ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf19c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 274 2e-69
2dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic D... 274 2e-69
3ref|NM_001068170.1| Oryza sativa (japonica cultivar-group) Os08g... 264 2e-66
4dbj|AK066365.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-66
5gb|AF290415.1|AF290415 Zea mays 1L CRS1 (crs1) mRNA, partial cds... 260 3e-65
6gb|AF290414.1|AF290414 Zea mays 1L CRS1 (crs1) mRNA, complete cd... 252 6e-63
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 236 4e-58
8dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic D... 236 4e-58
9dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic D... 236 4e-58
10emb|CT829404.1| Oryza sativa (indica cultivar-group) cDNA clone:... 186 3e-43
11ref|NM_001054620.1| Oryza sativa (japonica cultivar-group) Os02g... 186 3e-43
12dbj|AK068461.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 3e-43
13gb|AY109620.1| Zea mays CL1179_1 mRNA sequence 168 7e-38
14gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome... 161 2e-35
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-35
16dbj|AK242867.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 155 1e-33
17ref|NM_001061855.1| Oryza sativa (japonica cultivar-group) Os05g... 155 1e-33
18gb|AY110484.1| Zea mays CL5021_1 mRNA sequence 139 7e-29
19ref|XM_779534.2| PREDICTED: Strongylocentrotus purpuratus simila... 52 0.012
20ref|XM_001203653.1| PREDICTED: Strongylocentrotus purpuratus sim... 52 0.012
21gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete ... 48 0.19
22ref|NM_001067068.1| Oryza sativa (japonica cultivar-group) Os07g... 46 0.74
23gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcom... 46 0.74
24gb|AC111106.10| Mus musculus chromosome 3, clone RP23-193O12, co... 46 0.74
25gb|AC111141.7| Mus musculus chromosome 3, clone RP23-369G12, com... 46 0.74
26dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.74
27gb|AC139016.12| Homo sapiens 12 BAC RP11-411N4 (Roswell Park Can... 46 0.74
28dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic D... 46 0.74
29dbj|AK119617.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.74
30gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome 46 0.74
31gb|EF013562.1| Cheliomyrmex cf. morosus CASENT0007006 long wavel... 44 2.9
32ref|XM_793604.2| PREDICTED: Strongylocentrotus purpuratus simila... 44 2.9
33ref|XM_001202990.1| PREDICTED: Strongylocentrotus purpuratus sim... 44 2.9
34ref|NM_001071833.1| Oryza sativa (japonica cultivar-group) Os10g... 44 2.9
35ref|NM_001061009.1| Oryza sativa (japonica cultivar-group) Os05g... 44 2.9
36gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 44 2.9
37emb|CT025691.7| Zebrafish DNA sequence from clone CH211-206I4 in... 44 2.9
38gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome... 44 2.9
39gb|DQ195081.1| Oryza sativa (indica cultivar-group) putative leu... 44 2.9
40gb|AY730046.1| Oryza sativa (indica cultivar-group) putative leu... 44 2.9
41gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, compl... 44 2.9
42gb|CP000133.1| Rhizobium etli CFN 42, complete genome 44 2.9
43gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complet... 44 2.9
44gb|AC131213.4| Homo sapiens 12 BAC RP13-544K12 (Roswell Park Can... 44 2.9
45gb|AC010070.8| Drosophila melanogaster 3L BAC RP98-18E21 (Roswel... 44 2.9
46emb|CR974432.6| Pig DNA sequence from clone PigE-204L22 on chrom... 44 2.9
47gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 44 2.9
48gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 44 2.9
49gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 geno... 44 2.9
50dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 2.9
51gb|AC034205.4| Homo sapiens chromosome 5 clone CTB-23I7, complet... 44 2.9
52gb|AF311901.1|AF311901 Citrobacter rodentium strain DBS100 patho... 44 2.9
53gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 2.9
54emb|BX296546.6| Zebrafish DNA sequence from clone CH211-234P1 in... 44 2.9
55dbj|AK107224.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 2.9
56gb|AE005076.1| Halobacterium sp. NRC-1 section 107 of 170 of the... 44 2.9
57gb|AF113135.1|AF113135 Sus scrofa putative G-protein gene sequence 44 2.9
58gb|M30950.1|CHPRGITX Chimpanzee 28S ribosomal RNA gene fragment 44 2.9 
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780
 Score =  274 bits (138), Expect = 2e-69
 Identities = 222/250 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1600     ggaacagtctatgagagagaagtcaacagactgttggacagcttgggccctcggtttgta 1659
                |||||| | ||||| |||||||||||||||||  ||||||| ||||||||||| ||| | 
Sbjct: 16577651 ggaacactatatgaaagagaagtcaacagactactggacagtttgggccctcgatttatc 16577592

