ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf22e10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ019639.1| Triticum aestivum alternative splicing regulator (SRp30a) mRNA, complete cds Length = 1189 Score = 1608 bits (811), Expect = 0.0 Identities = 1072/1155 (92%), Gaps = 26/1155 (2%) Strand = Plus / Plus Query: 7 ccctatcttctcctgttccccttcgtcccccggccggcgacgacgccgcgcgcgccgcga 66 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 8 ccctatcttctcctgttccccttcgtcccc-ggccggcgacgacgccgcgcgcgcagcga 66 Query: 67 acccgcccccctcctccgaggttgctgtaagcaaggaaggatgagtaggcgctggagccg 126 |||| |||| ||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 67 acccagcccc-tcctccg--gttgcagtaagcaaggaaggatgagtaggcgctggagccg 123 Query: 127 gaccatttacgttgggaacctcccaggggatatcagggagcgggaggtggaggatctgtt 186 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 gaccatttacgttgggaacctcccaggggatatcagggagcgggaggtggaggatctctt 183 Query: 187 ctacaagtatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctt 246 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 184 ctacaagtatggacggatagttgaaattgacttgaaggtccccccaaggcctcctggctt 243 Query: 247 tgcttttgttgagtttgaagatccccgtgatgccgaggatgcgattcagggccgagatgg 306 ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 244 tgcttttgttgagtttgaagatccccgtgatgctgaagatgcgattcatggccgagatgg 303 Query: 307 ctacaactttgatgggaatcgcctgagggttgaacttgcacatggtgggagggctaactc 366 ||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||||| Sbjct: 304 ctacaactttgatgggaatcggcttagggttgaacttgcacatggcgggagggccaactc 363 Query: 367 ttcatcccttcctaacagccatggtggtggaggacgccgtggtggtgtctctaggcatac 426 |||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 364 ttcatcccttccgaacagctatggtggtgggggacgccgtggtggtgtctctaggcatac 423 Query: 427 agagtatcgtgttctggttactggactaccttcttctgcatcatggcaagatctaaagga 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 ggagtatcgtgttctggttactggactaccttcttctgcatcatggcaagatctaaagga 483 Query: 487 tcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtggtggtac 546 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 484 ccatatgagaaaggctggtgatgtttgtttctctgaggtgtaccgtgagggtggtggtac 543 Query: 547 tattggaattgttgattatacaaactatgatgatatgaagtatgctataaggaagcttga 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 tattggaattgttgattatacaaactatgatgatatgaagtatgctataaggaagcttga 603 Query: 607 tgatactgaatttaaaaatgccttctctcgagcgcctataagggtgaaggagtatgctgg 666 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 tgatactgaatttaaaaatgccttctctcgagcgcctataagggtgaaggagtatgctgg 663 Query: 667 caaaagcagccgctcctattctcgcagccgtagcagaagccgaagtggcagctacagcag 726 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 664 aaaaagcagccgctcctattcacgcagccgtagcagaagccgaagtggcagctacagcag 723 Query: 727 gagtccgagcaagtctccaaagnnnnnnncatcacgccgttcagcgtcaagatctcggtc 786 |||||| || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 724 gagtccaag------tccaaagaaaaaaccatcacgccgttcagcgtcaagatctcggtc 777 Query: 787 aagatctgtttcttcccattcaaggtcaccgtcgaagggacgctctccatcaagatcacc 846 ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 778 gagatcagtttcttcccattcaaggtcaccgtcaaaggaacgctctccatcaagatcacc 837 Query: 847 agcaaaatcccgatcacctgttgctgcatctcccgttgtcaatggtgaagcagcaagccc 906 ||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 838 agctaaatcccgatcccctgtcgctgcatctcccgtcgtcaatggtgaagcagcaagccc 897 Query: 907 caagagggacccaagcaggagcccatcgcgttcccgctctcctgatgccaaatccgagta 966 ||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 898 caagagggacccaagcaagagcccatcacgttcccggtctcctgatgccaaatcagagta 957 Query: 967 aaactgatgtgtggttaggggtggtgagaggcggaggcatgttcttcaaattcttcatat 1026 ||||||||| | ||||||||| |||||||||||||| |||| |||||||||||||||||| Sbjct: 958 aaactgatgcgaggttaggggcggtgagaggcggagccatggtcttcaaattcttcatat 1017 Query: 1027 ttt-tcttcgccaacatctgcatccgctgttctagtaatactatccatatgttcggttat 1085 ||| |||||||| || ||||||||||||||| ||| ||||||| | |||||||| Sbjct: 1018 tttgtcttcgccgacttctgcatccgctgttatag---tactatctctgtgttcggt--- 1071 Query: 1086 tatattctaggttcctttgtgacatttcctgt-aaaacttatttggatggattattgaga 1144 ||||||||||||||||| || |||| ||||||| |||||||||||| |||||| Sbjct: 1072 --tattctaggttcctttg------tttctgtaaaaacttgtttggatggattcttgaga 1123 Query: 1145 tttatgtactttctt 1159 |||||||||| |||| Sbjct: 1124 tttatgtactctctt 1138
>ref|NM_001067143.1| Oryza sativa (japonica cultivar-group) Os07g0673500 (Os07g0673500) mRNA, complete cds Length = 1352 Score = 620 bits (313), Expect = e-174 Identities = 646/759 (85%), Gaps = 9/759 (1%) Strand = Plus / Plus Query: 99 aaggaaggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggata 158 |||||||||||||||||||||||||| |||| ||||| || ||||||||||| || || | Sbjct: 137 aaggaaggatgagtaggcgctggagcaggacaatttatgtcgggaacctcccgggcgaca 196 Query: 159 tcagggagcgggaggtggaggatctgttctacaagtatggacggatagtggaaattgact 218 |||||||| ||||||| |||||||||||||||||||||||||| || || || ||||||| Sbjct: 197 tcagggagagggaggtagaggatctgttctacaagtatggacgcattgttgatattgact 256 Query: 219 tgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatg 278 ||||| ||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 257 tgaagatccccccaaggccgcctggttttgcttttgttgagttcgaagatccccgtgatg 316 Query: 279 ccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcctgagggttg 338 | || ||||| || | || || |||||||| || ||||||||||| || ||||||| | Sbjct: 317 ctgaagatgcaatccgtggacgggatggctataattttgatgggaaccgtttgagggtgg 376 Query: 339 aacttgcacatggtgggagggctaactcttcatcccttcctaacagccatggtggtggag 398 ||||||||||||||||||| | ||||||||| ||| || |||| |||||| || | Sbjct: 377 aacttgcacatggtgggagaggtaactcttcctccttt---aacaattctggtggagggg 433 Query: 399 gacgccgtggtggtgtctctaggcatacagagtatcgtgttctggttactggactacctt 458 |||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 434 gacgtcgtgggggtgtatctaggcatacagagtatcgcgttctggttactggactacctt 493 Query: 459 cttctgcatcatggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtttct 518 |||| |||||||||||||| |||||||| |||||| |||| |||||||||||||||| || Sbjct: 494 cttcagcatcatggcaagacctaaaggaccatatgcgaaatgctggtgatgtttgttact 553 Query: 519 ctgaggtgtatcgtgagggtggtggtactattggaattgttgattatacaaactatgatg 578 |||| ||||| |||||||||||||||||||| |||||||| || || ||||||||||||| Sbjct: 554 ctgaagtgtaccgtgagggtggtggtactataggaattgtagactacacaaactatgatg 613 Query: 579 atatgaagtatgctataaggaagcttgatgatactgaatttaaaaatgccttctctcgag 638 | |||||||||||||| ||||| ||||||||| |||||||||| ||||||||||| | Sbjct: 614 acatgaagtatgctatcaggaaacttgatgattctgaatttaagaatgccttctcaaagg 673 Query: 639 cgcctataagggtgaaggagtatgctggcaaaagcagccgctcctattctcgcagccgta 698 | |||||||||||||||||||| ||| || ||||||| || || || || ||||| | Sbjct: 674 cctatataagggtgaaggagtatgatggaaagcgcagccgttcatactcacgaagccgaa 733 Query: 699 gcagaagccgaagtggcagctac------agcaggagtccgagcaagtctccaaagnnnn 752 || |||| ||| || |||||||| ||||||||||| ||||||||||| ||| Sbjct: 734 gccgaagtcgaggtcgcagctacagcagaagcaggagtccaagcaagtctcccaagggaa 793 Query: 753 nnncatcacgccgttcagcgtcaagatctcggtcaagatctgtttcttcccattcaaggt 812 |||||||||||||||| || |||||||| || ||||| | |||||||| |||||| | Sbjct: 794 agtcatcacgccgttcagcatctagatctcgatcgagatcagcttcttcccgttcaagat 853 Query: 813 caccgtcgaagggacgctctccatcaagatcaccagcaa 851 || ||| ||||| ||||||||||||||||||||||||| Sbjct: 854 cagagtcaaaggggcgctctccatcaagatcaccagcaa 892 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 916 cccaagcaggagcccatcgcgttcccgctctcctgatgccaaatccga 963 |||||||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 984 cccaagcaggagcccatcacgttcccgatctcctgatgccaagtccga 1031 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 886 caatggtgaagcagcaagccccaaga 911 ||||||||| |||||||||||||||| Sbjct: 921 caatggtgatgcagcaagccccaaga 946
>dbj|AK106176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C08, full insert sequence Length = 1352 Score = 620 bits (313), Expect = e-174 Identities = 646/759 (85%), Gaps = 9/759 (1%) Strand = Plus / Plus Query: 99 aaggaaggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggata 158 |||||||||||||||||||||||||| |||| ||||| || ||||||||||| || || | Sbjct: 137 aaggaaggatgagtaggcgctggagcaggacaatttatgtcgggaacctcccgggcgaca 196 Query: 159 tcagggagcgggaggtggaggatctgttctacaagtatggacggatagtggaaattgact 218 |||||||| ||||||| |||||||||||||||||||||||||| || || || ||||||| Sbjct: 197 tcagggagagggaggtagaggatctgttctacaagtatggacgcattgttgatattgact 256 Query: 219 tgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatg 278 ||||| ||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 257 tgaagatccccccaaggccgcctggttttgcttttgttgagttcgaagatccccgtgatg 316 Query: 279 ccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcctgagggttg 338 | || ||||| || | || || |||||||| || ||||||||||| || ||||||| | Sbjct: 317 ctgaagatgcaatccgtggacgggatggctataattttgatgggaaccgtttgagggtgg 376 Query: 339 aacttgcacatggtgggagggctaactcttcatcccttcctaacagccatggtggtggag 398 ||||||||||||||||||| | ||||||||| ||| || |||| |||||| || | Sbjct: 377 aacttgcacatggtgggagaggtaactcttcctccttt---aacaattctggtggagggg 433 Query: 399 gacgccgtggtggtgtctctaggcatacagagtatcgtgttctggttactggactacctt 458 |||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 434 gacgtcgtgggggtgtatctaggcatacagagtatcgcgttctggttactggactacctt 493 Query: 459 cttctgcatcatggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtttct 518 |||| |||||||||||||| |||||||| |||||| |||| |||||||||||||||| || Sbjct: 494 cttcagcatcatggcaagacctaaaggaccatatgcgaaatgctggtgatgtttgttact 553 Query: 519 ctgaggtgtatcgtgagggtggtggtactattggaattgttgattatacaaactatgatg 578 |||| ||||| |||||||||||||||||||| |||||||| || || ||||||||||||| Sbjct: 554 ctgaagtgtaccgtgagggtggtggtactataggaattgtagactacacaaactatgatg 613 Query: 579 atatgaagtatgctataaggaagcttgatgatactgaatttaaaaatgccttctctcgag 638 | |||||||||||||| ||||| ||||||||| |||||||||| ||||||||||| | Sbjct: 614 acatgaagtatgctatcaggaaacttgatgattctgaatttaagaatgccttctcaaagg 673 Query: 639 cgcctataagggtgaaggagtatgctggcaaaagcagccgctcctattctcgcagccgta 698 | |||||||||||||||||||| ||| || ||||||| || || || || ||||| | Sbjct: 674 cctatataagggtgaaggagtatgatggaaagcgcagccgttcatactcacgaagccgaa 733 Query: 699 gcagaagccgaagtggcagctac------agcaggagtccgagcaagtctccaaagnnnn 752 || |||| ||| || |||||||| ||||||||||| ||||||||||| ||| Sbjct: 734 gccgaagtcgaggtcgcagctacagcagaagcaggagtccaagcaagtctcccaagggaa 793 Query: 753 nnncatcacgccgttcagcgtcaagatctcggtcaagatctgtttcttcccattcaaggt 812 |||||||||||||||| || |||||||| || ||||| | |||||||| |||||| | Sbjct: 794 agtcatcacgccgttcagcatctagatctcgatcgagatcagcttcttcccgttcaagat 853 Query: 813 caccgtcgaagggacgctctccatcaagatcaccagcaa 851 || ||| ||||| ||||||||||||||||||||||||| Sbjct: 854 cagagtcaaaggggcgctctccatcaagatcaccagcaa 892 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 916 cccaagcaggagcccatcgcgttcccgctctcctgatgccaaatccga 963 |||||||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 984 cccaagcaggagcccatcacgttcccgatctcctgatgccaagtccga 1031 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 886 caatggtgaagcagcaagccccaaga 911 ||||||||| |||||||||||||||| Sbjct: 921 caatggtgatgcagcaagccccaaga 946
>dbj|AK072839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141I23, full insert sequence Length = 1899 Score = 611 bits (308), Expect = e-171 Identities = 638/750 (85%), Gaps = 9/750 (1%) Strand = Plus / Plus Query: 99 aaggaaggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggata 158 |||||||||||||||||||||||||| |||| ||||| || ||||||||||| || || | Sbjct: 205 aaggaaggatgagtaggcgctggagcaggacaatttatgtcgggaacctcccgggcgaca 264 Query: 159 tcagggagcgggaggtggaggatctgttctacaagtatggacggatagtggaaattgact 218 |||||||| ||||||| |||||||||||||||||||||||||| || || || ||||||| Sbjct: 265 tcagggagagggaggtagaggatctgttctacaagtatggacgcattgttgatattgact 324 Query: 219 tgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatg 278 ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 325 tgaaggtccccccaaggccgcctggttttgcttttgttgagttcgaagatccccgtgatg 384 Query: 279 ccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcctgagggttg 338 | || ||||| || | || || |||||||| || ||||||||||| || ||||||| | Sbjct: 385 ctgaagatgcaatccgtggacgggatggctataattttgatgggaaccgtttgagggtgg 444 Query: 339 aacttgcacatggtgggagggctaactcttcatcccttcctaacagccatggtggtggag 398 ||||||||||||||||||| | ||||||||| ||| || |||| |||||| || | Sbjct: 445 aacttgcacatggtgggagaggtaactcttcctccttt---aacaattctggtggagggg 501 Query: 399 gacgccgtggtggtgtctctaggcatacagagtatcgtgttctggttactggactacctt 458 |||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 502 gacgtcgtgggggtgtatctaggcatacagagtatcgcgttctggttactggactacctt 561 Query: 459 cttctgcatcatggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtttct 518 |||| |||||||||||||| |||||||| |||||| |||| |||||||||||||||| || Sbjct: 562 cttcagcatcatggcaagacctaaaggaccatatgcgaaatgctggtgatgtttgttact 621 Query: 519 ctgaggtgtatcgtgagggtggtggtactattggaattgttgattatacaaactatgatg 578 |||| ||||| |||||||||||||||||||| |||||||| || || ||||||||||||| Sbjct: 622 ctgaagtgtaccgtgagggtggtggtactataggaattgtagactacacaaactatgatg 681 Query: 579 atatgaagtatgctataaggaagcttgatgatactgaatttaaaaatgccttctctcgag 638 | |||||||||||||| ||||| ||||||||| |||||||||| ||||||||||| | Sbjct: 682 acatgaagtatgctatcaggaaacttgatgattctgaatttaagaatgccttctcaaagg 741 Query: 639 cgcctataagggtgaaggagtatgctggcaaaagcagccgctcctattctcgcagccgta 698 | |||||||||||||||||||| ||| || ||||||| || || || || ||||| | Sbjct: 742 cctatataagggtgaaggagtatgatggaaagcgcagccgttcatactcacgaagccgaa 801 Query: 699 gcagaagccgaagtggcagctac------agcaggagtccgagcaagtctccaaagnnnn 752 || |||| ||| || |||||||| ||||||||||| ||||||||||| ||| Sbjct: 802 gccgaagtcgaggtcgcagctacagcagaagcaggagtccaagcaagtctcccaagggaa 861 Query: 753 nnncatcacgccgttcagcgtcaagatctcggtcaagatctgtttcttcccattcaaggt 812 |||||||||||||||| || |||||||| || ||||| | |||||||| |||||| | Sbjct: 862 agtcatcacgccgttcagcatctagatctcgatcgagatcagcttcttcccgttcaagat 921 Query: 813 caccgtcgaagggacgctctccatcaagat 842 || ||| ||||| |||||||||||||||| Sbjct: 922 cagagtcaaaggggcgctctccatcaagat 951 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 916 cccaagcaggagcccatcgcgttcccgctctcctgatgccaaatccga 963 |||||||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 1518 cccaagcaggagcccatcacgttcccgatctcctgatgccaagtccga 1565 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 886 caatggtgaagcagcaagccccaaga 911 ||||||||| |||||||||||||||| Sbjct: 1455 caatggtgatgcagcaagccccaaga 1480
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 456 bits (230), Expect = e-125 Identities = 230/230 (100%) Strand = Plus / Plus Query: 953 gccaaatccgagtaaaactgatgtgtggttaggggtggtgagaggcggaggcatgttctt 1012 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36530 gccaaatccgagtaaaactgatgtgtggttaggggtggtgagaggcggaggcatgttctt 36589 Query: 1013 caaattcttcatatttttcttcgccaacatctgcatccgctgttctagtaatactatcca 1072 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36590 caaattcttcatatttttcttcgccaacatctgcatccgctgttctagtaatactatcca 36649 Query: 1073 tatgttcggttattatattctaggttcctttgtgacatttcctgtaaaacttatttggat 1132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36650 tatgttcggttattatattctaggttcctttgtgacatttcctgtaaaacttatttggat 36709 Query: 1133 ggattattgagatttatgtactttcttaatggtgagaatttacttggatt 1182 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36710 ggattattgagatttatgtactttcttaatggtgagaatttacttggatt 36759 Score = 218 bits (110), Expect = 4e-53 Identities = 110/110 (100%) Strand = Plus / Plus Query: 84 gaggttgctgtaagcaaggaaggatgagtaggcgctggagccggaccatttacgttggga 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33060 gaggttgctgtaagcaaggaaggatgagtaggcgctggagccggaccatttacgttggga 33119 Query: 144 acctcccaggggatatcagggagcgggaggtggaggatctgttctacaag 193 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33120 acctcccaggggatatcagggagcgggaggtggaggatctgttctacaag 33169 Score = 206 bits (104), Expect = 1e-49 Identities = 104/104 (100%) Strand = Plus / Plus Query: 334 ggttgaacttgcacatggtgggagggctaactcttcatcccttcctaacagccatggtgg 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33766 ggttgaacttgcacatggtgggagggctaactcttcatcccttcctaacagccatggtgg 33825 Query: 394 tggaggacgccgtggtggtgtctctaggcatacagagtatcgtg 437 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33826 tggaggacgccgtggtggtgtctctaggcatacagagtatcgtg 33869 Score = 172 bits (87), Expect = 2e-39 Identities = 87/87 (100%) Strand = Plus / Plus Query: 649 ggtgaaggagtatgctggcaaaagcagccgctcctattctcgcagccgtagcagaagccg 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34988 ggtgaaggagtatgctggcaaaagcagccgctcctattctcgcagccgtagcagaagccg 35047 Query: 709 aagtggcagctacagcaggagtccgag 735 ||||||||||||||||||||||||||| Sbjct: 35048 aagtggcagctacagcaggagtccgag 35074 Score = 170 bits (86), Expect = 7e-39 Identities = 100/107 (93%) Strand = Plus / Plus Query: 734 agcaagtctccaaagnnnnnnncatcacgccgttcagcgtcaagatctcggtcaagatct 793 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 35144 agcaagtctccaaagaaaaaaacatcacgccgttcagcgtcaagatctcggtcaagatct 35203 Query: 794 gtttcttcccattcaaggtcaccgtcgaagggacgctctccatcaag 840 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35204 gtttcttcccattcaaggtcaccgtcgaagggacgctctccatcaag 35250 Score = 157 bits (79), Expect = 1e-34 Identities = 79/79 (100%) Strand = Plus / Plus Query: 258 agtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaactttg 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33623 agtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaactttg 33682 Query: 318 atgggaatcgcctgagggt 336 ||||||||||||||||||| Sbjct: 33683 atgggaatcgcctgagggt 33701 Score = 151 bits (76), Expect = 7e-33 Identities = 76/76 (100%) Strand = Plus / Plus Query: 878 cccgttgtcaatggtgaagcagcaagccccaagagggacccaagcaggagcccatcgcgt 937 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36366 cccgttgtcaatggtgaagcagcaagccccaagagggacccaagcaggagcccatcgcgt 36425 Query: 938 tcccgctctcctgatg 953 |||||||||||||||| Sbjct: 36426 tcccgctctcctgatg 36441 Score = 135 bits (68), Expect = 4e-28 Identities = 68/68 (100%) Strand = Plus / Plus Query: 192 agtatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctttgctt 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33463 agtatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctttgctt 33522 Query: 252 ttgttgag 259 |||||||| Sbjct: 33523 ttgttgag 33530 Score = 117 bits (59), Expect = 1e-22 Identities = 59/59 (100%) Strand = Plus / Plus Query: 593 ataaggaagcttgatgatactgaatttaaaaatgccttctctcgagcgcctataagggt 651 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34845 ataaggaagcttgatgatactgaatttaaaaatgccttctctcgagcgcctataagggt 34903 Score = 107 bits (54), Expect = 9e-20 Identities = 54/54 (100%) Strand = Plus / Plus Query: 483 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagg 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34108 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagg 34161 Score = 103 bits (52), Expect = 1e-18 Identities = 55/56 (98%) Strand = Plus / Plus Query: 542 ggtactattggaattgttgattatacaaactatgatgatatgaagtatgctataag 597 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 34624 ggtactattggaattgttgattatacaaactatgatgatatgaagtatgctgtaag 34679 Score = 97.6 bits (49), Expect = 9e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 437 gttctggttactggactaccttcttctgcatcatggcaagatctaaagg 485 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33954 gttctggttactggactaccttcttctgcatcatggcaagatctaaagg 34002 Score = 77.8 bits (39), Expect = 8e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 839 agatcaccagcaaaatcccgatcacctgttgctgcatct 877 ||||||||||||||||||||||||||||||||||||||| Sbjct: 36260 agatcaccagcaaaatcccgatcacctgttgctgcatct 36298 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/60 (95%), Gaps = 3/60 (5%) Strand = Plus / Plus Query: 25 cccttcgtcccccggccggcgacgacgccgcgcgcgccgcgaacccgcccccctcctccg 84 ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| Sbjct: 32516 cccttcgtcccccggccgg-ga-gacgccgcgcgc-ccgcgaacccgcccccctcctccg 32572 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1038 aacatctgcatccgctgttctagta 1062 |||||| |||||||||||||||||| Sbjct: 42748 aacatcggcatccgctgttctagta 42772
