No.
Definition
Score (bits)
E Value
1 ref|NM_001056591.1| Oryza sativa (japonica cultivar-group) Os03g...
632
e-177
2 dbj|AK066604.1| Oryza sativa (japonica cultivar-group) cDNA clon...
617
e-173
3 gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str...
355
4e-94
4 gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str...
355
4e-94
5 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
355
4e-94
6 ref|XM_661804.1| Cryptosporidium hominis TU502 hypothetical prot...
48
0.12
7 ref|XM_625512.1| Cryptosporidium parvum Iowa II Pus1p-like type ...
48
0.12
8 gb|AC002287.1|HUAC002287 Homo sapiens Chromosome 16 BAC clone CI...
46
0.46
9 gb|AC130450.3| Homo sapiens chromosome 16 clone CTA-237H1, compl...
46
0.46
10 gb|AC127459.3| Homo sapiens chromosome 16 clone RP11-20G6, compl...
46
0.46
11 ref|XM_001155327.1| PREDICTED: Pan troglodytes B-cell translocat...
44
1.8
12 ref|XM_001155267.1| PREDICTED: Pan troglodytes B-cell translocat...
44
1.8
13 ref|XM_001102745.1| PREDICTED: Macaca mulatta similar to BTG2 pr...
44
1.8
14 gb|AY228335.1| Xanthomonas citri plasmid pXcB, complete sequence
44
1.8
15 gb|AF489877.1| Phaseolus lunatus clone PlGT3 putative glucosyltr...
44
1.8
16 emb|AL031123.14|HS80N2 Human DNA sequence from clone RP1-80N2 on...
44
1.8
17 gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome
42
7.2
18 gb|AC187765.2| Gallus gallus BAC clone CH261-153K3 from chromoso...
42
7.2
19 gb|AC189020.1| Gallus gallus chromosome Z clone CH261-179F4, com...
42
7.2
20 gb|AC182706.2| Populus trichocarpa clone Pop1-79P19, complete se...
42
7.2
21 gb|AY023244.1| Oryza sativa microsatellite MRG5569 containing (G...
42
7.2
22 gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome...
42
7.2
23 gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome...
42
7.2
24 gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome...
42
7.2
25 gb|AC133902.12| Mus musculus chromosome 10, clone RP24-538B17, c...
42
7.2
26 gb|AF178030.3| Homo sapiens chromosome 8 multiple clones map q23...
42
7.2
27 gb|AC122373.4| Mus musculus BAC clone RP23-464E7 from chromosome...
42
7.2
28 gb|AC151838.6| Mus musculus BAC clone RP23-226C6 from chromosome...
42
7.2
29 dbj|AK169025.1| Mus musculus 17 days pregnant adult female amnio...
42
7.2
30 gb|AC067751.7| Homo sapiens chromosome 10 clone RP11-357K14, com...
42
7.2
31 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
42
7.2
32 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
42
7.2
33 gb|AC040918.7| Homo sapiens chromosome 15, clone RP11-684B21, co...
42
7.2
34 emb|AL138899.23| Human DNA sequence from clone RP11-404O13 on ch...
42
7.2
35 gb|AC151841.5| Mus musculus BAC clone RP23-128P10 from chromosom...
42
7.2
36 dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D...
42
7.2
37 gb|AC012456.10| Homo sapiens BAC clone RP11-484O9 from 2, comple...
42
7.2
38 gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11...
42
7.2
39 gb|AF282854.4| Homo sapiens chromosome X clone RP11-157E12 map q...
42
7.2
40 gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q...
42
7.2
41 gb|AC103805.7| Homo sapiens chromosome 18, clone RP11-1061K3, co...
42
7.2
42 gb|AC119800.2| Homo sapiens chromosome 1 clone RP4-630A11, compl...
42
7.2
43 emb|BX890584.6| Mouse DNA sequence from clone RP23-160I11 on chr...
42
7.2
44 emb|AJ329494.1|HSA329494 Homo sapiens genomic sequence surroundi...
42
7.2
45 dbj|AP002532.1| Homo sapiens genomic DNA, chromosome 1q22-q23, C...
42
7.2
46 dbj|AB045357.1| Homo sapiens genomic DNA, chromosome 1q22-q23, c...
42
7.2
47 dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D...
