 148 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 384 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 443 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 444 cacgagtaccgcctc 458 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 249 tggtacttcttctgcctcaaggacaggaagtacccgacggg 289
>ref|NM_130243.2| Arabidopsis thaliana ANAC043/EMB2301; transcription factor (ANAC043/EMB2301) mRNA, complete cds Length = 1382 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 404 gatcgacctcgacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatcca 463 |||||| || || ||||| | |||||| || ||||||||||||||||| |||||||| || Sbjct: 220 gatcgatcttgatgtcattcgcgacgttgatctcaacaagctcgagccttgggacattca 279 Query: 464 agag 467 |||| Sbjct: 280 agag 283
>gb|BT020413.1| Arabidopsis thaliana At2g46770 mRNA, complete cds Length = 1098 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 404 gatcgacctcgacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatcca 463 |||||| || || ||||| | |||||| || ||||||||||||||||| |||||||| || Sbjct: 126 gatcgatcttgatgtcattcgcgacgttgatctcaacaagctcgagccttgggacattca 185 Query: 464 agag 467 |||| Sbjct: 186 agag 189
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 64211 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 64266 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 64636 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 64695 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 64696 cacgagtaccgcctc 64710 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 64501 tggtacttcttctgcctcaaggacaggaagtacccgacggg 64541
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 56.0 bits (28), Expect = 5e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||||||||| || ||||||||| |||||||||||| ||||| ||| || Sbjct: 11361 tcggcatgcgcaagacccttgtcttctaccgcggccgcgcccccaacggcgtcaaaacca 11420 Query: 691 actggatcatgcacga 706 ||||| |||||||||| Sbjct: 11421 actgggtcatgcacga 11436
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 56.0 bits (28), Expect = 5e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||||||||| || ||||||||| |||||||||||| ||||| ||| || Sbjct: 50464 tcggcatgcgcaagacccttgtcttctaccgcggccgcgcccccaacggcgtcaaaacca 50523 Query: 691 actggatcatgcacga 706 ||||| |||||||||| Sbjct: 50524 actgggtcatgcacga 50539
>gb|BT002931.1| Arabidopsis thaliana clone RAFL15-02-N12 (R20259) putative NAM (no apical meristem) protein (At2g46770) mRNA, complete cds Length = 1398 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 404 gatcgacctcgacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatcca 463 |||||| || || ||||| | |||||| || ||||||||||||||||| |||||||| || Sbjct: 220 gatcgatcttgatgtcattcgcgacgttgatctcaacaagctcgagccttgggacattca 279 Query: 464 agag 467 |||| Sbjct: 280 agag 283
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1113_G05 Length = 131445 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 324 gtgccgccggggttccggttccatccgacggaggaggagctgctcacctactacct 379 ||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 131330 gtgccaccgggtttccggttccatccgacggacgaggaattgctctactactacct 131385
>dbj|AK104626.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B03, full insert sequence Length = 1401 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 150 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 205 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 441 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 500 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 501 cacgagtaccgcctc 515 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 306 tggtacttcttctgcctcaaggacaggaagtacccgacggg 346
>dbj|AK071020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080H09, full insert sequence Length = 1548 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 153 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 208 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 444 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 503 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 504 cacgagtaccgcctc 518 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 309 tggtacttcttctgcctcaaggacaggaagtacccgacggg 349