>gb|DQ244544.1| Zea mays clone 9050 mRNA sequence Length = 1156 Score = 208 bits (105), Expect = 3e-50 Identities = 171/193 (88%) Strand = Plus / Plus Query: 426 cagagtatcgtgttctggttactggactaccttcttctgcatcatggcaagatctaaagg 485 |||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||| Sbjct: 412 cagagtatcgtgttcttgtcactggactgccttcttctgcatcatggcaggatttaaagg 471 Query: 486 atcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtggtggta 545 |||||||| | |||||||||||||||||||||||||| |||||||| || || ||||| | Sbjct: 472 atcatatgcggaaggctggtgatgtttgtttctctgaagtgtatcgcgaaggcggtggca 531 Query: 546 ctattggaattgttgattatacaaactatgatgatatgaagtatgctataaggaagcttg 605 | | |||||||| || || ||||| |||||||||||||| |||||||||| |||||| | Sbjct: 532 ccgtaggaattgtggactacacaaattatgatgatatgaaatatgctataaagaagctgg 591 Query: 606 atgatactgaatt 618 ||||||||||||| Sbjct: 592 atgatactgaatt 604 Score = 190 bits (96), Expect = 8e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 102 gaaggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggatatca 161 |||||||||| |||||||||||||| || || ||||| ||||||||||| || || ||| Sbjct: 79 gaaggatgagcaggcgctggagccgcacgatctacgtcgggaacctccccggcgacatcc 138 Query: 162 gggagcgggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttga 221 ||||| ||||||||||||||||||||||||||||||| || || || |||||| ||| Sbjct: 139 gggagagggaggtggaggatctgttctacaagtatggtaaaattgttgacattgacctga 198 Query: 222 aggtccccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccg 281 ||||||||||||| |||||||| | |||||||||||||||||||||||| |||||||| | Sbjct: 199 aggtccccccaagaccacctggttatgcttttgttgagtttgaagatcctcgtgatgctg 258 Query: 282 aggatgcgattcagggccgagatggctacaactttgatgg 321 |||| || ||| || || ||||| |||||||||||||| Sbjct: 259 aggaggcaattgctggacgggatggatacaactttgatgg 298 Score = 93.7 bits (47), Expect = 1e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 761 cgccgttcagcgtcaagatctcggtcaagatctgtttcttcccattcaaggtcaccgtcg 820 ||||||||| | || ||||| |||||||||||||||||||| | ||||||||| || || Sbjct: 738 cgccgttcatcatctagatcccggtcaagatctgtttcttctcgttcaaggtccccatca 797 Query: 821 aagggacgctctccatcaagatcaccagcaa 851 || ||||| |||||||||||||||||||||| Sbjct: 798 aaaggacgttctccatcaagatcaccagcaa 828 Score = 58.0 bits (29), Expect = 8e-05 Identities = 61/71 (85%), Gaps = 3/71 (4%) Strand = Plus / Plus Query: 887 aatggtgaagcagcaagccccaagaggga---cccaagcaggagcccatcgcgttcccgc 943 ||||||||||||||||||||||||| | | ||||| |||||||||||| | || ||| Sbjct: 858 aatggtgaagcagcaagccccaagaagcagagcccaaacaggagcccatctggctcacgc 917 Query: 944 tctcctgatgc 954 ||||||||||| Sbjct: 918 tctcctgatgc 928
>gb|AY108591.1| Zea mays PCO125156 mRNA sequence Length = 1255 Score = 208 bits (105), Expect = 3e-50 Identities = 171/193 (88%) Strand = Plus / Plus Query: 426 cagagtatcgtgttctggttactggactaccttcttctgcatcatggcaagatctaaagg 485 |||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||| Sbjct: 454 cagagtatcgtgttcttgtcactggactgccttcttctgcatcatggcaggatttaaagg 513 Query: 486 atcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtggtggta 545 |||||||| | |||||||||||||||||||||||||| |||||||| || || ||||| | Sbjct: 514 atcatatgcggaaggctggtgatgtttgtttctctgaagtgtatcgcgaaggcggtggca 573 Query: 546 ctattggaattgttgattatacaaactatgatgatatgaagtatgctataaggaagcttg 605 | | |||||||| || || ||||| |||||||||||||| |||||||||| |||||| | Sbjct: 574 ccgtaggaattgtggactacacaaattatgatgatatgaaatatgctataaagaagctgg 633 Query: 606 atgatactgaatt 618 ||||||||||||| Sbjct: 634 atgatactgaatt 646 Score = 190 bits (96), Expect = 8e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 102 gaaggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggatatca 161 |||||||||| |||||||||||||| || || ||||| ||||||||||| || || ||| Sbjct: 121 gaaggatgagcaggcgctggagccgcacgatctacgtcgggaacctccccggcgacatcc 180 Query: 162 gggagcgggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttga 221 ||||| ||||||||||||||||||||||||||||||| || || || |||||| ||| Sbjct: 181 gggagagggaggtggaggatctgttctacaagtatggtaaaattgttgacattgacctga 240 Query: 222 aggtccccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccg 281 ||||||||||||| |||||||| | |||||||||||||||||||||||| |||||||| | Sbjct: 241 aggtccccccaagaccacctggttatgcttttgttgagtttgaagatcctcgtgatgctg 300 Query: 282 aggatgcgattcagggccgagatggctacaactttgatgg 321 |||| || ||| || || ||||| |||||||||||||| Sbjct: 301 aggaggcaattgctggacgggatggatacaactttgatgg 340 Score = 93.7 bits (47), Expect = 1e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 761 cgccgttcagcgtcaagatctcggtcaagatctgtttcttcccattcaaggtcaccgtcg 820 ||||||||| | || ||||| |||||||||||||||||||| | ||||||||| || || Sbjct: 780 cgccgttcatcatctagatcccggtcaagatctgtttcttctcgttcaaggtccccatca 839 Query: 821 aagggacgctctccatcaagatcaccagcaa 851 || ||||| |||||||||||||||||||||| Sbjct: 840 aaaggacgttctccatcaagatcaccagcaa 870 Score = 58.0 bits (29), Expect = 8e-05 Identities = 61/71 (85%), Gaps = 3/71 (4%) Strand = Plus / Plus Query: 887 aatggtgaagcagcaagccccaagaggga---cccaagcaggagcccatcgcgttcccgc 943 ||||||||||||||||||||||||| | | ||||| |||||||||||| | || ||| Sbjct: 900 aatggtgaagcagcaagccccaagaagcagagcccaaacaggagcccatctggctcacgc 959 Query: 944 tctcctgatgc 954 ||||||||||| Sbjct: 960 tctcctgatgc 970
>emb|CT828304.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA019C14, full insert sequence Length = 944 Score = 204 bits (103), Expect = 5e-49 Identities = 258/309 (83%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 388 tggtggtggaggacgccgtggtggtgtctctaggcatacagagtatcgtgttctggttac 447 ||||||||||||||||||||||| | || ||||| |||| || |||||||||||||| Sbjct: 407 tggtggtggaggacgccgtggtg---tgtccaggcactcagaataccgtgttctggttac 463 Query: 448 tggactaccttcttctgcatcatggcaagatctaaaggatcatatgagaaaggctggtga 507 ||| | |||||||||||||||||||||||| ||||||| |||||| | ||||||||||| Sbjct: 464 tggtttgccttcttctgcatcatggcaagatttaaaggaccatatgcgcaaggctggtga 523 Query: 508 tgtttgtttctctgaggtgtatcgtgagggtggtggtactattggaattgttgattatac 567 |||||||||||| || |||||||| ||||| || |||||| | || ||||| || || || Sbjct: 524 tgtttgtttctcagaagtgtatcgcgagggcggcggtactgtagggattgtggactacac 583 Query: 568 aaactatgatgatatgaagtatgctataaggaagcttgatgatactgaatttaaaaatgc 627 |||||||||||| ||||| |||||||||| ||| |||||||| | |||||| | ||||| Sbjct: 584 aaactatgatgacatgaaatatgctataaagaaacttgatgacagtgaattcaggaatgc 643 Query: 628 cttctctcgagcgcctataagggtgaaggagtatgctggcaaaagcagccgctcctattc 687 ||| ||| || | |||||||||||||| |||| |||||| || |||||||||||| Sbjct: 644 cttttctaaaggtcacataagggtgaaggaatatgatggcaagcgcgcccgctcctattc 703 Query: 688 tcgcagccg 696 || ||||| Sbjct: 704 acgtagccg 712 Score = 167 bits (84), Expect = 1e-37 Identities = 153/176 (86%) Strand = Plus / Plus Query: 104 aggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggatatcagg 163 |||||||| ||||| ||||||||||| || ||||| ||||| ||||| || || |||||| Sbjct: 114 aggatgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagg 173 Query: 164 gagcgggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaag 223 ||| |||||||||||||||| |||||||||||||| || || || || |||||||||||| Sbjct: 174 gagagggaggtggaggatctcttctacaagtatggccgaattgttgatattgacttgaag 233 Query: 224 gtccccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||| || |||||||| |||| ||||||||| |||||||||||||| |||||||| Sbjct: 234 atccctccgaggccaccaggctatgcttttgtagagtttgaagatcctcgtgatgc 289 Score = 56.0 bits (28), Expect = 3e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 777 gatctcggtcaagatctgtttcttcccattcaaggtcaccgtcgaagggacgctctccat 836 ||||||| ||||| ||||||||||||| |||| ||||| | || || || |||||||||| Sbjct: 790 gatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccat 849 Query: 837 caag 840 |||| Sbjct: 850 caag 853
>ref|NM_001056617.1| Oryza sativa (japonica cultivar-group) Os03g0344100 (Os03g0344100) mRNA, complete cds Length = 1500 Score = 204 bits (103), Expect = 5e-49 Identities = 258/309 (83%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 388 tggtggtggaggacgccgtggtggtgtctctaggcatacagagtatcgtgttctggttac 447 ||||||||||||||||||||||| | || ||||| |||| || |||||||||||||| Sbjct: 442 tggtggtggaggacgccgtggtg---tgtccaggcactcagaataccgtgttctggttac 498 Query: 448 tggactaccttcttctgcatcatggcaagatctaaaggatcatatgagaaaggctggtga 507 ||| | |||||||||||||||||||||||| ||||||| |||||| | ||||||||||| Sbjct: 499 tggtttgccttcttctgcatcatggcaagatttaaaggaccatatgcgcaaggctggtga 558 Query: 508 tgtttgtttctctgaggtgtatcgtgagggtggtggtactattggaattgttgattatac 567 |||||||||||| || |||||||| ||||| || |||||| | || ||||| || || || Sbjct: 559 tgtttgtttctcagaagtgtatcgcgagggcggcggtactgtagggattgtggactacac 618 Query: 568 aaactatgatgatatgaagtatgctataaggaagcttgatgatactgaatttaaaaatgc 627 |||||||||||| ||||| |||||||||| ||| |||||||| | |||||| | ||||| Sbjct: 619 aaactatgatgacatgaaatatgctataaagaaacttgatgacagtgaattcaggaatgc 678 Query: 628 cttctctcgagcgcctataagggtgaaggagtatgctggcaaaagcagccgctcctattc 687 ||| ||| || | |||||||||||||| |||| |||||| || |||||||||||| Sbjct: 679 cttttctaaaggtcacataagggtgaaggaatatgatggcaagcgcgcccgctcctattc 738 Query: 688 tcgcagccg 696 || ||||| Sbjct: 739 acgtagccg 747 Score = 167 bits (84), Expect = 1e-37 Identities = 153/176 (86%) Strand = Plus / Plus Query: 104 aggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggatatcagg 163 |||||||| ||||| ||||||||||| || ||||| ||||| ||||| || || |||||| Sbjct: 149 aggatgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagg 208 Query: 164 gagcgggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaag 223 ||| |||||||||||||||| |||||||||||||| || || || || |||||||||||| Sbjct: 209 gagagggaggtggaggatctcttctacaagtatggccgaattgttgatattgacttgaag 268 Query: 224 gtccccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||| || |||||||| |||| ||||||||| |||||||||||||| |||||||| Sbjct: 269 atccctccgaggccaccaggctatgcttttgtagagtttgaagatcctcgtgatgc 324 Score = 69.9 bits (35), Expect = 2e-08 Identities = 67/77 (87%), Gaps = 3/77 (3%) Strand = Plus / Plus Query: 887 aatggtgaagcagcaagccccaaga---gggacccaagcaggagcccatcgcgttcccgc 943 |||||||||||| |||||||||||| || |||||||||||||||||| ||||| || Sbjct: 1146 aatggtgaagcatcaagccccaagaaacggagcccaagcaggagcccatctcgttcacgg 1205 Query: 944 tctcctgatgccaaatc 960 ||||||||||| ||||| Sbjct: 1206 tctcctgatgcgaaatc 1222 Score = 58.0 bits (29), Expect = 8e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 777 gatctcggtcaagatctgtttcttcccattcaaggtcaccgtcgaagggacgctctccat 836 ||||||| ||||| ||||||||||||| |||| ||||| | || || || |||||||||| Sbjct: 825 gatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccat 884 Query: 837 caaga 841 ||||| Sbjct: 885 caaga 889
>dbj|AK121333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119J07, full insert sequence Length = 3430 Score = 204 bits (103), Expect = 5e-49 Identities = 258/309 (83%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 388 tggtggtggaggacgccgtggtggtgtctctaggcatacagagtatcgtgttctggttac 447 ||||||||||||||||||||||| | || ||||| |||| || |||||||||||||| Sbjct: 408 tggtggtggaggacgccgtggtg---tgtccaggcactcagaataccgtgttctggttac 464 Query: 448 tggactaccttcttctgcatcatggcaagatctaaaggatcatatgagaaaggctggtga 507 ||| | |||||||||||||||||||||||| ||||||| |||||| | ||||||||||| Sbjct: 465 tggtttgccttcttctgcatcatggcaagatttaaaggaccatatgcgcaaggctggtga 524 Query: 508 tgtttgtttctctgaggtgtatcgtgagggtggtggtactattggaattgttgattatac 567 |||||||||||| || |||||||| ||||| || |||||| | || ||||| || || || Sbjct: 525 tgtttgtttctcagaagtgtatcgcgagggcggcggtactgtagggattgtggactacac 584 Query: 568 aaactatgatgatatgaagtatgctataaggaagcttgatgatactgaatttaaaaatgc 627 |||||||||||| ||||| |||||||||| ||| |||||||| | |||||| | ||||| Sbjct: 585 aaactatgatgacatgaaatatgctataaagaaacttgatgacagtgaattcaggaatgc 644 Query: 628 cttctctcgagcgcctataagggtgaaggagtatgctggcaaaagcagccgctcctattc 687 ||| ||| || | |||||||||||||| |||| |||||| || |||||||||||| Sbjct: 645 cttttctaaaggtcacataagggtgaaggaatatgatggcaagcgcgcccgctcctattc 704 Query: 688 tcgcagccg 696 || ||||| Sbjct: 705 acgtagccg 713 Score = 167 bits (84), Expect = 1e-37 Identities = 153/176 (86%) Strand = Plus / Plus Query: 104 aggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggatatcagg 163 |||||||| ||||| ||||||||||| || ||||| ||||| ||||| || || |||||| Sbjct: 115 aggatgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagg 174 Query: 164 gagcgggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaag 223 ||| |||||||||||||||| |||||||||||||| || || || || |||||||||||| Sbjct: 175 gagagggaggtggaggatctcttctacaagtatggccgaattgttgatattgacttgaag 234 Query: 224 gtccccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||| || |||||||| |||| ||||||||| |||||||||||||| |||||||| Sbjct: 235 atccctccgaggccaccaggctatgcttttgtagagtttgaagatcctcgtgatgc 290 Score = 79.8 bits (40), Expect = 2e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 777 gatctcggtcaagatctgtttcttcccattcaaggtcaccgtcgaagggacgctctccat 836 ||||||| ||||| ||||||||||||| |||| ||||| | || || || |||||||||| Sbjct: 791 gatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccat 850 Query: 837 caagatcaccagcaaaatcc 856 ||||||||||||||| |||| Sbjct: 851 caagatcaccagcaagatcc 870 Score = 69.9 bits (35), Expect = 2e-08 Identities = 67/77 (87%), Gaps = 3/77 (3%) Strand = Plus / Plus Query: 887 aatggtgaagcagcaagccccaaga---gggacccaagcaggagcccatcgcgttcccgc 943 |||||||||||| |||||||||||| || |||||||||||||||||| ||||| || Sbjct: 895 aatggtgaagcatcaagccccaagaaacggagcccaagcaggagcccatctcgttcacgg 954 Query: 944 tctcctgatgccaaatc 960 ||||||||||| ||||| Sbjct: 955 tctcctgatgcgaaatc 971
>dbj|AK065547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034E09, full insert sequence Length = 1501 Score = 204 bits (103), Expect = 5e-49 Identities = 258/309 (83%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 388 tggtggtggaggacgccgtggtggtgtctctaggcatacagagtatcgtgttctggttac 447 ||||||||||||||||||||||| | || ||||| |||| || |||||||||||||| Sbjct: 443 tggtggtggaggacgccgtggtg---tgtccaggcactcagaataccgtgttctggttac 499 Query: 448 tggactaccttcttctgcatcatggcaagatctaaaggatcatatgagaaaggctggtga 507 ||| | |||||||||||||||||||||||| ||||||| |||||| | ||||||||||| Sbjct: 500 tggtttgccttcttctgcatcatggcaagatttaaaggaccatatgcgcaaggctggtga 559 Query: 508 tgtttgtttctctgaggtgtatcgtgagggtggtggtactattggaattgttgattatac 567 |||||||||||| || |||||||| ||||| || |||||| | || ||||| || || || Sbjct: 560 tgtttgtttctcagaagtgtatcgcgagggcggcggtactgtagggattgtggactacac 619 Query: 568 aaactatgatgatatgaagtatgctataaggaagcttgatgatactgaatttaaaaatgc 627 |||||||||||| ||||| |||||||||| ||| |||||||| | |||||| | ||||| Sbjct: 620 aaactatgatgacatgaaatatgctataaagaaacttgatgacagtgaattcaggaatgc 679 Query: 628 cttctctcgagcgcctataagggtgaaggagtatgctggcaaaagcagccgctcctattc 687 ||| ||| || | |||||||||||||| |||| |||||| || |||||||||||| Sbjct: 680 cttttctaaaggtcacataagggtgaaggaatatgatggcaagcgcgcccgctcctattc 739 Query: 688 tcgcagccg 696 || ||||| Sbjct: 740 acgtagccg 748 Score = 167 bits (84), Expect = 1e-37 Identities = 153/176 (86%) Strand = Plus / Plus Query: 104 aggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggatatcagg 163 |||||||| ||||| ||||||||||| || ||||| ||||| ||||| || || |||||| Sbjct: 150 aggatgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagg 209 Query: 164 gagcgggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaag 223 ||| |||||||||||||||| |||||||||||||| || || || || |||||||||||| Sbjct: 210 gagagggaggtggaggatctcttctacaagtatggccgaattgttgatattgacttgaag 269 Query: 224 gtccccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||| || |||||||| |||| ||||||||| |||||||||||||| |||||||| Sbjct: 270 atccctccgaggccaccaggctatgcttttgtagagtttgaagatcctcgtgatgc 325 Score = 69.9 bits (35), Expect = 2e-08 Identities = 67/77 (87%), Gaps = 3/77 (3%) Strand = Plus / Plus Query: 887 aatggtgaagcagcaagccccaaga---gggacccaagcaggagcccatcgcgttcccgc 943 |||||||||||| |||||||||||| || |||||||||||||||||| ||||| || Sbjct: 1147 aatggtgaagcatcaagccccaagaaacggagcccaagcaggagcccatctcgttcacgg 1206 Query: 944 tctcctgatgccaaatc 960 ||||||||||| ||||| Sbjct: 1207 tctcctgatgcgaaatc 1223 Score = 58.0 bits (29), Expect = 8e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 777 gatctcggtcaagatctgtttcttcccattcaaggtcaccgtcgaagggacgctctccat 836 ||||||| ||||| ||||||||||||| |||| ||||| | || || || |||||||||| Sbjct: 826 gatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccat 885 Query: 837 caaga 841 ||||| Sbjct: 886 caaga 890