42
7.2
>gb|AC134885.1 | Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
from chromosome 3, complete sequence
Length = 124550
Score = 355 bits (179), Expect = 4e-94
Identities = 353/411 (85%)
Strand = Plus / Plus
Query: 1177 tcagatccggaaaatggttggtaccgcggtggcagtgaagcgcggattactacccaagga 1236
|||||||||||| ||||||||||| ||||||| || ||||| |||||||||||||| ||
Sbjct: 21019 tcagatccggaagatggttggtacttcggtggcggttaagcgtggattactacccaaaga 21078
Query: 1237 tattataaaactttcacttgcaaagttttctcgcatcgttttaccaatcgcgccctctga 1296
||||||| ||| || |||||||||||||||||||| || |||||||| || || |||||
Sbjct: 21079 tattatagcactgtctcttgcaaagttttctcgcattgtgttaccaattgccccttctga 21138
Query: 1297 agttctgatccttagagataacagtttctgcacaaggaacaagcaagggagtattgttcg 1356
|||| || | ||||||||||||||||||||| |||||||||||||||| ||| |||||
Sbjct: 21139 agttttggtgcttagagataacagtttctgcctgaggaacaagcaagggactatagttcg 21198
Query: 1357 tcctggcatgcagtcaattaatgaatctgaagaaatcaagaagggtgtaatggaattcta 1416
||||| || || ||||| ||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 21199 ccctgggatccaatcaatgaatgaatctgaagaagtcaagaagggggtaatggaattcta 21258
Query: 1417 caaggtggctcttgtgcccgagctagcaaaattcctggatgaatccctgcctccgtggca 1476
|| || |||||||| || ||||||||||| |||||||||| |||| ||||||| ||| |
Sbjct: 21259 cagggcagctcttgttccagagctagcaaacttcctggatgcatccatgcctccatggaa 21318
Query: 1477 agaatgggtggagaacttggaccacttcaccagcataccagattctcagttggatgaagt 1536
||||||||||||||||||||||| ||||| |||||||||||| | ||| |||| |||||
Sbjct: 21319 agaatgggtggagaacttggaccgattcacgagcataccagatccacagctggaggaagt 21378
Query: 1537 taggacagcttatcgagcatggaaagacgattacgaccgggtaaaaatggc 1587
||||| |||||| | | ||||||| || |||||||| |||||||||||
Sbjct: 21379 taggagcgcttatagggtgtggaaagcggactacgaccgagtaaaaatggc 21429
Score = 172 bits (87), Expect = 3e-39
Identities = 135/151 (89%)
Strand = Plus / Plus
Query: 484 ggtacattcactggctacaatgatctcacttaagatggaaatccctgatcgagcatggga 543
||||||||||||||| ||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 18981 ggtacattcactggccacaatgatctctctgaaaatggaaatccctgatcgagcatggga 19040
Query: 544 gaaggatcctgatggcattgctcttgcgaactttattaactcgaatttaccagataatat 603
||| ||||||||||||||||||||| | ||||| |||||||| ||||| ||||| ||| |
Sbjct: 19041 gaatgatcctgatggcattgctctttcaaacttcattaactcaaatttgccagacaatgt 19100
Query: 604 caaagttttcagtatcttgcctgctcaaagg 634
| |||||||||| | |||||||||||||||
Sbjct: 19101 tagagttttcagtgttttgcctgctcaaagg 19131
Score = 139 bits (70), Expect = 4e-29
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 374 attgagtcagttttggaatctgccatcttcaaggcagggggcattcttgagagtaattat 433
||||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||||
Sbjct: 18758 attgagtcagtcttggaaacagccatcttcaaggctgggggcattcttgagagtaattat 18817
Query: 434 ggaaagttgcaaaaagttggttgggaacggagcagccgaactgataaaggggta 487
|| ||| ||||||||||||| |||||| |||| || |||||||||||||||||
Sbjct: 18818 gggaagctgcaaaaagttggctgggaaaggagtagtagaactgataaaggggta 18871
Score = 133 bits (67), Expect = 3e-27
Identities = 136/159 (85%)
Strand = Plus / Plus
Query: 1022 attcaagctagatggctccatgagcctaatgacaatgatagactaagtgcatcacacttc 1081
|||| |||||| ||||| ||||||||| |||| |||||| |||| | ||| ||||| |||
Sbjct: 20448 attcgagctaggtggcttcatgagcctgatgaaaatgatcgactgaatgcttcacatttc 20507
Query: 1082 agagatatcctcacctgctcatgtggagagttgcagagttcatcaggagttcaatttgtg 1141