                                                                            
Query: 1660     gattggtggtggaacacgccattgcctgtggatgctgatctccttccagaagttgttcca 1719
                ||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| || 
Sbjct: 16577591 gattggtggtggaacacaccattgcctgttgatgctgatctccttcctgaggttgtccct 16577532

                                                                            
Query: 1720     ggattcaaaactccatttagacagtgccctcctggtgtgagaccaacactagcagatgag 1779
                |  ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 16577531 gacttcaagactccatttagacaatgccctcctggtgtgagaccagcactagcagatgag 16577472

                                                                            
Query: 1780     gagctgacatacctgcgcaagcttgcacgtcctttgccaacacattttgctctaggtgat 1839
                |||||||| |||||||| |||| |||||| |||||||||||||||||||  |||||||| 
Sbjct: 16577471 gagctgacctacctgcggaagcatgcacggcctttgccaacacattttgtcctaggtgag 16577412

                          
Query: 1840     tatgctatta 1849
                | ||||||||
Sbjct: 16577411 tttgctatta 16577402



 Score = 56.0 bits (28), Expect = 8e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1331     agataaaatcaggaggtctagttgtttggacaaaaggagacgttcattttgtttacagat 1390
                |||| ||| |||||||  ||||||||||||||| ||| | | | |||||||| |||||| 
Sbjct: 16577884 agattaaaacaggaggcttagttgtttggacaagagggggcatacattttgtgtacagag 16577825

                                    
Query: 1391     gaagtagttatctagaaaac 1410
                |||| ||||| |||||||||
Sbjct: 16577824 gaagcagttacctagaaaac 16577805



 Score = 50.1 bits (25), Expect = 0.047
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                             
Query: 1288     gagccgctccggcagtgcatggacagagcaagggagatacttgag 1332
                |||||||||||||  ||||||||| | ||||||||||| ||||||
Sbjct: 16578469 gagccgctccggcgatgcatggaccgggcaagggagattcttgag 16578425
to top
>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1014_E02
          Length = 159669

 Score =  274 bits (138), Expect = 2e-69
 Identities = 222/250 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1600  ggaacagtctatgagagagaagtcaacagactgttggacagcttgggccctcggtttgta 1659
             |||||| | ||||| |||||||||||||||||  ||||||| ||||||||||| ||| | 
Sbjct: 49475 ggaacactatatgaaagagaagtcaacagactactggacagtttgggccctcgatttatc 49416

                                                                         
Query: 1660  gattggtggtggaacacgccattgcctgtggatgctgatctccttccagaagttgttcca 1719
             ||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| || 
Sbjct: 49415 gattggtggtggaacacaccattgcctgttgatgctgatctccttcctgaggttgtccct 49356

                                                                         
Query: 1720  ggattcaaaactccatttagacagtgccctcctggtgtgagaccaacactagcagatgag 1779
             |  ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 49355 gacttcaagactccatttagacaatgccctcctggtgtgagaccagcactagcagatgag 49296

                                                                         
Query: 1780  gagctgacatacctgcgcaagcttgcacgtcctttgccaacacattttgctctaggtgat 1839
             |||||||| |||||||| |||| |||||| |||||||||||||||||||  |||||||| 
Sbjct: 49295 gagctgacctacctgcggaagcatgcacggcctttgccaacacattttgtcctaggtgag 49236

                       
Query: 1840  tatgctatta 1849
             | ||||||||
Sbjct: 49235 tttgctatta 49226



 Score = 56.0 bits (28), Expect = 8e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                         
Query: 1331  agataaaatcaggaggtctagttgtttggacaaaaggagacgttcattttgtttacagat 1390
             |||| ||| |||||||  ||||||||||||||| ||| | | | |||||||| |||||| 
Sbjct: 49708 agattaaaacaggaggcttagttgtttggacaagagggggcatacattttgtgtacagag 49649

                                 
Query: 1391  gaagtagttatctagaaaac 1410
             |||| ||||| |||||||||
Sbjct: 49648 gaagcagttacctagaaaac 49629



 Score = 50.1 bits (25), Expect = 0.047
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 1288  gagccgctccggcagtgcatggacagagcaagggagatacttgag 1332
             |||||||||||||  ||||||||| | ||||||||||| ||||||
Sbjct: 50293 gagccgctccggcgatgcatggaccgggcaagggagattcttgag 50249
to top
>ref|NM_001068170.1| Oryza sativa (japonica cultivar-group) Os08g0360100 (Os08g0360100)
            mRNA, complete cds
          Length = 2452