>dbj|AK070982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075A01, full insert sequence Length = 1531 Score = 56.0 bits (28), Expect = 5e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||||||||| || ||||||||| |||||||||||| ||||| ||| || Sbjct: 610 tcggcatgcgcaagacccttgtcttctaccgcggccgcgcccccaacggcgtcaaaacca 669 Query: 691 actggatcatgcacga 706 ||||| |||||||||| Sbjct: 670 actgggtcatgcacga 685
>dbj|AK061745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F10, full insert sequence Length = 1401 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 150 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 205 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 441 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 500 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 501 cacgagtaccgcctc 515 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 306 tggtacttcttctgcctcaaggacaggaagtacccgacggg 346
>dbj|AK060976.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E09, full insert sequence Length = 1400 Score = 56.0 bits (28), Expect = 5e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccg 690 |||||||||||||||| || ||||||||| |||||||||||| ||||| ||| || Sbjct: 483 tcggcatgcgcaagacccttgtcttctaccgcggccgcgcccccaacggcgtcaaaacca 542 Query: 691 actggatcatgcacga 706 ||||| |||||||||| Sbjct: 543 actgggtcatgcacga 558
>dbj|AB028181.1| Oryza sativa mRNA for OsNAC2 protein, complete cds Length = 1377 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 336 ttccggttccatccgacggaggaggagctgctcacctactacctcgccaagaaggt 391 ||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||||| Sbjct: 145 ttccgcttccacccgaccgacgaggagctgatcacgcactacctcgccaagaaggt 200 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatcatg 701 ||||||||||| ||||||| ||| ||||| ||| | || | ||||| | |||| ||||| Sbjct: 436 aagacgctcgttttctacacggggcgcgctcccaagggggagaagtctggctgggtcatg 495 Query: 702 cacgagtaccgcctc 716 ||||||||||||||| Sbjct: 496 cacgagtaccgcctc 510 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacggg 541 |||||| | ||| ||| |||||||| ||||||||||||||| Sbjct: 301 tggtacttcttctgcctcaaggacaggaagtacccgacggg 341
>gb|AY625683.1| Triticum aestivum NAC domain transcription factor (NAC2) mRNA, complete cds Length = 1450 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccgcctcgacgacgccg 726 |||| |||||||||||||||| ||||| ||||||| |||||||| Sbjct: 495 caagaccgactggatcatgcatgagtatcgcctcgccgacgccg 538
>gb|DQ869677.1| Aegilops tauschii NAC transcription factor NAM-D2 (NAM-D2) gene, partial cds Length = 1458 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 327 ccgccggggttccggttccatccgacggaggaggagctg 365 |||||||| ||||||||||| |||||||| ||||||||| Sbjct: 85 ccgccgggcttccggttccacccgacggacgaggagctg 123 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctc 716 |||||||||||||||||||||||||| Sbjct: 638 actggatcatgcacgagtaccgcctc 663
>gb|DQ869676.1| Triticum turgidum subsp. durum NAC transcription factor NAM-B2 (NAM-B2) gene, complete cds Length = 1498 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 327 ccgccggggttccggttccatccgacggaggaggagctg 365 |||||||| ||||||||||| |||||||| ||||||||| Sbjct: 85 ccgccgggcttccggttccacccgacggacgaggagctg 123 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctc 716 |||||||||||||||||||||||||| Sbjct: 633 actggatcatgcacgagtaccgcctc 658
>gb|DQ869675.1| Aegilops tauschii NAC transcription factor NAM-D1 (NAM-D1) gene, complete cds Length = 1550 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 327 ccgccggggttccggttccatccgacggaggaggagctg 365 |||||||| ||||||||||| |||||||| ||||||||| Sbjct: 100 ccgccgggcttccggttccacccgacggacgaggagctg 138
>gb|DQ869674.1| Triticum turgidum subsp. durum nonfunctional NAC transcription factor NAM-B1 (NAM-B1) gene, partial sequence Length = 1543 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 327 ccgccggggttccggttccatccgacggaggaggagctg 365 |||||||| ||||||||||| |||||||| ||||||||| Sbjct: 104 ccgccgggcttccggttccacccgacggacgaggagctg 142 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctc 716 |||||||||||||||||||||||||| Sbjct: 689 actggatcatgcacgagtaccgcctc 714