|||||||||||||| | ||| ||||||||| | |||| |||||||||| |||||||||||
Sbjct: 20508 agagatatcctcacattctcctgtggagagctccagatttcatcaggaattcaatttgtg 20567
Query: 1142 gaactgacgatatgtggagtatcttttatgctacatcag 1180
||| |||| |||| ||||||||||| ||||| ||||||
Sbjct: 20568 gaattgactatatcaggagtatctttcatgctgcatcag 20606
Score = 119 bits (60), Expect = 4e-23
Identities = 126/148 (85%)
Strand = Plus / Plus
Query: 632 aggagttttgatgtaaggagggaatgcttgtaccgggagtacttctatcttctgcctgct 691
|||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 19225 aggagtttcgatgtgaggagggaatgcttgtatcgggaatacttgtatcttcttcctgct 19284
Query: 692 gaaattattggaattaaaagcagttgtagctctggagaagtggaggagcacttaattgaa 751
||||| |||||||||||| | |||||||||||| |||||| ||| ||| | |||
Sbjct: 19285 gaaataattggaattaaaggtggttgtagctctgaagaagtaatggaacacctgtcagaa 19344
Query: 752 ttcaataacatactgaaaggttttgagg 779
||||||| ||| ||||||||||||||||
Sbjct: 19345 ttcaatagcattctgaaaggttttgagg 19372
Score = 107 bits (54), Expect = 1e-19
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 260 ggcgggatgaggtgggagtctacgcggaagaagagggtcgtgctccgcgtcggctacgtc 319
|||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 18071 ggcgggatgaggtgggagtccgcgcggaagaagagggtcgtgctccgcgtaggctacgtc 18130
Query: 320 ggcagcgaataccgaggt 337
|||| || |||||||||
Sbjct: 18131 ggcacggagtaccgaggt 18148
Score = 99.6 bits (50), Expect = 4e-17
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 777 agggaaaccacccatttcataattacactgctcgtgccaagtatagaaaagttctagc 834
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 20188 agggaaaccatccatttcataattacactgctcgtgccaagtataggaaagttctagc 20245
Score = 42.1 bits (21), Expect = 7.2
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 334 aggtcttcagaagcagcgagatctcagcg 362
|||||||||||||||||| || |||||||
Sbjct: 18244 aggtcttcagaagcagcgggagctcagcg 18272
>gb|AC131175.1 | Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0030D15, from chromosome 3, complete sequence
Length = 151972
Score = 355 bits (179), Expect = 4e-94
Identities = 353/411 (85%)
Strand = Plus / Plus
Query: 1177 tcagatccggaaaatggttggtaccgcggtggcagtgaagcgcggattactacccaagga 1236
|||||||||||| ||||||||||| ||||||| || ||||| |||||||||||||| ||
Sbjct: 110067 tcagatccggaagatggttggtacttcggtggcggttaagcgtggattactacccaaaga 110126
Query: 1237 tattataaaactttcacttgcaaagttttctcgcatcgttttaccaatcgcgccctctga 1296
||||||| ||| || |||||||||||||||||||| || |||||||| || || |||||
Sbjct: 110127 tattatagcactgtctcttgcaaagttttctcgcattgtgttaccaattgccccttctga 110186
Query: 1297 agttctgatccttagagataacagtttctgcacaaggaacaagcaagggagtattgttcg 1356
|||| || | ||||||||||||||||||||| |||||||||||||||| ||| |||||
Sbjct: 110187 agttttggtgcttagagataacagtttctgcctgaggaacaagcaagggactatagttcg 110246
Query: 1357 tcctggcatgcagtcaattaatgaatctgaagaaatcaagaagggtgtaatggaattcta 1416
||||| || || ||||| ||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 110247 ccctgggatccaatcaatgaatgaatctgaagaagtcaagaagggggtaatggaattcta 110306
Query: 1417 caaggtggctcttgtgcccgagctagcaaaattcctggatgaatccctgcctccgtggca 1476
|| || |||||||| || ||||||||||| |||||||||| |||| ||||||| ||| |
Sbjct: 110307 cagggcagctcttgttccagagctagcaaacttcctggatgcatccatgcctccatggaa 110366
Query: 1477 agaatgggtggagaacttggaccacttcaccagcataccagattctcagttggatgaagt 1536
