ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf19d01 |
|---|---|
| Clone Library Name | barley_pub |
>Q9CQ48:NUDC2_MOUSE NudC domain-containing protein 2 - Mus musculus (Mouse)| Length = 157 Score = 93.2 bits (230), Expect = 2e-18 Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 3/139 (2%) Frame = +3 Query: 426 EKRHAFVHNGQKVFEWDQSLEEVNMYIELPKNVPTKLIQCVIQASHVEVGIRGHPPYLNH 605 E+R V G +W Q+LEEV + +++P + IQC +Q+ HV + + G L Sbjct: 6 EERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-ILKG 64 Query: 606 DLMLPVKTDSSFWTIEDGELH---ITLQKREKGKTWASPIKGQGSLDPYAADQEQKRLML 776 L D WT+ED ++ +T KR+ W S ++ + + DP+ DQ Q++L L Sbjct: 65 KLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTL 124 Query: 777 QRFQEENPGFDFSQAQFSG 833 +RFQ+ENPGFDFS A+ SG Sbjct: 125 ERFQKENPGFDFSGAEISG 143
>Q8WVJ2:NUDC2_HUMAN NudC domain-containing protein 2 - Homo sapiens (Human)| Length = 157 Score = 93.2 bits (230), Expect = 2e-18 Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 3/139 (2%) Frame = +3 Query: 426 EKRHAFVHNGQKVFEWDQSLEEVNMYIELPKNVPTKLIQCVIQASHVEVGIRGHPPYLNH 605 E+R V G +W Q+LEEV + +++P + IQC +Q+ HV + + G L Sbjct: 6 EERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALSVGGRE-ILKG 64 Query: 606 DLMLPVKTDSSFWTIEDGELH---ITLQKREKGKTWASPIKGQGSLDPYAADQEQKRLML 776 L D WT+ED ++ +T KR+ W S ++ + + DP+ DQ Q++L L Sbjct: 65 KLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTL 124 Query: 777 QRFQEENPGFDFSQAQFSG 833 +RFQ+ENPGFDFS A+ SG Sbjct: 125 ERFQKENPGFDFSGAEISG 143
>Q5M823:NUDC2_RAT NudC domain-containing protein 2 - Rattus norvegicus (Rat)| Length = 157 Score = 90.9 bits (224), Expect = 8e-18 Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 3/125 (2%) Frame = +3 Query: 468 EWDQSLEEVNMYIELPKNVPTKLIQCVIQASHVEVGIRGHPPYLNHDLMLPVKTDSSFWT 647 +W Q+LEEV + +++P + IQC +Q+ HV + + G L L D WT Sbjct: 20 QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-ILKGKLFDSTIADEGTWT 78 Query: 648 IEDGELH---ITLQKREKGKTWASPIKGQGSLDPYAADQEQKRLMLQRFQEENPGFDFSQ 818 +ED ++ +T KR+ W S ++ + + DP+ DQ Q++L L+RFQ+ENPGFDFS Sbjct: 79 LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 138 Query: 819 AQFSG 833 A+ SG Sbjct: 139 AEISG 143
>Q5ZIN1:NUDC_CHICK Nuclear migration protein nudC - Gallus gallus (Chicken)| Length = 341 Score = 59.7 bits (143), Expect = 2e-08 Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 38/160 (23%) Frame = +3 Query: 465 FEWDQSLEEVNMYI--ELPKNVPTKLIQCVIQASHVEVGIRGHPPYLNHDLMLPVKTDSS 638 + W Q+L E+++ I ++ + K + IQ + VG++GHPP ++ +L VK + S Sbjct: 182 YRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQRRRLRVGLKGHPPVIDGELFNEVKVEES 241 Query: 639 FWTIEDGE-LHITLQKREKGKTWASPI--------------------------------- 716 W IEDG+ + + L+K K + W + Sbjct: 242 SWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMM 301 Query: 717 --KGQGSLDPYAADQEQKRLMLQRFQEENPGFDFSQAQFS 830 + Q S+ +D+++K+ +L++F E++P DFS+A+F+ Sbjct: 302 YDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN 341
