ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf22e10 |
|---|---|
| Clone Library Name | barley_pub |
>O22315:SFRS1_ARATH Pre-mRNA-splicing factor SF2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 303 Score = 274 bits (701), Expect = 5e-73 Identities = 135/195 (69%), Positives = 154/195 (78%), Gaps = 10/195 (5%) Frame = +2 Query: 107 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 286 MS R SRT+YVGNLPGDIREREVEDLF KYG +V+IDLKVPPRPPG+AFVEF+D RDAED Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60 Query: 287 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSH----------XXXXXXXXVSRHTEYR 436 AI GRDGY+FDG+RLRVELAHGGR +S S SR +E+R Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120 Query: 437 VLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTE 616 VLVTGLPSSASWQDLKDHMRK GDVCFS+VYR+ GT G+VDYT Y+DMKYA++KLDDTE Sbjct: 121 VLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180 Query: 617 FKNAFSRAPIRVKEY 661 F+NAFS +RV+EY Sbjct: 181 FRNAFSNGYVRVREY 195
>Q6NYA0:SFRS1_DANRE Splicing factor, arginine/serine-rich 1 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 245 Score = 189 bits (480), Expect = 2e-47 Identities = 99/179 (55%), Positives = 124/179 (69%), Gaps = 4/179 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP DIR ++VED+FYKYG I +IDLK P FAFVEFEDPRDAEDA+ GRDGY Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXV---SRHTEYRVLVTGLPSSASWQDL 481 ++DG RLRVE GR SR +EYRV+V+GLP S SWQDL Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136 Query: 482 KDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK-NAFSRAPIRVK 655 KDHMR+AGDVC+++V+R+G G+V++ +DM YA+RKLD+T+F+ + A IRVK Sbjct: 137 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
>Q5ZML3:SFRS1_CHICK Splicing factor, arginine/serine-rich 1 - Gallus gallus (Chicken)| Length = 257 Score = 189 bits (479), Expect = 3e-47 Identities = 98/179 (54%), Positives = 124/179 (69%), Gaps = 4/179 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP DIR +++ED+FYKYG I +IDLK P FAFVEFEDPRDAEDA+ GRDGY Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77 Query: 311 NFDGNRLRVELAHGGRA---NSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 ++DG RLRVE GR SR +EYRV+V+GLP S SWQDL Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 137 Query: 482 KDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK-NAFSRAPIRVK 655 KDHMR+AGDVC+++V+R+G G+V++ +DM YA+RKLD+T+F+ + A IRVK Sbjct: 138 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>Q5R7H2:SFRS1_PONPY Splicing factor, arginine/serine-rich 1 - Pongo pygmaeus| (Orangutan) Length = 248 Score = 186 bits (473), Expect = 1e-46 Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 4/179 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP DIR +++ED+FYKYG I +IDLK P FAFVEFEDPRDAEDA+ GRDGY Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77 Query: 311 NFDGNRLRVELAHGGRA---NSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 ++DG RLRVE GR SR +E RV+V+GLP S SWQDL Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137 Query: 482 KDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK-NAFSRAPIRVK 655 KDHMR+AGDVC+++VYR+G G+V++ +DM YA+RKLD+T+F+ + A IRVK Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>Q3YLA6:SFRS1_PIG Splicing factor, arginine/serine-rich 1 - Sus scrofa (Pig)| Length = 248 Score = 186 bits (473), Expect = 1e-46 Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 4/179 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP DIR +++ED+FYKYG I +IDLK P FAFVEFEDPRDAEDA+ GRDGY Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77 Query: 311 NFDGNRLRVELAHGGRA---NSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 ++DG RLRVE GR SR +E RV+V+GLP S SWQDL Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137 Query: 482 KDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK-NAFSRAPIRVK 655 KDHMR+AGDVC+++VYR+G G+V++ +DM YA+RKLD+T+F+ + A IRVK Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>Q6PDM2:SFRS1_MOUSE Splicing factor, arginine/serine-rich 1 - Mus musculus (Mouse)| Length = 248 Score = 186 bits (473), Expect = 1e-46 Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 4/179 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP DIR +++ED+FYKYG I +IDLK P FAFVEFEDPRDAEDA+ GRDGY Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77 Query: 311 NFDGNRLRVELAHGGRA---NSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 ++DG RLRVE GR SR +E RV+V+GLP S SWQDL Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137 Query: 482 KDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK-NAFSRAPIRVK 655 KDHMR+AGDVC+++VYR+G G+V++ +DM YA+RKLD+T+F+ + A IRVK Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>Q07955:SFRS1_HUMAN Splicing factor, arginine/serine-rich 1 - Homo sapiens (Human)| Length = 248 Score = 186 bits (473), Expect = 1e-46 Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 4/179 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP DIR +++ED+FYKYG I +IDLK P FAFVEFEDPRDAEDA+ GRDGY Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77 Query: 311 NFDGNRLRVELAHGGRA---NSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 ++DG RLRVE GR SR +E RV+V+GLP S SWQDL Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137 Query: 482 KDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK-NAFSRAPIRVK 655 KDHMR+AGDVC+++VYR+G G+V++ +DM YA+RKLD+T+F+ + A IRVK Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>Q0VCY7:SFRS1_BOVIN Splicing factor, arginine/serine-rich 1 - Bos taurus (Bovine)| Length = 248 Score = 186 bits (473), Expect = 1e-46 Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 4/179 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP DIR +++ED+FYKYG I +IDLK P FAFVEFEDPRDAEDA+ GRDGY Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77 Query: 311 NFDGNRLRVELAHGGRA---NSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 ++DG RLRVE GR SR +E RV+V+GLP S SWQDL Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137 Query: 482 KDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK-NAFSRAPIRVK 655 KDHMR+AGDVC+++VYR+G G+V++ +DM YA+RKLD+T+F+ + A IRVK Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>Q9NEW6:RSP3_CAEEL Probable splicing factor, arginine/serine-rich 3 - Caenorhabditis| elegans Length = 258 Score = 186 bits (473), Expect = 1e-46 Identities = 99/190 (52%), Positives = 125/190 (65%), Gaps = 14/190 (7%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVGNLPGD+RE+EVED+F+KYGRI +D+K R P FAFVEFED RDAEDA++ RDGY Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRARDGY 69 Query: 311 NFDGNRLRVELAHG-GRANSSSLP------------NSHXXXXXXXXVSRHTEYRVLVTG 451 FDG R+RVE G G P R T YRV+V G Sbjct: 70 EFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEG 129 Query: 452 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK-NA 628 LP + SWQDLKDHMR AGDVC+++V R+G G+V++T Y+D+KYA+RKLDDT+F+ + Sbjct: 130 LPPTGSWQDLKDHMRDAGDVCYADVARDG---TGVVEFTRYEDVKYAVRKLDDTKFRSHE 186 Query: 629 FSRAPIRVKE 658 A IRV+E Sbjct: 187 GETAYIRVRE 196
>Q7SXP4:SF1L1_DANRE Splicing factor, arginine/serine-rich 1-like protein 1 - Danio| rerio (Zebrafish) (Brachydanio rerio) Length = 245 Score = 182 bits (463), Expect = 2e-45 Identities = 98/190 (51%), Positives = 123/190 (64%), Gaps = 15/190 (7%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP DIR ++VED+FYKYG I +IDLK P FAFVEFEDPRDAEDA+ RDGY Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76 Query: 311 NFDGNRLRVELAHGGRA--------------NSSSLPNSHXXXXXXXXVSRHTEYRVLVT 448 ++DG RLRVE GR SR +EYRV+V+ Sbjct: 77 DYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVS 136 Query: 449 GLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK-N 625 GLP S SWQDLKDHMR+AGDVC+++V+R+G G+V++ +DM YA+RKLD+T+F+ + Sbjct: 137 GLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSH 193 Query: 626 AFSRAPIRVK 655 A IRVK Sbjct: 194 EGETAYIRVK 203
>Q6DII2:SFRS1_XENTR Splicing factor, arginine/serine-rich 1 - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 267 Score = 181 bits (459), Expect = 5e-45 Identities = 98/198 (49%), Positives = 124/198 (62%), Gaps = 23/198 (11%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP DIR +++ED+FYKYG I +IDLK P FAFVEFEDPRDAEDA+ GRDGY Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77 Query: 311 NFDGNRLRVELAHGGR----------------------ANSSSLPNSHXXXXXXXXVSRH 424 ++DG RLRVE GR SR Sbjct: 78 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRR 137 Query: 425 TEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKL 604 +EYRV+V+GLP S SWQDLKDHMR+AGDVC+++V+R+G G+V++ +DM YA+RKL Sbjct: 138 SEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKL 194 Query: 605 DDTEFK-NAFSRAPIRVK 655 D+T+F+ + A IRVK Sbjct: 195 DNTKFRSHEGETAYIRVK 212
>Q5PPI1:SFRS9_RAT Splicing factor, arginine/serine-rich 9 - Rattus norvegicus (Rat)| Length = 221 Score = 178 bits (451), Expect = 5e-44 Identities = 92/167 (55%), Positives = 122/167 (73%), Gaps = 2/167 (1%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP D+RE+++EDLFYKYGRI EI+LK FAFV FEDPRDAEDAI GR+GY Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75 Query: 311 NFDGNRLRVEL--AHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 ++ RLRVE A+GGR + +R +++RVLV+GLP S SWQDLK Sbjct: 76 DYGQCRLRVEFPRAYGGRGGWPRASRNGPP-------TRRSDFRVLVSGLPPSGSWQDLK 128 Query: 485 DHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKN 625 DHMR+AGDVC+++V ++G +G+V+Y +DM+YA+RKLDDT+F++ Sbjct: 129 DHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRS 172
>Q9D0B0:SFRS9_MOUSE Splicing factor, arginine/serine-rich 9 - Mus musculus (Mouse)| Length = 222 Score = 176 bits (447), Expect = 1e-43 Identities = 91/167 (54%), Positives = 120/167 (71%), Gaps = 2/167 (1%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP D+RE+++EDLFYKYGRI EI+LK FAFV FEDPRDAEDAI GR+GY Sbjct: 17 IYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 76 Query: 311 NFDGNRLRVEL--AHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 ++ RLRVE +GGR +R +++RVLV+GLP S SWQDLK Sbjct: 77 DYGQCRLRVEFPRTYGGRGG-------WPRGARNGPPTRRSDFRVLVSGLPPSGSWQDLK 129 Query: 485 DHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKN 625 DHMR+AGDVC+++V ++G +G+V+Y +DM+YA+RKLDDT+F++ Sbjct: 130 DHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRS 173
>Q13242:SFRS9_HUMAN Splicing factor, arginine/serine-rich 9 - Homo sapiens (Human)| Length = 221 Score = 176 bits (447), Expect = 1e-43 Identities = 91/167 (54%), Positives = 120/167 (71%), Gaps = 2/167 (1%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IYVGNLP D+RE+++EDLFYKYGRI EI+LK FAFV FEDPRDAEDAI GR+GY Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75 Query: 311 NFDGNRLRVEL--AHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 ++ RLRVE +GGR +R +++RVLV+GLP S SWQDLK Sbjct: 76 DYGQCRLRVEFPRTYGGRGG-------WPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLK 128 Query: 485 DHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKN 625 DHMR+AGDVC+++V ++G +G+V+Y +DM+YA+RKLDDT+F++ Sbjct: 129 DHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRS 172
>Q8VE97:SFRS4_MOUSE Splicing factor, arginine/serine-rich 4 - Mus musculus (Mouse)| Length = 489 Score = 120 bits (301), Expect = 1e-26 Identities = 67/167 (40%), Positives = 99/167 (59%), Gaps = 5/167 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +Y+G L RER+VE F YG+I+E+DLK G+ FVEF+D RDA+DA+ +G Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRH-----TEYRVLVTGLPSSASWQ 475 + G R+ VE A G R + S ++ TEYR++V L S SWQ Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118 Query: 476 DLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTE 616 DLKD+MR+AG+V +++ ++ G G++++ +Y DMK A+ KLD TE Sbjct: 119 DLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTE 164
>Q08170:SFRS4_HUMAN Splicing factor, arginine/serine-rich 4 - Homo sapiens (Human)| Length = 494 Score = 120 bits (301), Expect = 1e-26 Identities = 67/167 (40%), Positives = 99/167 (59%), Gaps = 5/167 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +Y+G L RER+VE F YG+I+E+DLK G+ FVEF+D RDA+DA+ +G Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRH-----TEYRVLVTGLPSSASWQ 475 + G R+ VE A G R + S ++ TEYR++V L S SWQ Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118 Query: 476 DLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTE 616 DLKD+MR+AG+V +++ ++ G G++++ +Y DMK A+ KLD TE Sbjct: 119 DLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTE 164
>Q13247:SFRS6_HUMAN Splicing factor, arginine/serine-rich 6 - Homo sapiens (Human)| Length = 344 Score = 117 bits (294), Expect = 7e-26 Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 11/173 (6%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +Y+G L ++RE++++ F YGR++E+DLK G+ FVEFED RDA+DA+ +G Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58 Query: 311 NFDGNRLRVELA-----------HGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLP 457 G R+ VE A +G R+ + TEYR++V L Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118 Query: 458 SSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTE 616 S SWQDLKD MR+AG+V +++ ++E G++++ +Y DMK A+ KLD TE Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTE 170
>Q3B7L6:SFRS6_BOVIN Splicing factor, arginine/serine-rich 6 - Bos taurus (Bovine)| Length = 345 Score = 114 bits (284), Expect = 1e-24 Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 11/173 (6%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +Y+G L ++RE++++ F YGR++ IDLK G+ FVEFED RDA+DA+ +G Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLGIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58 Query: 311 NFDGNRLRVELA-----------HGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLP 457 G R+ VE A +G R+ + TE+R++V L Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118 Query: 458 SSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTE 616 S SWQDLKD MR+AG+V +++ ++E G++++ +Y DMK A+ KLD TE Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTE 170
>P26686:SRR55_DROME Serine-arginine protein 55 - Drosophila melanogaster (Fruit fly)| Length = 376 Score = 111 bits (278), Expect = 5e-24 Identities = 68/181 (37%), Positives = 97/181 (53%), Gaps = 19/181 (10%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVG LP +RER++E F YGR +I +K G+ FVEFED RDA+DA+ +G Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60 Query: 311 NFDGNRLRVELAHGGRANSS-------------------SLPNSHXXXXXXXXVSRHTEY 433 G R+ VE A G S+ + N + TEY Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120 Query: 434 RVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDT 613 R++V L S SWQDLKD+MR+AG+V +++ +++ G+V++ + DMK AI KLDDT Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDT 179 Query: 614 E 616 E Sbjct: 180 E 180
>Q09167:SFRS5_RAT Splicing factor, arginine/serine-rich 5 - Rattus norvegicus (Rat)| Length = 269 Score = 109 bits (273), Expect = 2e-23 Identities = 68/169 (40%), Positives = 91/169 (53%), Gaps = 7/169 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++G L RE++VE F YGRI +IDLK GF FVEFEDPRDA+DA+ DG Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60 Query: 311 NFDGNRLRVELAH----GGRAN---SSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 R+ +E A GGR S + TE R++V L S S Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120 Query: 470 WQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTE 616 WQDLKD MR+AG+V F++ +R G+V++ +Y D+K AI KL E Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNE-GVVEFASYGDLKNAIEKLSGKE 168
>Q13243:SFRS5_HUMAN Splicing factor, arginine/serine-rich 5 - Homo sapiens (Human)| Length = 272 Score = 109 bits (273), Expect = 2e-23 Identities = 68/169 (40%), Positives = 91/169 (53%), Gaps = 7/169 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++G L RE++VE F YGRI +IDLK GF FVEFEDPRDA+DA+ DG Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60 Query: 311 NFDGNRLRVELAH----GGRAN---SSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 R+ +E A GGR S + TE R++V L S S Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 120 Query: 470 WQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTE 616 WQDLKD MR+AG+V F++ +R G+V++ +Y D+K AI KL E Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNE-GVVEFASYGDLKNAIEKLSGKE 168
>O35326:SFRS5_MOUSE Splicing factor, arginine/serine-rich 5 - Mus musculus (Mouse)| Length = 270 Score = 105 bits (262), Expect = 4e-22 Identities = 66/165 (40%), Positives = 90/165 (54%), Gaps = 7/165 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++G L RE++VE F YGRI +IDLK GF FVEFEDPRDA+DA+ DG Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60 Query: 311 NFDGNRLRVELAH----GGRAN---SSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 R+ +E A GGR S L + + R++V L S S Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRLAVADLGNDRRKCSTCKNRNRLIVENLSSRVS 120 Query: 470 WQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKL 604 WQDLKD MR+AG+V F++ +R G+V++ +Y D+K AI KL Sbjct: 121 WQDLKDFMRQAGEVTFADAHRPKLNE-GVVEFASYGDLKNAIEKL 164
>P78814:SRP2_SCHPO Pre-mRNA-splicing factor srp2 - Schizosaccharomyces pombe (Fission| yeast) Length = 365 Score = 98.6 bits (244), Expect = 5e-20 Identities = 58/164 (35%), Positives = 85/164 (51%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 ++VG +P ++ D F YG+I++ L GF FVE ED RDA D + G Sbjct: 6 LFVGRIPPQATREDMMDFFKGYGQILDCKLM-----NGFGFVEVEDARDARDIVNDFQGK 60 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 F G+R+ VE A G R + S R T +R++V L SWQDLKD Sbjct: 61 EFMGSRIVVEPARGERRRRENFRESAASKYPRP---RRTGFRLIVENLSEDVSWQDLKDV 117 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 MRKAG+ F++ +RE G G+V+++ +DM+ A+ L+ K Sbjct: 118 MRKAGEPTFTDAHRENPGA-GVVEFSTEEDMRNALTSLNGEVIK 160
>Q23120:RSP2_CAEEL Probable splicing factor, arginine/serine-rich 2 - Caenorhabditis| elegans Length = 281 Score = 81.3 bits (199), Expect = 8e-15 Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 14/172 (8%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +Y+G LP +R+VE F YG++ ++ +K GF FV+F+D RDA+DA+ +G Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58 Query: 311 NFDGNRLRVEL-----------AHGGRANSSSLPNSHXXXXXXXXVSR--HTEYRVLVTG 451 G R+ +E + G SR T +R+++ Sbjct: 59 ELCGERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDN 118 Query: 452 LPSSASWQDLKDHMRKAG-DVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKL 604 L + SWQD+KDH+RK G + +SE ++ IV +T++DD++ A+ KL Sbjct: 119 LSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQ-AIVCFTSHDDLRDAMNKL 169
>Q18409:RSP6_CAEEL Probable splicing factor, arginine/serine-rich 6 - Caenorhabditis| elegans Length = 179 Score = 78.2 bits (191), Expect = 6e-14 Identities = 39/76 (51%), Positives = 53/76 (69%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVG LP D +E+E++F ++GRI ++ V RPPGFAFVE++D RDAEDA++ DG Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62 Query: 311 NFDGNRLRVELAHGGR 358 G R RVEL+ G R Sbjct: 63 RICGVRARVELSTGQR 78
>Q23121:RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1 - Caenorhabditis| elegans Length = 312 Score = 73.6 bits (179), Expect = 2e-12 Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 30/189 (15%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 IY+G L + E+++E F YG+I ++ LK GF FVEF+D RDAEDA+ +G Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK-----NGFGFVEFDDKRDAEDAVHDLNGK 59 Query: 311 NFDGNRLRVELAH-------------GGRANSSSLPNSHXXXXXXXXVSRH--------- 424 G R+ ++ + GGR + S R+ Sbjct: 60 ELGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRES 119 Query: 425 -------TEYRVLVTGLPSSASWQDLKDHMRKAG-DVCFSEVYREGGGTIGIVDYTNYDD 580 T +RV+V L S SWQDLKD +R+ G + ++E ++ ++ + D Sbjct: 120 RYGRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNE--ALLCFATPSD 177 Query: 581 MKYAIRKLD 607 +K I K D Sbjct: 178 LKRCIEKCD 186
>Q8BL97:SFRS7_MOUSE Splicing factor, arginine/serine-rich 7 - Mus musculus (Mouse)| Length = 267 Score = 71.6 bits (174), Expect = 6e-12 Identities = 38/74 (51%), Positives = 49/74 (66%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVGNL + E+E F YG + + + PPGFAFVEFEDPRDAEDA++G DG Sbjct: 42 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 99 Query: 311 NFDGNRLRVELAHG 352 G+R+RVEL+ G Sbjct: 100 VICGSRVRVELSTG 113
>Q16629:SFRS7_HUMAN Splicing factor, arginine/serine-rich 7 - Homo sapiens (Human)| Length = 238 Score = 71.6 bits (174), Expect = 6e-12 Identities = 38/74 (51%), Positives = 49/74 (66%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVGNL + E+E F YG + + + PPGFAFVEFEDPRDAEDA++G DG Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70 Query: 311 NFDGNRLRVELAHG 352 G+R+RVEL+ G Sbjct: 71 VICGSRVRVELSTG 84
