ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf19c06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK119551:Os06g0704600 | 705 | 0.0 | 2 | AK101836:Os06g0704600 | 705 | 0.0 | 3 | AK065784:Os06g0704600 | 705 | 0.0 | 4 | AK105139:Os03g0101000 | 35 | 0.15 | 5 | AK100329:Os03g0288900 | 33 | 0.74 | 6 | AK100108:Os03g0722500 | 33 | 0.74 | 7 | AK099926:Os03g0722500 | 33 | 0.74 | 8 | Os04g0436000:Os04g0436000 | 30 | 3.7 | 9 | AK068239:Os02g0138200 | 30 | 3.7 | 10 | AK064810:Os02g0138200 | 30 | 3.7 | 11 | Os02g0257300:Os02g0257300 | 30 | 4.8 | 12 | AK105568:Os11g0176000 | 30 | 4.8 | 13 | AK071709:Os03g0799500 | 30 | 4.8 | 14 | Os06g0288300:Os06g0288300 | 30 | 6.3 | 15 | Os03g0227400:Os03g0227400 | 30 | 6.3 | 16 | AK110287: | 30 | 6.3 | 17 | AK073234:Os05g0291700 | 30 | 6.3 | 18 | AK072886:Os01g0249900 | 30 | 6.3 |
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>AK119551:Os06g0704600 | Length = 426 Score = 705 bits (1819), Expect = 0.0 Identities = 356/425 (83%), Positives = 373/425 (87%) Frame = +3 Query: 78 MASTVPFSPAKVQMFQATNCHGHAGFGSSFAVPRTGPRPRSVAVRVSSEQEAAATVRAPS 257 MASTV FSPA VQM Q +CHGHA FG AVPRTGPR RSVAVRVSSEQEAA VRAPS Sbjct: 1 MASTVSFSPANVQMLQGRSCHGHAAFGGCSAVPRTGPRMRSVAVRVSSEQEAAPAVRAPS 60 Query: 258 GRSIEECEADAVAGRFPAPAAFVRPKAPDGTPEIRPLDMXXXXXXXXXXXXXXXXFQETS 437 GR+IEECEADAVAGRFPAP VRPKAP+GTP+IRPLD+ FQET+ Sbjct: 61 GRTIEECEADAVAGRFPAPPPLVRPKAPEGTPQIRPLDLTKRPRRNRRSPALRAAFQETT 120 Query: 438 ISPANLVLPLFIHEREEDAPIGAMPGCFRLGWQHGLLAEVYKARDVGVNSFVLFPKVPDA 617 ISPANLVLPLFIHE E+DAPIGAMPGC+RLGW+HGLL EVYK+RDVGVNSFVLFPKVPDA Sbjct: 121 ISPANLVLPLFIHEGEDDAPIGAMPGCYRLGWRHGLLDEVYKSRDVGVNSFVLFPKVPDA 180 Query: 618 LKSPTGVEAYNDNGLVPRTIRLLKDKFPDIIVYTDVALDPYSSDGHDGIVREDGVILNDE 797 LKS +G EAYNDNGLVPRTIRLLKDKFPDI+VYTDVALDPYSSDGHDGIVREDGVI+NDE Sbjct: 181 LKSQSGDEAYNDNGLVPRTIRLLKDKFPDIVVYTDVALDPYSSDGHDGIVREDGVIMNDE 240 Query: 798 TVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIRSALDAEGFNDVSIMSYTAKYASSFYG 977 TVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIR+ALDAEGF+DVSIMSYTAKYASSFYG Sbjct: 241 TVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFHDVSIMSYTAKYASSFYG 300 Query: 978 PFREALDSNPRFGDKKTYQMNPANYRXXXXXXXXXXXXXXXILLVKPGLPYLDIIRLLRD 1157 PFREALDSNPRFGDKKTYQMNPANYR ILLVKPGLPYLD+IRLLRD Sbjct: 301 PFREALDSNPRFGDKKTYQMNPANYREALLETAADEAEGADILLVKPGLPYLDVIRLLRD 360 Query: 1158 NSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGADVILTYFARQAAAVL 1337 NSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGAD+ILTYFARQAA VL Sbjct: 361 NSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGADIILTYFARQAANVL 420 Query: 1338 CGMGS 1352 CGM S Sbjct: 421 CGMRS 425