>dbj|AK061903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H07, full insert sequence Length = 1238 Score = 204 bits (103), Expect = 5e-49 Identities = 258/309 (83%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 388 tggtggtggaggacgccgtggtggtgtctctaggcatacagagtatcgtgttctggttac 447 ||||||||||||||||||||||| | || ||||| |||| || |||||||||||||| Sbjct: 378 tggtggtggaggacgccgtggtg---tgtccaggcactcagaataccgtgttctggttac 434 Query: 448 tggactaccttcttctgcatcatggcaagatctaaaggatcatatgagaaaggctggtga 507 ||| | |||||||||||||||||||||||| ||||||| |||||| | ||||||||||| Sbjct: 435 tggtttgccttcttctgcatcatggcaagatttaaaggaccatatgcgcaaggctggtga 494 Query: 508 tgtttgtttctctgaggtgtatcgtgagggtggtggtactattggaattgttgattatac 567 |||||||||||| || |||||||| ||||| || |||||| | || ||||| || || || Sbjct: 495 tgtttgtttctcagaagtgtatcgcgagggcggcggtactgtagggattgtggactacac 554 Query: 568 aaactatgatgatatgaagtatgctataaggaagcttgatgatactgaatttaaaaatgc 627 |||||||||||| ||||| |||||||||| ||| |||||||| | |||||| | ||||| Sbjct: 555 aaactatgatgacatgaaatatgctataaagaaacttgatgacagtgaattcaggaatgc 614 Query: 628 cttctctcgagcgcctataagggtgaaggagtatgctggcaaaagcagccgctcctattc 687 ||| ||| || | |||||||||||||| |||| |||||| || |||||||||||| Sbjct: 615 cttttctaaaggtcacataagggtgaaggaatatgatggcaagcgcgcccgctcctattc 674 Query: 688 tcgcagccg 696 || ||||| Sbjct: 675 acgtagccg 683 Score = 167 bits (84), Expect = 1e-37 Identities = 153/176 (86%) Strand = Plus / Plus Query: 104 aggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggatatcagg 163 |||||||| ||||| ||||||||||| || ||||| ||||| ||||| || || |||||| Sbjct: 85 aggatgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagg 144 Query: 164 gagcgggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaag 223 ||| |||||||||||||||| |||||||||||||| || || || || |||||||||||| Sbjct: 145 gagagggaggtggaggatctcttctacaagtatggccgaattgttgatattgacttgaag 204 Query: 224 gtccccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||| || |||||||| |||| ||||||||| |||||||||||||| |||||||| Sbjct: 205 atccctccgaggccaccaggctatgcttttgtagagtttgaagatcctcgtgatgc 260 Score = 79.8 bits (40), Expect = 2e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 777 gatctcggtcaagatctgtttcttcccattcaaggtcaccgtcgaagggacgctctccat 836 ||||||| ||||| ||||||||||||| |||| ||||| | || || || |||||||||| Sbjct: 761 gatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccat 820 Query: 837 caagatcaccagcaaaatcc 856 ||||||||||||||| |||| Sbjct: 821 caagatcaccagcaagatcc 840 Score = 69.9 bits (35), Expect = 2e-08 Identities = 67/77 (87%), Gaps = 3/77 (3%) Strand = Plus / Plus Query: 887 aatggtgaagcagcaagccccaaga---gggacccaagcaggagcccatcgcgttcccgc 943 |||||||||||| |||||||||||| || |||||||||||||||||| ||||| || Sbjct: 865 aatggtgaagcatcaagccccaagaaacggagcccaagcaggagcccatctcgttcacgg 924 Query: 944 tctcctgatgccaaatc 960 ||||||||||| ||||| Sbjct: 925 tctcctgatgcgaaatc 941
>ref|NM_001061858.1| Oryza sativa (japonica cultivar-group) Os05g0364600 (Os05g0364600) mRNA, complete cds Length = 1297 Score = 153 bits (77), Expect = 2e-33 Identities = 146/169 (86%) Strand = Plus / Plus Query: 441 tggttactggactaccttcttctgcatcatggcaagatctaaaggatcatatgagaaagg 500 ||||||||||| ||||||| || |||||||||||||| || |||||||||||||| | Sbjct: 409 tggttactggattaccttcgtcagcatcatggcaagacctcaaggatcatatgaggcgag 468 Query: 501 ctggtgatgtttgtttctctgaggtgtatcgtgagggtggtggtactattggaattgttg 560 |||||||||| ||||||||||| || || ||||||||||| | |||||||||||||||| Sbjct: 469 ctggtgatgtctgtttctctgatgtttaccgtgagggtggagcaactattggaattgttg 528 Query: 561 attatacaaactatgatgatatgaagtatgctataaggaagcttgatga 609 ||||||| |||||||| |||||||| | || ||||| ||||||||||| Sbjct: 529 attataccaactatgaggatatgaaacaagcgataagaaagcttgatga 577 Score = 95.6 bits (48), Expect = 4e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 168 gggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaaggtcc 227 |||| ||||||||||| ||||| |||||||| || || ||||| ||||||||||| | | Sbjct: 139 gggaagtggaggatctcttctataagtatggccgtattgtggatattgacttgaaaattc 198 Query: 228 ccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 | |||||||| ||||| | ||||||||||||||||||||| || |||||||| Sbjct: 199 ctccaaggcctcctggttatgcttttgttgagtttgaagaccctcgtgatgc 250
>emb|CT834463.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA005C24, full insert sequence Length = 1679 Score = 145 bits (73), Expect = 4e-31 Identities = 146/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 441 tggttactggactaccttcttctgcatcatggcaagatctaaaggatcatatgagaaagg 500 ||||||||||| ||||||| || |||||||||||||| || |||||||||||||| | Sbjct: 571 tggttactggattaccttcgtcagcatcatggcaagacctcaaggatcatatgaggcgag 630 Query: 501 ctggtgatgtttgtttctctgaggtgtatcgtgagggtggtggtactattggaattgttg 560 |||||||||| ||||||||||| || || ||||||||||| | |||||||||||||||| Sbjct: 631 ctggtgatgtctgtttctctgatgt-taccgtgagggtggagcaactattggaattgttg 689 Query: 561 attatacaaactatgatgatatgaagtatgctataaggaagcttgatga 609 ||||||| |||||||| |||||||| | || ||||| ||||||||||| Sbjct: 690 attataccaactatgaggatatgaaacaagcgataagaaagcttgatga 738 Score = 71.9 bits (36), Expect = 5e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 168 gggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaaggtcc 227 |||| ||||||||||| ||||| |||||||| || || ||||| ||||||||||| | | Sbjct: 176 gggaagtggaggatctcttctataagtatggccgtattgtggatattgacttgaaaattc 235 Query: 228 ccccaaggccacctggctttgcttttgttgag 259 | |||||||| ||||| | ||||||||||||| Sbjct: 236 ctccaaggcctcctggttatgcttttgttgag 267
>gb|AY109880.1| Zea mays CL49267_1 mRNA sequence Length = 1101 Score = 145 bits (73), Expect = 4e-31 Identities = 154/181 (85%) Strand = Plus / Minus Query: 435 gtgttctggttactggactaccttcttctgcatcatggcaagatctaaaggatcatatga 494 ||||| ||||||||||| |||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 725 gtgttatggttactggattaccttcttcagcatcatggcaagatctcaaggaccatatgc 666 Query: 495 gaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtggtggtactattggaa 554 | ||||||||||| |||||| |||| ||||||||||||| ||| | |||||||||| Sbjct: 665 ggcgagctggtgatgtctgtttcactgatgtgtatcgtgaggctggagcaactattggaa 606 Query: 555 ttgttgattatacaaactatgatgatatgaagtatgctataaggaagcttgatgatactg 614 | | ||||||||| |||||||| |||||||| | || ||||||||||| |||||| ||| Sbjct: 605 tagctgattatactaactatgaagatatgaaacacgcgataaggaagctagatgattctg 546 Query: 615 a 615 | Sbjct: 545 a 545 Score = 81.8 bits (41), Expect = 5e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 134 tacgttgggaacctcccaggggatatcagggagcgggaggtggaggatctgttctacaag 193 ||||| || |||||||| || || ||| | ||| |||| ||||| ||||| ||||||||| Sbjct: 1027 tacgtgggcaacctccccggcgacatccgcgagagggaagtggatgatctcttctacaag 968 Query: 194 tatggacggatagtggaaattgacttgaa 222 |||||||| |||||||||||||||||||| Sbjct: 967 tatggacgtatagtggaaattgacttgaa 939
>ref|NM_001049414.1| Oryza sativa (japonica cultivar-group) Os01g0316600 (Os01g0316600) mRNA, partial cds Length = 2194 Score = 119 bits (60), Expect = 2e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 398 ggacgccgtggtggtgtctctaggcatacagagtatcgtgttctggttactggactacct 457 ||||| ||||| ||||| ||||||| | | || ||||| ||| |||| ||||| ||||| Sbjct: 518 ggacgacgtggaggtgtttctaggcgttctgaatatcgcgttatggtcactggcttacct 577 Query: 458 tcttctgcatcatggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtttc 517 || || ||||||||||| ||||| ||||| |||||| | |||||||||||| || ||| Sbjct: 578 tcatcggcatcatggcaggatcttaaggaccatatgcggcgggctggtgatgtctgcttc 637 Query: 518 tctgaggtgtatcgtgagggtggtggtactattggaattgttgattatacaaactatgat 577 ||||| || || ||||||| ||| | || |||||||||| |||||||||| |||||| Sbjct: 638 tctgatgtataccgtgaggctggagcaaccgttggaattgtggattatacaacctatgaa 697 Query: 578 gatatgaagtatgctataaggaagcttgatga 609 || ||||||||||| || |||||||||||||| Sbjct: 698 gacatgaagtatgcgattaggaagcttgatga 729 Score = 91.7 bits (46), Expect = 6e-15 Identities = 127/154 (82%) Strand = Plus / Plus Query: 168 gggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaaggtcc 227 ||||||| |||||||| || |||||||| || || || |||| |||||||||||| | | Sbjct: 285 gggaggttgaggatctcttttacaagtacggtcgcattttggacattgacttgaagattc 344 Query: 228 ccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatg 287 | ||||| || ||||| | |||||||||| ||||||| |||||||||||||| || |||| Sbjct: 345 ctccaagacctcctggttatgcttttgtttagtttgaggatccccgtgatgctgatgatg 404 Query: 288 cgattcagggccgagatggctacaactttgatgg 321 | ||| ||||| ||||| || ||||||||||| Sbjct: 405 caatttgcggccgtgatgggtataactttgatgg 438
>dbj|AK103534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132A12, full insert sequence Length = 2196 Score = 119 bits (60), Expect = 2e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 398 ggacgccgtggtggtgtctctaggcatacagagtatcgtgttctggttactggactacct 457 ||||| ||||| ||||| ||||||| | | || ||||| ||| |||| ||||| ||||| Sbjct: 520 ggacgacgtggaggtgtttctaggcgttctgaatatcgcgttatggtcactggcttacct 579 Query: 458 tcttctgcatcatggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtttc 517 || || ||||||||||| ||||| ||||| |||||| | |||||||||||| || ||| Sbjct: 580 tcatcggcatcatggcaggatcttaaggaccatatgcggcgggctggtgatgtctgcttc 639 Query: 518 tctgaggtgtatcgtgagggtggtggtactattggaattgttgattatacaaactatgat 577 ||||| || || ||||||| ||| | || |||||||||| |||||||||| |||||| Sbjct: 640 tctgatgtataccgtgaggctggagcaaccgttggaattgtggattatacaacctatgaa 699 Query: 578 gatatgaagtatgctataaggaagcttgatga 609 || ||||||||||| || |||||||||||||| Sbjct: 700 gacatgaagtatgcgattaggaagcttgatga 731 Score = 91.7 bits (46), Expect = 6e-15 Identities = 127/154 (82%) Strand = Plus / Plus Query: 168 gggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaaggtcc 227 ||||||| |||||||| || |||||||| || || || |||| |||||||||||| | | Sbjct: 287 gggaggttgaggatctcttttacaagtacggtcgcattttggacattgacttgaagattc 346 Query: 228 ccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatg 287 | ||||| || ||||| | |||||||||| ||||||| |||||||||||||| || |||| Sbjct: 347 ctccaagacctcctggttatgcttttgtttagtttgaggatccccgtgatgctgatgatg 406 Query: 288 cgattcagggccgagatggctacaactttgatgg 321 | ||| ||||| ||||| || ||||||||||| Sbjct: 407 caatttgcggccgtgatgggtataactttgatgg 440
>dbj|AK071503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091N08, full insert sequence Length = 1293 Score = 119 bits (60), Expect = 2e-23 Identities = 142/169 (84%), Gaps = 4/169 (2%) Strand = Plus / Plus Query: 441 tggttactggactaccttcttctgcatcatggcaagatctaaaggatcatatgagaaagg 500 ||||||||||| ||||||| || |||||||||||||| || |||||||||||||| | Sbjct: 409 tggttactggattaccttcgtcagcatcatggcaagacctcaaggatcatatgaggcgag 468 Query: 501 ctggtgatgtttgtttctctgaggtgtatcgtgagggtggtggtactattggaattgttg 560 |||||||||| ||||||||||| || || ||||||||||| | | ||||||||||| Sbjct: 469 ctggtgatgtctgtttctctgatgtttaccgtgagggtgg----agcaatggaattgttg 524 Query: 561 attatacaaactatgatgatatgaagtatgctataaggaagcttgatga 609 ||||||| |||||||| |||||||| | || ||||| ||||||||||| Sbjct: 525 attataccaactatgaggatatgaaacaagcgataagaaagcttgatga 573 Score = 95.6 bits (48), Expect = 4e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 168 gggaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaaggtcc 227 |||| ||||||||||| ||||| |||||||| || || ||||| ||||||||||| | | Sbjct: 139 gggaagtggaggatctcttctataagtatggccgtattgtggatattgacttgaaaattc 198 Query: 228 ccccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 | |||||||| ||||| | ||||||||||||||||||||| || |||||||| Sbjct: 199 ctccaaggcctcctggttatgcttttgttgagtttgaagaccctcgtgatgc 250
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 117 bits (59), Expect = 1e-22 Identities = 86/95 (90%) Strand = Plus / Minus Query: 99 aaggaaggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggata 158 |||||||||||||||||||||||||| |||| ||||| || ||||||||||| || || | Sbjct: 28420118 aaggaaggatgagtaggcgctggagcaggacaatttatgtcgggaacctcccgggcgaca 28420059 Query: 159 tcagggagcgggaggtggaggatctgttctacaag 193 |||||||| ||||||| |||||||||||||||||| Sbjct: 28420058 tcagggagagggaggtagaggatctgttctacaag 28420024 Score = 81.8 bits (41), Expect = 5e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 437 gttctggttactggactaccttcttctgcatcatggcaagatctaaagg 485 |||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 28419183 gttctggttactggactaccttcttcagcatcatggcaagacctaaagg 28419135 Score = 79.8 bits (40), Expect = 2e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 192 agtatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctttgctt 251 |||||||||| || || || |||||||||||| ||||||||||||| ||||| ||||||| Sbjct: 28419782 agtatggacgcattgttgatattgacttgaagatccccccaaggccgcctggttttgctt 28419723 Query: 252 ttgttgag 259 |||||||| Sbjct: 28419722 ttgttgag 28419715 Score = 77.8 bits (39), Expect = 8e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 483 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtggtg 542 |||| |||||| |||| |||||||||||||||| |||||| ||||| ||||||||||||| Sbjct: 28419027 aggaccatatgcgaaatgctggtgatgtttgttactctgaagtgtaccgtgagggtggtg 28418968 Query: 543 gta 545 ||| Sbjct: 28418967 gta 28418965 Score = 73.8 bits (37), Expect = 1e-09 Identities = 73/85 (85%) Strand = Plus / Minus Query: 756 catcacgccgttcagcgtcaagatctcggtcaagatctgtttcttcccattcaaggtcac 815 |||||||||||||||| || |||||||| || ||||| | |||||||| |||||| ||| Sbjct: 28417885 catcacgccgttcagcatctagatctcgatcgagatcagcttcttcccgttcaagatcag 28417826 Query: 816 cgtcgaagggacgctctccatcaag 840 ||| ||||| |||||||||||||| Sbjct: 28417825 agtcaaaggggcgctctccatcaag 28417801 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 542 ggtactattggaattgttgattatacaaactatgatgatatgaagtatgctataag 597 |||||||| |||||||| || || |||||||||||||| |||||||||||| |||| Sbjct: 28418451 ggtactataggaattgtagactacacaaactatgatgacatgaagtatgctgtaag 28418396 Score = 63.9 bits (32), Expect = 1e-06 Identities = 82/98 (83%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 338 gaacttgcacatggtgggagggctaactcttcatcccttcctaacagccatggtggtgga 397 |||||||||||||||||||| | ||||||||| ||| || |||| |||||| || Sbjct: 28419374 gaacttgcacatggtgggagaggtaactcttcctccttt---aacaattctggtggaggg 28419318 Query: 398 ggacgccgtggtggtgtctctaggcatacagagtatcg 435 ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 28419317 ggacgtcgtgggggtgtatctaggcatacagagtatcg 28419280 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 916 cccaagcaggagcccatcgcgttcccgctctcctgatg 953 |||||||||||||||||| |||||||| |||||||||| Sbjct: 28416656 cccaagcaggagcccatcacgttcccgatctcctgatg 28416619 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Minus Query: 596 aggaagcttgatgatactgaatttaaaaatgccttctc 633 ||||| ||||||||| |||||||||| ||||||||||| Sbjct: 28418209 aggaaacttgatgattctgaatttaagaatgccttctc 28418172 Score = 46.1 bits (23), Expect = 0.29 Identities = 56/67 (83%) Strand = Plus / Minus Query: 258 agtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaactttg 317 |||| ||||||||||||||||| || ||||| || | || || |||||||| || |||| Sbjct: 28419522 agttcgaagatccccgtgatgctgaagatgcaatccgtggacgggatggctataattttg 28419463 Query: 318 atgggaa 324 ||||||| Sbjct: 28419462 atgggaa 28419456 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 886 caatggtgaagcagcaagccccaaga 911 ||||||||| |||||||||||||||| Sbjct: 28416719 caatggtgatgcagcaagccccaaga 28416694 Score = 44.1 bits (22), Expect = 1.2 Identities = 64/78 (82%) Strand = Plus / Minus Query: 649 ggtgaaggagtatgctggcaaaagcagccgctcctattctcgcagccgtagcagaagccg 708 |||||||||||||| ||| || ||||||| || || || || ||||| ||| |||| || Sbjct: 28418073 ggtgaaggagtatgatggaaagcgcagccgttcatactcacgaagccgaagccgaagtcg 28418014 Query: 709 aagtggcagctacagcag 726 | || ||||||||||||| Sbjct: 28418013 aggtcgcagctacagcag 28417996
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 117 bits (59), Expect = 1e-22 Identities = 86/95 (90%) Strand = Plus / Minus Query: 99 aaggaaggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggata 158 |||||||||||||||||||||||||| |||| ||||| || ||||||||||| || || | Sbjct: 145681 aaggaaggatgagtaggcgctggagcaggacaatttatgtcgggaacctcccgggcgaca 145622 Query: 159 tcagggagcgggaggtggaggatctgttctacaag 193 |||||||| ||||||| |||||||||||||||||| Sbjct: 145621 tcagggagagggaggtagaggatctgttctacaag 145587 Score = 81.8 bits (41), Expect = 5e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 437 gttctggttactggactaccttcttctgcatcatggcaagatctaaagg 485 |||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 144746 gttctggttactggactaccttcttcagcatcatggcaagacctaaagg 144698 Score = 79.8 bits (40), Expect = 2e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 192 agtatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctttgctt 251 |||||||||| || || || |||||||||||| ||||||||||||| ||||| ||||||| Sbjct: 145345 agtatggacgcattgttgatattgacttgaagatccccccaaggccgcctggttttgctt 145286 Query: 252 ttgttgag 259 |||||||| Sbjct: 145285 ttgttgag 145278 Score = 77.8 bits (39), Expect = 8e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 483 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtggtg 542 |||| |||||| |||| |||||||||||||||| |||||| ||||| ||||||||||||| Sbjct: 144590 aggaccatatgcgaaatgctggtgatgtttgttactctgaagtgtaccgtgagggtggtg 144531 Query: 543 gta 545 ||| Sbjct: 144530 gta 144528 Score = 73.8 bits (37), Expect = 1e-09 Identities = 73/85 (85%) Strand = Plus / Minus Query: 756 catcacgccgttcagcgtcaagatctcggtcaagatctgtttcttcccattcaaggtcac 815 |||||||||||||||| || |||||||| || ||||| | |||||||| |||||| ||| Sbjct: 143448 catcacgccgttcagcatctagatctcgatcgagatcagcttcttcccgttcaagatcag 143389 Query: 816 cgtcgaagggacgctctccatcaag 840 ||| ||||| |||||||||||||| Sbjct: 143388 agtcaaaggggcgctctccatcaag 143364 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 542 ggtactattggaattgttgattatacaaactatgatgatatgaagtatgctataag 597 |||||||| |||||||| || || |||||||||||||| |||||||||||| |||| Sbjct: 144014 ggtactataggaattgtagactacacaaactatgatgacatgaagtatgctgtaag 143959 Score = 63.9 bits (32), Expect = 1e-06 Identities = 82/98 (83%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 338 gaacttgcacatggtgggagggctaactcttcatcccttcctaacagccatggtggtgga 397 |||||||||||||||||||| | ||||||||| ||| || |||| |||||| || Sbjct: 144937 gaacttgcacatggtgggagaggtaactcttcctccttt---aacaattctggtggaggg 144881 Query: 398 ggacgccgtggtggtgtctctaggcatacagagtatcg 435 ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 144880 ggacgtcgtgggggtgtatctaggcatacagagtatcg 144843 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 916 cccaagcaggagcccatcgcgttcccgctctcctgatg 953 |||||||||||||||||| |||||||| |||||||||| Sbjct: 142219 cccaagcaggagcccatcacgttcccgatctcctgatg 142182 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Minus Query: 596 aggaagcttgatgatactgaatttaaaaatgccttctc 633 ||||| ||||||||| |||||||||| ||||||||||| Sbjct: 143772 aggaaacttgatgattctgaatttaagaatgccttctc 143735 Score = 46.1 bits (23), Expect = 0.29 Identities = 56/67 (83%) Strand = Plus / Minus Query: 258 agtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaactttg 317 |||| ||||||||||||||||| || ||||| || | || || |||||||| || |||| Sbjct: 145085 agttcgaagatccccgtgatgctgaagatgcaatccgtggacgggatggctataattttg 145026 Query: 318 atgggaa 324 ||||||| Sbjct: 145025 atgggaa 145019 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 886 caatggtgaagcagcaagccccaaga 911 ||||||||| |||||||||||||||| Sbjct: 142282 caatggtgatgcagcaagccccaaga 142257 Score = 44.1 bits (22), Expect = 1.2 Identities = 64/78 (82%) Strand = Plus / Minus Query: 649 ggtgaaggagtatgctggcaaaagcagccgctcctattctcgcagccgtagcagaagccg 708 |||||||||||||| ||| || ||||||| || || || || ||||| ||| |||| || Sbjct: 143636 ggtgaaggagtatgatggaaagcgcagccgttcatactcacgaagccgaagccgaagtcg 143577 Query: 709 aagtggcagctacagcag 726 | || ||||||||||||| Sbjct: 143576 aggtcgcagctacagcag 143559