>Q9Y266:NUDC_HUMAN Nuclear migration protein nudC - Homo sapiens (Human)| Length = 331 Score = 57.4 bits (137), Expect = 1e-07 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 38/160 (23%) Frame = +3 Query: 465 FEWDQSLEEVNMYIELPKNVPTKLIQCV--IQASHVEVGIRGHPPYLNHDLMLPVKTDSS 638 + W Q+L E+++ + N K V IQ H+ VG++G P ++ +L VK + S Sbjct: 172 YRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGELYNEVKVEES 231 Query: 639 FWTIEDGE-LHITLQKREKGKTWASPIKG------------------------------- 722 W IEDG+ + + L+K K + W+ + Sbjct: 232 SWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLDSETRSMVEKMM 291 Query: 723 ----QGSLDPYAADQEQKRLMLQRFQEENPGFDFSQAQFS 830 Q S+ +D+++K+ +L++F +++P DFS+A+F+ Sbjct: 292 YDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 331
>O35685:NUDC_MOUSE Nuclear migration protein nudC - Mus musculus (Mouse)| Length = 332 Score = 56.6 bits (135), Expect = 2e-07 Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 38/160 (23%) Frame = +3 Query: 465 FEWDQSLEEVNMYIELPKNVPTKLIQCV--IQASHVEVGIRGHPPYLNHDLMLPVKTDSS 638 + W Q+L E+++ + + K V IQ H+ VG++G PP ++ +L VK + S Sbjct: 173 YRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEES 232 Query: 639 FWTIEDGE-LHITLQKREKGKTWASPI--------------------------------- 716 W IEDG+ + + L+K K + W + Sbjct: 233 SWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMM 292 Query: 717 --KGQGSLDPYAADQEQKRLMLQRFQEENPGFDFSQAQFS 830 + Q S+ +D+++K+ +L++F +++P DFS+A+F+ Sbjct: 293 YDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332
>Q63525:NUDC_RAT Nuclear migration protein nudC - Rattus norvegicus (Rat)| Length = 332 Score = 54.3 bits (129), Expect = 9e-07 Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 38/160 (23%) Frame = +3 Query: 465 FEWDQSLEEVNMYIELPKNVPTKLIQCV--IQASHVEVGIRGHPPYLNHDLMLPVKTDSS 638 + W Q+L E+++ + + K V IQ H+ VG++G P ++ +L VK + S Sbjct: 173 YRWTQTLSELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQAPVIDGELYNEVKVEES 232 Query: 639 FWTIEDGE-LHITLQKREKGKTWASPI--------------------------------- 716 W IEDG+ + + L+K K + W + Sbjct: 233 SWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMM 292 Query: 717 --KGQGSLDPYAADQEQKRLMLQRFQEENPGFDFSQAQFS 830 + Q S+ +D+++K+ +L++F +++P DFS+A+F+ Sbjct: 293 YDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332
>Q04906:BMP6_RAT Bone morphogenetic protein 6 precursor - Rattus norvegicus (Rat)| Length = 506 Score = 37.7 bits (86), Expect = 0.083 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = -3 Query: 555 PGSHTESAWWARSWGARCTCSPPPATGPIRKPSAHCGRR---HGASRVPASPPWPRDSA 388 PG + W WG C+C PPP P+ +A G + G S V A P P+ S+ Sbjct: 2 PGLGRRAQWLCWWWGLLCSCGPPPLRPPLPVAAAAAGGQLLGAGGSPVRAEQPPPQSSS 60
>P20722:BMP6_MOUSE Bone morphogenetic protein 6 precursor - Mus musculus (Mouse)| Length = 510 Score = 37.7 bits (86), Expect = 0.083 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = -3 Query: 555 PGSHTESAWWARSWGARCTCSPPPATGPIRKPSAHCGRR---HGASRVPASPPWPRDSA 388 PG + W WG C+C PPP P+ +A G + G S V A P P+ S+ Sbjct: 2 PGLGRRAQWLCWWWGLLCSCGPPPLRPPLPVAAAAAGGQLLGAGGSPVRAEQPPPQSSS 60
