Clone Information

BLAST Search Result

Clone Name	FLbaf16p22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	AY371050:Os09g0279600	1181	0.0
2	AK101452:Os09g0279600	1181	0.0
3	Os10g0413400:Os10g0413400	32	2.7
4	AF497627:	31	4.6
5	Os02g0293300:Os02g0293300	30	7.8
6	AK067424:Os07g0551700	30	7.8

>AY371050:Os09g0279600 |
          Length = 696
 Score = 1181 bits (3056), Expect = 0.0
 Identities = 580/639 (90%), Positives = 614/639 (96%)
 Frame = +2

Query: 191  PAEFFAENKNIAGFDNPGKSLYTTMRELVENALDSAESISELPDXXXXXXXXXKSKFNTM 370
            PAEFFAENKNIAGFDNPGKSLYTTMRELVENALDSAESISELPD         KSKFNTM
Sbjct: 58   PAEFFAENKNIAGFDNPGKSLYTTMRELVENALDSAESISELPDIEIIIEEITKSKFNTM 117

Query: 371  IGLVDRERVDEALYDDFESSKAREKRLAKEARFQETQAKNAALGKKVKDTPAARGKGRGE 550
            IGLVDR+R+DE LYDDFES+KAREKRLAKEARFQETQAKNAALGKKVK+ PAARGKGRGE
Sbjct: 118  IGLVDRQRIDEELYDDFESAKAREKRLAKEARFQETQAKNAALGKKVKEAPAARGKGRGE 177

Query: 551  ASFFRVTCKDNGRGMPHEDIPNMFGRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLP 730
            A+FFRVTCKDNGRGMPH+DIPNM GRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLP
Sbjct: 178  AAFFRVTCKDNGRGMPHDDIPNMLGRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLP 237

Query: 731  IDIKSSMKGQDYITFCRLDIDIHKNVPHIHLHEKRENNGHWHGAEIQVIIEGNWTTHRSR 910
            I+IKSSMKGQ++I+FC LDIDIHKNVPH+HLHEKREN   WHGAE+QVIIEGNWTTHRS+
Sbjct: 238  IEIKSSMKGQNFISFCLLDIDIHKNVPHVHLHEKRENKDRWHGAELQVIIEGNWTTHRSK 297

Query: 911  ILHYMRQMAVITPYAQFLFRFLSDAAEKNLTIKFARRTDVMPPVPLLTKHHPSAVDLLLI 1090
            ILHYMRQMAVITPYAQFLFRFLSD+ +KNLTI+FARRTDVMPP+PL TKHHPSAVDLLLI
Sbjct: 298  ILHYMRQMAVITPYAQFLFRFLSDSPDKNLTIQFARRTDVMPPIPLQTKHHPSAVDLLLI 357

Query: 1091 KRLITDTTKPNLLQFLQHEFVNISKAHADRLIGEMGPDFNAKTTVNSLTSQQLVRIHQLF 1270
            KRLI++TTK NLLQFLQHEFVNISK+HA+RLIGEMGPDF+AKTTV SLTSQQLVRIHQLF
Sbjct: 358  KRLISETTKQNLLQFLQHEFVNISKSHAERLIGEMGPDFSAKTTVKSLTSQQLVRIHQLF 417

Query: 1271 RQAKFDDPSGNCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFIVEAGVSIGGK 1450
            RQAKFDDPSGNCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFIVEAG+SIGGK
Sbjct: 418  RQAKFDDPSGNCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFIVEAGISIGGK 477

Query: 1451 DVKQGLNIFRFANRIPLLFEQGADVITRTALKRINWSIYKINQQQDEIGVFVSIVSTKIP 1630
            DVK GLNIFR+ANRIPLLFEQGADVITRTALKRINWS YKINQQQD+IGVFVSIVSTKIP
Sbjct: 478  DVKHGLNIFRYANRIPLLFEQGADVITRTALKRINWSSYKINQQQDKIGVFVSIVSTKIP 537

Query: 1631 FKGTGKEYIGDDITEIADAVKSALKQCCVQLKSKIVKKLQAREQQDRKRNLNKYIPDVAR 1810
            FKGTGKEYIGDDITEIA AV+SALKQCC+QLKSKIVKKLQARE+QDRKRNLN+YIPDVAR
Sbjct: 538  FKGTGKEYIGDDITEIASAVQSALKQCCLQLKSKIVKKLQARERQDRKRNLNRYIPDVAR 597