>dbj|AP006269.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0304A10 Length = 21211 Score = 117 bits (59), Expect = 1e-22 Identities = 86/95 (90%) Strand = Plus / Minus Query: 99 aaggaaggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggata 158 |||||||||||||||||||||||||| |||| ||||| || ||||||||||| || || | Sbjct: 1905 aaggaaggatgagtaggcgctggagcaggacaatttatgtcgggaacctcccgggcgaca 1846 Query: 159 tcagggagcgggaggtggaggatctgttctacaag 193 |||||||| ||||||| |||||||||||||||||| Sbjct: 1845 tcagggagagggaggtagaggatctgttctacaag 1811 Score = 81.8 bits (41), Expect = 5e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 437 gttctggttactggactaccttcttctgcatcatggcaagatctaaagg 485 |||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 970 gttctggttactggactaccttcttcagcatcatggcaagacctaaagg 922 Score = 79.8 bits (40), Expect = 2e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 192 agtatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctttgctt 251 |||||||||| || || || |||||||||||| ||||||||||||| ||||| ||||||| Sbjct: 1569 agtatggacgcattgttgatattgacttgaagatccccccaaggccgcctggttttgctt 1510 Query: 252 ttgttgag 259 |||||||| Sbjct: 1509 ttgttgag 1502 Score = 77.8 bits (39), Expect = 8e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 483 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtggtg 542 |||| |||||| |||| |||||||||||||||| |||||| ||||| ||||||||||||| Sbjct: 814 aggaccatatgcgaaatgctggtgatgtttgttactctgaagtgtaccgtgagggtggtg 755 Query: 543 gta 545 ||| Sbjct: 754 gta 752 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 542 ggtactattggaattgttgattatacaaactatgatgatatgaagtatgctataag 597 |||||||| |||||||| || || |||||||||||||| |||||||||||| |||| Sbjct: 238 ggtactataggaattgtagactacacaaactatgatgacatgaagtatgctgtaag 183 Score = 63.9 bits (32), Expect = 1e-06 Identities = 82/98 (83%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 338 gaacttgcacatggtgggagggctaactcttcatcccttcctaacagccatggtggtgga 397 |||||||||||||||||||| | ||||||||| ||| || |||| |||||| || Sbjct: 1161 gaacttgcacatggtgggagaggtaactcttcctccttt---aacaattctggtggaggg 1105 Query: 398 ggacgccgtggtggtgtctctaggcatacagagtatcg 435 ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 1104 ggacgtcgtgggggtgtatctaggcatacagagtatcg 1067 Score = 46.1 bits (23), Expect = 0.29 Identities = 56/67 (83%) Strand = Plus / Minus Query: 258 agtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaactttg 317 |||| ||||||||||||||||| || ||||| || | || || |||||||| || |||| Sbjct: 1309 agttcgaagatccccgtgatgctgaagatgcaatccgtggacgggatggctataattttg 1250 Query: 318 atgggaa 324 ||||||| Sbjct: 1249 atgggaa 1243
>gb|DQ246114.1| Zea mays clone 19516 mRNA sequence Length = 1121 Score = 111 bits (56), Expect = 6e-21 Identities = 155/188 (82%) Strand = Plus / Plus Query: 134 tacgttgggaacctcccaggggatatcagggagcgggaggtggaggatctgttctacaag 193 ||||| || |||||||| || || ||| | ||| |||| ||||| ||||| ||||||||| Sbjct: 107 tacgtgggcaacctccccggcgacatccgcgagagggaagtggatgatctcttctacaag 166 Query: 194 tatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctttgctttt 253 |||||||| |||||||||||||||||||| | || |||||||| |||| ||||||| Sbjct: 167 tatggacgtatagtggaaattgacttgaaaattccaccaaggcctcctgcttttgcttaa 226 Query: 254 gttgagtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaac 313 ||||||||||| || | |||||||| || ||||| || | ||||| ||||| |||||| Sbjct: 227 gttgagtttgaggacgcacgtgatgctgaagatgcaatatatggccgtgatggatacaac 286 Query: 314 tttgatgg 321 |||||||| Sbjct: 287 tttgatgg 294 Score = 83.8 bits (42), Expect = 1e-12 Identities = 147/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 441 tggttactggactaccttcttctgcatcatggcaagatctaaaggatcatatgagaaagg 500 ||||||||||| |||||| ||| ||||||||||||||||| ||||| |||||| | | Sbjct: 414 tggttactggattacctttttcagcatcatggcaagatctcaaggaccatatgcggcgag 473 Query: 501 ctggtgatgtttg-tttctctgaggtgtatcgtgagggtggtggtactattggaattgtt 559 |||||||||| || |||| |||| |||||||| |||| ||| | ||||||||||| | | Sbjct: 474 ctggtgatgtctgttttcactgatgtgtatcgagaggctggagcaactattggaatagct 533 Query: 560 ga-ttatac-aaactatgatgatatgaagtatgctataaggaagcttgatgatactga 615 || |||||| || |||||| |||||||| | || ||||||||||| |||||| |||| Sbjct: 534 gatttatactaacctatgaagatatgaaacacgcgataaggaagctagatgattctga 591
>emb|CT830792.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI005G09, full insert sequence Length = 795 Score = 111 bits (56), Expect = 6e-21 Identities = 164/200 (82%) Strand = Plus / Plus Query: 410 ggtgtctctaggcatacagagtatcgtgttctggttactggactaccttcttctgcatca 469 ||||| ||||||| | | || ||||| ||| |||| ||||| ||||||| || |||||| Sbjct: 3 ggtgtttctaggcgttctgaatatcgcgttatggtcactggcttaccttcatcggcatca 62 Query: 470 tggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtat 529 ||||| ||||| ||||| |||||| | |||||||||||| || |||||||| || || Sbjct: 63 tggcaggatcttaaggaccatatgcggcgggctggtgatgtctgcttctctgatgtatac 122 Query: 530 cgtgagggtggtggtactattggaattgttgattatacaaactatgatgatatgaagtat 589 ||||||| ||| | || |||||||||| |||||||||| |||||| || ||||||||| Sbjct: 123 cgtgaggctggagcaaccgttggaattgtggattatacaacctatgaagacatgaagtat 182 Query: 590 gctataaggaagcttgatga 609 || || |||||||||||||| Sbjct: 183 gcgattaggaagcttgatga 202
>gb|AY649841.1| Zea mays ASF/SF2-like pre-mRNA splicing factor SRP32 (srp32) gene, complete cds, alternatively spliced Length = 4735 Score = 103 bits (52), Expect = 1e-18 Identities = 82/92 (89%) Strand = Plus / Plus Query: 102 gaaggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggatatca 161 |||||||||| |||||||||||||| || || ||||| ||||||||||| || || ||| Sbjct: 278 gaaggatgagcaggcgctggagccgcacgatctacgtcgggaacctccccggcgacatcc 337 Query: 162 gggagcgggaggtggaggatctgttctacaag 193 ||||| |||||||||||||||||||||||||| Sbjct: 338 gggagagggaggtggaggatctgttctacaag 369 Score = 77.8 bits (39), Expect = 8e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 483 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtggtg 542 ||||||||||| | |||||||||||||||||||||||||| |||||||| || || |||| Sbjct: 1418 aggatcatatgcggaaggctggtgatgtttgtttctctgaagtgtatcgcgaaggcggtg 1477 Query: 543 gta 545 ||| Sbjct: 1478 gta 1480 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 761 cgccgttcagcgtcaagatctcggtcaagatctgtttcttcccattcaaggtcaccgtcg 820 ||||||||| | || ||||| |||||||||||||||||||| | ||||||||| || || Sbjct: 3163 cgccgttcatcatctagatcccggtcaagatctgtttcttctcgttcaaggtccccatca 3222 Query: 821 aagggacgctctccatcaag 840 || ||||| ||||||||||| Sbjct: 3223 aaaggacgttctccatcaag 3242 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 212 attgacttgaaggtccccccaaggccacctggctttgcttttgttgag 259 |||||| |||||||||||||||| |||||||| | ||||||||||||| Sbjct: 771 attgacctgaaggtccccccaagaccacctggttatgcttttgttgag 818 Score = 58.0 bits (29), Expect = 8e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 437 gttctggttactggactaccttcttctgcatcatggcaagatctaaagg 485 ||||| || |||||||| |||||||||||||||||||| ||| |||||| Sbjct: 1292 gttcttgtcactggactgccttcttctgcatcatggcaggatttaaagg 1340 Score = 56.0 bits (28), Expect = 3e-04 Identities = 60/70 (85%), Gaps = 3/70 (4%) Strand = Plus / Plus Query: 887 aatggtgaagcagcaagccccaagaggga---cccaagcaggagcccatcgcgttcccgc 943 ||||||||||||||||||||||||| | | ||||| |||||||||||| | || ||| Sbjct: 4341 aatggtgaagcagcaagccccaagaagcagagcccaaacaggagcccatctggctcacgc 4400 Query: 944 tctcctgatg 953 |||||||||| Sbjct: 4401 tctcctgatg 4410 Score = 48.1 bits (24), Expect = 0.074 Identities = 54/64 (84%) Strand = Plus / Plus Query: 258 agtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaactttg 317 ||||||||||||| |||||||| ||||| || ||| || || ||||| |||||||||| Sbjct: 938 agtttgaagatcctcgtgatgctgaggaggcaattgctggacgggatggatacaactttg 997 Query: 318 atgg 321 |||| Sbjct: 998 atgg 1001 Score = 46.1 bits (23), Expect = 0.29 Identities = 41/47 (87%) Strand = Plus / Plus Query: 551 ggaattgttgattatacaaactatgatgatatgaagtatgctataag 597 |||||||| || || ||||| |||||||||||||| |||||| |||| Sbjct: 2582 ggaattgtggactacacaaattatgatgatatgaaatatgctgtaag 2628
>gb|BT013695.1| Lycopersicon esculentum clone 132536R, mRNA sequence Length = 1929 Score = 97.6 bits (49), Expect = 9e-17 Identities = 142/173 (82%) Strand = Plus / Plus Query: 183 tgttctacaagtatggacggatagtggaaattgacttgaaggtccccccaaggccacctg 242 |||| ||||||||||| | || ||||||||||| ||||| || || || || ||||||| Sbjct: 189 tgttttacaagtatggtcccattgtggaaattgatttgaaagttccacctagaccacctg 248 Query: 243 gctttgcttttgttgagtttgaagatccccgtgatgccgaggatgcgattcagggccgag 302 | | ||| || || |||||||||||||| |||||||| || ||||| |||| || || | Sbjct: 249 gttatgcgttcgtagagtttgaagatcctcgtgatgctgatgatgccattcgtgggcgtg 308 Query: 303 atggctacaactttgatgggaatcgcctgagggttgaacttgcacatggtggg 355 ||||||| ||||||| ||| ||||| || | ||||||||||||||||||||| Sbjct: 309 atggctatgactttgacgggcatcgcttgcgagttgaacttgcacatggtggg 361 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 447 ctggactaccttcttctgcatcatggcaagatctaaaggatcatatg 493 |||||||||| |||||||| ||||||||||| | |||||||||||| Sbjct: 453 ctggactaccgtcttctgcctcatggcaagacttgaaggatcatatg 499
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 91.7 bits (46), Expect = 6e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 104 aggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggatatcagg 163 |||||||| ||||| ||||||||||| || ||||| ||||| ||||| || || |||||| Sbjct: 27669 aggatgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagg 27728 Query: 164 gagcgggaggtggaggatctgttctacaag 193 ||| |||||||||||||||| ||||||||| Sbjct: 27729 gagagggaggtggaggatctcttctacaag 27758 Score = 65.9 bits (33), Expect = 3e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 437 gttctggttactggactaccttcttctgcatcatggcaagatctaaagg 485 |||||||||||||| | |||||||||||||||||||||||| |||||| Sbjct: 28705 gttctggttactggtttgccttcttctgcatcatggcaagatttaaagg 28753 Score = 63.9 bits (32), Expect = 1e-06 Identities = 61/70 (87%), Gaps = 3/70 (4%) Strand = Plus / Plus Query: 887 aatggtgaagcagcaagccccaaga---gggacccaagcaggagcccatcgcgttcccgc 943 |||||||||||| |||||||||||| || |||||||||||||||||| ||||| || Sbjct: 31508 aatggtgaagcatcaagccccaagaaacggagcccaagcaggagcccatctcgttcacgg 31567 Query: 944 tctcctgatg 953 |||||||||| Sbjct: 31568 tctcctgatg 31577 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 483 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgaggg 537 |||| |||||| | ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 28847 aggaccatatgcgcaaggctggtgatgtttgtttctcagaagtgtatcgcgaggg 28901 Score = 56.0 bits (28), Expect = 3e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 777 gatctcggtcaagatctgtttcttcccattcaaggtcaccgtcgaagggacgctctccat 836 ||||||| ||||| ||||||||||||| |||| ||||| | || || || |||||||||| Sbjct: 30249 gatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccat 30308 Query: 837 caag 840 |||| Sbjct: 30309 caag 30312 Score = 48.1 bits (24), Expect = 0.074 Identities = 39/44 (88%) Strand = Plus / Plus Query: 212 attgacttgaaggtccccccaaggccacctggctttgcttttgt 255 |||||||||||| |||| || |||||||| |||| ||||||||| Sbjct: 28187 attgacttgaagatccctccgaggccaccaggctatgcttttgt 28230 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 tggtggtggaggacgccgtggtg 410 ||||||||||||||||||||||| Sbjct: 28569 tggtggtggaggacgccgtggtg 28591
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 91.7 bits (46), Expect = 6e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 104 aggatgagtaggcgctggagccggaccatttacgttgggaacctcccaggggatatcagg 163 |||||||| ||||| ||||||||||| || ||||| ||||| ||||| || || |||||| Sbjct: 12786216 aggatgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagg 12786275 Query: 164 gagcgggaggtggaggatctgttctacaag 193 ||| |||||||||||||||| ||||||||| Sbjct: 12786276 gagagggaggtggaggatctcttctacaag 12786305 Score = 65.9 bits (33), Expect = 3e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 437 gttctggttactggactaccttcttctgcatcatggcaagatctaaagg 485 |||||||||||||| | |||||||||||||||||||||||| |||||| Sbjct: 12787252 gttctggttactggtttgccttcttctgcatcatggcaagatttaaagg 12787300 Score = 63.9 bits (32), Expect = 1e-06 Identities = 61/70 (87%), Gaps = 3/70 (4%) Strand = Plus / Plus Query: 887 aatggtgaagcagcaagccccaaga---gggacccaagcaggagcccatcgcgttcccgc 943 |||||||||||| |||||||||||| || |||||||||||||||||| ||||| || Sbjct: 12790055 aatggtgaagcatcaagccccaagaaacggagcccaagcaggagcccatctcgttcacgg 12790114 Query: 944 tctcctgatg 953 |||||||||| Sbjct: 12790115 tctcctgatg 12790124 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 483 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgaggg 537 |||| |||||| | ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 12787394 aggaccatatgcgcaaggctggtgatgtttgtttctcagaagtgtatcgcgaggg 12787448 Score = 56.0 bits (28), Expect = 3e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 777 gatctcggtcaagatctgtttcttcccattcaaggtcaccgtcgaagggacgctctccat 836 ||||||| ||||| ||||||||||||| |||| ||||| | || || || |||||||||| Sbjct: 12788796 gatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccat 12788855 Query: 837 caag 840 |||| Sbjct: 12788856 caag 12788859 Score = 48.1 bits (24), Expect = 0.074 Identities = 39/44 (88%) Strand = Plus / Plus Query: 212 attgacttgaaggtccccccaaggccacctggctttgcttttgt 255 |||||||||||| |||| || |||||||| |||| ||||||||| Sbjct: 12786734 attgacttgaagatccctccgaggccaccaggctatgcttttgt 12786777 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 tggtggtggaggacgccgtggtg 410 ||||||||||||||||||||||| Sbjct: 12787116 tggtggtggaggacgccgtggtg 12787138
>gb|DQ019630.1| Triticum aestivum alternative splicing regulator (SRp30) mRNA, complete cds Length = 1055 Score = 87.7 bits (44), Expect = 9e-14 Identities = 137/168 (81%) Strand = Plus / Plus Query: 443 gttactggactaccttcttctgcatcatggcaagatctaaaggatcatatgagaaaggct 502 ||||| ||| |||||||||| ||||||||||||||||| |||||||||||| | ||| Sbjct: 350 gttaccggattaccttcttcagcatcatggcaagatctcaaggatcatatgcggcgagct 409 Query: 503 ggtgatgtttgtttctctgaggtgtatcgtgagggtggtggtactattggaattgttgat 562 |||||||| ||||||||||| || |||| || || ||| | | || |||||| ||||| Sbjct: 410 ggtgatgtctgtttctctgatgtttatcctggggctggagcaattactggaatagttgag 469 Query: 563 tatacaaactatgatgatatgaagtatgctataaggaagcttgatgat 610 | | | ||||| || || ||||| |||| |||||||||||||||||| Sbjct: 470 tttcccaactacgaagacatgaaacatgcgataaggaagcttgatgat 517 Score = 63.9 bits (32), Expect = 1e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 230 ccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 |||||||| |||| | ||||||||| ||||||||||| || |||||||| || ||||| Sbjct: 140 ccaaggcctcctgtttatgcttttgtcgagtttgaagacccacgtgatgctgatgatgca 199 Query: 290 attcagggccgagatggctacaactttgatgg 321 ||| | ||||| ||||| ||| |||||||||| Sbjct: 200 atttatggccgtgatggatacgactttgatgg 231
>ref|NM_180603.1| Arabidopsis thaliana SR1; RNA binding / nucleic acid binding (SR1) mRNA, complete cds Length = 1555 Score = 81.8 bits (41), Expect = 5e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 210 aaattgacttgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatc 269 ||||||| |||||||| || |||||||| ||||| | ||| || ||||||||||| ||| Sbjct: 158 aaattgatttgaaggttcctccaaggcctcctggttatgcattcgttgagtttgatgatg 217 Query: 270 cccgtgatgccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcc 329 | || ||||| || ||||| ||||| || || |||||||| ||||||||||| |||| Sbjct: 218 ctcgggatgctgaagatgctattcatggtcgtgatggctatgactttgatgggcatcgtt 277 Query: 330 tgagggttgaacttgcacatggtgggagg 358 ||||||| ||| | || |||||||||||| Sbjct: 278 tgagggtggaattggcgcatggtgggagg 306
>ref|NM_100165.3| Arabidopsis thaliana SR1; RNA binding / nucleic acid binding (SR1) mRNA, complete cds Length = 1237 Score = 81.8 bits (41), Expect = 5e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 210 aaattgacttgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatc 269 ||||||| |||||||| || |||||||| ||||| | ||| || ||||||||||| ||| Sbjct: 193 aaattgatttgaaggttcctccaaggcctcctggttatgcattcgttgagtttgatgatg 252 Query: 270 cccgtgatgccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcc 329 | || ||||| || ||||| ||||| || || |||||||| ||||||||||| |||| Sbjct: 253 ctcgggatgctgaagatgctattcatggtcgtgatggctatgactttgatgggcatcgtt 312 Query: 330 tgagggttgaacttgcacatggtgggagg 358 ||||||| ||| | || |||||||||||| Sbjct: 313 tgagggtggaattggcgcatggtgggagg 341
>ref|NM_180602.1| Arabidopsis thaliana SR1; RNA binding / nucleic acid binding (SR1) mRNA, complete cds Length = 1241 Score = 81.8 bits (41), Expect = 5e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 210 aaattgacttgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatc 269 ||||||| |||||||| || |||||||| ||||| | ||| || ||||||||||| ||| Sbjct: 197 aaattgatttgaaggttcctccaaggcctcctggttatgcattcgttgagtttgatgatg 256 Query: 270 cccgtgatgccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcc 329 | || ||||| || ||||| ||||| || || |||||||| ||||||||||| |||| Sbjct: 257 ctcgggatgctgaagatgctattcatggtcgtgatggctatgactttgatgggcatcgtt 316 Query: 330 tgagggttgaacttgcacatggtgggagg 358 ||||||| ||| | || |||||||||||| Sbjct: 317 tgagggtggaattggcgcatggtgggagg 345
>gb|AY128338.1| Arabidopsis thaliana SF2/ASF-like splicing modulator Srp30, putative (At1g02840) mRNA, complete cds Length = 1540 Score = 81.8 bits (41), Expect = 5e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 210 aaattgacttgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatc 269 ||||||| |||||||| || |||||||| ||||| | ||| || ||||||||||| ||| Sbjct: 152 aaattgatttgaaggttcctccaaggcctcctggttatgcattcgttgagtttgatgatg 211 Query: 270 cccgtgatgccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcc 329 | || ||||| || ||||| ||||| || || |||||||| ||||||||||| |||| Sbjct: 212 ctcgggatgctgaagatgctattcatggtcgtgatggctatgactttgatgggcatcgtt 271 Query: 330 tgagggttgaacttgcacatggtgggagg 358 ||||||| ||| | || |||||||||||| Sbjct: 272 tgagggtggaattggcgcatggtgggagg 300
>gb|BT006316.1| Arabidopsis thaliana At1g02840 mRNA, complete cds Length = 858 Score = 81.8 bits (41), Expect = 5e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 210 aaattgacttgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatc 269 ||||||| |||||||| || |||||||| ||||| | ||| || ||||||||||| ||| Sbjct: 104 aaattgatttgaaggttcctccaaggcctcctggttatgcattcgttgagtttgatgatg 163 Query: 270 cccgtgatgccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcc 329 | || ||||| || ||||| ||||| || || |||||||| ||||||||||| |||| Sbjct: 164 ctcgggatgctgaagatgctattcatggtcgtgatggctatgactttgatgggcatcgtt 223 Query: 330 tgagggttgaacttgcacatggtgggagg 358 ||||||| ||| | || |||||||||||| Sbjct: 224 tgagggtggaattggcgcatggtgggagg 252