>Q3T106:SFRS7_BOVIN Splicing factor, arginine/serine-rich 7 - Bos taurus (Bovine)| Length = 235 Score = 71.6 bits (174), Expect = 6e-12 Identities = 38/74 (51%), Positives = 49/74 (66%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVGNL + E+E F YG + + + PPGFAFVEFEDPRDAEDA++G DG Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70 Query: 311 NFDGNRLRVELAHG 352 G+R+RVEL+ G Sbjct: 71 VICGSRVRVELSTG 84
>Q02427:RBP1_DROME RNA-binding protein 1 - Drosophila melanogaster (Fruit fly)| Length = 144 Score = 71.6 bits (174), Expect = 6e-12 Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 2/82 (2%) Frame = +2 Query: 113 RRWSRT--IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 286 R W +YVGNL + E+E F KYG + + V PPGFAFVEFED RDAED Sbjct: 5 REWDLACKVYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAED 62 Query: 287 AIQGRDGYNFDGNRLRVELAHG 352 A + DG G R+RVE++ G Sbjct: 63 ATRALDGTRCCGTRIRVEMSSG 84
>P84104:SFRS3_MOUSE Splicing factor, arginine/serine-rich 3 - Mus musculus (Mouse)| Length = 164 Score = 69.7 bits (169), Expect = 2e-11 Identities = 38/83 (45%), Positives = 52/83 (62%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVGNL + + E+E F YG + + V PPGFAFVEFEDPRDA DA++ DG Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69 Query: 311 NFDGNRLRVELAHGGRANSSSLP 379 G R+RVEL++G + + + P Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGP 92
>P84103:SFRS3_HUMAN Splicing factor, arginine/serine-rich 3 - Homo sapiens (Human)| Length = 164 Score = 69.7 bits (169), Expect = 2e-11 Identities = 38/83 (45%), Positives = 52/83 (62%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVGNL + + E+E F YG + + V PPGFAFVEFEDPRDA DA++ DG Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69 Query: 311 NFDGNRLRVELAHGGRANSSSLP 379 G R+RVEL++G + + + P Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGP 92
>Q3SZR8:SFRS3_BOVIN Splicing factor, arginine/serine-rich 3 - Bos taurus (Bovine)| Length = 164 Score = 69.7 bits (169), Expect = 2e-11 Identities = 38/83 (45%), Positives = 52/83 (62%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVGNL + + E+E F YG + + V PPGFAFVEFEDPRDA DA++ DG Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69 Query: 311 NFDGNRLRVELAHGGRANSSSLP 379 G R+RVEL++G + + + P Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGP 92
>P92964:RSP31_ARATH Arginine/serine-rich-splicing factor RSP31 - Arabidopsis thaliana| (Mouse-ear cress) Length = 264 Score = 65.9 bits (159), Expect = 3e-10 Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 R ++VGN + R+ ++E LF KYGR+ +D+K G+AFV FED RDAEDAI+ D Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMK-----SGYAFVYFEDERDAEDAIRKLD 56 Query: 305 GYNF--DGNRLRVELAHGGR 358 + F + RL VE A G R Sbjct: 57 NFPFGYEKRRLSVEWAKGER 76 Score = 32.7 bits (73), Expect = 3.1 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 11/96 (11%) Frame = +2 Query: 122 SRTIYVGNL-PGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++T++V N P +E ++E F YG++ + ++ F+FV+FE DA A++ Sbjct: 92 TKTLFVINFDPIRTKEHDIEKHFEPYGKVTNVRIR-----RNFSFVQFETQEDATKALEA 146 Query: 299 RDGYNFDGNRLRVELA----------HGGRANSSSL 376 + VE A +GGR+ SL Sbjct: 147 TQRSKILDRVVSVEYALKDDDERDDRNGGRSPRRSL 182
>P92966:RSP41_ARATH Arginine/serine-rich-splicing factor RSP41 - Arabidopsis thaliana| (Mouse-ear cress) Length = 356 Score = 65.5 bits (158), Expect = 4e-10 Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 2/165 (1%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 + ++ GN D RE ++E LF KYG++ +D+K GFAFV ED RDAEDAI+ D Sbjct: 2 KPVFCGNFEYDARESDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56 Query: 305 GYNF--DGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQD 478 + + G RLRVE R + S R ++ ++ + +D Sbjct: 57 RFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGL----RPSKTLFVINFDAQNTRTRD 112 Query: 479 LKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDT 613 L+ H G + + R + Y+ + A R LD T Sbjct: 113 LERHFEPYGKIVNVRIRRN-------FAFIQYEAQEDATRALDAT 150
>P92965:RSP40_ARATH Arginine/serine-rich-splicing factor RSP40 - Arabidopsis thaliana| (Mouse-ear cress) Length = 350 Score = 65.1 bits (157), Expect = 6e-10 Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 2/74 (2%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 + ++ GN D RE ++E LF KYG++ +D+K GFAFV ED RDAEDAI+ D Sbjct: 2 KPVFCGNFEYDAREGDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56 Query: 305 GYNF--DGNRLRVE 340 + F G RLRVE Sbjct: 57 RFEFGRKGRRLRVE 70
>P38922:HRB1_YEAST Protein HRB1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 454 Score = 65.1 bits (157), Expect = 6e-10 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 6/172 (3%) Frame = +2 Query: 104 RMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP-RPPGFAFVEFEDPRDA 280 +++R +S +I+VGNL D ++ + F + G++V D+ G VEF + D Sbjct: 154 KVNRNYSNSIFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSRGHHRGMGTVEFTNSDDV 213 Query: 281 EDAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTE--YRVLVTGL 454 + AI+ DG F ++ V + +N N RH + V+V L Sbjct: 214 DRAIRQYDGAFFMDRKIFVRQDNPPPSN-----NIKERKALDRGELRHNRKTHEVIVKNL 268 Query: 455 PSSASWQDLKDHMRKAGDVCFSEVYREGGGT---IGIVDYTNYDDMKYAIRK 601 P+S +WQ LKD ++ G+V ++V +G G G V + + D+ AI K Sbjct: 269 PASVNWQALKDIFKECGNVAHADVELDGDGVSTGSGTVSFYDIKDLHRAIEK 320 Score = 50.8 bits (120), Expect = 1e-05 Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 16/184 (8%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR--PPGFAFVEFEDPRDAEDA 289 R + + V NLP + + ++D+F + G + D+++ G V F D +D A Sbjct: 258 RKTHEVIVKNLPASVNWQALKDIFKECGNVAHADVELDGDGVSTGSGTVSFYDIKDLHRA 317 Query: 290 IQGRDGYNFDGNRLRVELAHGGRANS----------SSLPNSHXXXXXXXXVSRHTEYRV 439 I+ +GY+ +GN L V+ +S S N V R+ Sbjct: 318 IEKYNGYSIEGNVLDVKSKESVHNHSDGDDVDIPMDDSPVNEEARKFTENVVGGGERNRL 377 Query: 440 L-VTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGT---IGIVDYTNYDDMKYAIRKLD 607 + + LP S + DL D G V +E+ + G I +V+Y N DD I +L+ Sbjct: 378 IYCSNLPFSTAKSDLYDLFETIGKVNNAELRYDSKGAPTGIAVVEYDNVDDADVCIERLN 437 Query: 608 DTEF 619 + + Sbjct: 438 NYNY 441 Score = 44.3 bits (103), Expect = 0.001 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR--PPGFAFVEFEDPRDAEDAIQ 295 +R IY NLP + ++ DLF G++ +L+ + P G A VE+++ DA+ I+ Sbjct: 375 NRLIYCSNLPFSTAKSDLYDLFETIGKVNNAELRYDSKGAPTGIAVVEYDNVDDADVCIE 434 Query: 296 GRDGYNFDGNRLRVELA 346 + YN+ G L + A Sbjct: 435 RLNNYNYGGCDLDISYA 451 Score = 32.3 bits (72), Expect = 4.0 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = +2 Query: 413 VSRHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMK 586 V+R+ + V L ++ +DL + + G V +++ G +G V++TN DD+ Sbjct: 155 VNRNYSNSIFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSRGHHRGMGTVEFTNSDDVD 214 Query: 587 YAIRKLDDTEF 619 AIR+ D F Sbjct: 215 RAIRQYDGAFF 225
>Q10021:RSP5_CAEEL Probable splicing factor, arginine/serine-rich 5 - Caenorhabditis| elegans Length = 208 Score = 64.3 bits (155), Expect = 1e-09 Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 2/76 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +Y+G +P + RER+VE YG+I I +K GFAFV+FED RDAEDA DG Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKY-----GFAFVDFEDSRDAEDACHDLDGK 58 Query: 311 NFDGN--RLRVELAHG 352 +G+ RL VE+A G Sbjct: 59 TMEGSSMRLVVEMARG 74
>Q01560:NOP3_YEAST Nucleolar protein 3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 414 Score = 62.4 bits (150), Expect = 4e-09 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 1/167 (0%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 ++V P D++E E+ ++F +G + E+ + GFAFVEFE+ A AI+ G Sbjct: 127 LFVRPFPLDVQESELNEIFGPFGPMKEVKIL-----NGFAFVEFEEAESAAKAIEEVHGK 181 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 +F L V S LP YR+ + LP SWQDLKD Sbjct: 182 SFANQPLEVVY--------SKLPAKR--------------YRITMKNLPEGCSWQDLKDL 219 Query: 491 MRKAG-DVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKNA 628 R+ + FS V G +++ + + + A+ +L++ EF+ + Sbjct: 220 ARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRGS 266
>P38159:HNRPG_HUMAN Heterogeneous nuclear ribonucleoprotein G - Homo sapiens (Human)| Length = 391 Score = 59.7 bits (143), Expect = 2e-08 Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +++G L + E+ +E +F KYGRIVE+ L + + GFAFV FE P DA+DA + Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69 Query: 302 DGYNFDGNRLRVELA 346 +G + DG ++VE A Sbjct: 70 NGKSLDGKAIKVEQA 84
>Q24491:RX21_DROME RNA-binding protein Rsf1 - Drosophila melanogaster (Fruit fly)| Length = 197 Score = 58.9 bits (141), Expect = 4e-08 Identities = 31/74 (41%), Positives = 46/74 (62%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVGNL +++ ++E F KYG++ + + PPGFAFVEFE DAE A +G Sbjct: 9 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAF--NPPGFAFVEFEHRDDAEKACDILNGS 66 Query: 311 NFDGNRLRVELAHG 352 G++LRVE++ G Sbjct: 67 ELLGSQLRVEISKG 80
>P84586:HNRPG_RAT Heterogeneous nuclear ribonucleoprotein G - Rattus norvegicus (Rat)| Length = 388 Score = 58.5 bits (140), Expect = 5e-08 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +++G L + E+ +E +F KYGRIVEI L + + GFAFV FE P DA+D + Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDM 69 Query: 302 DGYNFDGNRLRVELA 346 +G + DG ++VE A Sbjct: 70 NGKSLDGKAIKVEQA 84
>O35479:HNRPG_MOUSE Heterogeneous nuclear ribonucleoprotein G - Mus musculus (Mouse)| Length = 388 Score = 58.2 bits (139), Expect = 7e-08 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +++G L + E+ +E +F KYGRIVEI L + + GFAFV E P DA+DA + Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDM 69 Query: 302 DGYNFDGNRLRVELA 346 +G + DG ++VE A Sbjct: 70 NGKSLDGKAIKVEQA 84
>Q9BDY9:RBM4_RABIT RNA-binding protein 4 - Oryctolagus cuniculus (Rabbit)| Length = 359 Score = 57.0 bits (136), Expect = 2e-07 Identities = 42/164 (25%), Positives = 71/164 (43%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++GNLP + E+E+ LF +YG+++E D+ + FV ED AEDAI+ Y Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 G + VE + S+ L V + + + Q+L+ Sbjct: 59 KLHGVNINVEASKNKSKASTKLH---------------------VGNISPTCTNQELRAK 97 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 + G V ++ ++ V +D AIR LD+TEF+ Sbjct: 98 FEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137 Score = 47.4 bits (111), Expect = 1e-04 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S ++VGN+ +E+ F +YG ++E D+ +AFV E DA +AI+G Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV-----KDYAFVHMERAEDAVEAIRGL 131 Query: 302 DGYNFDGNRLRVELA 346 D F G R+ V+L+ Sbjct: 132 DNTEFQGKRMHVQLS 146
>Q8C7Q4:RBM4_MOUSE RNA-binding protein 4 - Mus musculus (Mouse)| Length = 361 Score = 57.0 bits (136), Expect = 2e-07 Identities = 42/164 (25%), Positives = 71/164 (43%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++GNLP + E+E+ LF +YG+++E D+ + FV ED AEDAI+ Y Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 G + VE + S+ L V + + + Q+L+ Sbjct: 59 KLHGVNINVEASKNKSKASTKLH---------------------VGNISPTCTNQELRAK 97 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 + G V ++ ++ V +D AIR LD+TEF+ Sbjct: 98 FEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137 Score = 47.4 bits (111), Expect = 1e-04 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S ++VGN+ +E+ F +YG ++E D+ +AFV E DA +AI+G Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV-----KDYAFVHMERAEDAVEAIRGL 131 Query: 302 DGYNFDGNRLRVELA 346 D F G R+ V+L+ Sbjct: 132 DNTEFQGKRMHVQLS 146
>Q64LC9:RBM4B_RAT RNA-binding protein 4B - Rattus norvegicus (Rat)| Length = 357 Score = 57.0 bits (136), Expect = 2e-07 Identities = 42/164 (25%), Positives = 71/164 (43%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++GNLP + E+E+ LF +YG+++E D+ + FV ED AEDAI+ Y Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 G + VE + S+ L V + + + Q+L+ Sbjct: 59 KLHGVNINVEASKNKSKASTKLH---------------------VGNISPTCTNQELRAK 97 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 + G V ++ ++ V +D AIR LD+TEF+ Sbjct: 98 FEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137 Score = 47.4 bits (111), Expect = 1e-04 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S ++VGN+ +E+ F +YG ++E D+ +AFV E DA +AI+G Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV-----KDYAFVHMERAEDAVEAIRGL 131 Query: 302 DGYNFDGNRLRVELA 346 D F G R+ V+L+ Sbjct: 132 DNTEFQGKRMHVQLS 146
>Q06AT9:RBM4B_PIG RNA-binding protein 4B - Sus scrofa (Pig)| Length = 359 Score = 57.0 bits (136), Expect = 2e-07 Identities = 42/164 (25%), Positives = 71/164 (43%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++GNLP + E+E+ LF +YG+++E D+ + FV ED AEDAI+ Y Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 G + VE + S+ L V + + + Q+L+ Sbjct: 59 KLHGVNINVEASKNKSKASTKLH---------------------VGNISPTCTNQELRAK 97 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 + G V ++ ++ V +D AIR LD+TEF+ Sbjct: 98 FEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137 Score = 47.4 bits (111), Expect = 1e-04 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S ++VGN+ +E+ F +YG ++E D+ +AFV E DA +AI+G Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV-----KDYAFVHMERAEDAVEAIRGL 131 Query: 302 DGYNFDGNRLRVELA 346 D F G R+ V+L+ Sbjct: 132 DNTEFQGKRMHVQLS 146
>Q8VE92:RBM4B_MOUSE RNA-binding protein 4B - Mus musculus (Mouse)| Length = 357 Score = 57.0 bits (136), Expect = 2e-07 Identities = 42/164 (25%), Positives = 71/164 (43%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++GNLP + E+E+ LF +YG+++E D+ + FV ED AEDAI+ Y Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 G + VE + S+ L V + + + Q+L+ Sbjct: 59 KLHGVNINVEASKNKSKASTKLH---------------------VGNISPTCTNQELRAK 97 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 + G V ++ ++ V +D AIR LD+TEF+ Sbjct: 98 FEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137 Score = 47.4 bits (111), Expect = 1e-04 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S ++VGN+ +E+ F +YG ++E D+ +AFV E DA +AI+G Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV-----KDYAFVHMERAEDAVEAIRGL 131 Query: 302 DGYNFDGNRLRVELA 346 D F G R+ V+L+ Sbjct: 132 DNTEFQGKRMHVQLS 146
>Q9BQ04:RBM4B_HUMAN RNA-binding protein 4B - Homo sapiens (Human)| Length = 359 Score = 57.0 bits (136), Expect = 2e-07 Identities = 42/164 (25%), Positives = 71/164 (43%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++GNLP + E+E+ LF +YG+++E D+ + FV ED AEDAI+ Y Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 G + VE + S+ L V + + + Q+L+ Sbjct: 59 KLHGVNINVEASKNKSKASTKLH---------------------VGNISPTCTNQELRAK 97 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 + G V ++ ++ V +D AIR LD+TEF+ Sbjct: 98 FEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137 Score = 47.4 bits (111), Expect = 1e-04 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S ++VGN+ +E+ F +YG ++E D+ +AFV E DA +AI+G Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV-----KDYAFVHMERAEDAVEAIRGL 131 Query: 302 DGYNFDGNRLRVELA 346 D F G R+ V+L+ Sbjct: 132 DNTEFQGKRMHVQLS 146
>Q9R0U0:FUSIP_MOUSE FUS-interacting serine-arginine-rich protein 1 - Mus musculus| (Mouse) Length = 262 Score = 57.0 bits (136), Expect = 2e-07 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 3/94 (3%) Frame = +2 Query: 104 RMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVP---PRPPGFAFVEFEDPR 274 R R + +++V N+ D R ++ F +YG IV++ + + RP GFA+V+FED R Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62 Query: 275 DAEDAIQGRDGYNFDGNRLRVELAHGGRANSSSL 376 DAEDA+ D G ++ ++ A G R + + Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQM 96
>O75494:FUSIP_HUMAN FUS-interacting serine-arginine-rich protein 1 - Homo sapiens| (Human) Length = 262 Score = 57.0 bits (136), Expect = 2e-07 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 3/94 (3%) Frame = +2 Query: 104 RMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVP---PRPPGFAFVEFEDPR 274 R R + +++V N+ D R ++ F +YG IV++ + + RP GFA+V+FED R Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62 Query: 275 DAEDAIQGRDGYNFDGNRLRVELAHGGRANSSSL 376 DAEDA+ D G ++ ++ A G R + + Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQM 96
>Q4R979:RBM4_MACFA RNA-binding protein 4 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 364 Score = 56.2 bits (134), Expect = 3e-07 Identities = 41/164 (25%), Positives = 71/164 (43%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++GNLP + E+E+ LF +YG+++E D+ + FV ED AEDAI+ Y Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 G + VE + S+ L V + + + ++L+ Sbjct: 59 KLHGVNINVEASKNKSKTSTKLH---------------------VGNISPTCTNKELRAK 97 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 + G V ++ ++ V +D AIR LD+TEF+ Sbjct: 98 FEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137 Score = 47.8 bits (112), Expect = 9e-05 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S ++VGN+ +E+ F +YG ++E D+ +AFV E DA +AI+G Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV-----KDYAFVHMERAEDAVEAIRGL 131 Query: 302 DGYNFDGNRLRVELA 346 D F G R+ V+L+ Sbjct: 132 DNTEFQGKRMHVQLS 146
>Q9BWF3:RBM4_HUMAN RNA-binding protein 4 - Homo sapiens (Human)| Length = 364 Score = 56.2 bits (134), Expect = 3e-07 Identities = 41/164 (25%), Positives = 71/164 (43%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++GNLP + E+E+ LF +YG+++E D+ + FV ED AEDAI+ Y Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 G + VE + S+ L V + + + ++L+ Sbjct: 59 KLHGVNINVEASKNKSKTSTKLH---------------------VGNISPTCTNKELRAK 97 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 + G V ++ ++ V +D AIR LD+TEF+ Sbjct: 98 FEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137 Score = 47.8 bits (112), Expect = 9e-05 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S ++VGN+ +E+ F +YG ++E D+ +AFV E DA +AI+G Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV-----KDYAFVHMERAEDAVEAIRGL 131 Query: 302 DGYNFDGNRLRVELA 346 D F G R+ V+L+ Sbjct: 132 DNTEFQGKRMHVQLS 146
>Q3MHX3:RBM4_BOVIN RNA-binding protein 4 - Bos taurus (Bovine)| Length = 362 Score = 56.2 bits (134), Expect = 3e-07 Identities = 41/164 (25%), Positives = 71/164 (43%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++GNLP + E+E+ LF +YG+++E D+ + FV ED AEDAI+ Y Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDI-----IKNYGFVHIEDKTAAEDAIRNLHHY 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 G + VE + S+ L V + + + ++L+ Sbjct: 59 KLHGVNINVEASKNKSKTSTKLH---------------------VGNISPTCTNKELRAK 97 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 + G V ++ ++ V +D AIR LD+TEF+ Sbjct: 98 FEEYGPVIECDIVKD----YAFVHMERAEDAVEAIRGLDNTEFQ 137 Score = 47.8 bits (112), Expect = 9e-05 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S ++VGN+ +E+ F +YG ++E D+ +AFV E DA +AI+G Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV-----KDYAFVHMERAEDAVEAIRGL 131 Query: 302 DGYNFDGNRLRVELA 346 D F G R+ V+L+ Sbjct: 132 DNTEFQGKRMHVQLS 146
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 56.2 bits (134), Expect = 3e-07 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VG L D E+ +E +F KYG+I E+ + + R GF FV FE+ DA+DA+ Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 302 DGYNFDGNRLRVELAHGGRANSS 370 +G + DG ++RV+ A N S Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRS 90
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 56.2 bits (134), Expect = 3e-07 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VG L D E+ +E +F KYG+I E+ + + R GF FV FE+ DA+DA+ Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 302 DGYNFDGNRLRVELAHGGRANSS 370 +G + DG ++RV+ A N S Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRS 90
>Q6PDU1:SFRS2_RAT Splicing factor, arginine/serine-rich 2 - Rattus norvegicus (Rat)| Length = 221 Score = 55.8 bits (133), Expect = 3e-07 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++ V NL + +F KYGR+ ++ + + GFAFV F D RDAEDA+ Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSH 388 DG DG LRV++A GR P+SH Sbjct: 75 MDGAVLDGRELRVQMARYGRP-----PDSH 99
>Q06A98:SFRS2_PIG Splicing factor, arginine/serine-rich 2 - Sus scrofa (Pig)| Length = 221 Score = 55.8 bits (133), Expect = 3e-07 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++ V NL + +F KYGR+ ++ + + GFAFV F D RDAEDA+ Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSH 388 DG DG LRV++A GR P+SH Sbjct: 75 MDGAVLDGRELRVQMARYGRP-----PDSH 99
>Q5R1W5:SFRS2_PANTR Splicing factor, arginine/serine-rich 2 - Pan troglodytes| (Chimpanzee) Length = 221 Score = 55.8 bits (133), Expect = 3e-07 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++ V NL + +F KYGR+ ++ + + GFAFV F D RDAEDA+ Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSH 388 DG DG LRV++A GR P+SH Sbjct: 75 MDGAVLDGRELRVQMARYGRP-----PDSH 99
>Q62093:SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 - Mus musculus (Mouse)| Length = 221 Score = 55.8 bits (133), Expect = 3e-07 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++ V NL + +F KYGR+ ++ + + GFAFV F D RDAEDA+ Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSH 388 DG DG LRV++A GR P+SH Sbjct: 75 MDGAVLDGRELRVQMARYGRP-----PDSH 99