Query: 1811 TIMETLGELADESPPKRPRFDKEDEELLEKINSEEVTEMTFRDCLTQHVEQVDYEMALEY 1990
             IMETLGE+ADESPPKRPR+DKEDEELLEK+NSEEVTEMTFRDCLTQHVEQVDYEMALEY
Sbjct: 598  AIMETLGEIADESPPKRPRYDKEDEELLEKVNSEEVTEMTFRDCLTQHVEQVDYEMALEY 657

Query: 1991 AMQSGVSEEPREAIYLNSLEGSYKFVDFQSPAFVFRFIP 2107
            AMQSGVSEEPREA+YLNSLEGSYKF+DFQSP FVFRFIP
Sbjct: 658  AMQSGVSEEPREALYLNSLEGSYKFIDFQSPVFVFRFIP 696

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>AK101452:Os09g0279600 |
          Length = 696

 Score = 1181 bits (3056), Expect = 0.0
 Identities = 580/639 (90%), Positives = 614/639 (96%)
 Frame = +2

Query: 191  PAEFFAENKNIAGFDNPGKSLYTTMRELVENALDSAESISELPDXXXXXXXXXKSKFNTM 370
            PAEFFAENKNIAGFDNPGKSLYTTMRELVENALDSAESISELPD         KSKFNTM
Sbjct: 58   PAEFFAENKNIAGFDNPGKSLYTTMRELVENALDSAESISELPDIEIIIEEITKSKFNTM 117

Query: 371  IGLVDRERVDEALYDDFESSKAREKRLAKEARFQETQAKNAALGKKVKDTPAARGKGRGE 550
            IGLVDR+R+DE LYDDFES+KAREKRLAKEARFQETQAKNAALGKKVK+ PAARGKGRGE
Sbjct: 118  IGLVDRQRIDEELYDDFESAKAREKRLAKEARFQETQAKNAALGKKVKEAPAARGKGRGE 177

Query: 551  ASFFRVTCKDNGRGMPHEDIPNMFGRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLP 730
            A+FFRVTCKDNGRGMPH+DIPNM GRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLP
Sbjct: 178  AAFFRVTCKDNGRGMPHDDIPNMLGRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLP 237

Query: 731  IDIKSSMKGQDYITFCRLDIDIHKNVPHIHLHEKRENNGHWHGAEIQVIIEGNWTTHRSR 910
            I+IKSSMKGQ++I+FC LDIDIHKNVPH+HLHEKREN   WHGAE+QVIIEGNWTTHRS+
Sbjct: 238  IEIKSSMKGQNFISFCLLDIDIHKNVPHVHLHEKRENKDRWHGAELQVIIEGNWTTHRSK 297

Query: 911  ILHYMRQMAVITPYAQFLFRFLSDAAEKNLTIKFARRTDVMPPVPLLTKHHPSAVDLLLI 1090
            ILHYMRQMAVITPYAQFLFRFLSD+ +KNLTI+FARRTDVMPP+PL TKHHPSAVDLLLI
Sbjct: 298  ILHYMRQMAVITPYAQFLFRFLSDSPDKNLTIQFARRTDVMPPIPLQTKHHPSAVDLLLI 357

Query: 1091 KRLITDTTKPNLLQFLQHEFVNISKAHADRLIGEMGPDFNAKTTVNSLTSQQLVRIHQLF 1270
            KRLI++TTK NLLQFLQHEFVNISK+HA+RLIGEMGPDF+AKTTV SLTSQQLVRIHQLF
Sbjct: 358  KRLISETTKQNLLQFLQHEFVNISKSHAERLIGEMGPDFSAKTTVKSLTSQQLVRIHQLF 417

Query: 1271 RQAKFDDPSGNCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFIVEAGVSIGGK 1450
            RQAKFDDPSGNCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFIVEAG+SIGGK
Sbjct: 418  RQAKFDDPSGNCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFIVEAGISIGGK 477