>Q8WXE0:CSKI2_HUMAN Caskin-2 - Homo sapiens (Human)| Length = 1202 Score = 31.2 bits (69), Expect(2) = 0.084 Identities = 23/61 (37%), Positives = 29/61 (47%) Frame = +3 Query: 243 STTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQSLEASGAPNPAAMAERLA 422 ++ P P+ P S T E P A+S LPQP EP SL A G P P A + + Sbjct: 1012 ASATPGPAAPLP--SPTPGESPPASS----LPQP-----EPSSLPAQGVPTPLAPSPAMQ 1060 Query: 423 P 425 P Sbjct: 1061 P 1061 Score = 25.4 bits (54), Expect(2) = 0.084 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Frame = +1 Query: 34 GDPVARG*PFEECIFPNRNNLLLGQRRPPTGQILR-APAPP 153 G P +RG E F NL + QR P G R P PP Sbjct: 938 GTPPSRGSSGEGLPFAEEGNLTIKQRPKPAGPPPRETPVPP 978
>Q8R1N4:NUDC3_MOUSE NudC domain-containing protein 3 - Mus musculus (Mouse)| Length = 363 Score = 35.4 bits (80), Expect = 0.41 Identities = 31/162 (19%), Positives = 67/162 (41%), Gaps = 12/162 (7%) Frame = +3 Query: 369 SLEASGAPNPAAMAERLAPEKRHAFVHNG--QKVFEWDQSLEEVNMYIELPKNVPT-KLI 539 S A G +P + +++ +NG ++ + W Q ++ + + +PK+V K + Sbjct: 158 SSAAEGPKDPPVLPRIQEQFQKNPDSYNGAIRENYIWSQDYTDLEVRVPVPKHVMKGKQV 217 Query: 540 QCVIQASHVEVGI---RGHPPYLNHDLMLPVKTDSSFWTIEDGELHITLQKREKGKTWAS 710 + + + V + G + L + T+SS W++E G + + W++ Sbjct: 218 SVALSSGTIRVAMVEENGERVLMEGKLTHKINTESSLWSLEPGRCVLVNLSKVGEYWWSA 277 Query: 711 PIKGQGSLDPYAADQEQKRLMLQRFQEENPG------FDFSQ 818 ++G+ +P D+ K + EE FD+ Q Sbjct: 278 ILEGE---EPIDIDKINKERSMATVDEEEQAVLDRLTFDYHQ 316
>Q8TAX7:MUC7_HUMAN Mucin-7 precursor - Homo sapiens (Human)| Length = 377 Score = 35.0 bits (79), Expect = 0.54 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Frame = +3 Query: 219 SASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQSLEASGAPN- 395 +A+ P ++TTQ PS PP + + P A + P P SSA P++ A P+ Sbjct: 189 TAAPPTPSATTQAPPSSSAPPETTAAPPTPPATT-----PAPPSSSAPPETTAAPPTPSA 243 Query: 396 --PAAMAERLAPE 428 PA ++ PE Sbjct: 244 TTPAPLSSSAPPE 256 Score = 32.7 bits (73), Expect = 2.7 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +3 Query: 219 SASSPPRTSTTQPNPSCRRP-P*SLTSREWPSAASFILRLPQPSRSSAEPQSLEASGAP 392 SAS+PP T+ P PS P P S + + +AA + P S ++ P + E S AP Sbjct: 273 SASAPPETTAAPPTPSATTPAPPSSPAPQETTAAP--ITTPNSSPTTLAPDTSETSAAP 329
>Q5N0A5:IF2_SYNP6 Translation initiation factor IF-2 - Synechococcus sp. (strain ATCC| 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) Length = 1030 Score = 34.7 bits (78), Expect = 0.70 Identities = 25/82 (30%), Positives = 38/82 (46%) Frame = +3 Query: 219 SASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQSLEASGAPNP 398 +AS+ P S ++P P+ P + T + P+AA + + RS A+P+ S AP P Sbjct: 154 AASAEPAKSPSRPAPAATPRPVAETKKPKPAAAELLRKPEIVRRSEAKPE--RTSEAPTP 211 Query: 399 AAMAERLAPEKRHAFVHNGQKV 464 ER + A GQ V Sbjct: 212 RPKIERRPEQTGPARPQLGQPV 233
>Q6AXN0:F100A_RAT Protein FAM100A - Rattus norvegicus (Rat)| Length = 176 Score = 33.5 bits (75), Expect = 1.6 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = +3 Query: 213 GWSASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQ-SLEASGA 389 G S+ SP TS T P P S + WP+AAS P +PQ L Sbjct: 93 GGSSGSPMATSATSPPPHFPHATGSFATPSWPTAAS-----PPGGPQHLQPQPPLWTPAP 147 Query: 390 PNPAAMAERLAPEK 431 P+P + LAP++ Sbjct: 148 PSPTSDWPPLAPQQ 161