>Q01130:SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 - Homo sapiens (Human)| Length = 221 Score = 55.8 bits (133), Expect = 3e-07 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++ V NL + +F KYGR+ ++ + + GFAFV F D RDAEDA+ Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSH 388 DG DG LRV++A GR P+SH Sbjct: 75 MDGAVLDGRELRVQMARYGRP-----PDSH 99
>P30352:SFRS2_CHICK Splicing factor, arginine/serine-rich 2 - Gallus gallus (Chicken)| Length = 221 Score = 55.8 bits (133), Expect = 3e-07 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++ V NL + +F KYGR+ ++ + + GFAFV F D RDAEDA+ Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSH 388 DG DG LRV++A GR P+SH Sbjct: 75 MDGAVLDGRELRVQMARYGRP-----PDSH 99
>Q3MHR5:SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 - Bos taurus (Bovine)| Length = 221 Score = 55.8 bits (133), Expect = 3e-07 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++ V NL + +F KYGR+ ++ + + GFAFV F D RDAEDA+ Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSH 388 DG DG LRV++A GR P+SH Sbjct: 75 MDGAVLDGRELRVQMARYGRP-----PDSH 99
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 55.8 bits (133), Expect = 3e-07 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VG L D E+ +E +F KYG+I E+ + + R GF FV FE+ DA+DA+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 302 DGYNFDGNRLRVELAHGGRANSS 370 +G + DG ++RV+ A N S Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRS 90
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 55.8 bits (133), Expect = 3e-07 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VG L D E+ +E +F KYG+I E+ + + R GF FV FE+ DA+DA+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 302 DGYNFDGNRLRVELAHGGRANSS 370 +G + DG ++RV+ A N S Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRS 90
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 55.8 bits (133), Expect = 3e-07 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VG L D E+ +E +F KYG+I E+ + + R GF FV FE+ DA+DA+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 302 DGYNFDGNRLRVELAHGGRANSS 370 +G + DG ++RV+ A N S Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRS 90
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 55.5 bits (132), Expect = 4e-07 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +YVGNLP D+ +E LF ++G++VE + + R GF FV D + +AI Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305 Query: 302 DGYNFDGNRLRVELA 346 DG N +G +RV +A Sbjct: 306 DGQNLEGRAIRVNVA 320
>Q10193:SRP1_SCHPO Pre-mRNA-splicing factor srp1 - Schizosaccharomyces pombe (Fission| yeast) Length = 275 Score = 54.7 bits (130), Expect = 8e-07 Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Frame = +2 Query: 107 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVP----PRPPGFAFVEFEDPR 274 MSRR RT+YV +R RE+ F +G ++ D+ +P RP FAFVE+ED R Sbjct: 1 MSRRSLRTLYVTGFRDGMRARELAYEFEPFGPLIRCDIPIPRTRTSRP--FAFVEYEDSR 58 Query: 275 DAEDAIQGRDGYNFD--GNRLRVELA 346 DAEDA G + G LRVE A Sbjct: 59 DAEDAYYEVHGRRLERGGGVLRVEWA 84
>Q9UT83:MUG28_SCHPO Meiotically up-regulated gene 28 protein - Schizosaccharomyces| pombe (Fission yeast) Length = 609 Score = 53.1 bits (126), Expect = 2e-06 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%) Frame = +2 Query: 95 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR--------PPGFA 250 K R +++ +IYVGNLP + ++ +LF +G + + + P FA Sbjct: 10 KNKRSTKKCEISIYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFA 69 Query: 251 FVEFEDPRDAEDAIQGRDGYNFDGNRLRVELAH 349 F+ FE+ A++AI +G +F GN L+VE H Sbjct: 70 FITFENKCSADNAIASLNGSSFQGNTLKVEYTH 102 Score = 38.1 bits (87), Expect = 0.074 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 5/77 (6%) Frame = +2 Query: 131 IYVGNLPGDI--REREVEDLFYKYGRIVEIDLKVPPR---PPGFAFVEFEDPRDAEDAIQ 295 ++V NL +I +++E+LF K+GRI L P G+ FV F P +A AI Sbjct: 421 LFVKNLDDNIVGNTQQLEELFSKFGRIKSCTLASYPSTEISKGYGFVSFSHPFEAVQAIN 480 Query: 296 GRDGYNFDGNRLRVELA 346 +G F RL V A Sbjct: 481 TLNGVLFGKKRLFVNYA 497
>P25555:GBP2_YEAST Single-strand telomeric DNA-binding protein GBP2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 427 Score = 53.1 bits (126), Expect = 2e-06 Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 4/172 (2%) Frame = +2 Query: 113 RRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP-RPPGFAFVEFEDPRDAEDA 289 R + +I+V NL D ++++LF G +VE D+ G VEF +DA Sbjct: 118 RNFENSIFVRNLTFDCTPEDLKELFGTVGEVVEADIITSKGHHRGMGTVEFTKNESVQDA 177 Query: 290 IQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 I DG F +L V R ++ + + V + LP S + Sbjct: 178 ISKFDGALFMDRKLMV------RQDNPPPEAAKEFSKKATREEIDNGFEVFIINLPYSMN 231 Query: 470 WQDLKDHMRKAGDVCFSEVYREGGG---TIGIVDYTNYDDMKYAIRKLDDTE 616 WQ LKD ++ G V ++V + G G V Y D+M AI + E Sbjct: 232 WQSLKDMFKECGHVLRADVELDFNGFSRGFGSVIYPTEDEMIRAIDTFNGME 283 Score = 44.7 bits (104), Expect = 8e-04 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 IY NLP ++ DLF G+I +LK +P G A VE+E+ DA+ IQ + Sbjct: 351 IYCSNLPFSTARSDLFDLFGPIGKINNAELKPQENGQPTGVAVVEYENLVDADFCIQKLN 410 Query: 305 GYNFDGNRLRVELA 346 YN+ G L++ A Sbjct: 411 NYNYGGCSLQISYA 424
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 52.8 bits (125), Expect = 3e-06 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVE---IDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +YVGNLP D+ +E LF ++G++V + + R GF FV + DAI Sbjct: 151 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 210 Query: 302 DGYNFDGNRLRVELA 346 DG DG +RV +A Sbjct: 211 DGQTLDGRAVRVNVA 225 Score = 43.9 bits (102), Expect = 0.001 Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 8/167 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKV----PPRPPGFAFVEFEDPRDAEDAIQG 298 ++VGNLP D+ ++ +F G +VEI + R GF FV +AE A++ Sbjct: 57 LFVGNLPYDVDSEKLAGIFDAAG-VVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQD 478 +GY+ DG +L V A R + P RV V LP Sbjct: 116 LNGYDMDGRQLTVNKA-APRGSPERAPRGDF----------EPSCRVYVGNLPWDVDTSR 164 Query: 479 LKDHMRKAGDVCFSEVY--REGGGT--IGIVDYTNYDDMKYAIRKLD 607 L+ + G V + V RE G + G V ++ ++ AI LD Sbjct: 165 LEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALD 211
>Q6IQ97:RBM4_DANRE RNA-binding protein 4 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 419 Score = 52.8 bits (125), Expect = 3e-06 Identities = 42/164 (25%), Positives = 69/164 (42%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 I+VGNL + E+ LF +YG+I E D+ F FV + +A++AIQ Y Sbjct: 4 IFVGNLSPNTTAEEIRSLFSQYGKISECDI-----VKNFGFVHMDSKSEADEAIQNLHHY 58 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 +G + VE++ G S+ L V + SS + Q+L+ Sbjct: 59 MLNGMAMNVEMSKGKPKTSTKLH---------------------VGNISSSCTNQELRAK 97 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 + G V ++ ++ V +D AI LD+T F+ Sbjct: 98 FEEYGPVVECDIVKD----YAFVHMERVEDAMEAISGLDNTAFQ 137 Score = 43.9 bits (102), Expect = 0.001 Identities = 25/75 (33%), Positives = 38/75 (50%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S ++VGN+ +E+ F +YG +VE D+ +AFV E DA +AI G Sbjct: 77 STKLHVGNISSSCTNQELRAKFEEYGPVVECDIV-----KDYAFVHMERVEDAMEAISGL 131 Query: 302 DGYNFDGNRLRVELA 346 D F G + V+L+ Sbjct: 132 DNTAFQGKLMSVKLS 146
>Q9V3G3:PPIE_DROME Peptidyl-prolyl cis-trans isomerase E - Drosophila melanogaster| (Fruit fly) Length = 300 Score = 52.8 bits (125), Expect = 3e-06 Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVP---PRPPGFAFVEFEDPRDAEDAIQ 295 RTIYVG L ++ ER + + F +G I +I + R GFAF+E+E DA AI Sbjct: 6 RTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAID 65 Query: 296 GRDGYNFDGNRLRVELAHGGRANSSS 373 + G +RV LA R S Sbjct: 66 NMNDSELCGRTIRVNLAKPVRVKEDS 91
>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus| musculus (Mouse) Length = 632 Score = 52.8 bits (125), Expect = 3e-06 Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 R+++VGN+P + E +++D+F + G +V L + +P G+ F E++D A A++ Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 296 GRDGYNFDGNRLRVELA 346 +G F G LRV+ A Sbjct: 76 NLNGREFSGRALRVDNA 92
>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo| sapiens (Human) Length = 616 Score = 52.8 bits (125), Expect = 3e-06 Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 R+++VGN+P + E +++D+F + G +V L + +P G+ F E++D A A++ Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 296 GRDGYNFDGNRLRVELA 346 +G F G LRV+ A Sbjct: 76 NLNGREFSGRALRVDNA 92
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 52.4 bits (124), Expect = 4e-06 Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 R+++VGN+P + E +++D+F + G +V L + +P G+ F E++D A A++ Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 296 GRDGYNFDGNRLRVELA 346 +G F G LRV+ A Sbjct: 76 NLNGREFSGRALRVDNA 92
>Q8BIQ5:CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit - Mus musculus (Mouse)| Length = 580 Score = 52.4 bits (124), Expect = 4e-06 Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 R+++VGN+P + E +++D+F + G +V L + +P G+ F E++D A A++ Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 296 GRDGYNFDGNRLRVELA 346 +G F G LRV+ A Sbjct: 76 NLNGREFSGRALRVDNA 92
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 52.4 bits (124), Expect = 4e-06 Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 R+++VGN+P + E +++D+F + G +V L + +P G+ F E++D A A++ Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 296 GRDGYNFDGNRLRVELA 346 +G F G LRV+ A Sbjct: 76 NLNGREFSGRALRVDNA 92
>Q8HXM1:CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit - Bos taurus (Bovine)| Length = 572 Score = 52.4 bits (124), Expect = 4e-06 Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 R+++VGN+P + E +++D+F + G +V L + +P G+ F E++D A A++ Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75 Query: 296 GRDGYNFDGNRLRVELA 346 +G F G LRV+ A Sbjct: 76 NLNGREFSGRALRVDNA 92
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 52.0 bits (123), Expect = 5e-06 Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 9/171 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 I+VGNL + +LF + G + +++ K+ R GF FV + E A Q Sbjct: 89 IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 302 DGYNFDGNRLRVELA--HGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQ 475 +GY DG LRV R NSS NS S + RV V L Sbjct: 149 NGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQD 208 Query: 476 DLKDHMRKAGDVCFSEVY--REGGGT--IGIVDYTNYDDMKYAIRKLDDTE 616 L+ + G V ++V R+ G + G V Y++ +++ AI LD + Sbjct: 209 ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVD 259 Score = 45.4 bits (106), Expect = 5e-04 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S +YVGNL + + +E LF + G++V+ + + R GF FV + + +AI Sbjct: 193 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 252 Query: 293 QGRDGYNFDGNRLRVELA 346 + DG + +G +RV A Sbjct: 253 ESLDGVDLNGRAIRVSPA 270
>Q8R3C6:RBM19_MOUSE Probable RNA-binding protein 19 - Mus musculus (Mouse)| Length = 952 Score = 52.0 bits (123), Expect = 5e-06 Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 11/170 (6%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPG------FAFVEFEDPRDAEDA 289 T+++ NL E ++ +F K G I + G F FVE++ P A+ A Sbjct: 723 TLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKA 782 Query: 290 IQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 ++ G+ DG++L V ++ RA +L ++ + T ++LV +P A+ Sbjct: 783 LKQLQGHTVDGHKLEVRISE--RATKPALTSTRKKQVP----KKQTTSKILVRNIPFQAN 836 Query: 470 WQDLKDHMRKAGDVCFSEVYREGGGT-----IGIVDYTNYDDMKYAIRKL 604 +++++ G++ + ++ GT G VD+ D K A L Sbjct: 837 QREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNAL 886 Score = 41.6 bits (96), Expect = 0.007 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP---RPPGFAFVEFEDPRDAEDAI 292 S ++V NL E ++E LF YG + E+ + +P GFAFV F P A A Sbjct: 399 SGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAY 458 Query: 293 QGRDGYNFDGNRLRV 337 DG F G L V Sbjct: 459 AEVDGQVFQGRMLHV 473
>Q8WXF0:SRR35_HUMAN 35 kDa SR repressor protein - Homo sapiens (Human)| Length = 261 Score = 51.6 bits (122), Expect = 6e-06 Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 3/88 (3%) Frame = +2 Query: 104 RMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVP---PRPPGFAFVEFEDPR 274 R +R + ++++ N+ R ++ F +YG IV++ + + RP GFA+V+FED R Sbjct: 3 RYTRPPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVR 62 Query: 275 DAEDAIQGRDGYNFDGNRLRVELAHGGR 358 DAEDA+ + G ++ ++ A G R Sbjct: 63 DAEDALYNLNRKWVCGRQIEIQFAQGDR 90
>Q9FMP4:PM14_ARATH Pre-mRNA branch site p14-like protein - Arabidopsis thaliana| (Mouse-ear cress) Length = 124 Score = 51.6 bits (122), Expect = 6e-06 Identities = 27/70 (38%), Positives = 40/70 (57%) Frame = +2 Query: 104 RMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAE 283 R+ +R +YV NLP +I E+ D+F KYG I +I + G AFV +ED DA+ Sbjct: 12 RLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKATKGTAFVVYEDIYDAK 71 Query: 284 DAIQGRDGYN 313 +A+ G+N Sbjct: 72 NAVDHLSGFN 81
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 51.6 bits (122), Expect = 6e-06 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +++G L + E +E F KYGRI E+ + + R GF FV FE+ DA+DA+ Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66 Query: 302 DGYNFDGNRLRVELA 346 +G + DG ++RV+ A Sbjct: 67 NGKSVDGRQIRVDQA 81
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 51.2 bits (121), Expect = 8e-06 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S IYVGN+P I + +E LF ++G++V + + R GF FV + DAI Sbjct: 229 SYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAI 288 Query: 293 QGRDGYNFDGNRLRVELA 346 DG + DG +RV +A Sbjct: 289 ANLDGQSLDGRTIRVNVA 306 Score = 38.1 bits (87), Expect = 0.074 Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 8/167 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP----GFAFVEFEDPRDAEDAIQG 298 ++VGNLP D+ + LF + G +VEI + R GF FV +AE A++ Sbjct: 138 LFVGNLPYDVDSEGLARLFEQAG-VVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQD 478 + Y+ +G L V A P + YR+ V +P Sbjct: 197 YNRYDVNGRLLTVNKAARRGERPERPPRTF-----------EQSYRIYVGNIPWGIDDAR 245 Query: 479 LKDHMRKAGDVCFSEVY--REGGGT--IGIVDYTNYDDMKYAIRKLD 607 L+ + G V + V RE G + G V + +M AI LD Sbjct: 246 LEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLD 292
>Q9Y4C8:RBM19_HUMAN Probable RNA-binding protein 19 - Homo sapiens (Human)| Length = 960 Score = 51.2 bits (121), Expect = 8e-06 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 11/170 (6%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPG------FAFVEFEDPRDAEDA 289 T+++ NL D E +++++F K G + + G F FVE+ P A+ A Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790 Query: 290 IQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 ++ G+ DG++L V ++ + +L + T ++LV +P A Sbjct: 791 LKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVP------RKQTTSKILVRNIPFQAH 844 Query: 470 WQDLKDHMRKAGDVCFSEVYREGGGT-----IGIVDYTNYDDMKYAIRKL 604 +++++ G++ + ++ GT G VD+ D K A L Sbjct: 845 SREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 894 Score = 47.0 bits (110), Expect = 2e-04 Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP---RPPGFAFVEFEDPRDAEDAI 292 S ++V NLP E ++E LF KYG + E+ + +P GFAF+ F P A A Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460 Query: 293 QGRDGYNFDGNRLRV 337 DG F G L V Sbjct: 461 SEVDGQVFQGRMLHV 475
>Q29RT0:HNRPG_BOVIN Heterogeneous nuclear ribonucleoprotein G - Bos taurus (Bovine)| Length = 396 Score = 51.2 bits (121), Expect = 8e-06 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +++G L + E+ +E F KYGRI E+ L + + GFAF+ FE P DA+ A++ Sbjct: 10 LFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDM 69 Query: 302 DGYNFDGNRLRVELA 346 +G + DG ++V A Sbjct: 70 NGKSLDGKAIKVAQA 84
>O75526:HNRGT_HUMAN Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Homo| sapiens (Human) Length = 392 Score = 51.2 bits (121), Expect = 8e-06 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +++G L + E+ +E F KYGRIVE+ L + + GFAFV FE P DA+ A + Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDM 69 Query: 302 DGYNFDGNRLRVELA 346 +G + DG ++V A Sbjct: 70 NGKSLDGKAIKVAQA 84
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 50.8 bits (120), Expect = 1e-05 Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 11/173 (6%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 I+VGNLP + +LF + G + +++ K+ R GF FV + E A Q Sbjct: 89 IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLP----NSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 +GY DG LRV NS P NS S + RV V L Sbjct: 149 NGYELDGRALRV--------NSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVD 200 Query: 470 WQDLKDHMRKAGDVCFSEVY--REGGGT--IGIVDYTNYDDMKYAIRKLDDTE 616 L+ + G V ++V R+ G + G V Y++ +++ AI LD + Sbjct: 201 QDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVD 253 Score = 45.4 bits (106), Expect = 5e-04 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S +YVGNL + + +E LF + G++V+ + + R GF FV + + +AI Sbjct: 187 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 246 Query: 293 QGRDGYNFDGNRLRVELA 346 + DG + +G +RV A Sbjct: 247 ESLDGVDLNGRAIRVSPA 264
>Q6AYK1:RNPS1_RAT RNA-binding protein with serine-rich domain 1 - Rattus norvegicus| (Rat) Length = 305 Score = 50.8 bits (120), Expect = 1e-05 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP----GFAFVEFEDPRDAEDAIQG 298 +++G L ++ + + ++F YG+I ID+ V P G+A+VEFE+P +AE A++ Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222 Query: 299 RDGYNFDGNRL 331 DG DG + Sbjct: 223 MDGGQIDGQEI 233
>Q5NVM8:RNPS1_PONPY RNA-binding protein with serine-rich domain 1 - Pongo pygmaeus| (Orangutan) Length = 305 Score = 50.8 bits (120), Expect = 1e-05 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP----GFAFVEFEDPRDAEDAIQG 298 +++G L ++ + + ++F YG+I ID+ V P G+A+VEFE+P +AE A++ Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222 Query: 299 RDGYNFDGNRL 331 DG DG + Sbjct: 223 MDGGQIDGQEI 233
>Q99M28:RNPS1_MOUSE RNA-binding protein with serine-rich domain 1 - Mus musculus| (Mouse) Length = 305 Score = 50.8 bits (120), Expect = 1e-05 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP----GFAFVEFEDPRDAEDAIQG 298 +++G L ++ + + ++F YG+I ID+ V P G+A+VEFE+P +AE A++ Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222 Query: 299 RDGYNFDGNRL 331 DG DG + Sbjct: 223 MDGGQIDGQEI 233
>Q4R5N1:RNPS1_MACFA RNA-binding protein with serine-rich domain 1 - Macaca fascicularis| (Crab eating macaque) (Cynomolgus monkey) Length = 305 Score = 50.8 bits (120), Expect = 1e-05 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP----GFAFVEFEDPRDAEDAIQG 298 +++G L ++ + + ++F YG+I ID+ V P G+A+VEFE+P +AE A++ Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222 Query: 299 RDGYNFDGNRL 331 DG DG + Sbjct: 223 MDGGQIDGQEI 233
>Q15287:RNPS1_HUMAN RNA-binding protein with serine-rich domain 1 - Homo sapiens| (Human) Length = 305 Score = 50.8 bits (120), Expect = 1e-05 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP----GFAFVEFEDPRDAEDAIQG 298 +++G L ++ + + ++F YG+I ID+ V P G+A+VEFE+P +AE A++ Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222 Query: 299 RDGYNFDGNRL 331 DG DG + Sbjct: 223 MDGGQIDGQEI 233
>P19600:HNRPC_XENLA Heterogeneous nuclear ribonucleoprotein C - Xenopus laevis (African| clawed frog) Length = 282 Score = 50.8 bits (120), Expect = 1e-05 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 113 RRWSRTIYVGNLPG-DIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDA 289 R + +++GNL +++ +VE +F KYG+IV + GFAFV+F + R A A Sbjct: 13 RSMNSRVFIGNLNTLVVKKTDVEAIFSKYGKIVGCSVH-----KGFAFVQFSNERTARTA 67 Query: 290 IQGRDGYNFDGNRLRVELAHGGRANSS 370 + G DG G L + LA +AN S Sbjct: 68 VAGEDGRMIAGQVLDINLAAEPKANRS 94
>P36629:U2AF2_SCHPO Splicing factor U2AF 59 kDa subunit - Schizosaccharomyces pombe| (Fission yeast) Length = 517 Score = 50.4 bits (119), Expect = 1e-05 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLK---VPPRPPGFAFVEFEDPRDAEDAIQGR 301 IY+ NLP ++ E +V +L +G ++ L GF F EF++P DAE AI G Sbjct: 312 IYISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKNPSDAEVAISGL 371 Query: 302 DGYNFDGNRLRVELA 346 DG + GN+L + A Sbjct: 372 DGKDTYGNKLHAQFA 386
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 50.1 bits (118), Expect = 2e-05 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 IYVGN+P DI + +E +F ++G++V + + R GF FV + +AI Sbjct: 193 IYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANL 252 Query: 302 DGYNFDGNRLRVELA 346 DG DG +RV A Sbjct: 253 DGQTLDGRTIRVNAA 267 Score = 41.6 bits (96), Expect = 0.007 Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 8/167 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKV----PPRPPGFAFVEFEDPRDAEDAIQG 298 ++VGNLP DI + LF + G +VEI + R GF FV +A+ A++ Sbjct: 99 LFVGNLPYDIDSEGLAQLFQQAG-VVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEL 157 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQD 478 Y+ +G L V A + P + YR+ V +P Sbjct: 158 YSQYDLNGRLLTVNKAAPRGSRPERAPRTF-----------QPTYRIYVGNIPWDIDDAR 206 Query: 479 LKDHMRKAGDVCFSEVY--REGGGT--IGIVDYTNYDDMKYAIRKLD 607 L+ + G V + V RE G + G V ++ +M AI LD Sbjct: 207 LEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLD 253
