ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf22j01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK120598:Os07g0435300 | 110 | 1e-24 | 2 | AK062594:Os07g0187900 | 28 | 4.2 | 3 | AK099882:Os10g0456500 | 28 | 5.5 | 4 | AK066867:Os10g0456500 | 28 | 5.5 | 5 | AK062590:Os06g0593800 | 28 | 5.5 | 6 | AK107247: | 28 | 7.2 | 7 | AK108273:Os03g0189900 | 28 | 7.2 | 8 | Os04g0504600:Os04g0504600 | 27 | 9.4 | 9 | AK105898:Os08g0263300 | 27 | 9.4 | 10 | AK101502:Os02g0125700 | 27 | 9.4 | 11 | AK071006:Os02g0125700 | 27 | 9.4 | 12 | AK067503:Os08g0263300 | 27 | 9.4 | 13 | AK063542:Os06g0710800 | 27 | 9.4 |
|---|
>AK120598:Os07g0435300 | Length = 79 Score = 110 bits (274), Expect = 1e-24 Identities = 52/53 (98%), Positives = 53/53 (100%) Frame = +2 Query: 326 ILRRESYWYNGTGSVVTVDQDPNTRYPVVVRFAKVNYAGVSTNNYALDEIKEV 484 ILRRESYWYNGTGSVVTVDQDPNTRYPVVVRFAKVNYAGVSTNNYALDEI+EV Sbjct: 26 ILRRESYWYNGTGSVVTVDQDPNTRYPVVVRFAKVNYAGVSTNNYALDEIQEV 78
>AK062594:Os07g0187900 | Length = 253 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = -1 Query: 515 STRQPRSFKQQPP*S-RPGRSCWSTRRRSSPWRNAPPPGNGCWDPDQP*RRIQSRC 351 ++R P S + PP S R RSCWS R S R G+ P R + + C Sbjct: 164 ASRSPSSSSRLPPCSARSSRSCWSGGRGDST-RGTSTRGSATATAPSPEREVTAGC 218
>AK099882:Os10g0456500 | Length = 845 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = -1 Query: 524 IGLSTRQPRSFKQQPP*SRPGR-SCWSTRRRSSPWRNAPPPG 402 + + P S+ + P + G CW R +P R A PPG Sbjct: 689 LAFTAPHPNSYNRIQPNTWSGAYQCWGKENREAPLRTACPPG 730
>AK066867:Os10g0456500 | Length = 845 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = -1 Query: 524 IGLSTRQPRSFKQQPP*SRPGR-SCWSTRRRSSPWRNAPPPG 402 + + P S+ + P + G CW R +P R A PPG Sbjct: 689 LAFTAPHPNSYNRIQPNTWSGAYQCWGKENREAPLRTACPPG 730
>AK062590:Os06g0593800 | Length = 469 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +1 Query: 325 DPEEGVLLVQRDWIRRHG*SGSQHPLPGG-GAFRQGELRRRVDQQLRPG 468 D + LV+RDW G + + GG G R ELRRRV++ + G Sbjct: 385 DQQMNARLVERDWR-----VGVRAEVDGGDGVLRAAELRRRVEEVMGDG 428
>AK107247: | Length = 418 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +2 Query: 29 TAPAAVPMASTNMASATSRFMLAAGIPSGANGGVSSRVS 145 +APAA AS+ +S +S + G SGA+ G SS S Sbjct: 119 SAPAASAPASSGSSSDSSSGASSGGASSGASAGASSGAS 157
>AK108273:Os03g0189900 | Length = 248 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = +1 Query: 391 QHPLPGGGAFRQGELRRRVD-QQLRPGRDQGGCCLND 498 +HP R G LRR D +Q R R++G C L D Sbjct: 84 RHPAEAAHVGRDGGLRRHADGRQRRKRRERGRCRLQD 120
>Os04g0504600:Os04g0504600 | Length = 503 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -1 Query: 482 PP*SRPGRSCWST-RRRSSPWRNA 414 PP S P +C S+ RRR+SPW A Sbjct: 17 PPASLPSTACTSSSRRRASPWGGA 40
>AK105898:Os08g0263300 | Length = 119 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +2 Query: 23 PQTAPAAVPMASTNMASATSRFMLAAGIPSG--ANGGVSSRVSFLPSNRLGLK 175 P PA + +S +RF AA P+G V S SFLP RL ++ Sbjct: 28 PSPGPARIHRRRGEESSVLNRFSSAAVAPAGFVVRMTVGSLPSFLPQRRLHIR 80
>AK101502:Os02g0125700 | Length = 143 Score = 27.3 bits (59), Expect = 9.4 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 14/80 (17%) Frame = -1 Query: 542 RATDTNIGLSTRQPRSFKQQP---------P*SRPGRSCWS-TRRRSSPWRNAPPPGNGC 393 R++ + STR P S P P PGR W +RRR + R + PP Sbjct: 37 RSSPSPAAASTRAPTSSPSPPRASAPASASPAPPPGRPPWRLSRRRRASRRPSRPPLRPT 96 Query: 392 WDPDQP----*RRIQSRCTS 345 P +P RR + RC S Sbjct: 97 GPPSRPRSRRRRRRRPRCPS 116
>AK071006:Os02g0125700 | Length = 143 Score = 27.3 bits (59), Expect = 9.4 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 14/80 (17%) Frame = -1 Query: 542 RATDTNIGLSTRQPRSFKQQP---------P*SRPGRSCWS-TRRRSSPWRNAPPPGNGC 393 R++ + STR P S P P PGR W +RRR + R + PP Sbjct: 37 RSSPSPAAASTRAPTSSPSPPRASAPASASPAPPPGRPPWRLSRRRRASRRPSRPPLRPT 96 Query: 392 WDPDQP----*RRIQSRCTS 345 P +P RR + RC S Sbjct: 97 GPPSRPRSRRRRRRRPRCPS 116
>AK067503:Os08g0263300 | Length = 102 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +2 Query: 23 PQTAPAAVPMASTNMASATSRFMLAAGIPSG--ANGGVSSRVSFLPSNRLGLK 175 P PA + +S +RF AA P+G V S SFLP RL ++ Sbjct: 28 PSPGPARIHRRRGEESSVLNRFSSAAVAPAGFVVRMTVGSLPSFLPQRRLHIR 80
>AK063542:Os06g0710800 | Length = 160 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = -1 Query: 491 KQQPP*SRPGRSCWSTRRRSSPWRNAPPPGNGCWDPDQP*RR 366 + PP + PGR R +P APPP PD RR Sbjct: 82 RDAPPRAPPGRRALQRPPRGAPLHGAPPPRRPPPPPDGRRRR 123 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,797,785 Number of extensions: 327282 Number of successful extensions: 1016 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1016 Number of HSP's successfully gapped: 13 Length of query: 222 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 125 Effective length of database: 11,515,878 Effective search space: 1439484750 Effective search space used: 1439484750 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