||||||||||||||||||||||| ||||| |||||||||||| | ||| |||| |||||
Sbjct: 110367 agaatgggtggagaacttggaccgattcacgagcataccagatccacagctggaggaagt 110426
Query: 1537 taggacagcttatcgagcatggaaagacgattacgaccgggtaaaaatggc 1587
||||| |||||| | | ||||||| || |||||||| |||||||||||
Sbjct: 110427 taggagcgcttatagggtgtggaaagcggactacgaccgagtaaaaatggc 110477
Score = 172 bits (87), Expect = 3e-39
Identities = 135/151 (89%)
Strand = Plus / Plus
Query: 484 ggtacattcactggctacaatgatctcacttaagatggaaatccctgatcgagcatggga 543
||||||||||||||| ||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 108029 ggtacattcactggccacaatgatctctctgaaaatggaaatccctgatcgagcatggga 108088
Query: 544 gaaggatcctgatggcattgctcttgcgaactttattaactcgaatttaccagataatat 603
||| ||||||||||||||||||||| | ||||| |||||||| ||||| ||||| ||| |
Sbjct: 108089 gaatgatcctgatggcattgctctttcaaacttcattaactcaaatttgccagacaatgt 108148
Query: 604 caaagttttcagtatcttgcctgctcaaagg 634
| |||||||||| | |||||||||||||||
Sbjct: 108149 tagagttttcagtgttttgcctgctcaaagg 108179
Score = 139 bits (70), Expect = 4e-29
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 374 attgagtcagttttggaatctgccatcttcaaggcagggggcattcttgagagtaattat 433
||||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||||
Sbjct: 107806 attgagtcagtcttggaaacagccatcttcaaggctgggggcattcttgagagtaattat 107865
Query: 434 ggaaagttgcaaaaagttggttgggaacggagcagccgaactgataaaggggta 487
|| ||| ||||||||||||| |||||| |||| || |||||||||||||||||
Sbjct: 107866 gggaagctgcaaaaagttggctgggaaaggagtagtagaactgataaaggggta 107919
Score = 133 bits (67), Expect = 3e-27
Identities = 136/159 (85%)
Strand = Plus / Plus
Query: 1022 attcaagctagatggctccatgagcctaatgacaatgatagactaagtgcatcacacttc 1081
|||| |||||| ||||| ||||||||| |||| |||||| |||| | ||| ||||| |||
Sbjct: 109496 attcgagctaggtggcttcatgagcctgatgaaaatgatcgactgaatgcttcacatttc 109555
Query: 1082 agagatatcctcacctgctcatgtggagagttgcagagttcatcaggagttcaatttgtg 1141
|||||||||||||| | ||| ||||||||| | |||| |||||||||| |||||||||||
Sbjct: 109556 agagatatcctcacattctcctgtggagagctccagatttcatcaggaattcaatttgtg 109615
Query: 1142 gaactgacgatatgtggagtatcttttatgctacatcag 1180
||| |||| |||| ||||||||||| ||||| ||||||
Sbjct: 109616 gaattgactatatcaggagtatctttcatgctgcatcag 109654
Score = 119 bits (60), Expect = 4e-23
Identities = 126/148 (85%)
Strand = Plus / Plus
Query: 632 aggagttttgatgtaaggagggaatgcttgtaccgggagtacttctatcttctgcctgct 691
|||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 108273 aggagtttcgatgtgaggagggaatgcttgtatcgggaatacttgtatcttcttcctgct 108332
Query: 692 gaaattattggaattaaaagcagttgtagctctggagaagtggaggagcacttaattgaa 751
||||| |||||||||||| | |||||||||||| |||||| ||| ||| | |||
Sbjct: 108333 gaaataattggaattaaaggtggttgtagctctgaagaagtaatggaacacctgtcagaa 108392
Query: 752 ttcaataacatactgaaaggttttgagg 779
||||||| ||| ||||||||||||||||
Sbjct: 108393 ttcaatagcattctgaaaggttttgagg 108420
Score = 107 bits (54), Expect = 1e-19
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 260 ggcgggatgaggtgggagtctacgcggaagaagagggtcgtgctccgcgtcggctacgtc 319
|||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 107119 ggcgggatgaggtgggagtccgcgcggaagaagagggtcgtgctccgcgtaggctacgtc 107178
Query: 320 ggcagcgaataccgaggt 337
|||| || |||||||||
Sbjct: 107179 ggcacggagtaccgaggt 107196