>gb|DQ869673.1| Triticum turgidum subsp. dicoccoides NAC transcription factor NAM-B1 (NAM-B1) gene, complete cds Length = 1542 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 327 ccgccggggttccggttccatccgacggaggaggagctg 365 |||||||| ||||||||||| |||||||| ||||||||| Sbjct: 103 ccgccgggcttccggttccacccgacggacgaggagctg 141 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctc 716 |||||||||||||||||||||||||| Sbjct: 688 actggatcatgcacgagtaccgcctc 713
>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17, complete sequence Length = 245486 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Minus Query: 327 ccgccggggttccggttccatccgacggaggaggagctg 365 |||||||| ||||||||||| |||||||| ||||||||| Sbjct: 80290 ccgccgggcttccggttccacccgacggacgaggagctg 80252 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Minus Query: 691 actggatcatgcacgagtaccgcctc 716 |||||||||||||||||||||||||| Sbjct: 79705 actggatcatgcacgagtaccgcctc 79680
>ref|NM_001072567.1| Oryza sativa (japonica cultivar-group) Os12g0123800 (Os12g0123800) mRNA, complete cds Length = 1191 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgcc 560 |||||| | |||||||||||||||| ||| ||||| || |||| ||| |||||||| ||| Sbjct: 223 tggtacttcttcagccacaaggacatgaaatacccaactggcatgcgaaccaaccgggcc 282 Query: 561 acc 563 ||| Sbjct: 283 acc 285 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 gtcgacctcaacaagctcgagccatggga 457 ||||||||||||||| |||||||||||| Sbjct: 160 gtcgacctcaacaagtgcgagccatggga 188
>ref|NM_001055240.1| Oryza sativa (japonica cultivar-group) Os03g0109000 (Os03g0109000) mRNA, complete cds Length = 1077 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 666 cgcgccccccacggccacaagtccgactggatcatgcacgagtaccgcctc 716 ||||||||| |||||| |||| ||| |||| |||||||||||| ||||||| Sbjct: 488 cgcgcccccaacggccgcaagaccgcctgggtcatgcacgagttccgcctc 538
>gb|BT016249.1| Zea mays clone Contig82 mRNA sequence Length = 1208 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1581 cgtacgtcgtgccgcatgcatgcatgc 1607 ||||||||||||||||||||||||||| Sbjct: 840 cgtacgtcgtgccgcatgcatgcatgc 866
>dbj|AK070416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051N16, full insert sequence Length = 1077 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 666 cgcgccccccacggccacaagtccgactggatcatgcacgagtaccgcctc 716 ||||||||| |||||| |||| ||| |||| |||||||||||| ||||||| Sbjct: 488 cgcgcccccaacggccgcaagaccgcctgggtcatgcacgagttccgcctc 538
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126974 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 501 tggtacctgttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgcc 560 |||||| | |||||||||||||||| ||| ||||| || |||| ||| |||||||| ||| Sbjct: 85468 tggtacttcttcagccacaaggacatgaaatacccaactggcatgcgaaccaaccgggcc 85527 Query: 561 acc 563 ||| Sbjct: 85528 acc 85530 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccgcctc 716 |||| |||||||||||||||||||||| |||||| Sbjct: 77851 caagaccgactggatcatgcacgagtatcgcctc 77884 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||| ||| | | |||| |||||||||||||||| Sbjct: 77718 ccaaccgcgccgccggctcggggtactggaaggccaccggc 77758 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 gtcgacctcaacaagctcgagccatggga 457 ||||||||||||||| |||||||||||| Sbjct: 85289 gtcgacctcaacaagtgcgagccatggga 85317
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 666 cgcgccccccacggccacaagtccgactggatcatgcacgagtaccgcctc 716 ||||||||| |||||| |||| ||| |||| |||||||||||| ||||||| Sbjct: 101409 cgcgcccccaacggccgcaagaccgcctgggtcatgcacgagttccgcctc 101459
>gb|DQ869679.1| Hordeum vulgare subsp. vulgare NAC transcription factor NAM-2 (NAM-2) gene, complete cds Length = 1528 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctc 716 |||||||||||||||||||||||||| Sbjct: 648 actggatcatgcacgagtaccgcctc 673
>gb|DQ869672.1| Triticum turgidum subsp. durum NAC transcription factor NAM-A1 (NAM-A1) gene, complete cds Length = 1549 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 691 actggatcatgcacgagtaccgcctc 716 |||||||||||||||||||||||||| Sbjct: 689 actggatcatgcacgagtaccgcctc 714 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 330 ccggggttccggttccatccgacggaggaggagctg 365 ||||| ||||||||||| |||||||| ||||||||| Sbjct: 103 ccgggcttccggttccacccgacggacgaggagctg 138