>Q6P3B2:F100A_MOUSE Protein FAM100A - Mus musculus (Mouse)| Length = 176 Score = 33.5 bits (75), Expect = 1.6 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = +3 Query: 213 GWSASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQ-SLEASGA 389 G +SSP TS T P P S + WP+AAS P +PQ L Sbjct: 93 GGGSSSPMATSATSPPPHFPHATGSFATPSWPTAAS-----PPGGPQQHQPQPPLWTPAP 147 Query: 390 PNPAAMAERLAPEK 431 P+P + LAP++ Sbjct: 148 PSPTSDWPPLAPQQ 161
>P15613:YM12_PARTE Uncharacterized mitochondrial protein ORF12 - Paramecium| tetraurelia Length = 265 Score = 33.1 bits (74), Expect = 2.0 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +1 Query: 112 RPPTGQILRAPAPPATS-GDIYVLLSTSSTNPLRLVGPPPALHVH 243 R PT + LR PAP +S + +LL + +T PL+ + PP +L +H Sbjct: 217 RLPTRRTLRKPAPTQSSMSRLCILLFSLTTPPLKKLRPPLSLRLH 261
>O14526:FCHO1_HUMAN FCH domain only protein 1 - Homo sapiens (Human)| Length = 889 Score = 33.1 bits (74), Expect = 2.0 Identities = 32/89 (35%), Positives = 34/89 (38%), Gaps = 11/89 (12%) Frame = +3 Query: 201 SPSLGWSASSP----PRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQ 368 SPS SP PR T Q PSCR PP P PQP SS P Sbjct: 479 SPSHAAPGPSPDSWVPRPGTPQSPPSCRAPPPEARGIRAPPLPD----SPQPLASSPGPW 534 Query: 369 SLEASG------AP-NPAAMAERLAPEKR 434 LEA AP +P A AP +R Sbjct: 535 GLEALAGGDLMPAPADPTAREGLAAPPRR 563
>Q2L2H1:EFG1_BORA1 Elongation factor G 1 - Bordetella avium (strain 197N)| Length = 700 Score = 33.1 bits (74), Expect = 2.0 Identities = 20/63 (31%), Positives = 31/63 (49%) Frame = +3 Query: 645 TIEDGELHITLQKREKGKTWASPIKGQGSLDPYAADQEQKRLMLQRFQEENPGFDFSQAQ 824 T+ D + H+TL++ E + P+ Q ADQE+ L L R +E+P F + Sbjct: 394 TLCDIDAHVTLERME----FPEPVISQAVEPKSKADQEKMGLALSRLAQEDPSFRVRSDE 449 Query: 825 FSG 833 SG Sbjct: 450 ESG 452
>P17059:CRTD_RHOCA Methoxyneurosporene dehydrogenase - Rhodobacter capsulatus| (Rhodopseudomonas capsulata) Length = 494 Score = 33.1 bits (74), Expect = 2.0 Identities = 21/66 (31%), Positives = 30/66 (45%) Frame = +2 Query: 302 VAFCGIFYSPSPSTIAFLSRATISRSIGSAESRGHGGEAGTREAPCLRPQWAEGFRMGPV 481 +A G+ +SP P T A + A +SR + +GG A RP G + + Sbjct: 401 LAAMGLTFSPDPETRALTTPALLSRRFPGSLGAIYGGSPEGTLATFRRPLARTGLKGLYL 460 Query: 482 AGGGEH 499 AGGG H Sbjct: 461 AGGGTH 466
>P29536:LMOD1_HUMAN Leiomodin-1 - Homo sapiens (Human)| Length = 572 Score = 32.7 bits (73), Expect = 2.7 Identities = 26/80 (32%), Positives = 35/80 (43%) Frame = -3 Query: 513 GARCTCSPPPATGPIRKPSAHCGRRHGASRVPASPPWPRDSALPMLLEIVARLRNAMVEG 334 GA SP P+ P KPS + G + PA+PP P P L I+ L+N++ Sbjct: 474 GAVAKGSPKPSPQPSPKPSPKNSPKKGGA--PAAPPPPPPPLAPPL--IMENLKNSLSPA 529 Query: 333 DGE*KMPQKATPAMSTTKED 274 + KM K PA D Sbjct: 530 T-QRKMGDKVLPAQEKNSRD 548