>gb|AY085920.1| Arabidopsis thaliana clone 19681 mRNA, complete sequence Length = 1232 Score = 81.8 bits (41), Expect = 5e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 210 aaattgacttgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatc 269 ||||||| |||||||| || |||||||| ||||| | ||| || ||||||||||| ||| Sbjct: 197 aaattgatttgaaggttcctccaaggcctcctggttatgcattcgttgagtttgatgatg 256 Query: 270 cccgtgatgccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcc 329 | || ||||| || ||||| ||||| || || |||||||| ||||||||||| |||| Sbjct: 257 ctcgggatgctgaagatgctattcatggtcgtgatggctatgactttgatgggcatcgtt 316 Query: 330 tgagggttgaacttgcacatggtgggagg 358 ||||||| ||| | || |||||||||||| Sbjct: 317 tgagggtggaattggcgcatggtgggagg 345
>dbj|AK118379.1| Arabidopsis thaliana At1g02840 mRNA for putative ribonucleoprotein SF-2, complete cds, clone: RAFL19-64-H16 Length = 1229 Score = 81.8 bits (41), Expect = 5e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 210 aaattgacttgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatc 269 ||||||| |||||||| || |||||||| ||||| | ||| || ||||||||||| ||| Sbjct: 196 aaattgatttgaaggttcctccaaggcctcctggttatgcattcgttgagtttgatgatg 255 Query: 270 cccgtgatgccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcc 329 | || ||||| || ||||| ||||| || || |||||||| ||||||||||| |||| Sbjct: 256 ctcgggatgctgaagatgctattcatggtcgtgatggctatgactttgatgggcatcgtt 315 Query: 330 tgagggttgaacttgcacatggtgggagg 358 ||||||| ||| | || |||||||||||| Sbjct: 316 tgagggtggaattggcgcatggtgggagg 344
>gb|M98340.1|ATHRIBNUCP Arabidopis thaliana ribonucleoprotein mRNA, complete cds Length = 1160 Score = 81.8 bits (41), Expect = 5e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 210 aaattgacttgaaggtccccccaaggccacctggctttgcttttgttgagtttgaagatc 269 ||||||| |||||||| || |||||||| ||||| | ||| || ||||||||||| ||| Sbjct: 134 aaattgatttgaaggttcctccaaggcctcctggttatgcattcgttgagtttgatgatg 193 Query: 270 cccgtgatgccgaggatgcgattcagggccgagatggctacaactttgatgggaatcgcc 329 | || ||||| || ||||| ||||| || || |||||||| ||||||||||| |||| Sbjct: 194 ctcgggatgctgaagatgctattcatggtcgtgatggctatgactttgatgggcatcgtt 253 Query: 330 tgagggttgaacttgcacatggtgggagg 358 ||||||| ||| | || |||||||||||| Sbjct: 254 tgagggtggaattggcgcatggtgggagg 282
>gb|AY649843.1| Zea mays ASF/SF2-like pre-mRNA splicing factor SRP31 (srp31) gene, complete cds, alternatively spliced Length = 4271 Score = 79.8 bits (40), Expect = 2e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 192 agtatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctttgctt 251 |||||||||| |||||||||||||||||||| | || |||||||| ||||| ||||||| Sbjct: 1013 agtatggacgtatagtggaaattgacttgaaaattccaccaaggcctcctggttttgctt 1072 Query: 252 ttgttgag 259 |||||||| Sbjct: 1073 ttgttgag 1080 Score = 65.9 bits (33), Expect = 3e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 441 tggttactggactaccttcttctgcatcatggcaagatctaaagg 485 ||||||||||| |||||||||| ||||||||||||||||| |||| Sbjct: 1802 tggttactggattaccttcttcagcatcatggcaagatctcaagg 1846 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 500 gctggtgatgtttgtttctctgaggtgtatcgtgagg 536 ||||||||||| |||||| |||| ||||||||||||| Sbjct: 1932 gctggtgatgtctgtttcactgatgtgtatcgtgagg 1968 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 545 actattggaattgttgattatacaaactatgatgatatgaa 585 ||||||||||| | ||||||||| |||||||| |||||||| Sbjct: 2126 actattggaatagctgattatactaactatgaagatatgaa 2166
>ref|NM_100783.3| Arabidopsis thaliana ATSRP30.1; RNA binding (ATSRP30.1) mRNA, complete cds Length = 1144 Score = 73.8 bits (37), Expect = 1e-09 Identities = 148/185 (80%) Strand = Plus / Plus Query: 170 gaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaaggtcccc 229 ||||| || ||||| |||||||||||||||| || ||||| ||||| |||||| | || Sbjct: 185 gaggttgaagatctcttctacaagtatggaccaattgtggacattgatttgaagattcca 244 Query: 230 ccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 || || || ||||| | ||| ||||| |||||||||||||| |||||||| || ||||| Sbjct: 245 ccgagacctcctggttatgcctttgtcgagtttgaagatcctcgtgatgcagacgatgca 304 Query: 290 attcagggccgagatggctacaactttgatgggaatcgcctgagggttgaacttgcacat 349 ||| | || || ||||| || | ||||||||| ||| || ||||||| |||||||| Sbjct: 305 atttatggacgtgatggttatgattttgatgggtgtcgacttcgggttgagattgcacat 364 Query: 350 ggtgg 354 ||||| Sbjct: 365 ggtgg 369 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 555 ttgttgattatacaaactatgatgatatgaagtatgctataaggaagcttgatgatactg 614 |||| ||||||| |||||||||||||||||||| || |||||||| ||||||| |||| Sbjct: 570 ttgtggattatagcaactatgatgatatgaagtacgcaataaggaaacttgatgccactg 629 Query: 615 aatttaaaaatgccttctct 634 ||||| |||||| |||||| Sbjct: 630 aatttcgaaatgctttctct 649
>ref|NM_148447.2| Arabidopsis thaliana ATSRP30.1; RNA binding (ATSRP30.1) mRNA, complete cds Length = 1609 Score = 73.8 bits (37), Expect = 1e-09 Identities = 148/185 (80%) Strand = Plus / Plus Query: 170 gaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaaggtcccc 229 ||||| || ||||| |||||||||||||||| || ||||| ||||| |||||| | || Sbjct: 205 gaggttgaagatctcttctacaagtatggaccaattgtggacattgatttgaagattcca 264 Query: 230 ccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 || || || ||||| | ||| ||||| |||||||||||||| |||||||| || ||||| Sbjct: 265 ccgagacctcctggttatgcctttgtcgagtttgaagatcctcgtgatgcagacgatgca 324 Query: 290 attcagggccgagatggctacaactttgatgggaatcgcctgagggttgaacttgcacat 349 ||| | || || ||||| || | ||||||||| ||| || ||||||| |||||||| Sbjct: 325 atttatggacgtgatggttatgattttgatgggtgtcgacttcgggttgagattgcacat 384 Query: 350 ggtgg 354 ||||| Sbjct: 385 ggtgg 389 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 555 ttgttgattatacaaactatgatgatatgaagtatgctataaggaagcttgatgatactg 614 |||| ||||||| |||||||||||||||||||| || |||||||| ||||||| |||| Sbjct: 590 ttgtggattatagcaactatgatgatatgaagtacgcaataaggaaacttgatgccactg 649 Query: 615 aatttaaaaatgccttctct 634 ||||| |||||| |||||| Sbjct: 650 aatttcgaaatgctttctct 669
>gb|AY150486.1| Arabidopsis thaliana putative SF2/ASF splicing modulator Srp30 (At1g09140) mRNA, complete cds Length = 838 Score = 73.8 bits (37), Expect = 1e-09 Identities = 148/185 (80%) Strand = Plus / Plus Query: 170 gaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaaggtcccc 229 ||||| || ||||| |||||||||||||||| || ||||| ||||| |||||| | || Sbjct: 64 gaggttgaagatctcttctacaagtatggaccaattgtggacattgatttgaagattcca 123 Query: 230 ccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 || || || ||||| | ||| ||||| |||||||||||||| |||||||| || ||||| Sbjct: 124 ccgagacctcctggttatgcctttgtcgagtttgaagatcctcgtgatgcagacgatgca 183 Query: 290 attcagggccgagatggctacaactttgatgggaatcgcctgagggttgaacttgcacat 349 ||| | || || ||||| || | ||||||||| ||| || ||||||| |||||||| Sbjct: 184 atttatggacgtgatggttatgattttgatgggtgtcgacttcgggttgagattgcacat 243 Query: 350 ggtgg 354 ||||| Sbjct: 244 ggtgg 248 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 555 ttgttgattatacaaactatgatgatatgaagtatgctataaggaagcttgatgatactg 614 |||| ||||||| |||||||||||||||||||| || |||||||| ||||||| |||| Sbjct: 449 ttgtggattatagcaactatgatgatatgaagtacgcaataaggaaacttgatgccactg 508 Query: 615 aatttaaaaatgccttctct 634 ||||| |||||| |||||| Sbjct: 509 aatttcgaaatgctttctct 528
>emb|BX816682.1|CNS0AD6Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1417 Score = 73.8 bits (37), Expect = 1e-09 Identities = 148/185 (80%) Strand = Plus / Plus Query: 170 gaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaaggtcccc 229 ||||| || ||||| |||||||||||||||| || ||||| ||||| |||||| | || Sbjct: 92 gaggttgaagatctcttctacaagtatggaccaattgtggacattgatttgaagattcca 151 Query: 230 ccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 || || || ||||| | ||| ||||| |||||||||||||| |||||||| || ||||| Sbjct: 152 ccgagacctcctggttatgcctttgtcgagtttgaagatcctcgtgatgcagacgatgca 211 Query: 290 attcagggccgagatggctacaactttgatgggaatcgcctgagggttgaacttgcacat 349 ||| | || || ||||| || | ||||||||| ||| || ||||||| |||||||| Sbjct: 212 atttatggacgtgatggttatgattttgatgggtgtcgacttcgggttgagattgcacat 271 Query: 350 ggtgg 354 ||||| Sbjct: 272 ggtgg 276 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 555 ttgttgattatacaaactatgatgatatgaagtatgctataaggaagcttgatgatactg 614 |||| ||||||| |||||||||||||||||||| || |||||||| ||||||| |||| Sbjct: 477 ttgtggattatagcaactatgatgatatgaagtacgcaataaggaaacttgatgccactg 536 Query: 615 aatttaaaaatgccttctct 634 ||||| |||||| |||||| Sbjct: 537 aatttcgaaatgctttctct 556
>emb|BX815693.1|CNS0AAVQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS84ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1505 Score = 73.8 bits (37), Expect = 1e-09 Identities = 148/185 (80%) Strand = Plus / Plus Query: 170 gaggtggaggatctgttctacaagtatggacggatagtggaaattgacttgaaggtcccc 229 ||||| || ||||| |||||||||||||||| || ||||| ||||| |||||| | || Sbjct: 177 gaggttgaagatctcttctacaagtatggaccaattgtggacattgatttgaagattcca 236 Query: 230 ccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 || || || ||||| | ||| ||||| |||||||||||||| |||||||| || ||||| Sbjct: 237 ccgagacctcctggttatgcctttgtcgagtttgaagatcctcgtgatgcagacgatgca 296 Query: 290 attcagggccgagatggctacaactttgatgggaatcgcctgagggttgaacttgcacat 349 ||| | || || ||||| || | ||||||||| ||| || ||||||| |||||||| Sbjct: 297 atttatggacgtgatggttatgattttgatgggtgtcgacttcgggttgagattgcacat 356 Query: 350 ggtgg 354 ||||| Sbjct: 357 ggtgg 361 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 555 ttgttgattatacaaactatgatgatatgaagtatgctataaggaagcttgatgatactg 614 |||| ||||||| |||||||||||||||||||| || |||||||| ||||||| |||| Sbjct: 562 ttgtggattatagcaactatgatgatatgaagtacgcaataaggaaacttgatgccactg 621 Query: 615 aatttaaaaatgccttctct 634 ||||| |||||| |||||| Sbjct: 622 aatttcgaaatgctttctct 641
>gb|AY050912.1| Arabidopsis thaliana putative SF2/ASF splicing modulator Srp30 protein (At1g09140) mRNA, partial cds Length = 933 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 555 ttgttgattatacaaactatgatgatatgaagtatgctataaggaagcttgatgatactg 614 |||| ||||||| |||||||||||||||||||| || |||||||| ||||||| |||| Sbjct: 268 ttgtggattatagcaactatgatgatatgaagtacgcaataaggaaacttgatgccactg 327 Query: 615 aatttaaaaatgccttctct 634 ||||| |||||| |||||| Sbjct: 328 aatttcgaaatgctttctct 347
>gb|BT013343.1| Lycopersicon esculentum clone 135171R, mRNA sequence Length = 1677 Score = 69.9 bits (35), Expect = 2e-08 Identities = 116/143 (81%) Strand = Plus / Plus Query: 230 ccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 ||||| || ||||| | ||||||||||||||||||||| | |||||||| || ||||| Sbjct: 140 ccaagaccccctggttatgcttttgttgagtttgaagaggctcgtgatgctgaagatgct 199 Query: 290 attcagggccgagatggctacaactttgatgggaatcgcctgagggttgaacttgcacat 349 |||| || || |||||||| | ||||||||| | || ||| ||||||| ||||||||| Sbjct: 200 attcgtggtcgtgatggctatgattttgatgggcaccgtctgcgggttgagcttgcacat 259 Query: 350 ggtgggagggctaactcttcatc 372 || ||| | | |||||| ||||| Sbjct: 260 ggcgggcgtggtaactcatcatc 282 Score = 69.9 bits (35), Expect = 2e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 558 ttgattatacaaactatgatgatatgaagtatgctataaggaagcttgatgatactgaat 617 |||||||||||||||||||||| ||||| |||||||| | ||||||||||| |||| | Sbjct: 480 ttgattatacaaactatgatgacatgaaatatgctatcaaaaagcttgatgactctgagt 539 Query: 618 ttaaaaatgccttctctcg 636 || ||||||||| ||||| Sbjct: 540 ttcgaaatgccttttctcg 558
>gb|BT012710.1| Lycopersicon esculentum clone 113590R, mRNA sequence Length = 1107 Score = 69.9 bits (35), Expect = 2e-08 Identities = 116/143 (81%) Strand = Plus / Plus Query: 230 ccaaggccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 ||||| || ||||| | ||||||||||||||||||||| | |||||||| || ||||| Sbjct: 177 ccaagaccccctggttatgcttttgttgagtttgaagaggctcgtgatgctgaagatgct 236 Query: 290 attcagggccgagatggctacaactttgatgggaatcgcctgagggttgaacttgcacat 349 |||| || || |||||||| | ||||||||| | || ||| ||||||| ||||||||| Sbjct: 237 attcgtggtcgtgatggctatgattttgatgggcaccgtctgcgggttgagcttgcacat 296 Query: 350 ggtgggagggctaactcttcatc 372 || ||| | | |||||| ||||| Sbjct: 297 ggcgggcgtggtaactcatcatc 319 Score = 69.9 bits (35), Expect = 2e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 558 ttgattatacaaactatgatgatatgaagtatgctataaggaagcttgatgatactgaat 617 |||||||||||||||||||||| ||||| |||||||| | ||||||||||| |||| | Sbjct: 517 ttgattatacaaactatgatgacatgaaatatgctatcaaaaagcttgatgactctgagt 576 Query: 618 ttaaaaatgccttctctcg 636 || ||||||||| ||||| Sbjct: 577 ttcgaaatgccttttctcg 595
>dbj|AK239497.1| Sus scrofa mRNA, clone:THY010108A04, expressed in thymus Length = 1455 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 cctggctttgcttttgttgaatttgaagatccccgagatgc 298
>ref|NM_114803.3| Arabidopsis thaliana RNA binding / nucleic acid binding (AT3G49430) mRNA, complete cds Length = 1097 Score = 65.9 bits (33), Expect = 3e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 461 tctgcatcatggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtttctct 520 ||||| |||||||||||| | |||||||||||| | || ||||||||||| || || || Sbjct: 466 tctgcttcatggcaagatttgaaggatcatatgcggaaagctggtgatgtgtgctttgct 525 Query: 521 gaggtgtatcgtgagggtggtggtactattggaattgttgattatacaaactatgatgat 580 |||||| ||| || ||| ||| ||| ||| |||| || || || || |||||||| Sbjct: 526 gaggtgactcgagacagtgatggaacttatggtgttgtcgactacaccaattatgatgac 585 Query: 581 atgaagtatgctataaggaagcttgatga 609 ||||||||||| |||||||| |||||||| Sbjct: 586 atgaagtatgcaataaggaaacttgatga 614 Score = 56.0 bits (28), Expect = 3e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 251 tttgttgagtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctac 310 |||||||||||||| || | || ||||| || ||||| || ||||||| |||||||| Sbjct: 217 tttgttgagtttgagcattctcgggatgctgaagatgccatcaagggccgtgatggctat 276 Query: 311 aactttgatgggaatcgcctgagggttgaacttgcacatggtgg 354 || || ||||| |||| |||||||||| |||||||||||||| Sbjct: 277 aatttggatggctgtcgcttgagggttgagcttgcacatggtgg 320
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02, complete sequence Length = 146435 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 545 actattggaattgttgattatacaaactatgatgatatgaa 585 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 52216 actattggaattgttgattataccaactatgaggatatgaa 52256 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Plus Query: 483 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtgg 540 ||||||||||||| ||||||||||| ||||||||||| || || ||||||||||| Sbjct: 51988 aggatcatatgaggcgagctggtgatgtctgtttctctgatgtttaccgtgagggtgg 52045 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 tggttactggactaccttcttctgcatcatggcaaga 477 ||||||||||| ||||||| || |||||||||||||| Sbjct: 51875 tggttactggattaccttcgtcagcatcatggcaaga 51911 Score = 48.1 bits (24), Expect = 0.074 Identities = 57/68 (83%) Strand = Plus / Plus Query: 192 agtatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctttgctt 251 ||||||| || || ||||| ||||||||||| | || |||||||| ||||| | ||||| Sbjct: 49938 agtatggccgtattgtggatattgacttgaaaattcctccaaggcctcctggttatgctt 49997 Query: 252 ttgttgag 259 |||||||| Sbjct: 49998 ttgttgag 50005
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10, complete sequence Length = 159672 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 545 actattggaattgttgattatacaaactatgatgatatgaa 585 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 103475 actattggaattgttgattataccaactatgaggatatgaa 103515 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Plus Query: 483 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtgg 540 ||||||||||||| ||||||||||| ||||||||||| || || ||||||||||| Sbjct: 103247 aggatcatatgaggcgagctggtgatgtctgtttctctgatgtttaccgtgagggtgg 103304 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 tggttactggactaccttcttctgcatcatggcaaga 477 ||||||||||| ||||||| || |||||||||||||| Sbjct: 103134 tggttactggattaccttcgtcagcatcatggcaaga 103170 Score = 48.1 bits (24), Expect = 0.074 Identities = 57/68 (83%) Strand = Plus / Plus Query: 192 agtatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctttgctt 251 ||||||| || || ||||| ||||||||||| | || |||||||| ||||| | ||||| Sbjct: 101197 agtatggccgtattgtggatattgacttgaaaattcctccaaggcctcctggttatgctt 101256 Query: 252 ttgttgag 259 |||||||| Sbjct: 101257 ttgttgag 101264
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 545 actattggaattgttgattatacaaactatgatgatatgaa 585 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 17306163 actattggaattgttgattataccaactatgaggatatgaa 17306203 Score = 52.0 bits (26), Expect = 0.005 Identities = 50/58 (86%) Strand = Plus / Plus Query: 483 aggatcatatgagaaaggctggtgatgtttgtttctctgaggtgtatcgtgagggtgg 540 ||||||||||||| ||||||||||| ||||||||||| || || ||||||||||| Sbjct: 17305935 aggatcatatgaggcgagctggtgatgtctgtttctctgatgtttaccgtgagggtgg 17305992 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 tggttactggactaccttcttctgcatcatggcaaga 477 ||||||||||| ||||||| || |||||||||||||| Sbjct: 17305822 tggttactggattaccttcgtcagcatcatggcaaga 17305858 Score = 48.1 bits (24), Expect = 0.074 Identities = 57/68 (83%) Strand = Plus / Plus Query: 192 agtatggacggatagtggaaattgacttgaaggtccccccaaggccacctggctttgctt 251 ||||||| || || ||||| ||||||||||| | || |||||||| ||||| | ||||| Sbjct: 17303885 agtatggccgtattgtggatattgacttgaaaattcctccaaggcctcctggttatgctt 17303944 Query: 252 ttgttgag 259 |||||||| Sbjct: 17303945 ttgttgag 17303952
>gb|AC109815.5| Homo sapiens BAC clone CTD-2192H8 from 2, complete sequence Length = 165158 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 137862 cctggctttgcttttgttgaatttgaagatccccgagatgc 137822
>gb|AC011753.6| Homo sapiens BAC clone RP11-537E18 from 2, complete sequence Length = 192802 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 187926 cctggctttgcttttgttgaatttgaagatccccgagatgc 187966
>emb|BX822083.1|CNS0A60D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1094 Score = 65.9 bits (33), Expect = 3e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 461 tctgcatcatggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtttctct 520 ||||| |||||||||||| | |||||||||||| | || ||||||||||| || || || Sbjct: 466 tctgcttcatggcaagatttgaaggatcatatgcggaaagctggtgatgtgtgctttgct 525 Query: 521 gaggtgtatcgtgagggtggtggtactattggaattgttgattatacaaactatgatgat 580 |||||| ||| || ||| ||| ||| ||| |||| || || || || |||||||| Sbjct: 526 gaggtgactcgagacagtgatggaacttatggtgttgtcgactacaccaattatgatgac 585 Query: 581 atgaagtatgctataaggaagcttgatga 609 ||||||||||| |||||||| |||||||| Sbjct: 586 atgaagtatgcaataaggaaacttgatga 614 Score = 56.0 bits (28), Expect = 3e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 251 tttgttgagtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctac 310 |||||||||||||| || | || ||||| || ||||| || ||||||| |||||||| Sbjct: 217 tttgttgagtttgagcattctcgggatgctgaagatgccatcaagggccgtgatggctat 276 Query: 311 aactttgatgggaatcgcctgagggttgaacttgcacatggtgg 354 || || ||||| |||| |||||||||| |||||||||||||| Sbjct: 277 aatttggatggctgtcgcttgagggttgagcttgcacatggtgg 320