Score = 99.6 bits (50), Expect = 4e-17
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 777 agggaaaccacccatttcataattacactgctcgtgccaagtatagaaaagttctagc 834
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 109236 agggaaaccatccatttcataattacactgctcgtgccaagtataggaaagttctagc 109293
Score = 42.1 bits (21), Expect = 7.2
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 334 aggtcttcagaagcagcgagatctcagcg 362
|||||||||||||||||| || |||||||
Sbjct: 107292 aggtcttcagaagcagcgggagctcagcg 107320
>dbj|AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
Length = 36192742
Score = 355 bits (179), Expect = 4e-94
Identities = 353/411 (85%)
Strand = Plus / Minus
Query: 1177 tcagatccggaaaatggttggtaccgcggtggcagtgaagcgcggattactacccaagga 1236
|||||||||||| ||||||||||| ||||||| || ||||| |||||||||||||| ||
Sbjct: 12563685 tcagatccggaagatggttggtacttcggtggcggttaagcgtggattactacccaaaga 12563626
Query: 1237 tattataaaactttcacttgcaaagttttctcgcatcgttttaccaatcgcgccctctga 1296
||||||| ||| || |||||||||||||||||||| || |||||||| || || |||||
Sbjct: 12563625 tattatagcactgtctcttgcaaagttttctcgcattgtgttaccaattgccccttctga 12563566
Query: 1297 agttctgatccttagagataacagtttctgcacaaggaacaagcaagggagtattgttcg 1356
|||| || | ||||||||||||||||||||| |||||||||||||||| ||| |||||
Sbjct: 12563565 agttttggtgcttagagataacagtttctgcctgaggaacaagcaagggactatagttcg 12563506
Query: 1357 tcctggcatgcagtcaattaatgaatctgaagaaatcaagaagggtgtaatggaattcta 1416
||||| || || ||||| ||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 12563505 ccctgggatccaatcaatgaatgaatctgaagaagtcaagaagggggtaatggaattcta 12563446
Query: 1417 caaggtggctcttgtgcccgagctagcaaaattcctggatgaatccctgcctccgtggca 1476
|| || |||||||| || ||||||||||| |||||||||| |||| ||||||| ||| |
Sbjct: 12563445 cagggcagctcttgttccagagctagcaaacttcctggatgcatccatgcctccatggaa 12563386
Query: 1477 agaatgggtggagaacttggaccacttcaccagcataccagattctcagttggatgaagt 1536
||||||||||||||||||||||| ||||| |||||||||||| | ||| |||| |||||
Sbjct: 12563385 agaatgggtggagaacttggaccgattcacgagcataccagatccacagctggaggaagt 12563326
Query: 1537 taggacagcttatcgagcatggaaagacgattacgaccgggtaaaaatggc 1587
||||| |||||| | | ||||||| || |||||||| |||||||||||
Sbjct: 12563325 taggagcgcttatagggtgtggaaagcggactacgaccgagtaaaaatggc 12563275
Score = 172 bits (87), Expect = 3e-39
Identities = 135/151 (89%)
Strand = Plus / Minus
Query: 484 ggtacattcactggctacaatgatctcacttaagatggaaatccctgatcgagcatggga 543
||||||||||||||| ||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 12565723 ggtacattcactggccacaatgatctctctgaaaatggaaatccctgatcgagcatggga 12565664
Query: 544 gaaggatcctgatggcattgctcttgcgaactttattaactcgaatttaccagataatat 603
||| ||||||||||||||||||||| | ||||| |||||||| ||||| ||||| ||| |
Sbjct: 12565663 gaatgatcctgatggcattgctctttcaaacttcattaactcaaatttgccagacaatgt 12565604
Query: 604 caaagttttcagtatcttgcctgctcaaagg 634
| |||||||||| | |||||||||||||||
Sbjct: 12565603 tagagttttcagtgttttgcctgctcaaagg 12565573
Score = 139 bits (70), Expect = 4e-29
Identities = 103/114 (90%)
Strand = Plus / Minus
Query: 374 attgagtcagttttggaatctgccatcttcaaggcagggggcattcttgagagtaattat 433
||||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||||
Sbjct: 12565946 attgagtcagtcttggaaacagccatcttcaaggctgggggcattcttgagagtaattat 12565887
Query: 434 ggaaagttgcaaaaagttggttgggaacggagcagccgaactgataaaggggta 487