>O43426:SYNJ1_HUMAN Synaptojanin-1 - Homo sapiens (Human)| Length = 1575 Score = 32.3 bits (72), Expect = 3.5 Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 13/91 (14%) Frame = +3 Query: 201 SPSLGWSASSPPRTSTTQ-------PNPSCRRPP*SLTSREW--PSAASFIL----RLPQ 341 S LG S SS PRTS Q P PS P SR PSA S + P Sbjct: 1035 SSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPL 1094 Query: 342 PSRSSAEPQSLEASGAPNPAAMAERLAPEKR 434 P + A+P + P P A R AP +R Sbjct: 1095 PQKDPAQPLEPKRPPPPRPVAPPTRPAPPQR 1125
>Q70M86:STRN_SORMA Striatin Pro11 - Sordaria macrospora| Length = 845 Score = 32.3 bits (72), Expect = 3.5 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 216 WSASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEP 365 W+ S+PP+ ++ QP P R P + S ++F PQP+ +S P Sbjct: 585 WAVSAPPQLTSPQPGPGRRGPGGRVRGNSMSSGSAF-PSSPQPTTASNSP 633
>Q9BUH8:BEGIN_HUMAN Brain-enriched guanylate kinase-associated protein - Homo sapiens| (Human) Length = 593 Score = 32.3 bits (72), Expect = 3.5 Identities = 22/55 (40%), Positives = 29/55 (52%) Frame = +3 Query: 339 QPSRSSAEPQSLEASGAPNPAAMAERLAPEKRHAFVHNGQKVFEWDQSLEEVNMY 503 Q SR S EP S+EAS +PAA RL+P++ AF G SL + +Y Sbjct: 539 QGSRDSLEPSSMEASPEMHPAA---RLSPQQ--AFPRTGGSGLSRKDSLTKAQLY 588
>P20186:YT35_STRFR Hypothetical 35.5 kDa protein in transposon Tn4556 - Streptomyces| fradiae Length = 348 Score = 29.6 bits (65), Expect(2) = 4.0 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 2/67 (2%) Frame = +3 Query: 222 ASSPPRTSTTQPNPSCRRPP*S--LTSREWPSAASFILRLPQPSRSSAEPQSLEASGAPN 395 A PP +S + P + P + L R PSA R +P +A P G P Sbjct: 234 APRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPARPPIPAARPPPRRTPGTPR 293 Query: 396 PAAMAER 416 PAA R Sbjct: 294 PAAARAR 300 Score = 21.2 bits (43), Expect(2) = 4.0 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +1 Query: 124 GQILRAPAPPATS 162 G +L AP PPA+S Sbjct: 229 GSLLPAPRPPASS 241
>Q96RN5:PCQAP_HUMAN Positive cofactor 2 glutamine/Q-rich-associated protein - Homo| sapiens (Human) Length = 788 Score = 32.0 bits (71), Expect = 4.6 Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 7/119 (5%) Frame = +3 Query: 201 SPSLGWSASSP-----PRTSTTQPNPSCRRPP*SLTSREWPSAASFI-LRLPQPSRSSAE 362 SPS G +P P + QP +P +++S PS +SF+ PQPS+S Sbjct: 435 SPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVT 494 Query: 363 PQSLEASGAPNPAAMAERLAPEKRHAFVHNGQ-KVFEWDQSLEEVNMYIELPKNVPTKL 536 ++ + P+P + + P + + Q + ++ L++++ YIE + + K+ Sbjct: 495 ARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKI 553
>O13712:MUG61_SCHPO Meiotically up-regulated gene 61 protein - Schizosaccharomyces| pombe (Fission yeast) Length = 844 Score = 32.0 bits (71), Expect = 4.6 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = +2 Query: 290 DIAGVAFCGIFYSPSPSTIAFLSRATISRSIGSAESRGH--GGEAGTREAP 436 ++ V FCG+ P PS++ +L + SI SA S H G EA + P Sbjct: 482 EVQRVGFCGVPAEPYPSSLYYLQPGVLRSSIESAYSFAHSLGIEASCQPCP 532
>Q7SIG6:DDEF2_MOUSE Development and differentiation-enhancing factor 2 - Mus musculus| (Mouse) Length = 958 Score = 32.0 bits (71), Expect = 4.6 Identities = 23/72 (31%), Positives = 33/72 (45%) Frame = +3 Query: 219 SASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQSLEASGAPNP 398 S SS P TS ++P P +PP L ++ S P P + +P+ EASG + Sbjct: 822 SKSSQPGTSQSKPPPLPPQPPSRLPQKKPASGTD----KPTPLTNKGQPRGPEASGPLSN 877 Query: 399 AAMAERLAPEKR 434 A + AP R Sbjct: 878 AMALQPPAPMPR 889