>ref|XR_022443.1| PREDICTED: Pan troglodytes hypothetical protein LOC748894 (LOC748894), mRNA Length = 1433 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 240 ctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||||||||||| |||||||||||||| ||||| Sbjct: 137 ctggctttgcttttgttgaatttgaagatccccgagatgc 176
>ref|XM_001173207.1| PREDICTED: Pan troglodytes similar to MGC89287 protein, transcript variant 4 (LOC747921), mRNA Length = 4344 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 944 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 987
>ref|XM_001173177.1| PREDICTED: Pan troglodytes similar to MGC89287 protein, transcript variant 1 (LOC747921), mRNA Length = 3474 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 284 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 327
>ref|XM_001173191.1| PREDICTED: Pan troglodytes similar to MGC89287 protein, transcript variant 3 (LOC747921), mRNA Length = 3685 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 438 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 481
>ref|XM_001173216.1| PREDICTED: Pan troglodytes similar to MGC89287 protein, transcript variant 5 (LOC747921), mRNA Length = 4191 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 944 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 987
>ref|XM_001173185.1| PREDICTED: Pan troglodytes similar to MGC89287 protein, transcript variant 2 (LOC747921), mRNA Length = 3830 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 583 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 626
>ref|XM_001112817.1| PREDICTED: Macaca mulatta similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing factor SRP20) (X16 protein) (LOC719123), mRNA Length = 2482 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 517 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 560
>gb|BC051276.1| Homo sapiens mRNA similar to splicing factor, arginine/serine-rich 3 (cDNA clone IMAGE:6249759) Length = 2318 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 1178 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 1221
>gb|BC000914.1| Homo sapiens splicing factor, arginine/serine-rich 3, mRNA (cDNA clone MGC:5205 IMAGE:3049167), complete cds Length = 1403 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 238 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 281
>gb|BT007726.1| Synthetic construct Homo sapiens splicing factor, arginine/serine-rich 3 mRNA, partial cds Length = 495 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 133 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 176
>gb|BT007017.1| Homo sapiens splicing factor, arginine/serine-rich 3 mRNA, complete cds Length = 495 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 133 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 176
>gb|BC069018.1| Homo sapiens splicing factor, arginine/serine-rich 3, mRNA (cDNA clone MGC:78599 IMAGE:3507371), complete cds Length = 1568 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 234 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 277
>emb|Z85986.1|HS108K11 Human DNA sequence from clone RP1-108K11 on chromosome 6p21 Contains the SFRS3 for splicing factor arginine/serine-rich (SRP20), the STK38 gene for serine/threonine protein kinase (NDR), the 3' end of a gene for a novel protein (2410004NRIK) and a CpG island, complete sequence Length = 145616 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 26444 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 26401
>emb|CR624897.1| full-length cDNA clone CL0BB019ZF07 of Neuroblastoma of Homo sapiens (human) Length = 1566 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 301
>emb|CR621558.1| full-length cDNA clone CS0DM008YG16 of Fetal liver of Homo sapiens (human) Length = 1548 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 301
>emb|CR624175.1| full-length cDNA clone CS0DM002YE08 of Fetal liver of Homo sapiens (human) Length = 886 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 226 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 269
>emb|CR622471.1| full-length cDNA clone CS0DI085YL20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1512 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 238 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 281
>emb|CR622370.1| full-length cDNA clone CS0DJ010YP13 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1380 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 238 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 281
>emb|CR621528.1| full-length cDNA clone CS0DI081YL02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1538 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 301
>emb|CR599518.1| full-length cDNA clone CS0DA003YF09 of Neuroblastoma of Homo sapiens (human) Length = 1368 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 301
>emb|CR617752.1| full-length cDNA clone CL0BB003ZG07 of Neuroblastoma of Homo sapiens (human) Length = 1386 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 222 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 265
>emb|CR617139.1| full-length cDNA clone CS0DH005YL05 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1382 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 234 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 277
>emb|CR613674.1| full-length cDNA clone CS0DI041YM08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1482 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 226 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 269
>emb|CR612662.1| full-length cDNA clone CL0BB026ZE07 of Neuroblastoma of Homo sapiens (human) Length = 1389 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 238 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 281
>emb|CR612246.1| full-length cDNA clone CS0DH005YG20 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1381 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 301
>emb|CR611557.1| full-length cDNA clone CS0DI053YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1989 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 301
>emb|CR608185.1| full-length cDNA clone CS0CAP001YK24 of Thymus of Homo sapiens (human) Length = 1336 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 222 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 265
>emb|CR599324.1| full-length cDNA clone CS0DI006YI16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1538 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 301
>emb|CR601962.1| full-length cDNA clone CS0DG003YC16 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1358 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 301
>emb|CR595256.1| full-length cDNA clone CS0DE011YO18 of Placenta of Homo sapiens (human) Length = 1538 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 258 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 301
>gb|AY891770.1| Synthetic construct Homo sapiens clone FLH023810.01L splicing factor arginine/serine-rich 3 (SFRS3) mRNA, partial cds Length = 495 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 133 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 176
>gb|AY891769.1| Synthetic construct Homo sapiens clone FLH023809.01L splicing factor arginine/serine-rich 3 (SFRS3) mRNA, partial cds Length = 495 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 133 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 176
>gb|AY889278.1| Synthetic construct Homo sapiens clone FLH023814.01X splicing factor arginine/serine-rich 3 (SFRS3) mRNA, complete cds Length = 495 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 133 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 176
>gb|AY889277.1| Synthetic construct Homo sapiens clone FLH023813.01X splicing factor arginine/serine-rich 3 (SFRS3) mRNA, complete cds Length = 495 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 133 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 176
>dbj|AP006296.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-137N23, complete sequence Length = 57462 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 240 ctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||||||||||| |||||||||||||| ||||| Sbjct: 27803 ctggctttgcttttgttgaatttgaagatccccgagatgc 27842
>ref|NM_003017.3| Homo sapiens splicing factor, arginine/serine-rich 3 (SFRS3), mRNA gb|AF107405.1|AF107405 Homo sapiens pre-mRNA splicing factor (SFRS3) mRNA, complete cds Length = 2060 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 228 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 271
>gb|L10838.1|HUMSRP20 Homo sapiens SR protein family, pre-mRNA splicing factor (SRp20) mRNA, complete cds Length = 528 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 133 ccacccggctttgcttttgttgaatttgaagatccccgagatgc 176
>ref|XM_532124.2| PREDICTED: Canis familiaris splicing factor (SRP20), mRNA Length = 3035 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgc 288 ||||||||||||||||| |||||||||||||| ||||| | |||||| Sbjct: 670 ggctttgcttttgttgaatttgaagatccccgagatgcagcggatgc 716
>emb|AJ388517.1|CFA388517 Canis familiaris mRNA for partial splicing factor SRp20 (srp20 gene) Length = 511 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgc 288 ||||||||||||||||| |||||||||||||| ||||| | |||||| Sbjct: 250 ggctttgcttttgttgaatttgaagatccccgagatgcagcggatgc 296
>gb|DQ244543.1| Zea mays clone 9049 mRNA sequence Length = 1164 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 555 ttgttgattatacaaactatgatgatatgaagtatgctataaggaagcttgatgatac 612 ||||||| || || ||||||||||| ||||||||||| |||||||| || |||||||| Sbjct: 533 ttgttgactacaccaactatgatgacatgaagtatgcgataaggaaactggatgatac 590
>emb|CR722126.2|CNS0GK50 Tetraodon nigroviridis full-length cDNA Length = 1089 Score = 60.0 bits (30), Expect = 2e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccc 271 |||||||||||||||||||||||||||||| Sbjct: 282 ggctttgcttttgttgagtttgaagatccc 311
>emb|CR698182.2|CNS0G1O2 Tetraodon nigroviridis full-length cDNA Length = 1087 Score = 60.0 bits (30), Expect = 2e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccc 271 |||||||||||||||||||||||||||||| Sbjct: 282 ggctttgcttttgttgagtttgaagatccc 311
>emb|CR695345.2|CNS0FZH9 Tetraodon nigroviridis full-length cDNA Length = 1076 Score = 60.0 bits (30), Expect = 2e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccc 271 |||||||||||||||||||||||||||||| Sbjct: 281 ggctttgcttttgttgagtttgaagatccc 310
>emb|CR695351.1|CNS0FZHF Tetraodon nigroviridis full-length cDNA Length = 1075 Score = 60.0 bits (30), Expect = 2e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccc 271 |||||||||||||||||||||||||||||| Sbjct: 282 ggctttgcttttgttgagtttgaagatccc 311
>emb|CR690822.1|CNS0FVZM Tetraodon nigroviridis full-length cDNA Length = 1068 Score = 60.0 bits (30), Expect = 2e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccc 271 |||||||||||||||||||||||||||||| Sbjct: 276 ggctttgcttttgttgagtttgaagatccc 305
>emb|CR685969.2|CNS0FS8T Tetraodon nigroviridis full-length cDNA Length = 1085 Score = 60.0 bits (30), Expect = 2e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccc 271 |||||||||||||||||||||||||||||| Sbjct: 276 ggctttgcttttgttgagtttgaagatccc 305
>emb|CR683618.1|CNS0FQFI Tetraodon nigroviridis full-length cDNA Length = 1083 Score = 60.0 bits (30), Expect = 2e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccc 271 |||||||||||||||||||||||||||||| Sbjct: 282 ggctttgcttttgttgagtttgaagatccc 311
>gb|AC158333.1| Homo sapiens chromosome 2 clone WI2-3762I17, complete sequence Length = 41721 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 242 ggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||||||||| |||||||||||||| ||||| Sbjct: 20315 ggctttgcttttgttgaatttgaagatccccgagatgc 20278
>gb|AC092106.5| Homo sapiens BAC clone RP11-707E21 from 2, complete sequence Length = 76679 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 242 ggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||||||||| |||||||||||||| ||||| Sbjct: 55561 ggctttgcttttgttgaatttgaagatccccgagatgc 55524
>gb|AC009963.11| Homo sapiens BAC clone RP11-368F12 from 2, complete sequence Length = 190043 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 242 ggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||||||||| |||||||||||||| ||||| Sbjct: 87690 ggctttgcttttgttgaatttgaagatccccgagatgc 87653
>gb|AC114755.4| Homo sapiens BAC clone RP11-274P16 from 2, complete sequence Length = 195403 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 242 ggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||||||||| |||||||||||||| ||||| Sbjct: 2717 ggctttgcttttgttgaatttgaagatccccgagatgc 2680
>gb|AY649842.1| Zea mays ASF/SF2-like pre-mRNA splicing factor SRP30 (srp30) gene, complete cds, alternatively spliced Length = 21267 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 545 actattggaattgttgattatacaaactatgatgatatgaa 585 |||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 13473 actattggaattgtggattatacaaattatgacgatatgaa 13513 Score = 48.1 bits (24), Expect = 0.074 Identities = 54/64 (84%) Strand = Plus / Plus Query: 258 agtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaactttg 317 ||||||| ||||| |||||||| || ||||| ||| | ||||| ||||| || ||||||| Sbjct: 12752 agtttgaggatccacgtgatgctgatgatgcaatttatggccgtgatgggtataactttg 12811 Query: 318 atgg 321 |||| Sbjct: 12812 atgg 12815 Score = 42.1 bits (21), Expect = 4.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 500 gctggtgatgtttgtttctctgaggtgtatcgtgagg 536 ||||||||||| ||||||||||| || || ||||||| Sbjct: 13231 gctggtgatgtctgtttctctgatgtataccgtgagg 13267
>ref|XM_001109748.1| PREDICTED: Macaca mulatta hypothetical protein LOC713742 (LOC713742), mRNA Length = 911 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccccg 273 ||||||||||||||||| |||||||||||||| Sbjct: 266 ggctttgcttttgttgaatttgaagatccccg 297
>gb|AC183275.3| Pan troglodytes BAC clone CH251-16D10 from chromosome 2, complete sequence Length = 180877 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 244 ctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||||||| |||||||||||||| ||||| Sbjct: 140870 ctttgcttttgttgaatttgaagatccccgagatgc 140835
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence Length = 129197 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 437 gttctggttactggactaccttcttctgcatcatggcaagatct 480 ||||||||||||||| | ||| ||||||| |||||||||||||| Sbjct: 70307 gttctggttactggattgcctccttctgcttcatggcaagatct 70264 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 ggttgaacttgcacatggtgg 354 ||||||||||||||||||||| Sbjct: 70559 ggttgaacttgcacatggtgg 70539
>ref|NM_001034700.1| Bos taurus similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA splicing factor SRP20) (X16 protein) (MGC127913), mRNA gb|BC102735.1| Bos taurus similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA splicing factor SRP20) (X16 protein), mRNA (cDNA clone MGC:127913 IMAGE:30957672), complete cds Length = 986 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccccg 273 ||||||||||||||||| |||||||||||||| Sbjct: 265 ggctttgcttttgttgaatttgaagatccccg 296
>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence Length = 110437 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 437 gttctggttactggactaccttcttctgcatcatggcaagatct 480 ||||||||||||||| | ||| ||||||| |||||||||||||| Sbjct: 60047 gttctggttactggattgcctccttctgcttcatggcaagatct 60004 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Minus Query: 334 ggttgaacttgcacatggtggga 356 ||||||||||||||||||||||| Sbjct: 60300 ggttgaacttgcacatggtggga 60278
>gb|BT028528.1| Gasterosteus aculeatus clone CNB238-G08 mRNA sequence Length = 3078 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaagatccccgtgatgcc 280 |||||||||||||| ||||||||||||||| | |||||| Sbjct: 219 ggctttgcttttgtagagtttgaagatcccagagatgcc 257
>ref|NM_001005054.1| Xenopus tropicalis MGC89287 protein (MGC89287), mRNA gb|BC076942.1| Xenopus tropicalis MGC89287 protein, mRNA (cDNA clone MGC:89287 IMAGE:6978611), complete cds Length = 1481 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 245 tttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||| || |||||||||||||||||||| Sbjct: 221 tttgcttttgtagaatttgaagatccccgtgatgc 255
>gb|BC046661.1| Xenopus laevis splicing factor, arginine/serine-rich 3, mRNA (cDNA clone MGC:52931 IMAGE:4930117), complete cds Length = 3345 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 245 tttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||| ||||||||||||| ||||||||| Sbjct: 215 tttgcttttgtagagtttgaagatctccgtgatgc 249
>emb|CT025261.2| Xenopus tropicalis finished cDNA, clone TEgg112p08 Length = 1439 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 245 tttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||| || |||||||||||||||||||| Sbjct: 176 tttgcttttgtagaatttgaagatccccgtgatgc 210
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 549 ttggaattgttgattatacaaactatgatgatatgaagtatgc 591 |||||||||| |||||||||| |||||| || ||||||||||| Sbjct: 11945305 ttggaattgtggattatacaacctatgaagacatgaagtatgc 11945347 Score = 48.1 bits (24), Expect = 0.074 Identities = 54/64 (84%) Strand = Plus / Plus Query: 258 agtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaactttg 317 ||||||| |||||||||||||| || ||||| ||| ||||| ||||| || ||||||| Sbjct: 11944392 agtttgaggatccccgtgatgctgatgatgcaatttgcggccgtgatgggtataactttg 11944451 Query: 318 atgg 321 |||| Sbjct: 11944452 atgg 11944455
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1012D10 Length = 168267 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 549 ttggaattgttgattatacaaactatgatgatatgaagtatgc 591 |||||||||| |||||||||| |||||| || ||||||||||| Sbjct: 157590 ttggaattgtggattatacaacctatgaagacatgaagtatgc 157632 Score = 48.1 bits (24), Expect = 0.074 Identities = 54/64 (84%) Strand = Plus / Plus Query: 258 agtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaactttg 317 ||||||| |||||||||||||| || ||||| ||| ||||| ||||| || ||||||| Sbjct: 156677 agtttgaggatccccgtgatgctgatgatgcaatttgcggccgtgatgggtataactttg 156736 Query: 318 atgg 321 |||| Sbjct: 156737 atgg 156740
>emb|CR761747.2| Xenopus tropicalis finished cDNA, clone TGas080p18 Length = 1434 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 245 tttgcttttgttgagtttgaagatccccgtgatgc 279 ||||||||||| || |||||||||||||||||||| Sbjct: 179 tttgcttttgtagaatttgaagatccccgtgatgc 213