>gb|DQ244280.1| Zea mays clone 4143 mRNA sequence Length = 1318 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 693 tggatcatgcacgagtaccgcctcgacgacgccg 726 ||||||||||||||||||||||||| ||| |||| Sbjct: 546 tggatcatgcacgagtaccgcctcgccgaagccg 579 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctg 365 |||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 193 tgcccccgggcttccggttccacccgacggacgaggagctg 233
>emb|CT830250.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121I23, full insert sequence Length = 1371 Score = 52.0 bits (26), Expect = 0.007 Identities = 44/50 (88%) Strand = Plus / Plus Query: 631 tcggcatgcgcaagacgctcgtcttctacaagggccgcgccccccacggc 680 |||||||||||||||| || ||||||||| |||||||||||| ||||| Sbjct: 623 tcggcatgcgcaagacccttgtcttctaccgcggccgcgcccccaacggc 672
>emb|CT837668.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124G03, full insert sequence Length = 2178 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 545 gcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 1108 gcgcaccaaccgcgccacccgctccggctactggaaggccaccggc 1153 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||||||| || | ||| |||||||| Sbjct: 144 tgccgccggggttccggttccaccccagggacgaggagct 183
>ref|NM_001072728.1| Oryza sativa (japonica cultivar-group) Os12g0156100 (Os12g0156100) mRNA, complete cds Length = 1278 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 328 cgccggggttccggttccatccgacggaggaggagctg 365 ||||||||||||| ||| | |||||||||||||||||| Sbjct: 212 cgccggggttccgattctacccgacggaggaggagctg 249
>ref|NM_001072566.1| Oryza sativa (japonica cultivar-group) Os12g0123700 (Os12g0123700) mRNA, complete cds Length = 1182 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccgcctc 716 |||| |||||||||||||||||||||| |||||| Sbjct: 381 caagaccgactggatcatgcacgagtatcgcctc 414 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||| ||| | | |||| |||||||||||||||| Sbjct: 248 ccaaccgcgccgccggctcggggtactggaaggccaccggc 288
>ref|NM_001072160.1| Oryza sativa (japonica cultivar-group) Os11g0127000 (Os11g0127000) mRNA, complete cds Length = 1056 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Plus Query: 510 ttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccacc 563 ||||||| |||||||| ||| ||||||||||| | ||| |||||||| |||||| Sbjct: 211 ttcagccgcaaggacatgaaatacccgacggggatgcgaaccaaccgagccacc 264 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 419 catccccgacgtcgacctcaacaagctcgagccatggga 457 ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 135 catccacgaggtcgacctcaacaagtgcgagccatggga 173
>ref|NM_001072159.1| Oryza sativa (japonica cultivar-group) Os11g0126900 (Os11g0126900) mRNA, complete cds Length = 1653 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccg 712 |||| ||||||||||||||||||||||||| Sbjct: 584 caagaccgactggatcatgcacgagtaccg 613 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||| ||| | | |||| |||||||||||||||| Sbjct: 451 ccaaccgcgccgccggctcggggtactggaaggccaccggc 491
>ref|NM_001060430.1| Oryza sativa (japonica cultivar-group) Os04g0619000 (Os04g0619000) mRNA, complete cds Length = 981 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 545 gcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 306 gcgcaccaaccgcgccacccgctccggctactggaaggccaccggc 351 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||||||| || | ||| |||||||| Sbjct: 14 tgccgccggggttccggttccaccccagggacgaggagct 53 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 425 cgacgtcgacctcaacaagctcgagccatggga 457 ||||||||||||||||||| |||||| ||||| Sbjct: 120 cgacgtcgacctcaacaagtgcgagccgtggga 152
>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete sequence Length = 131195 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 545 gcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 94971 gcgcaccaaccgcgccacccgctccggctactggaaggccaccggc 94926 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||||||| || | ||| |||||||| Sbjct: 95933 tgccgccggggttccggttccaccccagggacgaggagct 95894