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 50.1 bits (118), Expect = 2e-05 Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +YVGNL + + +E LF + G++VE + + R GF FV ++ ++ ++AI+ Sbjct: 206 VYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSL 265 Query: 302 DGYNFDGNRLRVELA 346 DG + DG ++RV A Sbjct: 266 DGADLDGRQIRVSEA 280 Score = 48.1 bits (113), Expect = 7e-05 Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 15/177 (8%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VGNLP ++ ++ LF G + +++ K+ R GF FV + E A Q Sbjct: 93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152 Query: 302 DGYNFDGNRLRVELAHG--------GRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLP 457 +GY DG LRV R SS +S + RV V L Sbjct: 153 NGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLS 212 Query: 458 SSASWQDLKDHMRKAGDVCFSEVY--REGGGT--IGIVDYTNYDDMKYAIRKLDDTE 616 L+ + G V + V R+ G + G V Y + +++ AI+ LD + Sbjct: 213 WGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGAD 269
>Q5XG24:RNPS1_XENLA RNA-binding protein with serine-rich domain 1 - Xenopus laevis| (African clawed frog) Length = 283 Score = 50.1 bits (118), Expect = 2e-05 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKV----PPRPPGFAFVEFEDPRDAEDAIQG 298 +++G L ++ + + ++F YG+I ID+ V P G+A+VEFE P +AE A++ Sbjct: 140 VHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKH 199 Query: 299 RDGYNFDGNRL 331 DG DG + Sbjct: 200 MDGGQIDGQEI 210
>Q62504:MINT_MOUSE Msx2-interacting protein - Mus musculus (Mouse)| Length = 3644 Score = 50.1 bits (118), Expect = 2e-05 Identities = 41/160 (25%), Positives = 73/160 (45%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +RT+++GNL ++ ++F ++G IV+ID+K P +AF+++ D AI+ Sbjct: 438 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 497 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 DG NRL++ S+P + V + GL S+ S Q L Sbjct: 498 DGEYLGNNRLKLGF-------GKSMPTN----------------CVWLDGLSSNVSDQYL 534 Query: 482 KDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRK 601 H + G V R G + +V Y+ +D + A+++ Sbjct: 535 TRHFCRYGPVVKVVFDRLKG--MALVLYSEIEDAQAAVKE 572 Score = 40.4 bits (93), Expect = 0.015 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQ 295 R +R ++VGNLP ++RE ++ + F +YGR+ + + +P R F D D + A + Sbjct: 3 RETRHLWVGNLPENVREEKIIEHFKRYGRVESVKI-LPKRGSEGGVAAFVDFVDIKSAQK 61 Query: 296 GRDGYNFDGNR-LRVELAHGGRANSSS 373 + N G+R LR + G S++ Sbjct: 62 AHNSVNKMGDRDLRTDYNEPGTIPSAA 88 Score = 35.4 bits (80), Expect = 0.48 Identities = 18/73 (24%), Positives = 40/73 (54%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++ L ++ ++ + F +YG +V++ V R G A V + + DA+ A++ G Sbjct: 520 VWLDGLSSNVSDQYLTRHFCRYGPVVKV---VFDRLKGMALVLYSEIEDAQAAVKETKGR 576 Query: 311 NFDGNRLRVELAH 349 GN+++V+ A+ Sbjct: 577 KIGGNKIKVDFAN 589
>P59708:PM14_MOUSE Pre-mRNA branch site protein p14 - Mus musculus (Mouse)| Length = 125 Score = 49.3 bits (116), Expect = 3e-05 Identities = 30/86 (34%), Positives = 44/86 (51%) Frame = +2 Query: 104 RMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAE 283 R+ +R +Y+ NLP I E+ D+F KYG I +I + P G A+V +ED DA+ Sbjct: 12 RLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAK 71 Query: 284 DAIQGRDGYNFDGNRLRVELAHGGRA 361 +A G+N L V + RA Sbjct: 72 NACDHLSGFNVCNRYLVVLYYNANRA 97
>Q9Y3B4:PM14_HUMAN Pre-mRNA branch site protein p14 - Homo sapiens (Human)| Length = 125 Score = 49.3 bits (116), Expect = 3e-05 Identities = 30/86 (34%), Positives = 44/86 (51%) Frame = +2 Query: 104 RMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAE 283 R+ +R +Y+ NLP I E+ D+F KYG I +I + P G A+V +ED DA+ Sbjct: 12 RLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAK 71 Query: 284 DAIQGRDGYNFDGNRLRVELAHGGRA 361 +A G+N L V + RA Sbjct: 72 NACDHLSGFNVCNRYLVVLYYNANRA 97
>Q4WJT7:MRD1_ASPFU Multiple RNA-binding domain-containing protein 1 - Aspergillus| fumigatus (Sartorya fumigata) Length = 825 Score = 49.3 bits (116), Expect = 3e-05 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR---PPGFAFVEFEDPRDAED 286 R S ++V NLP D E ++E +F K+G+I EI + R GFA+V++ +P A Sbjct: 298 RLSSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQ 357 Query: 287 AIQGRDGYNFDGNRLRV 337 A + DG +F G + + Sbjct: 358 AYKELDGKHFQGRLMHI 374 Score = 36.2 bits (82), Expect = 0.28 Identities = 35/173 (20%), Positives = 64/173 (36%), Gaps = 11/173 (6%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP--------GFAFVEFEDPRDAE 283 T++V NL ++F V +K P P GF FV+F A+ Sbjct: 598 TLFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRTKAQAQ 657 Query: 284 DAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSS 463 A+ DGY D + L V ++ + +R T ++++ LP Sbjct: 658 AALAAMDGYKLDQHELVVRASNKA---MDAAEERRREDTAKKIAARRT--KIIIKNLPFQ 712 Query: 464 ASWQDLKDHMRKAG---DVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDT 613 A+ +D++ G V + + G D+ + + + A+ L +T Sbjct: 713 ATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDALKNT 765
>Q4R813:HNRGT_MACFA Testis-specific heterogeneous nuclear ribonucleoprotein G-T -| Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 394 Score = 49.3 bits (116), Expect = 3e-05 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +++G L + E+ +E F KYGRIVE+ L + + GFAFV FE P +A+ A + Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARDM 69 Query: 302 DGYNFDGNRLRVELA 346 +G + DG ++V A Sbjct: 70 NGKSLDGKAIKVAQA 84
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 48.9 bits (115), Expect = 4e-05 Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 7/171 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +YVGNLP + ++ ++F + G + +++ +V R GFAFV +A++AI+ Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLF 175 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 DG G ++V R + ++ V + +++ V L + + Q L Sbjct: 176 DGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVD--SPHKLYVANLSWALTSQGL 233 Query: 482 KDHMR-KAGDVCFSEVYREGGGT---IGIVDYTNYDDMKYAIRKLDDTEFK 622 +D + G + +Y G G + +++ + M A+ +++ E + Sbjct: 234 RDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELE 284
>Q9W4D2:RNP4F_DROME RNA-binding protein 4F - Drosophila melanogaster (Fruit fly)| Length = 941 Score = 48.9 bits (115), Expect = 4e-05 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL--KVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 I+V NL + E+ +LF +G I ++ L K+ + G A+VEFE P +A+ A+ GRD Sbjct: 726 IFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKGIAYVEFEKPGEAQRAVAGRD 785 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNS 385 G F G + V +++ +S++ S Sbjct: 786 GCLFKGMNISVAISNPPPRGTSAVKPS 812
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 48.9 bits (115), Expect = 4e-05 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VG L + E+ +ED F +G I E+ + + R GF F+ F +P A DA++ Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67 Query: 302 DGYNFDGNRLRVELAHGGRANSSS 373 +G + DG ++RV+ H G++ S Sbjct: 68 NGESLDGRQIRVD--HAGKSARGS 89
>Q5FVM4:NONO_RAT Non-POU domain-containing octamer-binding protein - Rattus| norvegicus (Rat) Length = 476 Score = 48.5 bits (114), Expect = 5e-05 Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 8/148 (5%) Frame = +2 Query: 95 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPR 274 K G + ++VGNLP DI E E+ LF KYG+ E+ + + GF F+ E Sbjct: 69 KPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH---KDKGFGFIRLETRT 125 Query: 275 DAEDAIQGRDGYNFDGNRLRVELA-HGGRANSSSLPN--SHXXXXXXXXVSRHTEYRVLV 445 AE A D G +LRV A H +LP S+ V E V++ Sbjct: 126 LAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVI 185 Query: 446 T---GLPSSASWQDL--KDHMRKAGDVC 514 G PS + K RKA D C Sbjct: 186 VDDRGRPSGKGIVEFSGKPAARKALDRC 213
>Q5RFL9:NONO_PONPY Non-POU domain-containing octamer-binding protein - Pongo pygmaeus| (Orangutan) Length = 471 Score = 48.5 bits (114), Expect = 5e-05 Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 8/148 (5%) Frame = +2 Query: 95 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPR 274 K G + ++VGNLP DI E E+ LF KYG+ E+ + + GF F+ E Sbjct: 64 KPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH---KDKGFGFIRLETRT 120 Query: 275 DAEDAIQGRDGYNFDGNRLRVELA-HGGRANSSSLPN--SHXXXXXXXXVSRHTEYRVLV 445 AE A D G +LRV A H +LP S+ V E V++ Sbjct: 121 LAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVI 180 Query: 446 T---GLPSSASWQDL--KDHMRKAGDVC 514 G PS + K RKA D C Sbjct: 181 VDDRGRPSGKGIVEFSGKPAARKALDRC 208
>Q99K48:NONO_MOUSE Non-POU domain-containing octamer-binding protein - Mus musculus| (Mouse) Length = 473 Score = 48.5 bits (114), Expect = 5e-05 Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 8/148 (5%) Frame = +2 Query: 95 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPR 274 K G + ++VGNLP DI E E+ LF KYG+ E+ + + GF F+ E Sbjct: 66 KPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH---KDKGFGFIRLETRT 122 Query: 275 DAEDAIQGRDGYNFDGNRLRVELA-HGGRANSSSLPN--SHXXXXXXXXVSRHTEYRVLV 445 AE A D G +LRV A H +LP S+ V E V++ Sbjct: 123 LAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVI 182 Query: 446 T---GLPSSASWQDL--KDHMRKAGDVC 514 G PS + K RKA D C Sbjct: 183 VDDRGRPSGKGIVEFSGKPAARKALDRC 210
>Q15233:NONO_HUMAN Non-POU domain-containing octamer-binding protein - Homo sapiens| (Human) Length = 471 Score = 48.5 bits (114), Expect = 5e-05 Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 8/148 (5%) Frame = +2 Query: 95 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPR 274 K G + ++VGNLP DI E E+ LF KYG+ E+ + + GF F+ E Sbjct: 64 KPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH---KDKGFGFIRLETRT 120 Query: 275 DAEDAIQGRDGYNFDGNRLRVELA-HGGRANSSSLPN--SHXXXXXXXXVSRHTEYRVLV 445 AE A D G +LRV A H +LP S+ V E V++ Sbjct: 121 LAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVI 180 Query: 446 T---GLPSSASWQDL--KDHMRKAGDVC 514 G PS + K RKA D C Sbjct: 181 VDDRGRPSGKGIVEFSGKPAARKALDRC 208
>O13620:MRD1_SCHPO Multiple RNA-binding domain-containing protein 1 -| Schizosaccharomyces pombe (Fission yeast) Length = 833 Score = 48.5 bits (114), Expect = 5e-05 Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 8/136 (5%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP--------GFAFVEFEDPRDAE 283 TIYV NL ++ E + +F + ++ P P GF FVEF+D A Sbjct: 620 TIYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKASAV 679 Query: 284 DAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSS 463 A+ +G+ DG++L ++L+H G ++ + S+ ++L+ LP Sbjct: 680 AAMHAMNGFVLDGHKLEIKLSHQGVDAAAEVRKQDS--------SKPKGTKILIKNLPFE 731 Query: 464 ASWQDLKDHMRKAGDV 511 A+ +D++ + G + Sbjct: 732 ATKKDVQSLLGAYGQL 747 Score = 42.4 bits (98), Expect = 0.004 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 3/155 (1%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR---PPGFAFVEFEDPRDAEDAI 292 ++ +++ NL E +++ LF +G++ ++ + + + P GFA+++F D DA A Sbjct: 322 TKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAY 381 Query: 293 QGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASW 472 D F G L V A +A SS L + + + + E + T S+ SW Sbjct: 382 LELDAKPFQGRLLHVLPA---KARSSILLDDY--ALSKLPLKKQRELKRKNTAASSTFSW 436 Query: 473 QDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYD 577 L A V S R G I+D T+ D Sbjct: 437 NSL---YMNADAVVTSLASRLGVKKTDILDPTSSD 468
>Q96T58:MINT_HUMAN Msx2-interacting protein - Homo sapiens (Human)| Length = 3664 Score = 48.5 bits (114), Expect = 5e-05 Identities = 23/72 (31%), Positives = 42/72 (58%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +RT+++GNL ++ ++F ++G IV+ID+K P +AF+++ D AI+ Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496 Query: 302 DGYNFDGNRLRV 337 DG NRL++ Sbjct: 497 DGEYLGNNRLKL 508 Score = 40.4 bits (93), Expect = 0.015 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQ 295 R +R ++VGNLP ++RE ++ + F +YGR+ + + +P R F D D + A + Sbjct: 3 RETRHLWVGNLPENVREEKIIEHFKRYGRVESVKI-LPKRGSEGGVAAFVDFVDIKSAQK 61 Query: 296 GRDGYNFDGNR-LRVELAHGGRANSSS 373 + N G+R LR + G S++ Sbjct: 62 AHNSVNKMGDRDLRTDYNEPGTIPSAA 88
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 48.5 bits (114), Expect = 5e-05 Identities = 40/159 (25%), Positives = 68/159 (42%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +++GNL + E+ LF KYG +VE D+ + FV E + DAIQ +GY Sbjct: 9 LFIGNLDEKTQATELRALFEKYGTVVECDV-----VKNYGFVHMETEQQGRDAIQNLNGY 63 Query: 311 NFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLKDH 490 + ++VE A RA PN+ ++ V L ++++ Sbjct: 64 TLNEFAIKVEAAKSRRA-----PNT-------------PTTKIFVGNLTDKTRAPEVREL 105 Query: 491 MRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLD 607 +K G V ++ R G V D++ AI++L+ Sbjct: 106 FQKYGTVVECDIVR----NYGFVHLDCVGDVQDAIKELN 140 Score = 48.1 bits (113), Expect = 7e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 I+VGNL R EV +LF KYG +VE D+ + FV + D +DAI+ +G Sbjct: 88 IFVGNLTDKTRAPEVRELFQKYGTVVECDI-----VRNYGFVHLDCVGDVQDAIKELNGR 142 Query: 311 NFDGNRLRVELA 346 DG L+V+++ Sbjct: 143 VVDGQPLKVQVS 154
>Q5RB87:G3BP1_PONPY Ras GTPase-activating protein-binding protein 1 - Pongo pygmaeus| (Orangutan) Length = 466 Score = 48.5 bits (114), Expect = 5e-05 Identities = 19/60 (31%), Positives = 34/60 (56%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S +++GNLP ++ + E++D F YG +VE+ + + P F FV F+D + + R Sbjct: 339 SHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNR 398
>Q13283:G3BP1_HUMAN Ras GTPase-activating protein-binding protein 1 - Homo sapiens| (Human) Length = 466 Score = 48.5 bits (114), Expect = 5e-05 Identities = 19/60 (31%), Positives = 34/60 (56%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S +++GNLP ++ + E++D F YG +VE+ + + P F FV F+D + + R Sbjct: 339 SHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNR 398
>Q32LC7:G3BP1_BOVIN Ras GTPase-activating protein-binding protein 1 - Bos taurus| (Bovine) Length = 465 Score = 48.5 bits (114), Expect = 5e-05 Identities = 19/60 (31%), Positives = 34/60 (56%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S +++GNLP ++ + E++D F YG +VE+ + + P F FV F+D + + R Sbjct: 338 SHQLFIGNLPHEVDKSELKDFFQNYGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNR 397
>P62997:TRA2B_RAT Splicing factor, arginine/serine-rich 10 - Rattus norvegicus (Rat)| Length = 288 Score = 48.1 bits (113), Expect = 7e-05 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%) Frame = +2 Query: 164 EREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGRDGYNFDGNRLR 334 ER++ ++F KYG I ++ + + R GFAFV FE+ DA++A + +G DG R+R Sbjct: 131 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR 190 Query: 335 VELA 346 V+ + Sbjct: 191 VDFS 194
>P62996:TRA2B_MOUSE Splicing factor, arginine/serine-rich 10 - Mus musculus (Mouse)| Length = 288 Score = 48.1 bits (113), Expect = 7e-05 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%) Frame = +2 Query: 164 EREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGRDGYNFDGNRLR 334 ER++ ++F KYG I ++ + + R GFAFV FE+ DA++A + +G DG R+R Sbjct: 131 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR 190 Query: 335 VELA 346 V+ + Sbjct: 191 VDFS 194
>P62995:TRA2B_HUMAN Splicing factor, arginine/serine-rich 10 - Homo sapiens (Human)| Length = 288 Score = 48.1 bits (113), Expect = 7e-05 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%) Frame = +2 Query: 164 EREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGRDGYNFDGNRLR 334 ER++ ++F KYG I ++ + + R GFAFV FE+ DA++A + +G DG R+R Sbjct: 131 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR 190 Query: 335 VELA 346 V+ + Sbjct: 191 VDFS 194
>Q3ZBT6:TRA2B_BOVIN Splicing factor, arginine/serine-rich 10 - Bos taurus (Bovine)| Length = 288 Score = 48.1 bits (113), Expect = 7e-05 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%) Frame = +2 Query: 164 EREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGRDGYNFDGNRLR 334 ER++ ++F KYG I ++ + + R GFAFV FE+ DA++A + +G DG R+R Sbjct: 131 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR 190 Query: 335 VELA 346 V+ + Sbjct: 191 VDFS 194
>Q9VRV7:PM14_DROME Pre-mRNA branch site p14-like protein - Drosophila melanogaster| (Fruit fly) Length = 121 Score = 48.1 bits (113), Expect = 7e-05 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = +2 Query: 104 RMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAE 283 R+ +R +YV NLP I E+ D+F K+G I +I + P G AFV +ED DA+ Sbjct: 8 RLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAK 67 Query: 284 DAIQGRDGYN 313 +A G+N Sbjct: 68 NACDHLSGFN 77
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 48.1 bits (113), Expect = 7e-05 Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 10/177 (5%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP----RPPGFAFVEFEDPRDAE 283 R S+T+ V NL E +++LF K +K+P RP G+AFVEF DA+ Sbjct: 458 RESKTLIVNNLSYAASEETLQELFKK-----ATSIKMPQNNQGRPKGYAFVEFPTAEDAK 512 Query: 284 DAIQGRDGYNFDGNRLRVELA----HGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTG 451 +A+ + +G +R+E + G N+ N +S T L Sbjct: 513 EALNSCNNTEIEGRAIRLEFSSPSWQKGNMNARGGFNQQSKTLFVRGLSEDTTEETLRES 572 Query: 452 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLDDTE 616 S S + + D R+ G + G VD+++ +D K A ++D E Sbjct: 573 FEGSISARIVTD--------------RDTGSSKGFGFVDFSSPEDAKAAKEAMEDGE 615 Score = 47.4 bits (111), Expect = 1e-04 Identities = 37/169 (21%), Positives = 76/169 (44%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQ 295 R +RT++V NLP + E E++++F + V + L G A++EF+ +AE A++ Sbjct: 368 RDARTLFVKNLPYRVTEDEMKNVF-ENALEVRLVLNKEGSSKGMAYIEFKTEAEAEKALE 426 Query: 296 GRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQ 475 + G DG + ++ G ++ S ++V L +AS + Sbjct: 427 EKQGTEVDGRAMVIDYT-GEKSQQESQKGG----------GERESKTLIVNNLSYAASEE 475 Query: 476 DLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 L++ +KA + + + V++ +D K A+ ++TE + Sbjct: 476 TLQELFKKATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIE 524 Score = 35.4 bits (80), Expect = 0.48 Identities = 20/75 (26%), Positives = 35/75 (46%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T++V L D E + + F + + GF FV+F P DA+ A + Sbjct: 552 SKTLFVRGLSEDTTEETLRESFEGSISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAM 611 Query: 302 DGYNFDGNRLRVELA 346 + DGN++ ++ A Sbjct: 612 EDGEIDGNKVTLDFA 626
>P90978:U2AF2_CAEEL Splicing factor U2AF 65 kDa subunit - Caenorhabditis elegans| Length = 496 Score = 47.8 bits (112), Expect = 9e-05 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 3/88 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR--PPGFAFVEFEDPRDAEDAIQGRD 304 I++G LP + E +V++L +G + L V + G+AF E+ DP + AI G + Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352 Query: 305 GYNFDGNRLRVELAHGG-RANSSSLPNS 385 G +L V+LA + ++++LPNS Sbjct: 353 GMQLGDKQLVVQLACANQQRHNTNLPNS 380 Score = 35.0 bits (79), Expect = 0.62 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 9/131 (6%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRP---------PGFAFVEFEDPR 274 SR +YVGN+P E + D F + + + + P P FAF+EF Sbjct: 183 SRRLYVGNIPFGCNEEAMLDFFNQQMHLCGL-AQAPGNPILLCQINLDKNFAFIEFRS-I 240 Query: 275 DAEDAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGL 454 D A DG NF G +L+V + + ++ + V + ++ + GL Sbjct: 241 DETTAGMAFDGINFMGQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVD--SANKIFIGGL 298 Query: 455 PSSASWQDLKD 487 P+ + +K+ Sbjct: 299 PNYLTEDQVKE 309
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 47.8 bits (112), Expect = 9e-05 Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 5/175 (2%) Frame = +2 Query: 107 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDA 280 + ++ S I++ NL DI + + D F +G I+ + + GF FV FE+ A Sbjct: 120 LRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAA 179 Query: 281 EDAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPS 460 ++AI +G +G + V + S L + + +T + V + S Sbjct: 180 KEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETK---------AHYT--NLYVKNINS 228 Query: 461 SASWQDLKDHMRKAGDVCFSEVYREGGGTI---GIVDYTNYDDMKYAIRKLDDTE 616 + + ++ K G + + + ++ G + G V+Y ++D A+ L+D+E Sbjct: 229 ETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSE 283