>Q8HXL3:WDR62_PIG WD repeat protein 62 - Sus scrofa (Pig)| Length = 1541 Score = 31.6 bits (70), Expect = 5.9 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -3 Query: 495 SPPPATGPIRKPSAHCGRRHGASRVPASPPWPRDSALPMLLEIVARLRNAMVE 337 S P A P+ + HCG+ RVPA P P L + IV RL+ A E Sbjct: 1399 SAPDALSPVHRCPGHCGQ----PRVPARVPPPGPLELSNVGSIVHRLQTAFQE 1447
>P03186:TEGU_EBV Large tegument protein - Epstein-Barr virus (strain B95-8) (HHV-4)| (Human herpesvirus 4) Length = 3149 Score = 31.6 bits (70), Expect = 5.9 Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 25/104 (24%) Frame = +3 Query: 201 SPSLGWSASSPPRTSTTQPNPSCRRPP*SLT---------SREWPSAA---SFILRLPQP 344 +PS +A++ P T+T P P+ ++PP S + PSAA S +L QP Sbjct: 520 TPSPSPTAAAAPTTTTLSPPPTQQQPPQSAAPAPSPLLPQQQPTPSAAPAPSPLLPQQQP 579 Query: 345 SRSSAEPQS---------LEASGAPNPAAM----AERLAPEKRH 437 S+A S A+ AP PA A L PEK H Sbjct: 580 PPSAARAPSPLPPQQQPLPSATPAPPPAQQLPPSATTLEPEKNH 623
>Q5M775:SPEC1_HUMAN Sperm antigen with calponin homology and coiled-coil domains 1 - Homo| sapiens (Human) Length = 1068 Score = 31.6 bits (70), Expect = 5.9 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = +3 Query: 204 PSLGWSASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASF-ILRLPQPSRSSAEPQSLEA 380 P L S RT T +P+P R+ P SL S P + F RL S + +PQS + Sbjct: 888 PDLPLSDILKGRTETLKPDPHLRKSP-SLESLSRPPSLGFGDTRLLSASTRAWKPQSKLS 946 Query: 381 SGAPNP-AAMAERLAPEKRHAFVHNGQK 461 +P AA+A KR+A + QK Sbjct: 947 VERKDPLAALAREYGGSKRNALLKWCQK 974
>P14328:SP96_DICDI Spore coat protein SP96 - Dictyostelium discoideum (Slime mold)| Length = 600 Score = 31.6 bits (70), Expect = 5.9 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = +3 Query: 201 SPSLGWSASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQSLEA 380 SPS ++SSP ++++ +PS S +S PS+++ P S SS+ S A Sbjct: 477 SPSSSAASSSPSSSASSSSSPSS-----SASSSSAPSSSASSSSAPSSSASSSSASSSSA 531 Query: 381 SGAPNPAA 404 S A AA Sbjct: 532 SSAATTAA 539
>Q8ND99:CS016_HUMAN Uncharacterized protein C19orf16 - Homo sapiens (Human)| Length = 567 Score = 31.6 bits (70), Expect = 5.9 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +3 Query: 204 PSLGWSASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSR--SSAEPQSLE 377 P +AS+PPR + P PS + P S++ P+ +P PSR S+A + Sbjct: 92 PQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPA-------IPAPSRKASAASASPRK 144 Query: 378 ASGAPNP 398 AS P P Sbjct: 145 ASAVPAP 151
>O60885:BRD4_HUMAN Bromodomain-containing protein 4 - Homo sapiens (Human)| Length = 1362 Score = 31.6 bits (70), Expect = 5.9 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +3 Query: 222 ASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQSLE 377 AS+PP+T T QPNP PP T +P+ ++ + P + PQ L+ Sbjct: 202 ASTPPQTQTPQPNP----PPVQATPHPFPAVTPDLI-VQTPVMTVVPPQPLQ 248