>ref|NM_202450.1| Arabidopsis thaliana ANAC033 (ANAC033) mRNA, complete cds Length = 1338 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagct 364 |||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 182 ggtgcctccgggattccggtttcatccaacggaggaggagct 223 Score = 48.1 bits (24), Expect = 0.12 Identities = 57/68 (83%) Strand = Plus / Plus Query: 513 agccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccggg 572 ||||||||||||||||| || ||||| || || || || ||||| || || || |||||| Sbjct: 372 agccacaaggacaagaaatatccgactgggacccgaacgaaccgggcgacagcagccggg 431 Query: 573 ttctggaa 580 |||||||| Sbjct: 432 ttctggaa 439
>ref|NM_106606.2| Arabidopsis thaliana ANAC033; transcription factor (ANAC033) mRNA, complete cds Length = 1534 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagct 364 |||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 342 ggtgcctccgggattccggtttcatccaacggaggaggagct 383 Score = 48.1 bits (24), Expect = 0.12 Identities = 57/68 (83%) Strand = Plus / Plus Query: 513 agccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccggg 572 ||||||||||||||||| || ||||| || || || || ||||| || || || |||||| Sbjct: 532 agccacaaggacaagaaatatccgactgggacccgaacgaaccgggcgacagcagccggg 591 Query: 573 ttctggaa 580 |||||||| Sbjct: 592 ttctggaa 599
>ref|NM_202449.1| Arabidopsis thaliana ANAC033 (ANAC033) mRNA, complete cds Length = 1493 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagct 364 |||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 255 ggtgcctccgggattccggtttcatccaacggaggaggagct 296 Score = 48.1 bits (24), Expect = 0.12 Identities = 57/68 (83%) Strand = Plus / Plus Query: 513 agccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccggg 572 ||||||||||||||||| || ||||| || || || || ||||| || || || |||||| Sbjct: 445 agccacaaggacaagaaatatccgactgggacccgaacgaaccgggcgacagcagccggg 504 Query: 573 ttctggaa 580 |||||||| Sbjct: 505 ttctggaa 512
>gb|AY021240.1| Oryza sativa microsatellite MRG3565 containing (TA)X22, genomic sequence Length = 244 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Minus Query: 404 gatcgacctcgacgtcatccccgacgtcgacctcaacaagctcgagccatggga 457 |||||| |||||| ||||||| || ||||||||| ||||| |||||||||||| Sbjct: 229 gatcgagctcgacatcatccctgaagtcgacctctacaagtgcgagccatggga 176
>gb|BT018924.1| Zea mays clone Contig43.F mRNA sequence Length = 1361 Score = 52.0 bits (26), Expect = 0.007 Identities = 65/78 (83%) Strand = Plus / Plus Query: 639 cgcaagacgctcgtcttctacaagggccgcgccccccacggccacaagtccgactggatc 698 ||||||||||||||||||||| |||||||||||| |||| | ||| |||| || Sbjct: 94 cgcaagacgctcgtcttctaccgcggccgcgcccccggcggcgagcgcaccgcctgggtc 153 Query: 699 atgcacgagtaccgcctc 716 |||||||||||||||||| Sbjct: 154 atgcacgagtaccgcctc 171
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccg 712 |||| ||||||||||||||||||||||||| Sbjct: 131729 caagaccgactggatcatgcacgagtaccg 131758 Score = 52.0 bits (26), Expect = 0.007 Identities = 47/54 (87%) Strand = Plus / Plus Query: 510 ttcagccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccacc 563 ||||||| |||||||| ||| ||||||||||| | ||| |||||||| |||||| Sbjct: 138609 ttcagccgcaaggacatgaaatacccgacggggatgcgaaccaaccgagccacc 138662 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 419 catccccgacgtcgacctcaacaagctcgagccatggga 457 ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 138394 catccacgaggtcgacctcaacaagtgcgagccatggga 138432 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||| ||| | | |||| |||||||||||||||| Sbjct: 131596 ccaaccgcgccgccggctcggggtactggaaggccaccggc 131636
>gb|AC005310.3| Arabidopsis thaliana chromosome 2 clone F19D11 map CIC06C03, complete sequence Length = 68415 Score = 52.0 bits (26), Expect = 0.007 Identities = 53/62 (85%) Strand = Plus / Minus Query: 404 gatcgacctcgacgtcatccccgacgtcgacctcaacaagctcgagccatgggacatcca 463 |||||| || || ||||| | |||||| || ||||||||||||||||| |||||||| || Sbjct: 21906 gatcgatcttgatgtcattcgcgacgttgatctcaacaagctcgagccttgggacattca 21847 Query: 464 ag 465 || Sbjct: 21846 ag 21845
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1418 gcacggcggcgccaccgtcaccggcg 1443 |||||||||||||||||||||||||| Sbjct: 244135 gcacggcggcgccaccgtcaccggcg 244110