>P09405:NUCL_MOUSE Nucleolin - Mus musculus (Mouse)| Length = 707 Score = 47.8 bits (112), Expect = 9e-05 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 3/168 (1%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T+ + NL + +E++F K +++ +P G+AF+EF DA++A+ Sbjct: 486 SKTLVLSNLSYSATKETLEEVFEK-ATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSC 544 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 + +G +R+EL +NS S P+ + V GL + + L Sbjct: 545 NKMEIEGRTIRLELQ---GSNSRSQPSK----------------TLFVKGLSEDTTEETL 585 Query: 482 KDHMRKAGDVCFSEVY-REGGGT--IGIVDYTNYDDMKYAIRKLDDTE 616 K+ G V V RE G + G VD+ + +D K A ++D E Sbjct: 586 KESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGE 631 Score = 35.8 bits (81), Expect = 0.36 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = +2 Query: 98 QGRMSRRW-SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPR 274 QG SR S+T++V L D E +++ F R + + GF FV+F Sbjct: 559 QGSNSRSQPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDRETGSSKGFGFVDFNSEE 618 Query: 275 DAEDAIQGRDGYNFDGNRLRVELA 346 DA+ A + + DGN++ ++ A Sbjct: 619 DAKAAKEAMEDGEIDGNKVTLDWA 642 Score = 34.7 bits (78), Expect = 0.81 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Frame = +2 Query: 98 QGRMSR--RWSRTIYVGNLPGDIREREVEDLFYKYG--RIVEIDLKVPPRPPGFAFVEFE 265 +GR S+ R +RT+ NL +I E E++++F R+V D K G A++EF+ Sbjct: 384 KGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDAMEIRLVSQDGK----SKGIAYIEFK 439 Query: 266 DPRDAEDAIQGRDGYNFDG 322 DAE ++ + G DG Sbjct: 440 SEADAEKNLEEKQGAEIDG 458
>Q6FXP4:MRD1_CANGA Multiple RNA-binding domain-containing protein 1 - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 861 Score = 47.8 bits (112), Expect = 9e-05 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRI--VEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 I V NLP + ++V +LF +G++ V + K GFAFVEF P++AE+A+ Sbjct: 740 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFVLPKEAENAMDQLQ 799 Query: 305 GYNFDGNRLRVELAHGGRANS 367 G + G RL ++ A AN+ Sbjct: 800 GVHLLGRRLVMQPAEQEAANA 820 Score = 41.2 bits (95), Expect = 0.009 Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 9/137 (6%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP--------GFAFVEFEDPRDAE 283 +I++ NL +++ D F + V +K P P GF FVEF A Sbjct: 641 SIFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQAT 700 Query: 284 DAIQGRDGYNFDGNRLRVELAH-GGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPS 460 I DG DG++++++L+H G A S + +++V LP Sbjct: 701 AVISAMDGTVIDGHKIQLKLSHRQGNAGSQEKKKAKNG-------------KIIVKNLPF 747 Query: 461 SASWQDLKDHMRKAGDV 511 A+ +D+ + G + Sbjct: 748 EATRKDVFELFNSFGQL 764 Score = 32.7 bits (73), Expect = 3.1 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRP---PGFAFVEFEDPRDAEDAIQGR 301 +++ N+ E + + LF YG + E+ + V R GFA+V F P +A A Sbjct: 327 LFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIEL 386 Query: 302 DGYNFDGNRLRV 337 D F G L + Sbjct: 387 DKQIFQGRLLHI 398
>Q19706:IF34_CAEEL Probable eukaryotic translation initiation factor 3 subunit 4 -| Caenorhabditis elegans Length = 256 Score = 47.8 bits (112), Expect = 9e-05 Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Frame = +2 Query: 110 SRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDA 280 +R T V NLP ++ E E+ DLF K GR++ I + KV P GFAFV FE DA Sbjct: 171 NRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDA 230 Query: 281 EDAI 292 AI Sbjct: 231 ARAI 234
>P97855:G3BP1_MOUSE Ras GTPase-activating protein-binding protein 1 - Mus musculus| (Mouse) Length = 465 Score = 47.8 bits (112), Expect = 9e-05 Identities = 22/73 (30%), Positives = 38/73 (52%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S +++GNLP ++ + E++D F +G +VE+ + + P F FV F+D + + R Sbjct: 337 SHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNR 396 Query: 302 DGYNFDGNRLRVE 340 RL VE Sbjct: 397 PIMFRGAVRLNVE 409
>P90727:U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit - Caenorhabditis briggsae| Length = 488 Score = 47.4 bits (111), Expect = 1e-04 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR--PPGFAFVEFEDPRDAEDAIQGRD 304 I++G LP + E +V++L +G + L V + G+AF E+ DP + AI G + Sbjct: 284 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 343 Query: 305 GYNFDGNRLRVELAHGGRA-NSSSLPNS 385 G +L V+LA + +++ LPNS Sbjct: 344 GMQLGDKQLVVQLACANQTRHNTHLPNS 371 Score = 35.4 bits (80), Expect = 0.48 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRP---------PGFAFVEFEDPR 274 SR +YVGN+P E + D F + + + + P P FAF+EF Sbjct: 174 SRRLYVGNIPFGCNEEAMLDFFNQQMHLCNL-AQAPGNPILLCQINLDKNFAFIEFRS-I 231 Query: 275 DAEDAIQGRDGYNFDGNRLRV 337 D A DG NF G +L+V Sbjct: 232 DETTAGMAFDGINFMGQQLKV 252
>Q66II8:RU17_XENTR U1 small nuclear ribonucleoprotein 70 kDa - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 471 Score = 47.4 bits (111), Expect = 1e-04 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 +T++V + D E ++ F YG I I + K +P G+AF+E+E RD A + Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYK 162 Query: 296 GRDGYNFDGNRLRVELAHG 352 DG DG R+ V++ G Sbjct: 163 HADGKKIDGRRVLVDVERG 181
>Q62376:RU17_MOUSE U1 small nuclear ribonucleoprotein 70 kDa - Mus musculus (Mouse)| Length = 448 Score = 47.4 bits (111), Expect = 1e-04 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 +T++V + D E ++ F YG I I + K +P G+AF+E+E RD A + Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162 Query: 296 GRDGYNFDGNRLRVELAHG 352 DG DG R+ V++ G Sbjct: 163 HADGKKIDGRRVLVDVERG 181
>P08621:RU17_HUMAN U1 small nuclear ribonucleoprotein 70 kDa - Homo sapiens (Human)| Length = 437 Score = 47.4 bits (111), Expect = 1e-04 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 +T++V + D E ++ F YG I I + K +P G+AF+E+E RD A + Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162 Query: 296 GRDGYNFDGNRLRVELAHG 352 DG DG R+ V++ G Sbjct: 163 HADGKKIDGRRVLVDVERG 181
>Q1RMR2:RU17_BOVIN U1 small nuclear ribonucleoprotein 70 kDa - Bos taurus (Bovine)| Length = 439 Score = 47.4 bits (111), Expect = 1e-04 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 +T++V + D E ++ F YG I I + K +P G+AF+E+E RD A + Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162 Query: 296 GRDGYNFDGNRLRVELAHG 352 DG DG R+ V++ G Sbjct: 163 HADGKKIDGRRVLVDVERG 181
>P25299:RNA15_YEAST mRNA 3'-end-processing protein RNA15 - Saccharomyces cerevisiae| (Baker's yeast) Length = 296 Score = 47.4 bits (111), Expect = 1e-04 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP---RPPGFAFVEFEDPRDAEDAI 292 SR +Y+G++P D E ++ DL G ++ + + P R G+AF+EF D + A+ Sbjct: 17 SRVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAV 76 Query: 293 QGRDGYNFDGNRLR 334 + +GY L+ Sbjct: 77 RNLNGYQLGSRFLK 90
>Q8R0F5:RBMX2_MOUSE RNA-binding motif protein, X-linked 2 - Mus musculus (Mouse)| Length = 326 Score = 47.4 bits (111), Expect = 1e-04 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S I+VG LP ++ E ++ +F +YG IV I+L K + GF F+ +ED R A+ Sbjct: 35 SAWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAV 94 Query: 293 QGRDGYNFDGNRLRVELAHGGRANSSS 373 +G G +RV+ RA S Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPQES 121
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 47.4 bits (111), Expect = 1e-04 Identities = 34/163 (20%), Positives = 71/163 (43%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +Y+ N D+ + ++DLF K+G + + + + GF FV FE DA+ A+ + Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G +G ++ V A + L ++R+ + V L + L+ Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRK-FEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 485 DHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLD 607 G + ++V EGG + G V +++ ++ A+ +++ Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354 Score = 37.4 bits (85), Expect = 0.13 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+L D E + + F G I+ I + + R G+A+V F+ P DAE A+ Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL-- 69 Query: 299 RDGYNFD 319 D NFD Sbjct: 70 -DTMNFD 75
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 47.4 bits (111), Expect = 1e-04 Identities = 34/163 (20%), Positives = 71/163 (43%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +Y+ N D+ + ++DLF K+G + + + + GF FV FE DA+ A+ + Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G +G ++ V A + L ++R+ + V L + L+ Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRK-FEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 485 DHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLD 607 G + ++V EGG + G V +++ ++ A+ +++ Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354 Score = 38.9 bits (89), Expect = 0.043 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+L D+ E + + F G I+ I + + R G+A+V F+ P DAE A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL-- 69 Query: 299 RDGYNFD 319 D NFD Sbjct: 70 -DTMNFD 75
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 47.4 bits (111), Expect = 1e-04 Identities = 34/163 (20%), Positives = 71/163 (43%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +Y+ N D+ + ++DLF K+G + + + + GF FV FE DA+ A+ + Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G +G ++ V A + L ++R+ + V L + L+ Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRK-FEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 485 DHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLD 607 G + ++V EGG + G V +++ ++ A+ +++ Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354 Score = 38.9 bits (89), Expect = 0.043 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+L D+ E + + F G I+ I + + R G+A+V F+ P DAE A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL-- 69 Query: 299 RDGYNFD 319 D NFD Sbjct: 70 -DTMNFD 75
>Q5BGA9:MRD1_EMENI Multiple RNA-binding domain-containing protein 1 - Emericella| nidulans (Aspergillus nidulans) Length = 819 Score = 47.4 bits (111), Expect = 1e-04 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR---PPGFAFVEFEDPRDAED 286 R S ++V NL + +E E+E +F +G+I EI + R GFA+V++ DP A + Sbjct: 292 RISARLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVE 351 Query: 287 AIQGRDGYNFDGNRLRV 337 A + DG F G L + Sbjct: 352 AYRNLDGKIFQGRLLHI 368 Score = 35.8 bits (81), Expect = 0.36 Identities = 34/173 (19%), Positives = 66/173 (38%), Gaps = 11/173 (6%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP--------GFAFVEFEDPRDAE 283 T+++ NL + + + F V +K P P GF F +F+ A+ Sbjct: 593 TLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKAQAQ 652 Query: 284 DAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSS 463 A+ +GY D + L V +H G + +R T ++++ LP Sbjct: 653 AALAVMNGYTLDRHTLVVRASHKG---MDAAEERRKEDTAKKIAARRT--KIIIKNLPFQ 707 Query: 464 ASWQDLKDHMRKAG---DVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDT 613 A+ +D++ G V + + G D+ + + + A+ L +T Sbjct: 708 ATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDALKNT 760
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White| mustard) (Brassica hirta) Length = 169 Score = 47.4 bits (111), Expect = 1e-04 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = +2 Query: 134 YVGNLPGDIREREVEDLFYKYGRIVE---IDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 +VG L ER +E F ++G +V+ I+ + R GF FV F+D + +DAI+G + Sbjct: 11 FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 305 GYNFDGNRLRVELA 346 G + DG + V A Sbjct: 71 GQDLDGRSITVNEA 84
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 47.0 bits (110), Expect = 2e-04 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 +YV NLP I + E+E +F KYG IV+ ++ K+ RP G AFV F +A++AI Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAI 246 Score = 38.5 bits (88), Expect = 0.056 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 7/186 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP---GFAFVEFEDPRDAEDAIQGR 301 + V LP D+ +RE+ LF G I + + G+AFV+F DA++AI+ Sbjct: 104 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTV 163 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 +G RL+V A R S+ +++ + VT LP + + +L Sbjct: 164 NGITVRNKRLKVSYA---RPGGESIKDTN----------------LYVTNLPRTITDDEL 204 Query: 482 KDHMRKAGDVCFSEVYRE--GGGTIGI--VDYTNYDDMKYAIRKLDDTEFKNAFSRAPIR 649 + K G++ + R+ G G+ V + ++ + AI L++ + A +R Sbjct: 205 EKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVR 264 Query: 650 VKEYAG 667 + E G Sbjct: 265 LAEEHG 270
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 47.0 bits (110), Expect = 2e-04 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S +YVGNL + + +++LF + G +V+ + + R GF FV + ++ DAI Sbjct: 206 SNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAI 265 Query: 293 QGRDGYNFDGNRLRVELA 346 +G + DG +RV A Sbjct: 266 DSLNGVDLDGRSIRVSAA 283 Score = 45.4 bits (106), Expect = 5e-04 Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 22/184 (11%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VGNLP + + LF + G + +++ K+ R GF FV + E A Q Sbjct: 89 LFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQF 148 Query: 302 DGYNFDGNRLRVELA-----------HGGRANSSSLPNSHXXXXXXXXV----SRHTEYR 436 +GY DG +RV GGR +SS S + R Sbjct: 149 NGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNR 208 Query: 437 VLVTGLPSSASWQDLKDHMRKAGDVCFSEVY--REGGGT--IGIVDYTNYDDMKYAIRKL 604 V V L LK+ + G+V ++V R+ G + G V Y++ ++ AI L Sbjct: 209 VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSL 268 Query: 605 DDTE 616 + + Sbjct: 269 NGVD 272
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 47.0 bits (110), Expect = 2e-04 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S +YVGNL + + +++LF + G +V+ + + R GF FV + ++ DAI Sbjct: 207 SNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAI 266 Query: 293 QGRDGYNFDGNRLRVELA 346 +G + DG +RV A Sbjct: 267 DSLNGIDLDGRSIRVSAA 284 Score = 44.7 bits (104), Expect = 8e-04 Identities = 46/181 (25%), Positives = 73/181 (40%), Gaps = 22/181 (12%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VGNLP + + LF + G + +++ K+ R GF FV + E A Q Sbjct: 90 LFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQF 149 Query: 302 DGYNFDGNRLRVELA-----------HGGRANSSSLPNSHXXXXXXXXV----SRHTEYR 436 +GY DG +RV GGR +SS S + R Sbjct: 150 NGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNR 209 Query: 437 VLVTGLPSSASWQDLKDHMRKAGDVCFSEVY--REGGGT--IGIVDYTNYDDMKYAIRKL 604 V V L LK+ + G+V ++V R+ G + G V Y++ ++ AI L Sbjct: 210 VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSL 269 Query: 605 D 607 + Sbjct: 270 N 270
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 47.0 bits (110), Expect = 2e-04 Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 10/169 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP---RPPGFAFVEFEDPRDAEDAIQGR 301 +YVG++ +++E + F +G I I++ P + GFAFVE+E P A+ A++ Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 +G G ++V S++P + ++ R+ V + S +D+ Sbjct: 192 NGALMGGRNIKV-------GRPSNMPQAQQVIDEVQEEAKSFN-RIYVASIHPDLSEEDI 243 Query: 482 KDHMRKAGDVCFSEVYREGGGT-------IGIVDYTNYDDMKYAIRKLD 607 K G + + ++ + GT G ++Y N M AI ++ Sbjct: 244 KSVFEAFGPILYCKLAQ---GTSLHTHKGYGFIEYANKQAMDEAIASMN 289 Score = 33.1 bits (74), Expect = 2.4 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR---PPGFAFVEFEDPRDAEDAIQGR 301 IYV ++ D+ E +++ +F +G I+ L G+ F+E+ + + ++AI Sbjct: 229 IYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASM 288 Query: 302 DGYNFDGNRLRV 337 + ++ G LRV Sbjct: 289 NLFDLGGQLLRV 300
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 47.0 bits (110), Expect = 2e-04 Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +Y+ N D+ + ++DLF K+G + + + + GF FV FE DA+ A+ + Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G +G ++ V A + L + ++R+ + V L + L+ Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRT-FEQMKQDRITRYQVVNLYVKNLDDGIDDERLR 311 Query: 485 DHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLD 607 G + ++V EGG + G V +++ ++ A+ +++ Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
>Q06106:MRD1_YEAST Multiple RNA-binding domain-containing protein 1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 887 Score = 47.0 bits (110), Expect = 2e-04 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Frame = +2 Query: 110 SRRWSRTIYVGNLPGDIREREVEDLFYKYGRI--VEIDLKVPPRPPGFAFVEFEDPRDAE 283 S + S I V NLP + ++V +LF +G++ V + K GFAFVEF P++AE Sbjct: 758 SNKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAE 817 Query: 284 DAIQGRDGYNFDGNRLRVELA 346 +A+ G + G RL ++ A Sbjct: 818 NAMDQLHGVHLLGRRLVMQYA 838 Score = 42.4 bits (98), Expect = 0.004 Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 8/136 (5%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP--------GFAFVEFEDPRDAE 283 +I++ NL + + D F + V +K P P GF FVEF A Sbjct: 664 SIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723 Query: 284 DAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSS 463 I DG DG++++++L+H + S + S +++V LP Sbjct: 724 AVIAAMDGTVIDGHKIQLKLSHRQASQSGNTKTK----------SNKKSGKIIVKNLPFE 773 Query: 464 ASWQDLKDHMRKAGDV 511 A+ +D+ + G + Sbjct: 774 ATRKDVFELFNSFGQL 789 Score = 32.7 bits (73), Expect = 3.1 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRP---PGFAFVEFEDPRDAEDAIQGR 301 +++ N+ +E + LF +G + E+ + + R GFA+V F+D ++A +A Sbjct: 347 LFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVEL 406 Query: 302 DGYNFDGNRLRV 337 D F G L + Sbjct: 407 DKQIFQGRLLHI 418
>Q42404:RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa - Arabidopsis thaliana| (Mouse-ear cress) Length = 427 Score = 46.6 bits (109), Expect = 2e-04 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 +T++V L + E +++ F YG I + L ++ +P G+AF+E+ RD + A + Sbjct: 138 KTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYK 197 Query: 296 GRDGYNFDGNRLRVELAHG 352 DG DG R+ V++ G Sbjct: 198 QADGQKIDGRRVLVDVERG 216
>Q9WX39:RBPF_ANASP Putative RNA-binding protein rbpF - Anabaena sp. (strain PCC 7120)| Length = 105 Score = 46.6 bits (109), Expect = 2e-04 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 +IYVGNL ++ + ++ ++F +YG + + L + R GFAFVE + AI+G Sbjct: 2 SIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEG 61 Query: 299 RDGYNFDGNRLRVELA 346 DG + G L+V A Sbjct: 62 LDGAEWMGRDLKVNKA 77
>Q8C2Q3:RBM14_MOUSE RNA-binding protein 14 - Mus musculus (Mouse)| Length = 669 Score = 46.6 bits (109), Expect = 2e-04 Identities = 27/82 (32%), Positives = 42/82 (51%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 I+VGN+ +E+ LF + GR++E D+ +AFV E DA+ AI +G Sbjct: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVV-----KDYAFVHMEKEADAKAAIAQLNGK 135 Query: 311 NFDGNRLRVELAHGGRANSSSL 376 G R+ VEL+ G+ +L Sbjct: 136 EVKGKRINVELSTKGQKKGPAL 157
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 46.6 bits (109), Expect = 2e-04 Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +Y+ N D+ + ++++F KYG + + + + GF FV FE DA+ A+ + Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G + +G + V A + L ++R+ + V L + L+ Sbjct: 253 GKDMNGKSMFVGRAQKKVERQTELKRK-FEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 485 DHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLD 607 G + ++V EGG + G V +++ ++ A+ +++ Sbjct: 312 KEFLPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354 Score = 38.9 bits (89), Expect = 0.043 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+L D+ E + + F G I+ I + + R G+A+V F+ P DAE A+ Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL-- 69 Query: 299 RDGYNFD 319 D NFD Sbjct: 70 -DTMNFD 75
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 46.6 bits (109), Expect = 2e-04 Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 6/166 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+L ++ + ++ D F + G +V + + V R G+ +V F +P+DA AIQ Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 96 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQD 478 + G +RV +H V R + + L S + Sbjct: 97 LNYIPLYGKPIRVMYSH-----------------RDPSVRRSGAGNIFIKNLDESIDHKA 139 Query: 479 LKDHMRKAGDVCFSEVYREGGGT---IGIVDYTNYDDMKYAIRKLD 607 L D G++ +V + G G V Y N + + AI KL+ Sbjct: 140 LHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLN 185 Score = 45.4 bits (106), Expect = 5e-04 Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 5/163 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +YV NL + ++++ F +YG+I + + GF FV FE+ DA A++ + Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLN 276 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G+ FD V A + L + + V L S S + LK Sbjct: 277 GHKFDDKEWYVGRAQKKSERETEL-RVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLK 335 Query: 485 DHMRKAGDVCFSEVYREGGGT---IGIVDYTNYDDMKYAIRKL 604 + G V S+V R+ GT G V + ++ A+ +L Sbjct: 336 EIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQL 378
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 46.6 bits (109), Expect = 2e-04 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP---RPPGFAFVEFEDPRDAEDAI 292 S T+++GNL + + +LF K+G +V + + P +P GF +V+F + DA+ A+ Sbjct: 266 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKAL 325 Query: 293 QGRDGYNFDGNRLRVELA------HGGRANS 367 G D +R++ + GGR S Sbjct: 326 DALQGEYIDNRPVRLDFSSPRPNNDGGRGGS 356 Score = 34.7 bits (78), Expect = 0.81 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 TI+VG L I + ++ F G ++ + + R G+ +V+FE+ AE AIQ Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 228 Query: 299 RDGYNFDGNRLRVELA 346 G DG + +++ Sbjct: 229 MQGKEIDGRPINCDMS 244