>AK101836:Os06g0704600 | Length = 426 Score = 705 bits (1819), Expect = 0.0 Identities = 356/425 (83%), Positives = 373/425 (87%) Frame = +3 Query: 78 MASTVPFSPAKVQMFQATNCHGHAGFGSSFAVPRTGPRPRSVAVRVSSEQEAAATVRAPS 257 MASTV FSPA VQM Q +CHGHA FG AVPRTGPR RSVAVRVSSEQEAA VRAPS Sbjct: 1 MASTVSFSPANVQMLQGRSCHGHAAFGGCSAVPRTGPRMRSVAVRVSSEQEAAPAVRAPS 60 Query: 258 GRSIEECEADAVAGRFPAPAAFVRPKAPDGTPEIRPLDMXXXXXXXXXXXXXXXXFQETS 437 GR+IEECEADAVAGRFPAP VRPKAP+GTP+IRPLD+ FQET+ Sbjct: 61 GRTIEECEADAVAGRFPAPPPLVRPKAPEGTPQIRPLDLTKRPRRNRRSPALRAAFQETT 120 Query: 438 ISPANLVLPLFIHEREEDAPIGAMPGCFRLGWQHGLLAEVYKARDVGVNSFVLFPKVPDA 617 ISPANLVLPLFIHE E+DAPIGAMPGC+RLGW+HGLL EVYK+RDVGVNSFVLFPKVPDA Sbjct: 121 ISPANLVLPLFIHEGEDDAPIGAMPGCYRLGWRHGLLDEVYKSRDVGVNSFVLFPKVPDA 180 Query: 618 LKSPTGVEAYNDNGLVPRTIRLLKDKFPDIIVYTDVALDPYSSDGHDGIVREDGVILNDE 797 LKS +G EAYNDNGLVPRTIRLLKDKFPDI+VYTDVALDPYSSDGHDGIVREDGVI+NDE Sbjct: 181 LKSQSGDEAYNDNGLVPRTIRLLKDKFPDIVVYTDVALDPYSSDGHDGIVREDGVIMNDE 240 Query: 798 TVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIRSALDAEGFNDVSIMSYTAKYASSFYG 977 TVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIR+ALDAEGF+DVSIMSYTAKYASSFYG Sbjct: 241 TVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFHDVSIMSYTAKYASSFYG 300 Query: 978 PFREALDSNPRFGDKKTYQMNPANYRXXXXXXXXXXXXXXXILLVKPGLPYLDIIRLLRD 1157 PFREALDSNPRFGDKKTYQMNPANYR ILLVKPGLPYLD+IRLLRD Sbjct: 301 PFREALDSNPRFGDKKTYQMNPANYREALLETAADEAEGADILLVKPGLPYLDVIRLLRD 360 Query: 1158 NSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGADVILTYFARQAAAVL 1337 NSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGAD+ILTYFARQAA VL Sbjct: 361 NSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGADIILTYFARQAANVL 420 Query: 1338 CGMGS 1352 CGM S Sbjct: 421 CGMRS 425
>AK065784:Os06g0704600 | Length = 426 Score = 705 bits (1819), Expect = 0.0 Identities = 356/425 (83%), Positives = 373/425 (87%) Frame = +3 Query: 78 MASTVPFSPAKVQMFQATNCHGHAGFGSSFAVPRTGPRPRSVAVRVSSEQEAAATVRAPS 257 MASTV FSPA VQM Q +CHGHA FG AVPRTGPR RSVAVRVSSEQEAA VRAPS Sbjct: 1 MASTVSFSPANVQMLQGRSCHGHAAFGGCSAVPRTGPRMRSVAVRVSSEQEAAPAVRAPS 60 Query: 258 GRSIEECEADAVAGRFPAPAAFVRPKAPDGTPEIRPLDMXXXXXXXXXXXXXXXXFQETS 437 GR+IEECEADAVAGRFPAP VRPKAP+GTP+IRPLD+ FQET+ Sbjct: 61 GRTIEECEADAVAGRFPAPPPLVRPKAPEGTPQIRPLDLTKRPRRNRRSPALRAAFQETT 120 Query: 438 ISPANLVLPLFIHEREEDAPIGAMPGCFRLGWQHGLLAEVYKARDVGVNSFVLFPKVPDA 617 ISPANLVLPLFIHE E+DAPIGAMPGC+RLGW+HGLL EVYK+RDVGVNSFVLFPKVPDA Sbjct: 121 ISPANLVLPLFIHEGEDDAPIGAMPGCYRLGWRHGLLDEVYKSRDVGVNSFVLFPKVPDA 180 Query: 618 LKSPTGVEAYNDNGLVPRTIRLLKDKFPDIIVYTDVALDPYSSDGHDGIVREDGVILNDE 797 LKS +G EAYNDNGLVPRTIRLLKDKFPDI+VYTDVALDPYSSDGHDGIVREDGVI+NDE Sbjct: 181 LKSQSGDEAYNDNGLVPRTIRLLKDKFPDIVVYTDVALDPYSSDGHDGIVREDGVIMNDE 240 Query: 798 TVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIRSALDAEGFNDVSIMSYTAKYASSFYG 977 TVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIR+ALDAEGF+DVSIMSYTAKYASSFYG Sbjct: 241 TVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFHDVSIMSYTAKYASSFYG 300 Query: 978 PFREALDSNPRFGDKKTYQMNPANYRXXXXXXXXXXXXXXXILLVKPGLPYLDIIRLLRD 1157 PFREALDSNPRFGDKKTYQMNPANYR ILLVKPGLPYLD+IRLLRD Sbjct: 301 PFREALDSNPRFGDKKTYQMNPANYREALLETAADEAEGADILLVKPGLPYLDVIRLLRD 360 Query: 1158 NSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGADVILTYFARQAAAVL 1337 NSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGAD+ILTYFARQAA VL Sbjct: 361 NSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGADIILTYFARQAANVL 420 Query: 1338 CGMGS 1352 CGM S Sbjct: 421 CGMRS 425