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 545 gcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 53958 gcgcaccaaccgcgccacccgctccggctactggaaggccaccggc 53913 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||||||| || | ||| |||||||| Sbjct: 54931 tgccgccggggttccggttccaccccagggacgaggagct 54892 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 425 cgacgtcgacctcaacaagctcgagccatggga 457 ||||||||||||||||||| |||||| ||||| Sbjct: 54825 cgacgtcgacctcaacaagtgcgagccgtggga 54793
>emb|AJ243961.1| Oryza sativa chromosome 4 BAC l1332 genomic sequences Length = 74658 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 545 gcgcaccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||||||||||| | |||| | |||||||||||||||| Sbjct: 64426 gcgcaccaaccgcgccacccgctccggctactggaaggccaccggc 64471 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Plus Query: 325 tgccgccggggttccggttccatccgacggaggaggagct 364 |||||||||||||||||||||| || | ||| |||||||| Sbjct: 63464 tgccgccggggttccggttccaccccagggacgaggagct 63503
>emb|AJ010830.1|TSP010830 Triticum sp. mRNA for GRAB2 protein Length = 1295 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 527 gaagtacccgacgggcacgcgcaccaaccg 556 ||||||||||||||| |||||||||||||| Sbjct: 357 gaagtacccgacggggacgcgcaccaaccg 386 Score = 46.1 bits (23), Expect = 0.46 Identities = 44/51 (86%) Strand = Plus / Plus Query: 330 ccggggttccggttccatccgacggaggaggagctgctcacctactacctc 380 ||||||||||||||||| || || || |||||| || ||||| |||||||| Sbjct: 169 ccggggttccggttccaccccaccgacgaggaggtggtcacccactacctc 219 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 424 ccgacgtcgacctcaacaagctcgagccatggga 457 |||||||||||||||||||| |||||| ||||| Sbjct: 263 ccgacgtcgacctcaacaagaacgagccgtggga 296 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 642 aagacgctcgtcttctacaagggccgcgccccc 674 |||||||||||||| |||| |||||||||||| Sbjct: 478 aagacgctcgtcttttacaccggccgcgccccc 510
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 52.0 bits (26), Expect = 0.007 Identities = 56/66 (84%) Strand = Plus / Minus Query: 325 tgccgccggggttccggttccatccgacggaggaggagctgctcacctactacctcgcca 384 ||||| |||||||||||||| || || || |||||||| |||||||||||||||||| Sbjct: 86831 tgccggcggggttccggttcttccccaccgacgaggagctcgtcacctactacctcgcca 86772 Query: 385 agaagg 390 ||||| Sbjct: 86771 ggaagg 86766 Score = 48.1 bits (24), Expect = 0.12 Identities = 27/28 (96%) Strand = Plus / Minus Query: 836 gtgggtcatctgcagggtgttcaagaag 863 |||||| ||||||||||||||||||||| Sbjct: 85386 gtgggtgatctgcagggtgttcaagaag 85359
>dbj|AK109534.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-C08, full insert sequence Length = 1278 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 328 cgccggggttccggttccatccgacggaggaggagctg 365 ||||||||||||| ||| | |||||||||||||||||| Sbjct: 212 cgccggggttccgattctacccgacggaggaggagctg 249
>emb|BX816157.1|CNS0ADFI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZB12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1492 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagct 364 |||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 255 ggtgcctccgggattccggtttcatccaacggaggaggagct 296
>emb|BX816756.1|CNS0AD2K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1534 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagct 364 |||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 342 ggtgcctccgggattccggtttcatccaacggaggaggagct 383 Score = 48.1 bits (24), Expect = 0.12 Identities = 57/68 (83%) Strand = Plus / Plus Query: 513 agccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccggg 572 ||||||||||||||||| || ||||| || || || || ||||| || || || |||||| Sbjct: 532 agccacaaggacaagaaatatccgactgggacccgaacgaaccgggcgacagcagccggg 591 Query: 573 ttctggaa 580 |||||||| Sbjct: 592 ttctggaa 599
>emb|BX817209.1|CNS0AAPH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH93ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1340 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagct 364 |||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 182 ggtgcctccgggattccggtttcatccaacggaggaggagct 223 Score = 48.1 bits (24), Expect = 0.12 Identities = 57/68 (83%) Strand = Plus / Plus Query: 513 agccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccggg 572 ||||||||||||||||| || ||||| || || || || ||||| || || || |||||| Sbjct: 372 agccacaaggacaagaaatatccgactgggacccgaacgaaccgggcgacagcagccggg 431 Query: 573 ttctggaa 580 |||||||| Sbjct: 432 ttctggaa 439