>Q6CEW9:MRD1_YARLI Multiple RNA-binding domain-containing protein 1 - Yarrowia| lipolytica (Candida lipolytica) Length = 828 Score = 46.6 bits (109), Expect = 2e-04 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Frame = +2 Query: 107 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRP---PGFAFVEFEDPRD 277 +S R + +++ NL +E + LF +YG + E+ L + + GFA V+FEDP + Sbjct: 295 VSIRKTGRLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPEN 354 Query: 278 AEDAIQGRDGYNFDGNRLRV 337 A A + +DG F G L + Sbjct: 355 AIAAYEAQDGKIFQGRLLHI 374 Score = 40.8 bits (94), Expect = 0.011 Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 8/129 (6%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP--------GFAFVEFEDPRD 277 S +++V NL R + D F + +K+ P GF FVEF Sbjct: 604 STSVFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPDSKNKGKFLSMGFGFVEFSSKEA 663 Query: 278 AEDAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLP 457 AE A + DG+ DG++L++++++ G+ ++ + + ++L+ LP Sbjct: 664 AEIAQKAMDGHVLDGHKLQLKISNRGQDEETT------------ETKKAIDSKILIKNLP 711 Query: 458 SSASWQDLK 484 A+ +D++ Sbjct: 712 FEATKKDVQ 720
>Q28G87:LARP7_XENTR La-related protein 7 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 593 Score = 46.6 bits (109), Expect = 2e-04 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 SRT+YV LP ++ +E +F KYG +V + + K P GFAF+EFE A AI Sbjct: 126 SRTVYVELLPKNVTHSWIERVFGKYGMVVYVSIPRYKSTGDPKGFAFIEFETQEQAAKAI 185 Query: 293 Q 295 + Sbjct: 186 E 186
>P78795:IF34_SCHPO Probable eukaryotic translation initiation factor 3 RNA-binding| subunit - Schizosaccharomyces pombe (Fission yeast) Length = 282 Score = 46.6 bits (109), Expect = 2e-04 Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S T+ V NL D RE E+ DLF ++G I + L K R GFAFV + D A A Sbjct: 201 SATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKAR 260 Query: 293 QGRDGYNFDGNRLRVELA 346 DGY ++ LR E + Sbjct: 261 DRLDGYGWNNLILRCEFS 278
>O77768:HNRPC_RABIT Heterogeneous nuclear ribonucleoprotein C - Oryctolagus cuniculus| (Rabbit) Length = 306 Score = 46.6 bits (109), Expect = 2e-04 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +2 Query: 113 RRWSRTIYVGNLPG-DIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDA 289 R + +++GNL +++ +VE +F KYG+IV + GFAFV++ + R+A A Sbjct: 12 RSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH-----KGFAFVQYVNERNARAA 66 Query: 290 IQGRDGYNFDGNRLRVELAHGGRAN 364 + G DG G L + LA + N Sbjct: 67 VAGEDGRMIAGQVLDINLAAEPKVN 91
>Q5RA82:HNRPC_PONPY Heterogeneous nuclear ribonucleoproteins C - Pongo pygmaeus| (Orangutan) Length = 306 Score = 46.6 bits (109), Expect = 2e-04 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +2 Query: 113 RRWSRTIYVGNLPG-DIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDA 289 R + +++GNL +++ +VE +F KYG+IV + GFAFV++ + R+A A Sbjct: 12 RSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH-----KGFAFVQYVNERNARAA 66 Query: 290 IQGRDGYNFDGNRLRVELAHGGRAN 364 + G DG G L + LA + N Sbjct: 67 VAGEDGRMIAGQVLDINLAAEPKVN 91
>Q9Z204:HNRPC_MOUSE Heterogeneous nuclear ribonucleoproteins C1/C2 - Mus musculus| (Mouse) Length = 313 Score = 46.6 bits (109), Expect = 2e-04 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +2 Query: 113 RRWSRTIYVGNLPG-DIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDA 289 R + +++GNL +++ +VE +F KYG+IV + GFAFV++ + R+A A Sbjct: 12 RSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH-----KGFAFVQYVNERNARAA 66 Query: 290 IQGRDGYNFDGNRLRVELAHGGRAN 364 + G DG G L + LA + N Sbjct: 67 VAGEDGRMIAGQVLDINLAAEPKVN 91
>P07910:HNRPC_HUMAN Heterogeneous nuclear ribonucleoproteins C1/C2 - Homo sapiens| (Human) Length = 306 Score = 46.6 bits (109), Expect = 2e-04 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +2 Query: 113 RRWSRTIYVGNLPG-DIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDA 289 R + +++GNL +++ +VE +F KYG+IV + GFAFV++ + R+A A Sbjct: 12 RSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH-----KGFAFVQYVNERNARAA 66 Query: 290 IQGRDGYNFDGNRLRVELAHGGRAN 364 + G DG G L + LA + N Sbjct: 67 VAGEDGRMIAGQVLDINLAAEPKVN 91
>P49310:GRP1_SINAL Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White| mustard) (Brassica hirta) Length = 166 Score = 46.6 bits (109), Expect = 2e-04 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = +2 Query: 134 YVGNLPGDIREREVEDLFYKYGRIVE---IDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 +VG L +R +E F +YG +++ I+ + R GF FV F+D + +DAI+G + Sbjct: 11 FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 305 GYNFDGNRLRVELA 346 G + DG + V A Sbjct: 71 GQDLDGRSITVNEA 84
>Q57014:RBPA_SYNY3 Putative RNA-binding protein rbpA - Synechocystis sp. (strain PCC| 6803) Length = 101 Score = 46.2 bits (108), Expect = 3e-04 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 +IYVGNL D+ E ++ +F +YG + + L + R GF FVE E + AI+ Sbjct: 2 SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEA 61 Query: 299 RDGYNFDGNRLRVELA 346 DG + G L+V A Sbjct: 62 LDGAEWMGRDLKVNKA 77
>Q5RC41:RBM14_PONPY RNA-binding protein 14 - Pongo pygmaeus (Orangutan)| Length = 669 Score = 46.2 bits (108), Expect = 3e-04 Identities = 27/82 (32%), Positives = 41/82 (50%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 I+VGN+ +E+ LF + GR++E D+ +AFV E DA+ AI +G Sbjct: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVV-----KDYAFVHMEKEADAKAAIAQLNGK 135 Query: 311 NFDGNRLRVELAHGGRANSSSL 376 G R+ VEL+ G+ L Sbjct: 136 EVKGKRINVELSTKGQKKGPGL 157
>Q96PK6:RBM14_HUMAN RNA-binding protein 14 - Homo sapiens (Human)| Length = 669 Score = 46.2 bits (108), Expect = 3e-04 Identities = 27/82 (32%), Positives = 41/82 (50%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 I+VGN+ +E+ LF + GR++E D+ +AFV E DA+ AI +G Sbjct: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVV-----KDYAFVHMEKEADAKAAIAQLNGK 135 Query: 311 NFDGNRLRVELAHGGRANSSSL 376 G R+ VEL+ G+ L Sbjct: 136 EVKGKRINVELSTKGQKKGPGL 157
>Q5EA36:RBM14_BOVIN RNA-binding protein 14 - Bos taurus (Bovine)| Length = 669 Score = 46.2 bits (108), Expect = 3e-04 Identities = 27/82 (32%), Positives = 41/82 (50%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 I+VGN+ +E+ LF + GR++E D+ +AFV E DA+ AI +G Sbjct: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVV-----KDYAFVHMEKEADAKAAIAQLNGK 135 Query: 311 NFDGNRLRVELAHGGRANSSSL 376 G R+ VEL+ G+ L Sbjct: 136 EVKGKRINVELSTKGQKKGPGL 157
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 46.2 bits (108), Expect = 3e-04 Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 8/173 (4%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRP----PGFAFVEFEDPRDAEDA 289 S+T+ + NL E ++++F K I KVP P G+AF+EF DA++A Sbjct: 488 SKTLVLSNLSYSATEETLQEVFEKATFI-----KVPQNPHGKSKGYAFIEFASFEDAKEA 542 Query: 290 IQGRDGYNFDGNRLRVEL-AHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSA 466 + + +G +R+EL G N+ S P+ + V GL Sbjct: 543 LNSCNKMEIEGRTIRLELQGPRGSPNARSQPSK----------------TLFVKGLSEDT 586 Query: 467 SWQDLKDHMRKAGDVCFSEVY-REGGGT--IGIVDYTNYDDMKYAIRKLDDTE 616 + + LK+ G V V RE G + G VD+ + +D K A ++D E Sbjct: 587 TEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGE 637 Score = 38.9 bits (89), Expect = 0.043 Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 4/188 (2%) Frame = +2 Query: 98 QGRMSR--RWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL-KVPPRPPGFAFVEFED 268 +GR S+ R +RT+ NL +I E E++++F VEI L R G A++EF+ Sbjct: 386 KGRDSKKVRAARTLLAKNLSFNITEDELKEVFED---AVEIRLVSQDGRSKGIAYIEFKS 442 Query: 269 PRDAEDAIQGRDGYNFDGNRLRV-ELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLV 445 DAE ++ + G DG + + G+ + NS V + Y Sbjct: 443 EADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSY---- 498 Query: 446 TGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKN 625 SA+ + L++ KA + + +++ +++D K A+ + E + Sbjct: 499 -----SATEETLQEVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEG 553 Query: 626 AFSRAPIR 649 R ++ Sbjct: 554 RTIRLELQ 561 Score = 35.0 bits (79), Expect = 0.62 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T++V L D E +++ F R + + GF FV+F DA+ A + Sbjct: 574 SKTLFVKGLSEDTTEETLKESFEGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 633 Query: 302 DGYNFDGNRLRVELA 346 + DGN++ ++ A Sbjct: 634 EDGEIDGNKVTLDWA 648
>Q6DJI9:ZCRB1_XENLA Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Xenopus laevis (African clawed frog) Length = 218 Score = 45.8 bits (107), Expect = 4e-04 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 T+YV NLP + ++ +F KYG++V++ + K + G +FV F D A++ ++G Sbjct: 11 TVYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRKSKGVSFVLFLDKESAQNCVRG 70 Query: 299 RDGYNFDGNRLRVELA-HGGRA 361 + G ++ +A GRA Sbjct: 71 LNNKQLFGRAIKASIAKDNGRA 92
>O60176:YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c - Schizosaccharomyces| pombe (Fission yeast) Length = 473 Score = 45.8 bits (107), Expect = 4e-04 Identities = 30/84 (35%), Positives = 45/84 (53%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDG 307 T++VG L + E E++ LF +G IV + K+PP G FV+F + + AE AI G Sbjct: 304 TVFVGGLSKFVSEEELKYLFQNFGEIVYV--KIPPGK-GCGFVQFVNRQSAEIAINQLQG 360 Query: 308 YNFDGNRLRVELAHGGRANSSSLP 379 Y +R+R L+ G N + P Sbjct: 361 YPLGNSRIR--LSWGRNQNPIAAP 382
>P19018:TRA2_DROME Transformer-2 sex-determining protein - Drosophila melanogaster| (Fruit fly) Length = 264 Score = 45.8 bits (107), Expect = 4e-04 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP---RPPGFAFVEFEDPRDAEDAI 292 SR I V L + + +V +LF KYG I I + + R GF F+ FE DA A Sbjct: 96 SRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAK 155 Query: 293 QGRDGYNFDGNRLRVELAHGGRANS 367 G DG R+RV+ + RA++ Sbjct: 156 DSCSGIEVDGRRIRVDFSITQRAHT 180
>Q00916:RU17_YEAST U1 small nuclear ribonucleoprotein 70 kDa homolog - Saccharomyces| cerevisiae (Baker's yeast) Length = 300 Score = 45.8 bits (107), Expect = 4e-04 Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 RTI++G LP D+ E E++ F K+G I +I + K+ + G+AF+ F+DP ++ A + Sbjct: 107 RTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFK 166
>Q9Y388:RBMX2_HUMAN RNA-binding motif protein, X-linked 2 - Homo sapiens (Human)| Length = 322 Score = 45.8 bits (107), Expect = 4e-04 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S I++G LP ++ E ++ +F +YG IV I+L K + GF F+ +ED R A+ Sbjct: 35 SAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAV 94 Query: 293 QGRDGYNFDGNRLRVELAHGGRANSSS 373 +G G +RV+ RA S Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDS 121
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 45.8 bits (107), Expect = 4e-04 Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +Y+ N D+ + +++LF K+G + + + + GF FV FE DA+ A+ + Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G +G ++ V A + L ++R+ + V L + L+ Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRK-FEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 485 DHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLD 607 G + ++V EGG + G V +++ ++ A+ +++ Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354 Score = 38.9 bits (89), Expect = 0.043 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+L D+ E + + F G I+ I + + R G+A+V F+ P DAE A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL-- 69 Query: 299 RDGYNFD 319 D NFD Sbjct: 70 -DTMNFD 75
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 45.8 bits (107), Expect = 4e-04 Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +Y+ N D+ + +++LF K+G + + + + GF FV FE DA+ A+ + Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G +G ++ V A + L ++R+ + V L + L+ Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRK-FEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 485 DHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLD 607 G + ++V EGG + G V +++ ++ A+ +++ Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354 Score = 38.9 bits (89), Expect = 0.043 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+L D+ E + + F G I+ I + + R G+A+V F+ P DAE A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL-- 69 Query: 299 RDGYNFD 319 D NFD Sbjct: 70 -DTMNFD 75
>P08199:NUCL_MESAU Nucleolin - Mesocricetus auratus (Golden hamster)| Length = 714 Score = 45.8 bits (107), Expect = 4e-04 Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 4/169 (2%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T+ + NL E ++++F K +++ + G+AF+EF DA++A+ Sbjct: 485 SKTLVLSNLSYSATEETLQEVFEK-ATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSC 543 Query: 302 DGYNFDGNRLRVEL-AHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQD 478 + +G +R+EL G N+ S P+ + V GL + + Sbjct: 544 NKMEIEGRTIRLELQGPRGSPNARSQPSK----------------TLFVKGLSEDTTEET 587 Query: 479 LKDHMRKAGDVCFSEVY-REGGGT--IGIVDYTNYDDMKYAIRKLDDTE 616 LK+ G V V RE G + G VD+ + +D K A ++D E Sbjct: 588 LKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGE 634 Score = 37.7 bits (86), Expect = 0.096 Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 4/188 (2%) Frame = +2 Query: 98 QGRMSR--RWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL-KVPPRPPGFAFVEFED 268 +GR S+ R +RT+ NL +I E E++++F +EI L + G A++EF+ Sbjct: 383 KGRDSKKVRAARTLLAKNLSFNITEDELKEVFED---ALEIRLVSQDGKSKGIAYIEFKS 439 Query: 269 PRDAEDAIQGRDGYNFDGNRLRV-ELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLV 445 DAE ++ + G DG + + G+ + NS V + Y Sbjct: 440 EADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSY---- 495 Query: 446 TGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKN 625 SA+ + L++ KA + + + +++ +++D K A+ + E + Sbjct: 496 -----SATEETLQEVFEKATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEG 550 Query: 626 AFSRAPIR 649 R ++ Sbjct: 551 RTIRLELQ 558 Score = 35.0 bits (79), Expect = 0.62 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T++V L D E +++ F R + + GF FV+F DA+ A + Sbjct: 571 SKTLFVKGLSEDTTEETLKESFEGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 630 Query: 302 DGYNFDGNRLRVELA 346 + DGN++ ++ A Sbjct: 631 EDGEIDGNKVTLDWA 645
>Q6CQR6:MRD1_KLULA Multiple RNA-binding domain-containing protein 1 - Kluyveromyces| lactis (Yeast) (Candida sphaerica) Length = 878 Score = 45.8 bits (107), Expect = 4e-04 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRI--VEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 I V NLP + ++V +LF +G++ V + K GFAFVEF P++AE+A+ Sbjct: 754 IIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQ 813 Query: 305 GYNFDGNRLRVE 340 G + G RL +E Sbjct: 814 GVHLLGRRLVME 825 Score = 40.4 bits (93), Expect = 0.015 Identities = 26/126 (20%), Positives = 56/126 (44%), Gaps = 8/126 (6%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP--------GFAFVEFEDPRDAE 283 +I++ NL +++ + F + V +K P P GF F EF+ A Sbjct: 652 SIFIKNLNFSTTSQQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMGFGFAEFKTKEQAN 711 Query: 284 DAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSS 463 I +G DG++L+++L+H ++++ + + + +++V LP Sbjct: 712 AVISAMEGTILDGHKLQLKLSHRQGTSTTNASSKK---------KKKNQGKIIVKNLPFE 762 Query: 464 ASWQDL 481 A+ +D+ Sbjct: 763 ATRKDV 768
>Q03250:GRP7_ARATH Glycine-rich RNA-binding protein 7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 176 Score = 45.8 bits (107), Expect = 4e-04 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = +2 Query: 134 YVGNLPGDIREREVEDLFYKYGRIVE---IDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 +VG L +R +E F +YG +++ I+ + R GF FV F+D + +DAI+G + Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70 Query: 305 GYNFDGNRLRVELA 346 G + DG + V A Sbjct: 71 GQDLDGRSITVNEA 84
>O02008:TRA2_DROVI Transformer-2 sex-determining protein - Drosophila virilis (Fruit| fly) Length = 272 Score = 45.4 bits (106), Expect = 5e-04 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 3/94 (3%) Frame = +2 Query: 95 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP---RPPGFAFVEFE 265 +Q R + SR I V L + +++V +LF K+G I I + + R GF F+ FE Sbjct: 95 RQARDHPQASRCIGVFGLNTNTTQQKVRELFNKFGPIERIQMVIDAHTHRSRGFCFIYFE 154 Query: 266 DPRDAEDAIQGRDGYNFDGNRLRVELAHGGRANS 367 + DA A G DG R+RV+ + RA++ Sbjct: 155 NLGDARVAKDACTGMEVDGRRIRVDYSITQRAHT 188
>P40561:SGN1_YEAST RNA-binding protein SGN1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 250 Score = 45.4 bits (106), Expect = 5e-04 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 SR+I+VGN+ D+ ++ED F G+I I L + P G+ ++EFE P E A+ Sbjct: 63 SRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKAL 122 Query: 293 QGRDGYNFDGNRLRV 337 Q +G G ++ V Sbjct: 123 Q-LNGGELKGKKIAV 136
>Q15414:RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 - Homo| sapiens (Human) Length = 496 Score = 45.4 bits (106), Expect = 5e-04 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL--KVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 +++G L + E+ ++ +F K+G I E+ L + GFAF+ FE+P DA++A + + Sbjct: 10 LFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMN 69 Query: 305 GYNFDGNRLRVELA 346 G + G ++VE A Sbjct: 70 GKSLHGKAIKVEQA 83
>Q44554:RBPB_ANASP Putative RNA-binding protein rbpB - Anabaena sp. (strain PCC 7120)| Length = 103 Score = 45.4 bits (106), Expect = 5e-04 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKV---PPRPPGFAFVEFEDPRDAEDAIQG 298 +IYVGNL D+ E + +F +YG + + L V R GF FVE + AI+ Sbjct: 2 SIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEA 61 Query: 299 RDGYNFDGNRLRVELA 346 DG + G L+V A Sbjct: 62 LDGAEWMGRDLKVNKA 77
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 45.4 bits (106), Expect = 5e-04 Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 6/165 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPG----FAFVEFEDPRDAEDAIQG 298 IYV NLP D+ E+ ++DLF ++G+++ + KV G F FV FE +A+ A+ Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSV--KVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250 Query: 299 RDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQD 478 +G G L A R + + R+ + V L S Sbjct: 251 MNGKEVSGRLLYAGRAQ-KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309 Query: 479 LKDHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLD 607 L+ G + ++V EGG + G V +++ ++ A+ +++ Sbjct: 310 LRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354 Score = 36.2 bits (82), Expect = 0.28 Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 1/99 (1%) Frame = +2 Query: 95 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVP-PRPPGFAFVEFEDP 271 KQ R+ R +YV NL I + ++ F YG I + GF FV F P Sbjct: 284 KQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSP 343 Query: 272 RDAEDAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSH 388 +A A+ +G L V LA + L N + Sbjct: 344 EEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382 Score = 35.8 bits (81), Expect = 0.36 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+L D+ E + + F G I+ I + R G+A++ F+ P DAE A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71 Query: 299 RDGYNFDGNRLRV 337 + G +R+ Sbjct: 72 MNFEMLKGQPIRI 84
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 45.4 bits (106), Expect = 5e-04 Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 5/164 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL--KVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 +Y+ NL +I E+E DLF ++G I + L +P GF FV + + A+ A+ + Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELN 322 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 + G +L V A L ++++ + + L + LK Sbjct: 323 DKEYKGKKLYVGRAQKKHEREEEL-RKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLK 381 Query: 485 DHMRKAGDVCFSEVYREGGGT---IGIVDYTNYDDMKYAIRKLD 607 G + +++ + G G V YT ++ A+ +++ Sbjct: 382 AEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMN 425 Score = 38.9 bits (89), Expect = 0.043 Identities = 33/169 (19%), Positives = 69/169 (40%), Gaps = 5/169 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +++ NL I + + D F +G+I+ + V G+ FV F+ A AI+ + Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVN 229 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G + ++ V R S + + V + L + + Q+ Sbjct: 230 GMLLNDKKVYVGHHVSRRERQSKVE-----------ALKANFTNVYIKNLDTEITEQEFS 278 Query: 485 DHMRKAGDVCFSEVYREGGGT---IGIVDYTNYDDMKYAIRKLDDTEFK 622 D + G++ + ++ G V+Y N++ + A+ +L+D E+K Sbjct: 279 DLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYK 327 Score = 32.7 bits (73), Expect = 3.1 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S ++YVG L + E + +LF G + I + V R G+A+V F + D E A+ Sbjct: 79 SASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKAL 138