>AK105139:Os03g0101000 | Length = 147 Score = 35.0 bits (79), Expect = 0.15 Identities = 20/49 (40%), Positives = 24/49 (48%) Frame = +3 Query: 174 PRTGPRPRSVAVRVSSEQEAAATVRAPSGRSIEECEADAVAGRFPAPAA 320 PR P PR VRV + A +R P+GR A RFPAP+A Sbjct: 77 PRRPPPPRGRGVRVEYSSDVRAPLRHPNGRR-HHLHAQLPPRRFPAPSA 124
>AK100329:Os03g0288900 | Length = 541 Score = 32.7 bits (73), Expect = 0.74 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +3 Query: 174 PRTGPRPRSVAVRVSSEQEAAATVRAPSGRSIEECEADAVAGRFPAPA 317 P P+PR A RVS +++AA +V SG ++ DA AG P A Sbjct: 150 PELDPKPRKKAQRVSFQEDAAMSVAPGSGEKVKVSTDDA-AGHTPMVA 196
>AK100108:Os03g0722500 | Length = 448 Score = 32.7 bits (73), Expect = 0.74 Identities = 13/26 (50%), Positives = 21/26 (80%) Frame = +3 Query: 864 SDMMDGRVGAIRSALDAEGFNDVSIM 941 ++M D +V A+R+ALDA+G+ DV I+ Sbjct: 236 TNMFDAQVDAVRAALDAKGYKDVEIV 261
>AK099926:Os03g0722500 | Length = 448 Score = 32.7 bits (73), Expect = 0.74 Identities = 13/26 (50%), Positives = 21/26 (80%) Frame = +3 Query: 864 SDMMDGRVGAIRSALDAEGFNDVSIM 941 ++M D +V A+R+ALDA+G+ DV I+ Sbjct: 236 TNMFDAQVDAVRAALDAKGYKDVEIV 261
>Os04g0436000:Os04g0436000 | Length = 298 Score = 30.4 bits (67), Expect = 3.7 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%) Frame = -1 Query: 113 DLSRGEGD--GGSHGLAGGVEDEEKTM 39 +LSRG+GD GG HG G D+E+ M Sbjct: 145 ELSRGDGDEDGGDHGGGGAARDKEEKM 171
>AK068239:Os02g0138200 | Length = 331 Score = 30.4 bits (67), Expect = 3.7 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +3 Query: 141 GHAGFGSSFAVPRTGPRPRSV--AVRVSSEQEAAATVRAPSGRSIEECEA 284 G A F S +P T P P V A S+ + T PSG+S++ EA Sbjct: 196 GSASFSLSQILPNTNPAPPKVSNATEASASHAESRTKVKPSGKSLKPSEA 245
>AK064810:Os02g0138200 | Length = 552 Score = 30.4 bits (67), Expect = 3.7 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +3 Query: 141 GHAGFGSSFAVPRTGPRPRSV--AVRVSSEQEAAATVRAPSGRSIEECEA 284 G A F S +P T P P V A S+ + T PSG+S++ EA Sbjct: 417 GSASFSLSQILPNTNPAPPKVSNATEASASHAESRTKVKPSGKSLKPSEA 466
>Os02g0257300:Os02g0257300 | Length = 478 Score = 30.0 bits (66), Expect = 4.8 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = +3 Query: 174 PRTGPRPRSVA--VRVSSEQEAAATVRAPSGRSIEECEADAVAGRFPAPAAFVRPKAP-D 344 P + P P + A + SE E+AAT AP+ S EA A AP A RP +P Sbjct: 407 PPSSPSPLAPAEATKNESESESAATESAPAVNSAPVAEAAPEA----APPAAPRPLSPYP 462 Query: 345 GTPEIRP 365 P+++P Sbjct: 463 NYPDLKP 469