>dbj|AK069257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011O06, full insert sequence Length = 1654 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 683 caagtccgactggatcatgcacgagtaccg 712 |||| ||||||||||||||||||||||||| Sbjct: 585 caagaccgactggatcatgcacgagtaccg 614 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||| ||| | | |||| |||||||||||||||| Sbjct: 452 ccaaccgcgccgccggctcggggtactggaaggccaccggc 492
>gb|AC010793.3|AC010793 Genomic sequence for Arabidopsis thaliana BAC F20B17 from chromosome I, complete sequence Length = 90149 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Minus Query: 323 ggtgccgccggggttccggttccatccgacggaggaggagct 364 |||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 5527 ggtgcctccgggattccggtttcatccaacggaggaggagct 5486 Score = 48.1 bits (24), Expect = 0.12 Identities = 57/68 (83%) Strand = Plus / Minus Query: 513 agccacaaggacaagaagtacccgacgggcacgcgcaccaaccgcgccaccgccgccggg 572 ||||||||||||||||| || ||||| || || || || ||||| || || || |||||| Sbjct: 4634 agccacaaggacaagaaatatccgactgggacccgaacgaaccgggcgacagcagccggg 4575 Query: 573 ttctggaa 580 |||||||| Sbjct: 4574 ttctggaa 4567 Score = 42.1 bits (21), Expect = 7.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 824 gcaggaggacgggtgggtcatctgcagggtgttcaagaagaagaa 868 |||||| || |||||||| | ||||| ||||||||||||||||| Sbjct: 4326 gcaggaagatgggtgggttgtatgcagagtgttcaagaagaagaa 4282
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Minus Query: 328 cgccggggttccggttccatccgacggaggaggagctg 365 ||||||||||||| ||| | |||||||||||||||||| Sbjct: 108863 cgccggggttccgattctacccgacggaggaggagctg 108826
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 328 cgccggggttccggttccatccgacggaggaggagctg 365 ||||||||||||| ||| | |||||||||||||||||| Sbjct: 130509 cgccggggttccgattctacccgacggaggaggagctg 130546
>emb|CT829332.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114M05, full insert sequence Length = 1239 Score = 50.1 bits (25), Expect = 0.029 Identities = 40/45 (88%) Strand = Plus / Plus Query: 320 ggtggtgccgccggggttccggttccatccgacggaggaggagct 364 |||| |||||||||||||| | ||||| |||||||| |||||||| Sbjct: 332 ggtgttgccgccggggttcagattccacccgacggacgaggagct 376
>emb|CT829331.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110N11, full insert sequence Length = 1468 Score = 50.1 bits (25), Expect = 0.029 Identities = 40/45 (88%) Strand = Plus / Plus Query: 320 ggtggtgccgccggggttccggttccatccgacggaggaggagct 364 |||| |||||||||||||| | ||||| |||||||| |||||||| Sbjct: 333 ggtgttgccgccggggttcagattccacccgacggacgaggagct 377
>emb|CT834402.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA005N01, full insert sequence Length = 1138 Score = 50.1 bits (25), Expect = 0.029 Identities = 37/41 (90%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggccaccggc 590 ||||||||||| ||||| |||| | |||||||||||||||| Sbjct: 327 ccaaccgcgccgccgcctccggctactggaaggccaccggc 367 Score = 50.1 bits (25), Expect = 0.029 Identities = 25/25 (100%) Strand = Plus / Plus Query: 693 tggatcatgcacgagtaccgcctcg 717 ||||||||||||||||||||||||| Sbjct: 464 tggatcatgcacgagtaccgcctcg 488
>dbj|AK243244.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100046N20, full insert sequence Length = 1205 Score = 50.1 bits (25), Expect = 0.029 Identities = 34/37 (91%) Strand = Plus / Plus Query: 690 gactggatcatgcacgagtaccgcctcgacgacgccg 726 |||||| ||||||||||||||||||||| || ||||| Sbjct: 529 gactgggtcatgcacgagtaccgcctcgccggcgccg 565 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 ccaaccgcgccaccgccgccgggttctggaaggc 583 ||||||||||||| | |||||||| ||||||||| Sbjct: 365 ccaaccgcgccacgggcgccgggtactggaaggc 398 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 254,458,704 Number of extensions: 16154084 Number of successful extensions: 452478 Number of sequences better than 10.0: 459 Number of HSP's gapped: 452420 Number of HSP's successfully gapped: 941 Length of query: 1880 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1857 Effective length of database: 18,503,978,556 Effective search space: 34361888178492 Effective search space used: 34361888178492 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