Query: 1451 DVKQGLNIFRFANRIPLLFEQGADVITRTALKRINWSIYKINQQQDEIGVFVSIVSTKIP 1630
            DVK GLNIFR+ANRIPLLFEQGADVITRTALKRINWS YKINQQQD+IGVFVSIVSTKIP
Sbjct: 478  DVKHGLNIFRYANRIPLLFEQGADVITRTALKRINWSSYKINQQQDKIGVFVSIVSTKIP 537

Query: 1631 FKGTGKEYIGDDITEIADAVKSALKQCCVQLKSKIVKKLQAREQQDRKRNLNKYIPDVAR 1810
            FKGTGKEYIGDDITEIA AV+SALKQCC+QLKSKIVKKLQARE+QDRKRNLN+YIPDVAR
Sbjct: 538  FKGTGKEYIGDDITEIASAVQSALKQCCLQLKSKIVKKLQARERQDRKRNLNRYIPDVAR 597

Query: 1811 TIMETLGELADESPPKRPRFDKEDEELLEKINSEEVTEMTFRDCLTQHVEQVDYEMALEY 1990
             IMETLGE+ADESPPKRPR+DKEDEELLEK+NSEEVTEMTFRDCLTQHVEQVDYEMALEY
Sbjct: 598  AIMETLGEIADESPPKRPRYDKEDEELLEKVNSEEVTEMTFRDCLTQHVEQVDYEMALEY 657

Query: 1991 AMQSGVSEEPREAIYLNSLEGSYKFVDFQSPAFVFRFIP 2107
            AMQSGVSEEPREA+YLNSLEGSYKF+DFQSP FVFRFIP
Sbjct: 658  AMQSGVSEEPREALYLNSLEGSYKFIDFQSPVFVFRFIP 696

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>Os10g0413400:Os10g0413400 |
          Length = 530

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = -3

Query: 672 FPRVCLKPYFVPDSTLPNIFGISSCGIPRPLSLQVTLKNEASPRPFPRAAGVSLTFFPRA 493
           F  +C + Y VP S  P +  +    +PRP+          + RP P AA +++ +FP  
Sbjct: 216 FMSLCKEGYIVPRS--PAVEAVPMDKLPRPVIFH---DGRLARRPTPLAALLAVLWFPVG 270

Query: 492 AFLACV 475
             LACV
Sbjct: 271 FALACV 276

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>AF497627: |
          Length = 653

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +2

Query: 518 TPAARGKGRGEASF-FRVTCKDNGRGMPHEDIPNMFGRVLSGTKYGLRQTRGKFGLG 685
           T + + KG  E S+  R + KD G G+P E + ++F R   G +   R+  G  GLG
Sbjct: 313 TISVKNKGETEDSYTIRFSVKDTGIGIPKEHLESIFERFTQGQEDTTRKFGGT-GLG 368

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>Os02g0293300:Os02g0293300 |
          Length = 628

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
 Frame = +2

Query: 1739 KKLQAREQQDRKRNLNKYIPDVARTIMETLGELADESPPKRPRFDKEDEELLEKINSEEV 1918
            K LQ  +Q D K+ L   I  +   ++  +  +  E    + R D+  EEL EKI   E 
Sbjct: 394  KILQLEKQLDEKQKLELEIQQLRGRLL-VVQHMEGEGVDVKKRTDELTEELNEKIEEMEY 452

Query: 1919 TEMTFRDCLTQHVEQVDYEMALEYAMQSGVSE--EPREAIYLNSL 2047
             E   +  + +  +  D     + A+ SG+SE   PR  I L  +
Sbjct: 453  MEGLNQTLIIKERKTNDELQDAKKALISGLSELLGPRSTIGLKRM 497

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>AK067424:Os07g0551700 |
          Length = 886

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = +2

Query: 773 FCRLDIDIHKNVPHIHLHEKRENNGHWHGAEIQVIIEGNWTTHRSRILHYMRQMAVI 943
           +CR++ D  +    I+L E+      W G  +++    N      R L++M+++A I
Sbjct: 593 YCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLLAGRRLNFMQRIAYI 649


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 65,750,693
Number of extensions: 1487360
Number of successful extensions: 4344
Number of sequences better than 10.0: 6
Number of HSP's gapped: 4341
Number of HSP's successfully gapped: 6
Length of query: 809
Length of database: 15,399,855
Length adjustment: 109
Effective length of query: 700
Effective length of database: 11,035,386
Effective search space: 7724770200
Effective search space used: 7724770200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result