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 45.4 bits (106), Expect = 5e-04 Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 6/171 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP---RPPGFAFVEFEDPRDAEDAI 292 S+ + V NL E + ++F K +++P R GFAF+EF DA+DA+ Sbjct: 414 SKVLVVNNLSYSATEDSLREVFEK-----ATSIRIPQNQGRAKGFAFIEFSSAEDAKDAM 468 Query: 293 QGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASW 472 + +G +R+E + GG S + V GL + Sbjct: 469 DSCNNTEIEGRSIRLEFSQGGGPQGGGRGGS------------AQSKTLFVRGLSEDTTE 516 Query: 473 QDLKDHMRKAGDVCFSEVYREGGGT---IGIVDYTNYDDMKYAIRKLDDTE 616 + LK+ G V V G G VD++ +D K A ++D E Sbjct: 517 ETLKEAF--DGSVNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGE 565 Score = 42.7 bits (99), Expect = 0.003 Identities = 35/169 (20%), Positives = 72/169 (42%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQ 295 R SRT++V N+P E++++F + + + I G A+VEF + +A A++ Sbjct: 322 RDSRTLFVKNIPYSTTVEELQEIF-ENAKDIRIPTGKDGSNKGIAYVEFSNEDEANKALE 380 Query: 296 GRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQ 475 + G +G + V+ NS + ++V L SA+ Sbjct: 381 EKQGAEIEGRSIFVDFTGEKSQNSGNKKGPEGDSKV-----------LVVNNLSYSATED 429 Query: 476 DLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFK 622 L++ KA + + G +++++ +D K A+ ++TE + Sbjct: 430 SLREVFEKATSIRIPQNQGRAKG-FAFIEFSSAEDAKDAMDSCNNTEIE 477 Score = 34.7 bits (78), Expect = 0.81 Identities = 21/82 (25%), Positives = 37/82 (45%) Frame = +2 Query: 101 GRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDA 280 GR S+T++V L D E +++ F + + GF FV+F DA Sbjct: 495 GRGGSAQSKTLFVRGLSEDTTEETLKEAFDGSVNARIVTDRDTGASKGFGFVDFSTAEDA 554 Query: 281 EDAIQGRDGYNFDGNRLRVELA 346 + A + + DGN++ ++ A Sbjct: 555 KAAKEAMEDGEIDGNKVTLDFA 576
>Q75A83:MRD1_ASHGO Multiple RNA-binding domain-containing protein 1 - Ashbya gossypii| (Yeast) (Eremothecium gossypii) Length = 838 Score = 45.4 bits (106), Expect = 5e-04 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Frame = +2 Query: 113 RRWSRTIYVGNLPGDIREREVEDLFYKYGRI--VEIDLKVPPRPPGFAFVEFEDPRDAED 286 ++ S I V NLP + ++V +LF +G++ V + K GFAFVEF P +AE+ Sbjct: 708 KKISGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPSEAEN 767 Query: 287 AIQGRDGYNFDGNRLRVELA 346 A+ G + G RL ++ A Sbjct: 768 AMDQLQGVHLLGRRLVMQYA 787 Score = 41.6 bits (96), Expect = 0.007 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 8/126 (6%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP--------GFAFVEFEDPRDAE 283 +I+V NL ++ + F + V +K P P GF F+EF A Sbjct: 613 SIFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKLSMGFGFIEFRTKEQAG 672 Query: 284 DAIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSS 463 I DG DG++++++++H SSLP + + +++V LP Sbjct: 673 AVIAAMDGAVIDGHKIQLKISH----KQSSLPKTSKGS------KKKISGKIIVKNLPFE 722 Query: 464 ASWQDL 481 A+ +D+ Sbjct: 723 ATRKDV 728 Score = 39.7 bits (91), Expect = 0.025 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRP---PGFAFVEFEDPRDAEDAIQGR 301 +++ N+ D E + + LF YG + E+ + V R GFA+V F+DP A +A Sbjct: 303 LFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIEL 362 Query: 302 DGYNFDGNRLRV 337 D F G L + Sbjct: 363 DKQIFQGRLLHI 374
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 45.1 bits (105), Expect = 6e-04 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +YVGNL + + +E+LF + G++VE + + R GF FV ++ + AI Sbjct: 259 LYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSL 318 Query: 302 DGYNFDGNRLRVELA 346 +G + DG ++RV A Sbjct: 319 NGADLDGRQIRVSEA 333 Score = 43.1 bits (100), Expect = 0.002 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VGNL ++ ++ LF G + +++ KV R GF FV + E A Q Sbjct: 101 LFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQF 160 Query: 302 DGYNFDGNRLRV 337 +GY F+G LRV Sbjct: 161 NGYEFEGRPLRV 172
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 45.1 bits (105), Expect = 6e-04 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 3/80 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VG L + E+ +ED F +G I E+ + + R GF F+ F +P A A++ Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67 Query: 302 DGYNFDGNRLRVELAHGGRA 361 +G + DG ++RV+ H G++ Sbjct: 68 NGESLDGRQIRVD--HAGKS 85
>Q8ITY4:PM14_CAEEL Pre-mRNA branch site p14-like protein - Caenorhabditis elegans| Length = 138 Score = 45.1 bits (105), Expect = 6e-04 Identities = 25/72 (34%), Positives = 38/72 (52%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +R +Y+ NLP I E+ ++F K+G + +I + G AFV +ED DA+ A + Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTACEHL 77 Query: 302 DGYNFDGNRLRV 337 GYN L V Sbjct: 78 SGYNVSNRYLVV 89
>Q10572:FOX1_CAEEL Sex determination protein fox-1 - Caenorhabditis elegans| Length = 415 Score = 45.1 bits (105), Expect = 6e-04 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR-PPGFAFVEFEDPRDAEDAIQGR 301 + ++V N+P R+ +++ +F K+G + ++++ R GF FV E P+DAE A Q Sbjct: 153 KRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQEL 212 Query: 302 DGYNFDGNRLRVELA 346 G +G ++ V A Sbjct: 213 HGSMIEGRKIEVNCA 227
>Q8SX83:SPEN_DROME Protein split ends - Drosophila melanogaster (Fruit fly)| Length = 5560 Score = 44.7 bits (104), Expect = 8e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +RT+++GNL DI E+ F +G I+EID+K +AF ++ D A++ Sbjct: 655 TRTLFIGNLEKDITAGELRSHFEAFGEIIEIDIK-KQGLNAYAFCQYSDIVSVVKAMRKM 713 Query: 302 DGYNFDGNRLRV 337 DG + NR+++ Sbjct: 714 DGEHLGSNRIKL 725
>Q8VIJ6:SFPQ_MOUSE Splicing factor, proline- and glutamine-rich - Mus musculus (Mouse)| Length = 699 Score = 44.7 bits (104), Expect = 8e-04 Identities = 28/72 (38%), Positives = 37/72 (51%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 ++VGNLP DI E E + LF KYG E+ + + GF F++ E AE A D Sbjct: 291 LFVGNLPADITEDEFKRLFAKYGEPGEVFIN---KGKGFGFIKLESRALAEIAKAELDDT 347 Query: 311 NFDGNRLRVELA 346 G +LRV A Sbjct: 348 PMRGRQLRVRFA 359
>P23246:SFPQ_HUMAN Splicing factor, proline- and glutamine-rich - Homo sapiens (Human)| Length = 707 Score = 44.7 bits (104), Expect = 8e-04 Identities = 28/72 (38%), Positives = 37/72 (51%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 ++VGNLP DI E E + LF KYG E+ + + GF F++ E AE A D Sbjct: 299 LFVGNLPADITEDEFKRLFAKYGEPGEVFIN---KGKGFGFIKLESRALAEIAKAELDDT 355 Query: 311 NFDGNRLRVELA 346 G +LRV A Sbjct: 356 PMRGRQLRVRFA 367
>P09406:RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa - Xenopus laevis (African| clawed frog) Length = 471 Score = 44.7 bits (104), Expect = 8e-04 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL------KVPPRPPGFAFVEFEDPRDAED 286 +T++V + D E ++ F YG I I + + +P G+AF+E+E RD Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHS 162 Query: 287 AIQGRDGYNFDGNRLRVELAHG 352 A + DG DG R+ V++ G Sbjct: 163 AYKHADGKKIDGRRVLVDVERG 184
>Q9WX37:RBPE_ANASP Putative RNA-binding protein rbpE - Anabaena sp. (strain PCC 7120)| Length = 99 Score = 44.7 bits (104), Expect = 8e-04 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 +IYVGNL + + ++ +F +YG + + L + R GF FVE E + AIQ Sbjct: 2 SIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQA 61 Query: 299 RDGYNFDGNRLRVELA 346 DG + G L+V A Sbjct: 62 LDGAEWMGRVLKVNKA 77
>Q9QZH3:PPIE_MOUSE Peptidyl-prolyl cis-trans isomerase E - Mus musculus (Mouse)| Length = 301 Score = 44.7 bits (104), Expect = 8e-04 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 3/86 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVP---PRPPGFAFVEFEDPRDAEDAIQ 295 R +YVG L ++ ++ + F +G I +I + + + GFAFVEFE DA AI Sbjct: 6 RVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 65 Query: 296 GRDGYNFDGNRLRVELAHGGRANSSS 373 + G +RV LA R S Sbjct: 66 NMNESELFGRTIRVNLAKPMRIKEGS 91
>Q9UNP9:PPIE_HUMAN Peptidyl-prolyl cis-trans isomerase E - Homo sapiens (Human)| Length = 301 Score = 44.7 bits (104), Expect = 8e-04 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 3/86 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVP---PRPPGFAFVEFEDPRDAEDAIQ 295 R +YVG L ++ ++ + F +G I +I + + + GFAFVEFE DA AI Sbjct: 6 RVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 65 Query: 296 GRDGYNFDGNRLRVELAHGGRANSSS 373 + G +RV LA R S Sbjct: 66 NMNESELFGRTIRVNLAKPMRIKEGS 91
>Q44556:RBPD_ANASP Putative RNA-binding protein rbpD - Anabaena sp. (strain PCC 7120)| Length = 94 Score = 44.3 bits (103), Expect = 0.001 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 TIYVGNL E +++ +F YG + + L + R GFAFVE + + AI Sbjct: 2 TIYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITE 61 Query: 299 RDGYNFDGNRLRVELA 346 DG + G +LRV A Sbjct: 62 LDGAEWMGRQLRVNKA 77
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 44.3 bits (103), Expect = 0.001 Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 4/169 (2%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T+ + NL E ++++F K +++ + G+AF+EF DA++A+ Sbjct: 487 SKTLVLSNLSYSATEETLQEVFEK-ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 545 Query: 302 DGYNFDGNRLRVEL-AHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQD 478 + +G +R+EL G N+ S P+ + V GL + + Sbjct: 546 NKREIEGRAIRLELQGPRGSPNARSQPSK----------------TLFVKGLSEDTTEET 589 Query: 479 LKDHMRKAGDVCFSEVY-REGGGT--IGIVDYTNYDDMKYAIRKLDDTE 616 LK+ G V V RE G + G VD+ + +D K A ++D E Sbjct: 590 LKESF--DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGE 636 Score = 38.1 bits (87), Expect = 0.074 Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 2/180 (1%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYG--RIVEIDLKVPPRPPGFAFVEFEDPRDAEDA 289 R +RT+ NLP + + E++++F R+V D K G A++EF+ DAE Sbjct: 392 RDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGK----SKGIAYIEFKTEADAEKT 447 Query: 290 IQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 + + G DG + L + G N S ++ VL + L SA+ Sbjct: 448 FEEKQGTEIDGR--SISLYYTGEKGQ----NQDYRGGKNSTWSGESKTLVL-SNLSYSAT 500 Query: 470 WQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIR 649 + L++ KA + + +++ +++D K A+ + E + R ++ Sbjct: 501 EETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQ 560 Score = 34.7 bits (78), Expect = 0.81 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T++V L D E +++ F R + + GF FV+F DA+ A + Sbjct: 573 SKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 632 Query: 302 DGYNFDGNRLRVELA 346 + DGN++ ++ A Sbjct: 633 EDGEIDGNKVTLDWA 647
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 44.3 bits (103), Expect = 0.001 Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 4/169 (2%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T+ + NL E ++++F K +++ + G+AF+EF DA++A+ Sbjct: 486 SKTLVLSNLSYSATEETLQEVFEK-ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 544 Query: 302 DGYNFDGNRLRVEL-AHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQD 478 + +G +R+EL G N+ S P+ + V GL + + Sbjct: 545 NKREIEGRAIRLELQGPRGSPNARSQPSK----------------TLFVKGLSEDTTEET 588 Query: 479 LKDHMRKAGDVCFSEVY-REGGGT--IGIVDYTNYDDMKYAIRKLDDTE 616 LK+ G V V RE G + G VD+ + +D K A ++D E Sbjct: 589 LKESF--DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGE 635 Score = 38.1 bits (87), Expect = 0.074 Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 2/180 (1%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYG--RIVEIDLKVPPRPPGFAFVEFEDPRDAEDA 289 R +RT+ NLP + + E++++F R+V D K G A++EF+ DAE Sbjct: 391 RDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGK----SKGIAYIEFKTEADAEKT 446 Query: 290 IQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 + + G DG + L + G N S ++ VL + L SA+ Sbjct: 447 FEEKQGTEIDGR--SISLYYTGEKGQ----NQDYRGGKNSTWSGESKTLVL-SNLSYSAT 499 Query: 470 WQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIR 649 + L++ KA + + +++ +++D K A+ + E + R ++ Sbjct: 500 EETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQ 559 Score = 34.7 bits (78), Expect = 0.81 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T++V L D E +++ F R + + GF FV+F DA+ A + Sbjct: 572 SKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 631 Query: 302 DGYNFDGNRLRVELA 346 + DGN++ ++ A Sbjct: 632 EDGEIDGNKVTLDWA 646
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 44.3 bits (103), Expect = 0.001 Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 4/169 (2%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T+ + NL E ++++F K +++ + G+AF+EF DA++A+ Sbjct: 485 SKTLVLSNLSYSATEETLQEVFEK-ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 543 Query: 302 DGYNFDGNRLRVEL-AHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQD 478 + +G +R+EL G N+ S P+ + V GL + + Sbjct: 544 NKREIEGRAIRLELQGPRGSPNARSQPSK----------------TLFVKGLSEDTTEET 587 Query: 479 LKDHMRKAGDVCFSEVY-REGGGT--IGIVDYTNYDDMKYAIRKLDDTE 616 LK+ G V V RE G + G VD+ + +D K A ++D E Sbjct: 588 LKESF--DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGE 634 Score = 38.1 bits (87), Expect = 0.074 Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 2/180 (1%) Frame = +2 Query: 116 RWSRTIYVGNLPGDIREREVEDLFYKYG--RIVEIDLKVPPRPPGFAFVEFEDPRDAEDA 289 R +RT+ NLP + + E++++F R+V D K G A++EF+ DAE Sbjct: 390 RDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGK----SKGIAYIEFKTEADAEKT 445 Query: 290 IQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 + + G DG + L + G N S ++ VL + L SA+ Sbjct: 446 FEEKQGTEIDGR--SISLYYTGEKGQ----NQDYRGGKNSTWSGESKTLVL-SNLSYSAT 498 Query: 470 WQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIR 649 + L++ KA + + +++ +++D K A+ + E + R ++ Sbjct: 499 EETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQ 558 Score = 34.7 bits (78), Expect = 0.81 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 301 S+T++V L D E +++ F R + + GF FV+F DA+ A + Sbjct: 571 SKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 630 Query: 302 DGYNFDGNRLRVELA 346 + DGN++ ++ A Sbjct: 631 EDGEIDGNKVTLDWA 645
>Q5R9L3:G3BP2_PONPY Ras GTPase-activating protein-binding protein 2 - Pongo pygmaeus| (Orangutan) Length = 482 Score = 44.3 bits (103), Expect = 0.001 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLK---VPPRPPGFAFVEFED 268 S ++VGNLP DI E E+++ F +G +VE+ + V + P F FV F+D Sbjct: 330 SHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDD 381
>P97379:G3BP2_MOUSE Ras GTPase-activating protein-binding protein 2 - Mus musculus| (Mouse) Length = 482 Score = 44.3 bits (103), Expect = 0.001 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLK---VPPRPPGFAFVEFED 268 S ++VGNLP DI E E+++ F +G +VE+ + V + P F FV F+D Sbjct: 330 SHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDD 381
>Q9UN86:G3BP2_HUMAN Ras GTPase-activating protein-binding protein 2 - Homo sapiens| (Human) Length = 482 Score = 44.3 bits (103), Expect = 0.001 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLK---VPPRPPGFAFVEFED 268 S ++VGNLP DI E E+++ F +G +VE+ + V + P F FV F+D Sbjct: 330 SHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDD 381
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 44.3 bits (103), Expect = 0.001 Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 4/139 (2%) Frame = +2 Query: 122 SRTIYVGN-LPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDA 289 S+T + N LP ++ + E++ LF G I L K+ + G+ FV + DP+DAE A Sbjct: 37 SKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Query: 290 IQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 I +G ++V A R +S+S+ +++ + V+GLP + + Sbjct: 97 INTLNGLRLQTKTIKVSYA---RPSSASIRDAN----------------LYVSGLPKTMT 137 Query: 470 WQDLKDHMRKAGDVCFSEV 526 ++L+ + G + S + Sbjct: 138 QKELEQLFSQYGRIITSRI 156
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 44.3 bits (103), Expect = 0.001 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 3/135 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 + V LP ++ + E++ LF G I L K+ + G+ FV + DP+DAE AI Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 +G ++V A R +S+S+ +++ + V+GLP + + ++L Sbjct: 101 NGLRLQTKTIKVSYA---RPSSASIRDAN----------------LYVSGLPKTMTQKEL 141 Query: 482 KDHMRKAGDVCFSEV 526 + + G + S + Sbjct: 142 EQLFSQYGRIITSRI 156
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 44.3 bits (103), Expect = 0.001 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 3/135 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 + V LP ++ + E++ LF G I L K+ + G+ FV + DP+DAE AI Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 +G ++V A R +S+S+ +++ + V+GLP + + ++L Sbjct: 101 NGLRLQTKTIKVSYA---RPSSASIRDAN----------------LYVSGLPKTMTQKEL 141 Query: 482 KDHMRKAGDVCFSEV 526 + + G + S + Sbjct: 142 EQLFSQYGRIITSRI 156
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 44.3 bits (103), Expect = 0.001 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 3/135 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 + V LP ++ + E++ LF G I L K+ + G+ FV + DP+DAE AI Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 +G ++V A R +S+S+ +++ + V+GLP + + ++L Sbjct: 101 NGLRLQTKTIKVSYA---RPSSASIRDAN----------------LYVSGLPKTMTQKEL 141 Query: 482 KDHMRKAGDVCFSEV 526 + + G + S + Sbjct: 142 EQLFSQYGRIITSRI 156
>Q09511:RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 - Caenorhabditis| elegans Length = 196 Score = 43.9 bits (102), Expect = 0.001 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++ + NL ++ F +YG I ++ + K + GF FV F + RDAE A+ Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79 Query: 299 RDGYNFDGNRLRVELA 346 DG DG LRV LA Sbjct: 80 TDGKLVDGRELRVTLA 95
>Q5AJS6:MRD1_CANAL Multiple RNA-binding domain-containing protein 1 - Candida albicans| (Yeast) Length = 841 Score = 43.9 bits (102), Expect = 0.001 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP--------GFAFVEFEDPRDAED 286 ++V NL + + DLF V +K P P GF FVEF A Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678 Query: 287 AIQGRDGYNFDGNRLRVELAH--GGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPS 460 AI DG+ DG++L+++L+H G ++SS+ S ++++ LP Sbjct: 679 AISTLDGHVLDGHKLQLKLSHKQGTGTSASSIKKS------------GKSSKIIIKNLPF 726 Query: 461 SASWQDL 481 A+ +DL Sbjct: 727 EATRKDL 733 Score = 42.4 bits (98), Expect = 0.004 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRI--VEIDLKVPPRPPGFAFVEFEDPRDAEDAIQ 295 S I + NLP + +++ +LF +G++ V + K GFAFVEF ++AE A+ Sbjct: 716 SSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAMS 775 Query: 296 GRDGYNFDGNRLRVELAHGGRANS 367 +G + G RL ++ A N+ Sbjct: 776 QLEGVHLLGRRLVMQYAEQDPENA 799 Score = 36.2 bits (82), Expect = 0.28 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRP---PGFAFVEFEDPRDAEDAIQGR 301 +++ N+ + E + LF +YG + E+ + + R GF +V+F DA A + Sbjct: 312 LFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSL 371 Query: 302 DGYNFDGNRLRV 337 D F G L + Sbjct: 372 DKQIFQGRLLHI 383
>Q8CIN6:CELF3_MOUSE CUG-BP- and ETR-3-like factor 3 - Mus musculus (Mouse)| Length = 465 Score = 43.9 bits (102), Expect = 0.001 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 I++ +LP + + E+ +F +G ++ + + + F FV F++P A+ AIQ Sbjct: 382 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 441 Query: 302 DGYNFDGNRLRVELAHGGRAN 364 +G+ RL+V+L AN Sbjct: 442 NGFQIGMKRLKVQLKRPKDAN 462
>Q5SZQ8:CELF3_HUMAN CUG-BP- and ETR-3-like factor 3 - Homo sapiens (Human)| Length = 465 Score = 43.9 bits (102), Expect = 0.001 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 I++ +LP + + E+ +F +G ++ + + + F FV F++P A+ AIQ Sbjct: 382 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 441 Query: 302 DGYNFDGNRLRVELAHGGRAN 364 +G+ RL+V+L AN Sbjct: 442 NGFQIGMKRLKVQLKRPKDAN 462
>Q08E07:CELF3_BOVIN CUG-BP- and ETR-3-like factor 3 - Bos taurus (Bovine)| Length = 461 Score = 43.9 bits (102), Expect = 0.001 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 I++ +LP + + E+ +F +G ++ + + + F FV F++P A+ AIQ Sbjct: 378 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 437 Query: 302 DGYNFDGNRLRVELAHGGRAN 364 +G+ RL+V+L AN Sbjct: 438 NGFQIGMKRLKVQLKRPKDAN 458
>Q6PFR5:TRA2A_MOUSE Transformer-2 protein homolog - Mus musculus (Mouse)| Length = 281 Score = 43.5 bits (101), Expect = 0.002 Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%) Frame = +2 Query: 164 EREVEDLFYKYGRIVEIDLKVPPRPP---GFAFVEFEDPRDAEDAIQGRDGYNFDGNRLR 334 ER++ ++F +YG + +++ R GFAFV FE D+++A++ +G DG R+R Sbjct: 130 ERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIR 189 Query: 335 VELAHGGRANS 367 V+ + RA++ Sbjct: 190 VDYSITKRAHT 200
>Q13595:TRA2A_HUMAN Transformer-2 protein homolog - Homo sapiens (Human)| Length = 282 Score = 43.5 bits (101), Expect = 0.002 Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%) Frame = +2 Query: 164 EREVEDLFYKYGRIVEIDLKVPPRPP---GFAFVEFEDPRDAEDAIQGRDGYNFDGNRLR 334 ER++ ++F +YG + +++ R GFAFV FE D+++A++ +G DG R+R Sbjct: 132 ERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIR 191 Query: 335 VELAHGGRANS 367 V+ + RA++ Sbjct: 192 VDYSITKRAHT 202
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 43.5 bits (101), Expect = 0.002 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 7/81 (8%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 +YV NLP I + +++ +F KYG IV+ ++ K+ RP G AFV + +A++AI Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274 Query: 302 DGYNFDGNR--LRVELA--HG 352 + +G L V LA HG Sbjct: 275 NNVIPEGGSQPLSVRLAQEHG 295 Score = 34.7 bits (78), Expect = 0.81 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = +2 Query: 113 RRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP---GFAFVEFEDPRDAE 283 R + + V LP D+ +RE+ LF G I + + G+AFV+F D++ Sbjct: 123 RSSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQ 182 Query: 284 DAIQGRDGYNFDGNRLRVELAHGG 355 AI+ +G RL+V A G Sbjct: 183 RAIKVLNGITVRNKRLKVSYARPG 206