|| ||| ||||||||||||| |||||| |||| || |||||||||||||||||
Sbjct: 12565886 gggaagctgcaaaaagttggctgggaaaggagtagtagaactgataaaggggta 12565833
Score = 133 bits (67), Expect = 3e-27
Identities = 136/159 (85%)
Strand = Plus / Minus
Query: 1022 attcaagctagatggctccatgagcctaatgacaatgatagactaagtgcatcacacttc 1081
|||| |||||| ||||| ||||||||| |||| |||||| |||| | ||| ||||| |||
Sbjct: 12564256 attcgagctaggtggcttcatgagcctgatgaaaatgatcgactgaatgcttcacatttc 12564197
Query: 1082 agagatatcctcacctgctcatgtggagagttgcagagttcatcaggagttcaatttgtg 1141
|||||||||||||| | ||| ||||||||| | |||| |||||||||| |||||||||||
Sbjct: 12564196 agagatatcctcacattctcctgtggagagctccagatttcatcaggaattcaatttgtg 12564137
Query: 1142 gaactgacgatatgtggagtatcttttatgctacatcag 1180
||| |||| |||| ||||||||||| ||||| ||||||
Sbjct: 12564136 gaattgactatatcaggagtatctttcatgctgcatcag 12564098
Score = 119 bits (60), Expect = 4e-23
Identities = 126/148 (85%)
Strand = Plus / Minus
Query: 632 aggagttttgatgtaaggagggaatgcttgtaccgggagtacttctatcttctgcctgct 691
|||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 12565479 aggagtttcgatgtgaggagggaatgcttgtatcgggaatacttgtatcttcttcctgct 12565420
Query: 692 gaaattattggaattaaaagcagttgtagctctggagaagtggaggagcacttaattgaa 751
||||| |||||||||||| | |||||||||||| |||||| ||| ||| | |||
Sbjct: 12565419 gaaataattggaattaaaggtggttgtagctctgaagaagtaatggaacacctgtcagaa 12565360
Query: 752 ttcaataacatactgaaaggttttgagg 779
||||||| ||| ||||||||||||||||
Sbjct: 12565359 ttcaatagcattctgaaaggttttgagg 12565332
Score = 107 bits (54), Expect = 1e-19
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 260 ggcgggatgaggtgggagtctacgcggaagaagagggtcgtgctccgcgtcggctacgtc 319
|||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 12566633 ggcgggatgaggtgggagtccgcgcggaagaagagggtcgtgctccgcgtaggctacgtc 12566574
Query: 320 ggcagcgaataccgaggt 337
|||| || |||||||||
Sbjct: 12566573 ggcacggagtaccgaggt 12566556
Score = 99.6 bits (50), Expect = 4e-17
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 777 agggaaaccacccatttcataattacactgctcgtgccaagtatagaaaagttctagc 834
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 12564516 agggaaaccatccatttcataattacactgctcgtgccaagtataggaaagttctagc 12564459
Score = 42.1 bits (21), Expect = 7.2
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 334 aggtcttcagaagcagcgagatctcagcg 362
|||||||||||||||||| || |||||||
Sbjct: 12566460 aggtcttcagaagcagcgggagctcagcg 12566432
>dbj|AP003256.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0460E08
Length = 170021
Score = 42.1 bits (21), Expect = 7.2
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 219 cgcctcctcctccgcctacgacctgctcc 247
||||||||||||| ||||| |||||||||
Sbjct: 116216 cgcctcctcctccccctaccacctgctcc 116244
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 344,205,289
Number of extensions: 18969868
Number of successful extensions: 369863
Number of sequences better than 10.0: 47
Number of HSP's gapped: 369862
Number of HSP's successfully gapped: 76
Length of query: 1884
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1861
Effective length of database: 18,503,978,556
Effective search space: 34435904092716
Effective search space used: 34435904092716
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)