>gb|AY398433.1| Danio rerio clone RK138A3D02 splicing factor, arginine/serine-rich 3 (SFRS3) mRNA, complete cds Length = 967 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgcc 280 ||||| ||||| ||||||||||||||||| || ||||||||| Sbjct: 180 cctggttttgcgtttgttgagtttgaagaccctcgtgatgcc 221
>gb|DQ200373.1| Solanum tuberosum clone 059F05 pre-mRNA splicing factor-like protein mRNA, complete cds Length = 1257 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 566 acaaactatgatgatatgaagtatgctataaggaagcttgatgatactga 615 ||||| ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 589 acaaattatgaagacatgaaatatgctataagaaaacttgatgatactga 638 Score = 48.1 bits (24), Expect = 0.074 Identities = 45/52 (86%) Strand = Plus / Plus Query: 300 gagatggctacaactttgatgggaatcgcctgagggttgaacttgcacatgg 351 |||||||||||||||||||||| | | ||||||||||| ||||| ||||| Sbjct: 299 gagatggctacaactttgatggctgtaggctgagggttgagcttgctcatgg 350 Score = 46.1 bits (23), Expect = 0.29 Identities = 77/95 (81%) Strand = Plus / Plus Query: 134 tacgttgggaacctcccaggggatatcagggagcgggaggtggaggatctgttctacaag 193 |||||||| ||||| |||| ||||| | ||| | ||| || || ||||| ||||||||| Sbjct: 133 tacgttggcaacctaccagcagatataaaggaactggaagttgaagatctattctacaag 192 Query: 194 tatggacggatagtggaaattgacttgaaggtccc 228 ||||| || ||| |||| ||||| |||||| |||| Sbjct: 193 tatggtcgtatattggacattgagttgaagatccc 227
>ref|NM_201323.1| Danio rerio splicing factor, arginine/serine-rich 3 (sfrs3), transcript variant 2, mRNA gb|BC053132.1| Danio rerio splicing factor, arginine/serine-rich 3, mRNA (cDNA clone MGC:63887 IMAGE:6789701), complete cds Length = 984 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgcc 280 ||||| ||||| ||||||||||||||||| || ||||||||| Sbjct: 188 cctggttttgcgtttgttgagtttgaagaccctcgtgatgcc 229
>gb|AF394585.1| Galleria mellonella RNA binding-like protein mRNA, partial cds Length = 171 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgccgagga 285 ||||| || ||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 58 ccaccaggatttgcttttgtcgaatttgaggatccacgtgatgccgagga 107
>gb|BC077185.1| Xenopus laevis MGC78845 protein, mRNA (cDNA clone MGC:78845 IMAGE:3402863), complete cds Length = 1301 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagat 268 |||||||| ||||| |||||||||||||||||| Sbjct: 175 ccacctggatttgcctttgttgagtttgaagat 207
>ref|NM_144354.2| Drosophila melanogaster SF2 CG6987-RA (SF2), mRNA Length = 1388 Score = 50.1 bits (25), Expect = 0.019 Identities = 40/45 (88%) Strand = Plus / Plus Query: 245 tttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 ||||||||||||||||| |||||| | || |||||||| |||||| Sbjct: 229 tttgcttttgttgagttcgaagatgcgcgggatgccgacgatgcg 273
>gb|AY051919.1| Drosophila melanogaster LD40489 full length cDNA Length = 1395 Score = 50.1 bits (25), Expect = 0.019 Identities = 40/45 (88%) Strand = Plus / Plus Query: 245 tttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 ||||||||||||||||| |||||| | || |||||||| |||||| Sbjct: 217 tttgcttttgttgagttcgaagatgcgcgggatgccgacgatgcg 261
>gb|AF232773.1|AF232773 Drosophila melanogaster SR family splicing factor SF2 (SF2) mRNA, complete cds Length = 1391 Score = 50.1 bits (25), Expect = 0.019 Identities = 40/45 (88%) Strand = Plus / Plus Query: 245 tttgcttttgttgagtttgaagatccccgtgatgccgaggatgcg 289 ||||||||||||||||| |||||| | || |||||||| |||||| Sbjct: 217 tttgcttttgttgagttcgaagatgcgcgggatgccgacgatgcg 261
>dbj|AP006409.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT25E08, TM0299, complete sequence Length = 109465 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Minus Query: 437 gttctggttactggactaccttcttctgcatcatggcaaga 477 |||||||| |||||| ||||| ||||||| ||||||||||| Sbjct: 92230 gttctggtgactggattacctccttctgcttcatggcaaga 92190 Score = 44.1 bits (22), Expect = 1.2 Identities = 40/46 (86%) Strand = Plus / Minus Query: 594 taaggaagcttgatgatactgaatttaaaaatgccttctctcgagc 639 ||||||| |||||||| | |||||| |||||||||||||||||| Sbjct: 91195 taaggaaacttgatgactcagaatttcgaaatgccttctctcgagc 91150 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 ggttgaacttgcacatggtgg 354 ||||||||||||||||||||| Sbjct: 92479 ggttgaacttgcacatggtgg 92459
>ref|XM_393525.3| PREDICTED: Apis mellifera similar to SF2 CG6987-PA (LOC410040), mRNA Length = 882 Score = 48.1 bits (24), Expect = 0.074 Identities = 39/44 (88%) Strand = Plus / Plus Query: 470 tggcaagatctaaaggatcatatgagaaaggctggtgatgtttg 513 ||||||||| |||||||||||||| | | |||||||||||||| Sbjct: 538 tggcaagatttaaaggatcatatgcgtgaagctggtgatgtttg 581
>ref|XM_001071004.1| PREDICTED: Rattus norvegicus RNA binding motif protein, X chromosome retrogene (predicted) (Rbmxrt_predicted), mRNA Length = 1628 Score = 48.1 bits (24), Expect = 0.074 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 caagtatggacggatagtggaaat 213 |||||||||||||||||||||||| Sbjct: 275 caagtatggacggatagtggaaat 298
>ref|XM_226369.4| PREDICTED: Rattus norvegicus RNA binding motif protein, X chromosome retrogene (predicted) (Rbmxrt_predicted), mRNA Length = 1628 Score = 48.1 bits (24), Expect = 0.074 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 caagtatggacggatagtggaaat 213 |||||||||||||||||||||||| Sbjct: 275 caagtatggacggatagtggaaat 298
>ref|XM_001056834.1| PREDICTED: Rattus norvegicus similar to Heterogeneous nuclear ribonucleoprotein G (hnRNP G) (RNA-binding motif protein, X chromosome), transcript variant 2 (LOC679457), mRNA Length = 1679 Score = 48.1 bits (24), Expect = 0.074 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 caagtatggacggatagtggaaat 213 |||||||||||||||||||||||| Sbjct: 324 caagtatggacggatagtggaaat 347
>ref|XM_001056767.1| PREDICTED: Rattus norvegicus similar to Heterogeneous nuclear ribonucleoprotein G (hnRNP G) (RNA-binding motif protein, X chromosome), transcript variant 1 (LOC679457), mRNA Length = 1637 Score = 48.1 bits (24), Expect = 0.074 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 caagtatggacggatagtggaaat 213 |||||||||||||||||||||||| Sbjct: 282 caagtatggacggatagtggaaat 305
>ref|XM_001058419.1| PREDICTED: Rattus norvegicus similar to Heterogeneous nuclear ribonucleoprotein G (hnRNP G) (RNA-binding motif protein, X chromosome), transcript variant 2 (LOC680944), mRNA Length = 1694 Score = 48.1 bits (24), Expect = 0.074 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 caagtatggacggatagtggaaat 213 |||||||||||||||||||||||| Sbjct: 324 caagtatggacggatagtggaaat 347
>ref|XM_001058360.1| PREDICTED: Rattus norvegicus similar to Heterogeneous nuclear ribonucleoprotein G (hnRNP G) (RNA-binding motif protein, X chromosome), transcript variant 1 (LOC680944), mRNA Length = 1652 Score = 48.1 bits (24), Expect = 0.074 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 caagtatggacggatagtggaaat 213 |||||||||||||||||||||||| Sbjct: 282 caagtatggacggatagtggaaat 305
>gb|AY197342.1| Paralichthys olivaceus splicing factor arginine/serine-rich 3 mRNA, complete cds Length = 1291 Score = 48.1 bits (24), Expect = 0.074 Identities = 33/36 (91%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccc 271 ||||| || ||||||||||| ||||||||||||||| Sbjct: 283 ccaccaggttttgcttttgtagagtttgaagatccc 318
>ref|NM_001011096.1| Xenopus tropicalis FUS interacting protein (serine-arginine rich) 1 (fusip1), mRNA gb|BC084490.1| Xenopus tropicalis FUS interacting protein (serine-arginine rich) 1, mRNA (cDNA clone MGC:89463 IMAGE:6991587), complete cds Length = 2108 Score = 48.1 bits (24), Expect = 0.074 Identities = 39/44 (88%) Strand = Plus / Plus Query: 245 tttgcttttgttgagtttgaagatccccgtgatgccgaggatgc 288 ||||||| |||| ||||||||||| ||||||||| |||||||| Sbjct: 252 tttgcttatgttcagtttgaagatgtccgtgatgcagaggatgc 295
>gb|AC136101.2| Rattus norvegicus 4 BAC CH230-158D16 (Children's Hospital Oakland Research Institute) complete sequence Length = 160605 Score = 48.1 bits (24), Expect = 0.074 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 caagtatggacggatagtggaaat 213 |||||||||||||||||||||||| Sbjct: 57652 caagtatggacggatagtggaaat 57675
>emb|CR760770.2| Xenopus tropicalis finished cDNA, clone TTpA009e01 Length = 1726 Score = 48.1 bits (24), Expect = 0.074 Identities = 39/44 (88%) Strand = Plus / Plus Query: 245 tttgcttttgttgagtttgaagatccccgtgatgccgaggatgc 288 ||||||| |||| ||||||||||| ||||||||| |||||||| Sbjct: 194 tttgcttatgttcagtttgaagatgtccgtgatgcagaggatgc 237
>emb|CT868739.5| M.truncatula DNA sequence from clone MTH2-5K22 on chromosome 3, complete sequence Length = 54465 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Minus Query: 483 aggatcatatgagaaaggctggtgatgtttg 513 ||||||||||| |||| |||||||||||||| Sbjct: 18198 aggatcatatgcgaaaagctggtgatgtttg 18168
>ref|XM_397274.3| PREDICTED: Apis mellifera similar to Rbp1-like CG1987-PA (LOC413835), mRNA Length = 583 Score = 46.1 bits (23), Expect = 0.29 Identities = 32/35 (91%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatcc 270 |||||||| ||||||||||| || ||||||||||| Sbjct: 227 ccacctggatttgcttttgtggaatttgaagatcc 261
>gb|AC167684.2| Daphnia pulex clone JGIAZSN-5E16, complete sequence Length = 37583 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Minus Query: 245 tttgcttttgttgagtttgaagatccc 271 |||||||||||||| |||||||||||| Sbjct: 5716 tttgcttttgttgaatttgaagatccc 5690 Score = 44.1 bits (22), Expect = 1.2 Identities = 43/50 (86%) Strand = Plus / Minus Query: 466 atcatggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtt 515 ||||||||||||| | || ||||| |||||| | ||||||||||| |||| Sbjct: 5190 atcatggcaagatttgaaagatcacatgagagaagctggtgatgtgtgtt 5141
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1008 ttcttcaaattcttcatattttt 1030 ||||||||||||||||||||||| Sbjct: 2357399 ttcttcaaattcttcatattttt 2357377
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 ggccggcgacgacgccgcgcgcgccg 63 ||||||||||||||||| |||||||| Sbjct: 5015705 ggccggcgacgacgccgtgcgcgccg 5015730
>ref|NM_001007486.1| Xenopus tropicalis MGC79485 protein (MGC79485), mRNA gb|BC079925.1| Xenopus tropicalis MGC79485 protein, mRNA (cDNA clone MGC:79485 IMAGE:6976658), complete cds Length = 1307 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagat 268 ||||| ||||| |||||||||||||||||| Sbjct: 180 cctggatttgcgtttgttgagtttgaagat 209
>gb|AF171033.1| Anopheles funestus clone AF3 microsatellite sequence Length = 363 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 388 tggtggtggaggacgccgtggtggtg 413 |||||||||||| ||||||||||||| Sbjct: 210 tggtggtggaggccgccgtggtggtg 185
>gb|AC144541.12| Medicago truncatula clone mth2-28a1, complete sequence Length = 123800 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 ggttgaacttgcacatggtggg 355 |||||||||||||||||||||| Sbjct: 27081 ggttgaacttgcacatggtggg 27102
>gb|AC111151.3| Homo sapiens chromosome 11, clone CTD-2557D6, complete sequence Length = 131271 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 458 tcttctgcatcatggcaagatc 479 |||||||||||||||||||||| Sbjct: 37536 tcttctgcatcatggcaagatc 37515
>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete sequence Length = 196093 Score = 44.1 bits (22), Expect = 1.2 Identities = 37/42 (88%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgcc 280 ||||||||| |||| ||||| |||||||||||| | |||||| Sbjct: 51095 cctggctttcctttagttgaatttgaagatccctgggatgcc 51136
>dbj|AP008240.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39G20, TM0353a, complete sequence Length = 78736 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1013 caaattcttcatatttttcttc 1034 |||||||||||||||||||||| Sbjct: 53218 caaattcttcatatttttcttc 53239
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 cggcgacgacgccgcgcgcgcc 62 |||||||||||||||||||||| Sbjct: 1168716 cggcgacgacgccgcgcgcgcc 1168737 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 cggcgacgacgccgcgcgcgc 61 ||||||||||||||||||||| Sbjct: 1844457 cggcgacgacgccgcgcgcgc 1844477
>emb|AL732567.8| Zebrafish DNA sequence from clone CH211-263A23 in linkage group 6, complete sequence Length = 152840 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaaga 267 |||||||||||||| ||||||||||| Sbjct: 146305 ggctttgcttttgtggagtttgaaga 146330
>emb|AJ131214.1|ATH131214 Arabidopsis thaliana srp30 gene, exons 1-12 Length = 5164 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 555 ttgttgattatacaaactatgatgatatgaagta 588 |||| ||||||| |||||||||||||||||||| Sbjct: 2980 ttgtggattatagcaactatgatgatatgaagta 3013
>dbj|AK174445.1| Ciona intestinalis cDNA, clone:cieg001n08, full insert sequence Length = 947 Score = 44.1 bits (22), Expect = 1.2 Identities = 40/46 (86%) Strand = Plus / Plus Query: 470 tggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtt 515 ||||||||| |||| ||||| ||||| | |||||||||||||||| Sbjct: 427 tggcaagatttaaaagatcacatgagggaagctggtgatgtttgtt 472
>emb|BX323053.6| Zebrafish DNA sequence from clone DKEYP-53E9 in linkage group 12, complete sequence Length = 92153 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1009 tcttcaaattcttcatatttttcttc 1034 ||||||||||||||| |||||||||| Sbjct: 7675 tcttcaaattcttcaaatttttcttc 7700
>ref|NM_001002053.1| Danio rerio splicing factor, arginine/serine-rich 3 (sfrs3), transcript variant 1, mRNA gb|BC071322.1| Danio rerio splicing factor, arginine/serine-rich 3, mRNA (cDNA clone MGC:86626 IMAGE:6892941), complete cds Length = 1040 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 ggctttgcttttgttgagtttgaaga 267 |||||||||||||| ||||||||||| Sbjct: 295 ggctttgcttttgtggagtttgaaga 320
>dbj|AK116985.1| Ciona intestinalis cDNA, clone:cits012l11, full insert sequence Length = 1142 Score = 44.1 bits (22), Expect = 1.2 Identities = 40/46 (86%) Strand = Plus / Plus Query: 470 tggcaagatctaaaggatcatatgagaaaggctggtgatgtttgtt 515 ||||||||| |||| ||||| ||||| | |||||||||||||||| Sbjct: 618 tggcaagatttaaaagatcacatgagggaagctggtgatgtttgtt 663
>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete sequence Length = 59261 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 555 ttgttgattatacaaactatgatgatatgaagta 588 |||| ||||||| |||||||||||||||||||| Sbjct: 57482 ttgtggattatagcaactatgatgatatgaagta 57515
>emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in linkage group 12, complete sequence Length = 262809 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1009 tcttcaaattcttcatatttttcttc 1034 ||||||||||||||| |||||||||| Sbjct: 10452 tcttcaaattcttcaaatttttcttc 10477
>gb|AC167363.3| Mus musculus BAC clone RP23-73N16 from chromosome 17, complete sequence Length = 238581 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 54694 cctggctttgctttcgtcgaatttgaggatccccgagatgc 54734
>ref|NM_022764.2| Homo sapiens methenyltetrahydrofolate synthetase domain containing (MTHFSD), mRNA Length = 3059 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 tttacgttgggaacctcccagggga 156 ||||||||||||||||||| ||||| Sbjct: 971 tttacgttgggaacctccccgggga 995
>gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, complete genome Length = 2998664 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cgacgacgccgcgcgcgccgc 64 ||||||||||||||||||||| Sbjct: 1548386 cgacgacgccgcgcgcgccgc 1548406
>dbj|AK239411.1| Sus scrofa mRNA, clone:THY010101F02, expressed in thymus Length = 2183 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 747 agcagaagccgaagtggcagc 767
>dbj|AK238830.1| Sus scrofa mRNA, clone:THY010035D09, expressed in thymus Length = 1845 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 37 agcagaagccgaagtggcagc 57
>ref|NM_001077216.1| Sus scrofa splicing factor, arginine/serine-rich 4 (SFRS4), mRNA gb|DQ972965.1| Sus scrofa SFRS4 mRNA, complete cds Length = 1476 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 610 agcagaagccgaagtggcagc 630
>ref|XM_001168551.1| PREDICTED: Pan troglodytes coiled-coil domain containing 14, transcript variant 1 (CCDC14), mRNA Length = 4257 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1136 ttattgagatttatgtacttt 1156 ||||||||||||||||||||| Sbjct: 512 ttattgagatttatgtacttt 492
>ref|XM_001168634.1| PREDICTED: Pan troglodytes coiled-coil domain containing 14, transcript variant 3 (CCDC14), mRNA Length = 5387 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1136 ttattgagatttatgtacttt 1156 ||||||||||||||||||||| Sbjct: 512 ttattgagatttatgtacttt 492
>ref|XM_001168717.1| PREDICTED: Pan troglodytes coiled-coil domain containing 14, transcript variant 7 (CCDC14), mRNA Length = 5864 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1136 ttattgagatttatgtacttt 1156 ||||||||||||||||||||| Sbjct: 512 ttattgagatttatgtacttt 492
>ref|XM_001154879.1| PREDICTED: Pan troglodytes splicing factor, arginine/serine-rich 4, transcript variant 3 (SFRS4), mRNA Length = 2069 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 765 agcagaagccgaagtggcagc 785
>ref|XM_001154822.1| PREDICTED: Pan troglodytes splicing factor, arginine/serine-rich 4, transcript variant 2 (SFRS4), mRNA Length = 2246 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 699 agcagaagccgaagtggcagc 719
>ref|XM_001155098.1| PREDICTED: Pan troglodytes splicing factor, arginine/serine-rich 4, transcript variant 6 (SFRS4), mRNA Length = 2330 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 783 agcagaagccgaagtggcagc 803
>ref|XM_001155042.1| PREDICTED: Pan troglodytes splicing factor, arginine/serine-rich 4, transcript variant 5 (SFRS4), mRNA Length = 2330 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 783 agcagaagccgaagtggcagc 803
>ref|XM_001154531.1| PREDICTED: Pan troglodytes splicing factor, arginine/serine-rich 4, transcript variant 1 (SFRS4), mRNA Length = 1726 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 783 agcagaagccgaagtggcagc 803
>gb|DQ893846.1| Homo sapiens clone FLH164911.01L; RZPDo839D07157D SFRS4 mRNA, partial sequence Length = 1485 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 610 agcagaagccgaagtggcagc 630
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 cgacgccgcgcgcgccgcgaacccg 71 |||||||| |||||||||||||||| Sbjct: 6736672 cgacgccgtgcgcgccgcgaacccg 6736696
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 gccggcgacgacgccgcgcgcgccg 63 ||||||||||||||||||| ||||| Sbjct: 1145035 gccggcgacgacgccgcgcccgccg 1145059
>gb|AC189417.1| Brassica rapa subsp. pekinensis clone KBrB062J16, complete sequence Length = 137889 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 gctttgcttttgttgagtttg 263 ||||||||||||||||||||| Sbjct: 136450 gctttgcttttgttgagtttg 136430
>ref|XM_001123058.1| PREDICTED: Apis mellifera similar to Rbp1-like CG1987-PA (LOC727349), partial mRNA Length = 499 Score = 42.1 bits (21), Expect = 4.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagatccccgtgatgccgaggatgc 288 ||||| || ||||||||||| || ||||||||||| || ||||| || ||||| Sbjct: 333 ccaccgggatttgcttttgtagaatttgaagatccacgagatgcagaagatgc 385