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 43.5 bits (101), Expect = 0.002 Identities = 37/175 (21%), Positives = 79/175 (45%), Gaps = 11/175 (6%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 +R +YVGN+P ++ E+ + ++G I ++ K R F FV + DA I Sbjct: 83 ARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVI 142 Query: 293 QGRDGYNFDGNRLRVELA----HGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPS 460 + + G +++V + G ++ +S + Y+V + L Sbjct: 143 EKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFV---------ESPYKVYIGNLAK 193 Query: 461 SASWQDLKDHMRKAGDVCFSEVYREGGGT----IGIVDYTNYDDMKYAIRKLDDT 613 + + + LKD + G V ++V R G + G V +++ ++++ AI+ L+++ Sbjct: 194 TVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNS 248 Score = 41.2 bits (95), Expect = 0.009 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP---RPPGFAFVEFEDPRDAEDAIQGR 301 +Y+GNL + ++D F + G+++ ++ P + GF FV F + E AIQ Sbjct: 186 VYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQAL 245 Query: 302 DGYNFDGNRLRVELA 346 + +G ++RV A Sbjct: 246 NNSVLEGQKIRVNKA 260
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 43.5 bits (101), Expect = 0.002 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+LP D+ E + D F G ++ I + + R G+A+V F+ P DAE A+ Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL-- 60 Query: 299 RDGYNFD 319 D NFD Sbjct: 61 -DTMNFD 66 Score = 38.1 bits (87), Expect = 0.074 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL--KVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 +YV N D + ++++ F YG+I + K + GF FV FE AE A+Q + Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALN 244 Query: 305 GYNF-DGNRLRVELA 346 G + +G L V A Sbjct: 245 GKDMGEGKSLYVARA 259
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 43.5 bits (101), Expect = 0.002 Identities = 32/163 (19%), Positives = 70/163 (42%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +Y+ N D+ + +++ F +YG + + + + GF FV FE DA+ A+ + Sbjct: 193 VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMN 252 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G + +G + V A + L ++R+ + V L + L+ Sbjct: 253 GKDLNGKAIFVGRAQKKVERQTELKRK-FEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 485 DHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLD 607 G + ++V EGG + G V +++ ++ A+ +++ Sbjct: 312 KEFTPFGSITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354 Score = 38.9 bits (89), Expect = 0.043 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+L D+ E + + F G I+ I + + R G+A+V F+ P DAE A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL-- 69 Query: 299 RDGYNFD 319 D NFD Sbjct: 70 -DTMNFD 75
>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)| Length = 157 Score = 43.5 bits (101), Expect = 0.002 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%) Frame = +2 Query: 134 YVGNLPGDIREREVEDLFYKYGRIVE---IDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 +VG L + +E F ++G I + I+ + R GF FV F+D + DAI+G + Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMN 68 Query: 305 GYNFDGNRLRVELA 346 G DG + V A Sbjct: 69 GQELDGRNITVNEA 82
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 43.5 bits (101), Expect = 0.002 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 7/182 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 + V LP ++ + E LF G I L K+ + G+ FV + DP+DAE AI Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 +G ++V A R +S+S+ +++ + V+GLP + + ++L Sbjct: 101 NGLRLQTKTIKVSYA---RPSSASIRDAN----------------LYVSGLPKTMTQKEL 141 Query: 482 KDHMRKAGDVCFSEVYREG----GGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIR 649 + + G + S + + +G + + + + AI+ L+ K + + PI Sbjct: 142 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ--KPSGATEPIT 199 Query: 650 VK 655 VK Sbjct: 200 VK 201
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 43.5 bits (101), Expect = 0.002 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 7/182 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 + V LP ++ + E LF G I L K+ + G+ FV + DP+DAE AI Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 +G ++V A R +S+S+ +++ + V+GLP + + ++L Sbjct: 113 NGLRLQTKTIKVSYA---RPSSASIRDAN----------------LYVSGLPKTMTQKEL 153 Query: 482 KDHMRKAGDVCFSEVYREG----GGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIR 649 + + G + S + + +G + + + + AI+ L+ K + + PI Sbjct: 154 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ--KPSGATEPIT 211 Query: 650 VK 655 VK Sbjct: 212 VK 213
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 43.5 bits (101), Expect = 0.002 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 7/182 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 + V LP ++ + E LF G I L K+ + G+ FV + DP+DAE AI Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107 Query: 302 DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDL 481 +G ++V A R +S+S+ +++ + V+GLP + + ++L Sbjct: 108 NGLRLQTKTIKVSYA---RPSSASIRDAN----------------LYVSGLPKTMTQKEL 148 Query: 482 KDHMRKAGDVCFSEVYREG----GGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIR 649 + + G + S + + +G + + + + AI+ L+ K + + PI Sbjct: 149 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ--KPSGATEPIT 206 Query: 650 VK 655 VK Sbjct: 207 VK 208
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 43.5 bits (101), Expect = 0.002 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +2 Query: 95 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFE 265 K+ R S I+VG +P + E E+++ F ++G + E+ + RP GF F+ FE Sbjct: 104 KEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFE 163 Query: 266 DPRDAEDAI 292 D + + A+ Sbjct: 164 DEQSVDQAV 172 Score = 35.4 bits (80), Expect = 0.48 Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 7/134 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VG L + + F +YG +V+ + K + GF FV+F+DP + R Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71 Query: 302 ----DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 DG N D G S P + + ++ V G+P + Sbjct: 72 PHTLDGRNIDPK----PCTPRGMQPERSRPREGWQQKEPRTENSRSN-KIFVGGIPHNCG 126 Query: 470 WQDLKDHMRKAGDV 511 +LK++ + G V Sbjct: 127 ETELKEYFNRFGVV 140
>Q7ZWM3:CEL3B_XENLA CUG-BP- and ETR-3-like factor 3-B - Xenopus laevis (African clawed| frog) Length = 462 Score = 43.5 bits (101), Expect = 0.002 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 I++ +LP + + E+ +F +G ++ + + + F FV F++P A+ AIQ Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSM 438 Query: 302 DGYNFDGNRLRVELAHGGRAN 364 +G+ RL+V+L AN Sbjct: 439 NGFQIGMKRLKVQLKRPKDAN 459
>Q91579:CEL3A_XENLA CUG-BP- and ETR-3-like factor 3-A - Xenopus laevis (African clawed| frog) Length = 462 Score = 43.5 bits (101), Expect = 0.002 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 I++ +LP + + E+ +F +G ++ + + + F FV F++P A+ AIQ Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAM 438 Query: 302 DGYNFDGNRLRVELAHGGRAN 364 +G+ RL+V+L AN Sbjct: 439 NGFQIGMKRLKVQLKRPKDAN 459
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 43.1 bits (100), Expect = 0.002 Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 3/57 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 +YV NLP I + +++ +F KYG IV+ ++ K+ +P G AFV F +A++AI Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAI 254 Score = 34.7 bits (78), Expect = 0.81 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPP---GFAFVEFEDPRDAEDAIQGR 301 + V LP D+ +RE+ LF G I + + G+AFV+F D++ AI+ Sbjct: 112 LIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSL 171 Query: 302 DGYNFDGNRLRVELAHGG 355 +G RL+V A G Sbjct: 172 NGITVRNKRLKVSYARPG 189
>P32385:RNP1_YEAST Ribonucleoprotein 1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 249 Score = 43.1 bits (100), Expect = 0.002 Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 4/76 (5%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFY-KYGRI-VEIDLKVPPRPP--GFAFVEFEDPRDAEDAI 292 RT+YVGNLP + R++++ DLF YG+I + + K P + P FAF+EF++ + + Sbjct: 35 RTLYVGNLPKNCRKQDLRDLFEPNYGKITINMLKKKPLKKPLKRFAFIEFQEGVNLKKVK 94 Query: 293 QGRDGYNFDGNRLRVE 340 + +G F ++ +E Sbjct: 95 EKMNGKIFMNEKIVIE 110
>O43251:RBM9_HUMAN RNA-binding protein 9 - Homo sapiens (Human)| Length = 390 Score = 43.1 bits (100), Expect = 0.002 Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 1/80 (1%) Frame = +2 Query: 110 SRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR-PPGFAFVEFEDPRDAED 286 S+ + ++V N+P R+ ++ +F ++G+I+++++ R GF FV FE+ DA+ Sbjct: 116 SKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADR 175 Query: 287 AIQGRDGYNFDGNRLRVELA 346 A + G +G ++ V A Sbjct: 176 AREKLHGTVVEGRKIEVNNA 195
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 43.1 bits (100), Expect = 0.002 Identities = 30/163 (18%), Positives = 71/163 (43%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP--RPPGFAFVEFEDPRDAEDAIQGRD 304 +Y+ N ++ + +++LF ++G+ + + + P + GF FV +E DA A++ + Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G G + V A + L +SR+ + + L + + L+ Sbjct: 253 GKEISGKIIFVGRAQKKVERQAELKRK-FEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311 Query: 485 DHMRKAGDVCFSEVYREGGGT--IGIVDYTNYDDMKYAIRKLD 607 G + ++V E G + G V +++ ++ A+ +++ Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354 Score = 39.3 bits (90), Expect = 0.033 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQG 298 ++YVG+L D+ E + + F G ++ I + + R G+A+V F+ P DAE A+ Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL-- 69 Query: 299 RDGYNFD 319 D NFD Sbjct: 70 -DTMNFD 75
>Q4R627:LARP7_MACFA La-related protein 7 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 581 Score = 43.1 bits (100), Expect = 0.002 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 RT+YV LP ++ +E +F K G +V I + K P GFAFVEFE A AI+ Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
>Q4G0J3:LARP7_HUMAN La-related protein 7 - Homo sapiens (Human)| Length = 582 Score = 43.1 bits (100), Expect = 0.002 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 RT+YV LP ++ +E +F K G +V I + K P GFAFVEFE A AI+ Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 43.1 bits (100), Expect = 0.002 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR---PPGFAFVEFEDPRDAEDAIQGR 301 +Y+ LP + +++VED+F ++GRI+ + V G AF+ F+ +AE+AI Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167 Query: 302 DGYNFDGNRLRVELAHGGRANSS 370 +G+ G+ + + N + Sbjct: 168 NGHKPPGSSEPITVKFAANPNQN 190
>Q9IBD1:CELF3_DANRE CUG-BP- and ETR-3-like factor 3 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 452 Score = 43.1 bits (100), Expect = 0.002 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 I++ +LP + + E+ +F +G ++ + + + F FV F++P A+ AIQ Sbjct: 369 IFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 428 Query: 302 DGYNFDGNRLRVELAHGGRAN 364 +G+ RL+V+L AN Sbjct: 429 NGFQIGMKRLKVQLKRPKDAN 449
>Q9JJ43:A2BP1_MOUSE Ataxin-2-binding protein 1 - Mus musculus (Mouse)| Length = 396 Score = 43.1 bits (100), Expect = 0.002 Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 1/80 (1%) Frame = +2 Query: 110 SRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR-PPGFAFVEFEDPRDAED 286 S+ + ++V N+P R+ ++ +F ++G+I+++++ R GF FV FE+ DA+ Sbjct: 111 SKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADR 170 Query: 287 AIQGRDGYNFDGNRLRVELA 346 A + G +G ++ V A Sbjct: 171 AREKLHGTVVEGRKIEVNNA 190
>P17133:RU17_DROME U1 small nuclear ribonucleoprotein 70 kDa - Drosophila melanogaster| (Fruit fly) Length = 448 Score = 42.7 bits (99), Expect = 0.003 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 RT+++ + D E ++ F YG I +I L + +P G+AF+E+E RD A + Sbjct: 102 RTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYK 161 Query: 296 GRDGYNFDGNRLRVEL 343 DG D R+ V++ Sbjct: 162 HADGKKIDSKRVLVDV 177
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 42.7 bits (99), Expect = 0.003 Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYG--RIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 ++V N+ DI + ++++LF +YG V++ + GF FV +E A+ A+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G + DG L V A + L SR + + L + + + LK Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAEL-RRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 485 DHMRKAGDVCFSEVYRE--GGGTIGIVDYTNYDDMKYAIRKLD 607 + G + ++V E G G+V ++++++ A+ +++ Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMN 362
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 42.7 bits (99), Expect = 0.003 Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYG--RIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 ++V N+ DI + ++++LF +YG V++ + GF FV +E A+ A+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G + DG L V A + L SR + + L + + + LK Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAEL-RRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 485 DHMRKAGDVCFSEVYRE--GGGTIGIVDYTNYDDMKYAIRKLD 607 + G + ++V E G G+V ++++++ A+ +++ Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMN 362
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 42.7 bits (99), Expect = 0.003 Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYG--RIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 ++V N+ DI + ++++LF +YG V++ + GF FV +E A+ A+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G + DG L V A + L SR + + L + + + LK Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAEL-RRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 485 DHMRKAGDVCFSEVYRE--GGGTIGIVDYTNYDDMKYAIRKLD 607 + G + ++V E G G+V ++++++ A+ +++ Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMN 362
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 42.7 bits (99), Expect = 0.003 Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYG--RIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 ++V N+ DI + ++++LF +YG V++ + GF FV +E A+ A+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G + DG L V A + L SR + + L + + + LK Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAEL-RRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 485 DHMRKAGDVCFSEVYRE--GGGTIGIVDYTNYDDMKYAIRKLD 607 + G + ++V E G G+V ++++++ A+ +++ Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMN 362
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 42.7 bits (99), Expect = 0.003 Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYG--RIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 ++V N+ DI + ++++LF +YG V++ + GF FV +E A+ A+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G + DG L V A + L SR + + L + + + LK Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAEL-RRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 485 DHMRKAGDVCFSEVYRE--GGGTIGIVDYTNYDDMKYAIRKLD 607 + G + ++V E G G+V ++++++ A+ +++ Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMN 362
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 42.7 bits (99), Expect = 0.003 Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 4/163 (2%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYG--RIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRD 304 ++V N+ DI + ++++LF +YG V++ + GF FV +E A+ A+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260 Query: 305 GYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSASWQDLK 484 G + DG L V A + L SR + + L + + + LK Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAEL-RRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 485 DHMRKAGDVCFSEVYRE--GGGTIGIVDYTNYDDMKYAIRKLD 607 + G + ++V E G G+V ++++++ A+ +++ Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMN 362
>Q04047:NONA_DROME Protein no-on-transient A - Drosophila melanogaster (Fruit fly)| Length = 700 Score = 42.7 bits (99), Expect = 0.003 Identities = 26/72 (36%), Positives = 38/72 (52%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVGNL DI + E+ ++F YG I EI + F F++ + +AE A + DG Sbjct: 304 LYVGNLTNDITDDELREMFKPYGEISEIFSNL---DKNFTFLKVDYHPNAEKAKRALDGS 360 Query: 311 NFDGNRLRVELA 346 G +LRV A Sbjct: 361 MRKGRQLRVRFA 372
>Q9GRX4:NONA_DROLR Protein no-on-transient A - Drosophila littoralis (Fruit fly)| Length = 698 Score = 42.7 bits (99), Expect = 0.003 Identities = 26/72 (36%), Positives = 38/72 (52%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 310 +YVGNL DI + E+ ++F YG I EI + F F++ + +AE A + DG Sbjct: 283 LYVGNLTNDITDEELREMFKPYGEIGEIFSNL---EKNFTFLKVDYHINAEKAKRALDGS 339 Query: 311 NFDGNRLRVELA 346 G +LRV A Sbjct: 340 MRKGRQLRVRFA 351
>P32831:NGR1_YEAST Negative growth regulatory protein NGR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 672 Score = 42.7 bits (99), Expect = 0.003 Identities = 28/86 (32%), Positives = 46/86 (53%) Frame = +2 Query: 128 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDG 307 T++VG L E ++ LF +G I+ + + P FV+FE DAE +IQG G Sbjct: 361 TVFVGGLVPKTTEFQLRSLFKPFGPILNVRI---PNGKNCGFVKFEKRIDAEASIQGLQG 417 Query: 308 YNFDGNRLRVELAHGGRANSSSLPNS 385 + G+ +R L+ G ++S++ NS Sbjct: 418 FIVGGSPIR--LSWGRPSSSNAKTNS 441
>Q9CQ49:NCBP2_MOUSE Nuclear cap-binding protein subunit 2 - Mus musculus (Mouse)| Length = 156 Score = 42.7 bits (99), Expect = 0.003 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S T+YVGNL E ++ +LF K G I +I + K+ GF FVE+ DAE+A+ Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAM 98 Query: 293 QGRDGYNFDGNRLRVE 340 + +G D +R + Sbjct: 99 RYINGTRLDDRIIRTD 114
>P52298:NCBP2_HUMAN Nuclear cap-binding protein subunit 2 - Homo sapiens (Human)| Length = 156 Score = 42.7 bits (99), Expect = 0.003 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S T+YVGNL E ++ +LF K G I +I + K+ GF FVE+ DAE+A+ Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAM 98 Query: 293 QGRDGYNFDGNRLRVE 340 + +G D +R + Sbjct: 99 RYINGTRLDDRIIRTD 114
>Q3ZBJ1:NCBP2_BOVIN Nuclear cap-binding protein subunit 2 - Bos taurus (Bovine)| Length = 156 Score = 42.7 bits (99), Expect = 0.003 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Frame = +2 Query: 122 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAI 292 S T+YVGNL E ++ +LF K G I +I + K+ GF FVE+ DAE+A+ Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAM 98 Query: 293 QGRDGYNFDGNRLRVE 340 + +G D +R + Sbjct: 99 RYINGTRLDDRIIRTD 114
>Q5XI01:LARP7_RAT La-related protein 7 - Rattus norvegicus (Rat)| Length = 571 Score = 42.7 bits (99), Expect = 0.003 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 RT+YV LP ++ +E +F K G +V I + K P GFAFVEFE A AI+ Sbjct: 120 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 179
>Q05CL8:LARP7_MOUSE La-related protein 7 - Mus musculus (Mouse)| Length = 570 Score = 42.7 bits (99), Expect = 0.003 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 RT+YV LP ++ +E +F K G +V I + K P GFAFVEFE A AI+ Sbjct: 119 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 178
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 42.7 bits (99), Expect = 0.003 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Frame = +2 Query: 95 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFE 265 K R S I+VG +P + E E+ + F K+G + E+ + RP GF F+ FE Sbjct: 103 KGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFE 162 Query: 266 DPRDAEDAI 292 D + + A+ Sbjct: 163 DEQSVDQAV 171 Score = 35.8 bits (81), Expect = 0.36 Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 7/134 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQGR 301 ++VG L + + F +YG +V+ + K + GF FV+F+DP + R Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71 Query: 302 ----DGYNFDGNRLRVELAHGGRANSSSLPNSHXXXXXXXXVSRHTEYRVLVTGLPSSAS 469 DG N D G + P S+ ++ V G+P + Sbjct: 72 PHTLDGRNIDPK----PCTPRGMQPERTRPKEGWQKGPRSDNSKSN--KIFVGGIPHNCG 125 Query: 470 WQDLKDHMRKAGDV 511 +L+++ +K G V Sbjct: 126 ETELREYFKKFGVV 139
>Q08473:SQD_DROME RNA-binding protein squid - Drosophila melanogaster (Fruit fly)| Length = 344 Score = 42.4 bits (98), Expect = 0.004 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Frame = +2 Query: 125 RTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPP---RPPGFAFVEFEDPRDAEDAIQ 295 R ++VG L + E+E+ D F KYG I I++K P R GFAF+ F + +A D + Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTN-TEAIDKVS 114 Query: 296 GRDGYNFDGNRL---RVELAHG 352 D + + ++ + + HG Sbjct: 115 AADEHIINSKKVDPKKAKARHG 136 Score = 36.2 bits (82), Expect = 0.28 Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Frame = +2 Query: 131 IYVGNLPGDIREREVEDLFYKYGRIVEIDL---KVPPRPPGFAFVEFEDPRDAEDAIQ 295 I+VG L +I + E++ F ++G IVE+++ K + GF F+ F+ + D ++ Sbjct: 138 IFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLK 195 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 182,962,869 Number of extensions: 3913267 Number of successful extensions: 12521 Number of sequences better than 10.0: 525 Number of HSP's gapped: 12133 Number of HSP's successfully gapped: 666 Length of query: 402 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 287 Effective length of database: 69,142,514 Effective search space: 19843901518 Effective search space used: 19843901518 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