>Q2IL14:NUOI2_ANADE NADH-quinone oxidoreductase subunit I 2 - Anaeromyxobacter| dehalogenans (strain 2CP-C) Length = 264 Score = 31.2 bits (69), Expect = 7.8 Identities = 20/73 (27%), Positives = 31/73 (42%) Frame = +3 Query: 207 SLGWSASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQSLEASG 386 ++ W S+P P P+ +P P+AA+ P + +A P + + Sbjct: 176 TMAWDRSAPQFLPPEPPKPAEAKPAAKAAPAAKPAAAA--PAAPAAAAPAAAPAPAKPAA 233 Query: 387 APNPAAMAERLAP 425 AP PAA A AP Sbjct: 234 APAPAAAAAPAAP 246
>Q03252:LMNB2_HUMAN Lamin-B2 - Homo sapiens (Human)| Length = 600 Score = 31.2 bits (69), Expect = 7.8 Identities = 24/73 (32%), Positives = 33/73 (45%) Frame = +2 Query: 326 SPSPSTIAFLSRATISRSIGSAESRGHGGEAGTREAPCLRPQWAEGFRMGPVAGGGEHVH 505 SPSPS+ +SRAT S S GS + G G + + P + +G GG H Sbjct: 385 SPSPSSRVTVSRAT-SSSSGSLSATGRLGRSKRKRLEVEEPLGSGPSVLGTGTGGSGGFH 443 Query: 506 RAPQERAHQADSV 544 A Q A + S+ Sbjct: 444 LAQQASASGSVSI 456
>Q9BQ89:F110A_HUMAN Protein FAM110A - Homo sapiens (Human)| Length = 295 Score = 31.2 bits (69), Expect = 7.8 Identities = 19/45 (42%), Positives = 20/45 (44%) Frame = -3 Query: 492 PPPATGPIRKPSAHCGRRHGASRVPASPPWPRDSALPMLLEIVAR 358 PPPAT P PS RR +PASP P S P AR Sbjct: 136 PPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
>Q76KP1:B4GN4_HUMAN N-acetyl-beta-glucosaminyl-glycoprotein| 4-beta-N-acetylgalactosaminyltransferase 1 - Homo sapiens (Human) Length = 1039 Score = 31.2 bits (69), Expect = 7.8 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -3 Query: 501 TCSPPPATGPIRKPSAHCGRRHGASRVPASPPWPRDSALP 382 T + PP +GP + P+ + GA+ P +PP PRD P Sbjct: 450 TEAAPPRSGP-QSPAPAAPAQPGATLAPPTPPRPRDGGTP 488
>O14497:ARI1A_HUMAN AT-rich interactive domain-containing protein 1A - Homo sapiens| (Human) Length = 2285 Score = 31.2 bits (69), Expect = 7.8 Identities = 28/89 (31%), Positives = 38/89 (42%) Frame = +3 Query: 198 KSPSLGWSASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQSLE 377 + P G SA PP T +P PS +PP S+ + +PQ S Sbjct: 1551 RQPPYGPSAPVPPMT---RPPPSNYQPPPSMQN-----------HIPQVS---------- 1586 Query: 378 ASGAPNPAAMAERLAPEKRHAFVHNGQKV 464 S AP P M R +P K F+H+G K+ Sbjct: 1587 -SPAPLPRPMENRTSPSK-SPFLHSGMKM 1613
>Q96AP0:ACD_HUMAN Adrenocortical dysplasia protein homolog - Homo sapiens (Human)| Length = 544 Score = 31.2 bits (69), Expect = 7.8 Identities = 21/65 (32%), Positives = 31/65 (47%) Frame = +3 Query: 204 PSLGWSASSPPRTSTTQPNPSCRRPP*SLTSREWPSAASFILRLPQPSRSSAEPQSLEAS 383 P+L +A P + S++QP+P+ P +LT R P A+ R P S P S Sbjct: 384 PALSLAAPDPGQRSSSQPSPAICSAPATLTPRS-PHAS----RTPSSPLQSCTPSLSPRS 438 Query: 384 GAPNP 398 P+P Sbjct: 439 HVPSP 443 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 205,308,040 Number of extensions: 4894869 Number of successful extensions: 15738 Number of sequences better than 10.0: 39 Number of HSP's gapped: 15666 Number of HSP's successfully gapped: 42 Length of query: 360 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 246 Effective length of database: 69,416,809 Effective search space: 17076535014 Effective search space used: 17076535014 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