>AK105568:Os11g0176000 | Length = 522 Score = 30.0 bits (66), Expect = 4.8 Identities = 21/66 (31%), Positives = 34/66 (51%) Frame = -2 Query: 802 TVSSFRITPSSLTMPSCPSDE*GSKATSV*TMISGNLSLSRRIVRGTKPLSLYASTPVGD 623 TV+ + PS+ ++PSC S G ++ + + +G GT+PLS S VG Sbjct: 2 TVAYLKEMPSTPSIPSCTS---GMRSVAARLLGAGT---------GTRPLSFVGSNGVGG 49 Query: 622 FNASGT 605 +ASG+ Sbjct: 50 RSASGS 55
>AK071709:Os03g0799500 | Length = 204 Score = 30.0 bits (66), Expect = 4.8 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +3 Query: 666 PRTIRLLKDKFPDIIVYTDVALDPYSSD--GHDGIVREDGVILN 791 P I + +FP IV+T + L + GH GI REDGVIL+ Sbjct: 8 PAPIDPRRARFPCCIVWTPLPLISWLIPFIGHIGICREDGVILD 51
>Os06g0288300:Os06g0288300 | Length = 544 Score = 29.6 bits (65), Expect = 6.3 Identities = 26/69 (37%), Positives = 28/69 (40%) Frame = +3 Query: 147 AGFGSSFAVPRTGPRPRSVAVRVSSEQEAAATVRAPSGRSIEECEADAVAGRFPAPAAFV 326 AG GSS GPR RSV + A A R +G EE A A APAA Sbjct: 447 AGGGSSHRC--LGPRSRSVPAPEKGPKSAPARTRRSAGSGAEEERARRTAA--AAPAAGR 502 Query: 327 RPKAPDGTP 353 R G P Sbjct: 503 RRSEQGGQP 511
>Os03g0227400:Os03g0227400 | Length = 455 Score = 29.6 bits (65), Expect = 6.3 Identities = 12/26 (46%), Positives = 21/26 (80%) Frame = +3 Query: 864 SDMMDGRVGAIRSALDAEGFNDVSIM 941 ++M D ++ AIR+ALDA+G++ V I+ Sbjct: 259 TNMFDAQLDAIRAALDAKGYSGVDIV 284
>AK110287: | Length = 856 Score = 29.6 bits (65), Expect = 6.3 Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 28/130 (21%) Frame = +3 Query: 63 PSS*AMASTVPF-SPAKVQMFQATNCHGHAG-----------FGSSFAVPRTGPRPRSVA 206 P+ A A VP +PAK + G +G G + A P +P + A Sbjct: 412 PAVAATAKAVPAEAPAKTAAAPKASTAGTSGESKPAATTATTAGKTTAKPAEAAKPSAPA 471 Query: 207 VRVSSEQEAA------------ATVRAPSGRSIEECEADAVAGRFPAP----AAFVRPKA 338 ++E AA +T AP+ + +A A A P P A+ PK+ Sbjct: 472 ATTTTEGGAARTFADLFRAKNQSTAAAPAATTESSQQASATATPPPEPTSAAASTDSPKS 531 Query: 339 PDGTPEIRPL 368 P TP + P+ Sbjct: 532 PPSTPAVAPV 541
>AK073234:Os05g0291700 | Length = 495 Score = 29.6 bits (65), Expect = 6.3 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +3 Query: 150 GFGSSFAVPRTGPRPRSVAVRVSSEQEAAATVRAPSGRSIEECEADAVAGRFPAPAAF-V 326 GFG+ F+ + + VA + S E E A + G++ + A A PA Sbjct: 407 GFGTDFSWEKLSTQLAGVATQDSDEVEPKAQIATVRGQAKAKKLAPQRAVVKPAAQKTRP 466 Query: 327 RPKAPDGTPEIRPL 368 PK P+ P++RP+ Sbjct: 467 TPKQPESKPDVRPV 480
>AK072886:Os01g0249900 | Length = 312 Score = 29.6 bits (65), Expect = 6.3 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%) Frame = +3 Query: 150 GFGSSFAVPRTGPRPRS---VAVRVSSEQEAAATVRAPS 257 GFG S P PR R V R++ EQEAAA AP+ Sbjct: 133 GFGGSAPTPTPTPRGRGGRRVRRRMAQEQEAAALPSAPA 171 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 42,032,305 Number of extensions: 954859 Number of successful extensions: 3670 Number of sequences better than 10.0: 18 Number of HSP's gapped: 3659 Number of HSP's successfully gapped: 18 Length of query: 528 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 423 Effective length of database: 11,195,550 Effective search space: 4735717650 Effective search space used: 4735717650 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