>ref|XM_001122800.1| PREDICTED: Apis mellifera similar to splicing factor, arginine/serine-rich 7 (LOC727087), mRNA Length = 893 Score = 42.1 bits (21), Expect = 4.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagat 268 |||||||| ||||||||||| || ||||||||| Sbjct: 408 ccacctggatttgcttttgtggaatttgaagat 440
>ref|XM_395569.3| PREDICTED: Apis mellifera similar to CG11098-PA, isoform A (LOC412103), mRNA Length = 3969 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1010 cttcaaattcttcatattttt 1030 ||||||||||||||||||||| Sbjct: 2161 cttcaaattcttcatattttt 2141
>ref|NM_001047907.1| Rattus norvegicus splicing factor, arginine/serine-rich 3 (SRp20) (predicted) (Sfrs3_predicted), mRNA gb|DQ480748.1| Rattus norvegicus clone GDY22 unknown mRNA Length = 2869 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 241 cctggctttgctttcgtcgaatttgaggatccccgagatgc 281
>ref|XM_001059870.1| PREDICTED: Rattus norvegicus similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA splicing factor SRP20) (X16 protein), transcript variant 2 (LOC682323), mRNA Length = 1327 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 265 cctggctttgctttcgtcgaatttgaggatccccgagatgc 305
>ref|XM_001059807.1| PREDICTED: Rattus norvegicus similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA splicing factor SRP20) (X16 protein), transcript variant 1 (LOC682323), mRNA Length = 1279 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 217 cctggctttgctttcgtcgaatttgaggatccccgagatgc 257
>ref|XM_001054653.1| PREDICTED: Rattus norvegicus similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA splicing factor SRP20) (X16 protein), transcript variant 2 (LOC680129), mRNA Length = 1327 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 265 cctggctttgctttcgtcgaatttgaggatccccgagatgc 305
>ref|XM_001054598.1| PREDICTED: Rattus norvegicus similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA splicing factor SRP20) (X16 protein), transcript variant 1 (LOC680129), mRNA Length = 1279 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 217 cctggctttgctttcgtcgaatttgaggatccccgagatgc 257
>ref|XM_001113479.1| PREDICTED: Macaca mulatta similar to Splicing factor, arginine/serine-rich 4, transcript variant 2 (SFRS4), mRNA Length = 2249 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 702 agcagaagccgaagtggcagc 722
>ref|XM_001113540.1| PREDICTED: Macaca mulatta similar to Splicing factor, arginine/serine-rich 4, transcript variant 4 (SFRS4), mRNA Length = 2333 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 786 agcagaagccgaagtggcagc 806
>ref|XM_001113369.1| PREDICTED: Macaca mulatta similar to Splicing factor, arginine/serine-rich 4, transcript variant 1 (SFRS4), mRNA Length = 1729 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 786 agcagaagccgaagtggcagc 806
>gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence Length = 2788459 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cgacgacgccgcgcgcgccgc 64 ||||||||||||||||||||| Sbjct: 932738 cgacgacgccgcgcgcgccgc 932718
>ref|XM_987281.1| PREDICTED: Mus musculus similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA splicing factor SRP20) (X16 protein) (LOC671467), mRNA Length = 923 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 257 cctggctttgctttcgtcgaatttgaggatccccgagatgc 297
>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete sequence Length = 231197 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 57486 cctggctttgctttcgtcgaatttgaggatccccgagatgc 57526
>gb|AC153000.5| Medicago truncatula clone mth2-94c2, complete sequence Length = 97390 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 aaggatcatatgagaaaggct 502 ||||||||||||||||||||| Sbjct: 36484 aaggatcatatgagaaaggct 36464
>gb|DQ213839.1| Taeniopygia guttata clone 0061P0018H06 splicing factor arginine/serine-rich 3 (SRp20) variant 1-like mRNA, complete sequence Length = 1391 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 ||||| ||||| ||||| || |||||||||||||| ||||| Sbjct: 242 cctgggtttgcctttgtggaatttgaagatccccgagatgc 282
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cgacgacgccgcgcgcgccgc 64 ||||||||||||||||||||| Sbjct: 1431166 cgacgacgccgcgcgcgccgc 1431146
>gb|AF506028.1| Poncirus trifoliata citrus tristeza virus resistance gene locus, complete sequence Length = 282699 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 835 atcaagatcaccagcaaaatc 855 ||||||||||||||||||||| Sbjct: 55733 atcaagatcaccagcaaaatc 55713
>gb|BC083316.1| Mus musculus splicing factor, arginine/serine-rich 3 (SRp20), mRNA (cDNA clone MGC:101928 IMAGE:6818630), complete cds Length = 1299 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 237 cctggctttgctttcgtcgaatttgaggatccccgagatgc 277
>gb|BC068111.1| Mus musculus splicing factor, arginine/serine-rich 3 (SRp20), mRNA (cDNA clone MGC:92931 IMAGE:5710934), complete cds Length = 1305 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 245 cctggctttgctttcgtcgaatttgaggatccccgagatgc 285
>gb|AY915184.1| Schistosoma japonicum SJCHGC03343 protein mRNA, partial cds Length = 717 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1011 ttcaaattcttcatatttttc 1031 ||||||||||||||||||||| Sbjct: 277 ttcaaattcttcatatttttc 257
>gb|AY815512.1| Schistosoma japonicum SJCHGC09413 protein mRNA, complete cds Length = 855 Score = 42.1 bits (21), Expect = 4.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagat 268 ||||| || ||||| |||||||||||||||||| Sbjct: 139 ccacccggttttgcatttgttgagtttgaagat 171
>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete sequence Length = 100239 Score = 42.1 bits (21), Expect = 4.6 Identities = 69/85 (81%) Strand = Plus / Minus Query: 253 tgttgagtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaa 312 |||| ||||||| ||| | || ||||| || ||||| ||||| || || |||||||| | Sbjct: 65176 tgtttagtttgatgatgctcgggatgctgaagatgctattcatggtcgtgatggctatga 65117 Query: 313 ctttgatgggaatcgcctgagggtt 337 |||||||||| |||| |||||||| Sbjct: 65116 ctttgatgggcatcgtttgagggtt 65092
>gb|AC009108.10| Homo sapiens chromosome 16 clone RP11-463O9, complete sequence Length = 168656 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 tttacgttgggaacctcccagggga 156 ||||||||||||||||||| ||||| Sbjct: 111596 tttacgttgggaacctccccgggga 111620
>gb|AY223403.1| Schistosoma japonicum clone ZZZ332 mRNA sequence Length = 678 Score = 42.1 bits (21), Expect = 4.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 236 ccacctggctttgcttttgttgagtttgaagat 268 ||||| || ||||| |||||||||||||||||| Sbjct: 168 ccacccggttttgcatttgttgagtttgaagat 200
>ref|XM_535335.2| PREDICTED: Canis familiaris similar to Splicing factor, arginine/serine-rich 4, transcript variant 1 (LOC478160), mRNA Length = 1975 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 417 agcagaagccgaagtggcagc 437
>ref|XM_860323.1| PREDICTED: Canis familiaris similar to Splicing factor, arginine/serine-rich 4, transcript variant 3 (LOC478160), mRNA Length = 2586 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 1028 agcagaagccgaagtggcagc 1048
>gb|AF173640.1| Arabidopsis thaliana splicing factor SR1, alternatively spliced products, complete cds Length = 2926 Score = 42.1 bits (21), Expect = 4.6 Identities = 69/85 (81%) Strand = Plus / Plus Query: 253 tgttgagtttgaagatccccgtgatgccgaggatgcgattcagggccgagatggctacaa 312 |||| ||||||| ||| | || ||||| || ||||| ||||| || || |||||||| | Sbjct: 459 tgtttagtttgatgatgctcgggatgctgaagatgctattcatggtcgtgatggctatga 518 Query: 313 ctttgatgggaatcgcctgagggtt 337 |||||||||| |||| |||||||| Sbjct: 519 ctttgatgggcatcgtttgagggtt 543
>dbj|AK125015.1| Homo sapiens cDNA FLJ43025 fis, clone BRTHA2018707 Length = 3624 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 tttacgttgggaacctcccagggga 156 ||||||||||||||||||| ||||| Sbjct: 1562 tttacgttgggaacctccccgggga 1586
>gb|DQ118834.1| Ranunculus carpaticola clone 4105G microsatellite sequence Length = 375 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 985 gggtggtgagaggcggaggca 1005 ||||||||||||||||||||| Sbjct: 185 gggtggtgagaggcggaggca 165
>gb|AC157365.5| Mus musculus chromosome 8, clone RP23-113A2, complete sequence Length = 193347 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 580 tatgaagtatgctataaggaa 600 ||||||||||||||||||||| Sbjct: 15372 tatgaagtatgctataaggaa 15352
>dbj|AK134177.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830467F20 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1295 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>gb|BT008254.1| Synthetic construct Homo sapiens splicing factor, arginine/serine-rich 4 mRNA, partial cds Length = 1485 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 610 agcagaagccgaagtggcagc 630
>gb|BT007415.1| Homo sapiens splicing factor, arginine/serine-rich 4 mRNA, complete cds Length = 1485 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 610 agcagaagccgaagtggcagc 630
>dbj|AK146253.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730043B15 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1291 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 251 cctggctttgctttcgtcgaatttgaggatccccgagatgc 291
>dbj|AK141440.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530016D07 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 3987 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK150912.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830018D09 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 698 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK135298.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720461N22 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1306 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK146010.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530023N01 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1464 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK145089.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830039N21 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 2089 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 254 cctggctttgctttcgtcgaatttgaggatccccgagatgc 294
>dbj|AK154046.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430029A15 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1302 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK153073.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830120O14 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1920 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK152779.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830085L15 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1920 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK152704.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830082N22 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1293 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 254 cctggctttgctttcgtcgaatttgaggatccccgagatgc 294
>dbj|AK146610.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920034J17 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1293 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK145715.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0033F21 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1293 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK145600.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0020L24 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1293 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK152411.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830069G12 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1920 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK153209.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830127H16 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1303 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK009895.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310047P17 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 2097 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>dbj|AK088122.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004J04 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1440 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 251 cctggctttgctttcgtcgaatttgaggatccccgagatgc 291
>ref|XM_649555.1| Entamoeba histolytica HM-1:IMSS protein kinase (48.t00026) partial mRNA Length = 5778 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1013 caaattcttcatatttttctt 1033 ||||||||||||||||||||| Sbjct: 4099 caaattcttcatatttttctt 4079
>dbj|AK011657.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610034C21 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 1293 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>gb|AC104826.5| Homo sapiens BAC clone RP11-775M3 from 4, complete sequence Length = 138604 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 ctgtaagcaaggaaggatgag 111 ||||||||||||||||||||| Sbjct: 92953 ctgtaagcaaggaaggatgag 92973
>dbj|AK085863.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830019K24 product:hypothetical protein, full insert sequence Length = 2045 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 250 cctggctttgctttcgtcgaatttgaggatccccgagatgc 290
>ref|NM_013663.3| Mus musculus splicing factor, arginine/serine-rich 3 (SRp20) (Sfrs3), mRNA dbj|AK078891.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030625G19 product:splicing factor, arginine/serine-rich 3 (SRp20), full insert sequence Length = 2567 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 253 cctggctttgctttcgtcgaatttgaggatccccgagatgc 293
>emb|AL606526.10| Human DNA sequence from clone RP13-534F18 on chromosome 1, complete sequence Length = 113654 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1016 attcttcatatttttcttcgc 1036 ||||||||||||||||||||| Sbjct: 55185 attcttcatatttttcttcgc 55165
>emb|AL357500.17| Human DNA sequence from clone RP11-242O24 on chromosome 1 Contains the 3' end of the EPB41 gene for erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked), three novel genes, the 3' end of the SFRS4 gene for splicing factor arginine/serine-rich 4 and a CpG island, complete sequence Length = 112392 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 85961 agcagaagccgaagtggcagc 85941
>dbj|AK223444.1| Homo sapiens mRNA for splicing factor, arginine/serine-rich 4 variant, clone: FCC112H02 Length = 1728 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 760 agcagaagccgaagtggcagc 780
>dbj|AB209856.1| Homo sapiens mRNA for splicing factor, arginine/serine-rich 4 variant protein Length = 8245 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 6813 agcagaagccgaagtggcagc 6833
>emb|Y12652.1|IPY12652 I.punctatus mRNA for Oct2 transcription factor beta Length = 2247 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 938 tcccgctctcctgatgccaaa 958 ||||||||||||||||||||| Sbjct: 1860 tcccgctctcctgatgccaaa 1880
>emb|X91656.1|MMSRP20 M.musculus Srp20 gene Length = 13121 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 7162 cctggctttgctttcgtcgaatttgaggatccccgagatgc 7202
>emb|X53824.1|MMX16MR Mouse X16 mRNA Length = 1396 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccccgtgatgc 279 |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 198 cctggctttgctttcgtcgaatttgaggatccccgagatgc 238
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 gccggcgacgacgccgcgcgcgccg 63 |||||||||||| |||||||||||| Sbjct: 139230 gccggcgacgaccccgcgcgcgccg 139254
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 gccggcgacgacgccgcgcgcgccg 63 |||||||||||| |||||||||||| Sbjct: 62284 gccggcgacgaccccgcgcgcgccg 62308
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 gccggcgacgacgccgcgcgcgccg 63 |||||||||||| |||||||||||| Sbjct: 165396 gccggcgacgaccccgcgcgcgccg 165372
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cgacgacgccgcgcgcgccgc 64 ||||||||||||||||||||| Sbjct: 3240746 cgacgacgccgcgcgcgccgc 3240766
>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5 Length = 341050 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 562 ttatacaaactatgatgatat 582 ||||||||||||||||||||| Sbjct: 90138 ttatacaaactatgatgatat 90158
>emb|AJ003122.1|IPAJ3122 Ictalurus punctatus unprocessed RNA for Oct2 transcription factor Length = 3047 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 938 tcccgctctcctgatgccaaa 958 ||||||||||||||||||||| Sbjct: 2661 tcccgctctcctgatgccaaa 2681
>gb|AC117381.5| Homo sapiens 3 BAC RP11-783D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205933 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1136 ttattgagatttatgtacttt 1156 ||||||||||||||||||||| Sbjct: 119674 ttattgagatttatgtacttt 119694
>emb|CR595944.1| full-length cDNA clone CS0DM006YK24 of Fetal liver of Homo sapiens (human) Length = 2235 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 730 agcagaagccgaagtggcagc 750
>emb|AL929393.8| Mouse DNA sequence from clone RP23-94P7 on chromosome 4, complete sequence Length = 202299 Score = 42.1 bits (21), Expect = 4.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 239 cctggctttgcttttgttgagtttgaagatccc 271 |||||||||||||||||||| ||| | |||||| Sbjct: 10341 cctggctttgcttttgttgaattttaggatccc 10373
>gb|AY892104.1| Synthetic construct Homo sapiens clone FLH026098.01L splicing factor arginine/serine-rich 4 (SFRS4) mRNA, partial cds Length = 1485 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 610 agcagaagccgaagtggcagc 630
>gb|AY889646.1| Synthetic construct Homo sapiens clone FLH026101.01X splicing factor arginine/serine-rich 4 (SFRS4) mRNA, complete cds Length = 1485 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 698 agcagaagccgaagtggcagc 718 ||||||||||||||||||||| Sbjct: 610 agcagaagccgaagtggcagc 630
>gb|AC139357.27| Mus musculus chromosome 8, clone RP24-335I20, complete sequence Length = 183851 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 580 tatgaagtatgctataaggaa 600 ||||||||||||||||||||| Sbjct: 74397 tatgaagtatgctataaggaa 74377 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 216,109,420 Number of extensions: 11965413 Number of successful extensions: 250885 Number of sequences better than 10.0: 258 Number of HSP's gapped: 250835 Number of HSP's successfully gapped: 404 Length of query: 1206 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1183 Effective length of database: 18,503,978,556 Effective search space: 21890206631748 Effective search space used: 21890206631748 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