 Score =  264 bits (133), Expect = 2e-66
 Identities = 205/229 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1600 ggaacagtctatgagagagaagtcaacagactgttggacagcttgggccctcggtttgta 1659
            |||||| | ||||| |||||||||||||||||  ||||||| ||||||||||| ||| | 
Sbjct: 939  ggaacactatatgaaagagaagtcaacagactactggacagtttgggccctcgatttatc 998

                                                                        
Query: 1660 gattggtggtggaacacgccattgcctgtggatgctgatctccttccagaagttgttcca 1719
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| || 
Sbjct: 999  gattggtggtggaacacaccattgcctgttgatgctgatctccttcctgaggttgtccct 1058

                                                                        
Query: 1720 ggattcaaaactccatttagacagtgccctcctggtgtgagaccaacactagcagatgag 1779
            |  ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 1059 gacttcaagactccatttagacaatgccctcctggtgtgagaccagcactagcagatgag 1118

                                                             
Query: 1780 gagctgacatacctgcgcaagcttgcacgtcctttgccaacacattttg 1828
            |||||||| |||||||| |||| |||||| |||||||||||||||||||
Sbjct: 1119 gagctgacctacctgcggaagcatgcacggcctttgccaacacattttg 1167



 Score =  101 bits (51), Expect = 1e-17
 Identities = 105/123 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1288 gagccgctccggcagtgcatggacagagcaagggagatacttgagataaaatcaggaggt 1347
            |||||||||||||  ||||||||| | ||||||||||| |||||||| ||| ||||||| 
Sbjct: 663  gagccgctccggcgatgcatggaccgggcaagggagattcttgagattaaaacaggaggc 722

                                                                        
Query: 1348 ctagttgtttggacaaaaggagacgttcattttgtttacagatgaagtagttatctagaa 1407
             ||||||||||||||| ||| | | | |||||||| |||||| |||| ||||| ||||||
Sbjct: 723  ttagttgtttggacaagagggggcatacattttgtgtacagaggaagcagttacctagaa 782

               
Query: 1408 aac 1410
            |||
Sbjct: 783  aac 785
to top
>dbj|AK066365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063B12, full
            insert sequence
          Length = 2453

 Score =  264 bits (133), Expect = 2e-66
 Identities = 205/229 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1600 ggaacagtctatgagagagaagtcaacagactgttggacagcttgggccctcggtttgta 1659
            |||||| | ||||| |||||||||||||||||  ||||||| ||||||||||| ||| | 
Sbjct: 940  ggaacactatatgaaagagaagtcaacagactactggacagtttgggccctcgatttatc 999

                                                                        
Query: 1660 gattggtggtggaacacgccattgcctgtggatgctgatctccttccagaagttgttcca 1719
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| || 
Sbjct: 1000 gattggtggtggaacacaccattgcctgttgatgctgatctccttcctgaggttgtccct 1059

                                                                        
Query: 1720 ggattcaaaactccatttagacagtgccctcctggtgtgagaccaacactagcagatgag 1779
            |  ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 1060 gacttcaagactccatttagacaatgccctcctggtgtgagaccagcactagcagatgag 1119

                                                             
Query: 1780 gagctgacatacctgcgcaagcttgcacgtcctttgccaacacattttg 1828
            |||||||| |||||||| |||| |||||| |||||||||||||||||||
Sbjct: 1120 gagctgacctacctgcggaagcatgcacggcctttgccaacacattttg 1168



 Score =  101 bits (51), Expect = 1e-17
 Identities = 105/123 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1288 gagccgctccggcagtgcatggacagagcaagggagatacttgagataaaatcaggaggt 1347
            |||||||||||||  ||||||||| | ||||||||||| |||||||| ||| ||||||| 
Sbjct: 664  gagccgctccggcgatgcatggaccgggcaagggagattcttgagattaaaacaggaggc 723

                                                                        
Query: 1348 ctagttgtttggacaaaaggagacgttcattttgtttacagatgaagtagttatctagaa 1407
             ||||||||||||||| ||| | | | |||||||| |||||| |||| ||||| ||||||
Sbjct: 724  ttagttgtttggacaagagggggcatacattttgtgtacagaggaagcagttacctagaa 783

               
Query: 1408 aac 1410
            |||
Sbjct: 784  aac 786
to top
>gb|AF290415.1|AF290415 Zea mays 1L CRS1 (crs1) mRNA, partial cds; nuclear gene for
            chloroplast product
          Length = 1842

 Score =  260 bits (131), Expect = 3e-65
 Identities = 218/247 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1583 atgaagaacctgtcgaaggaacagtctatgagagagaagtcaacagactgttggacagct 1642
            |||||||||||||| | || ||| | ||||||||||||||||| ||||| |||||||  |
Sbjct: 271  atgaagaacctgtcaagggtacactatatgagagagaagtcaatagactattggacactt 330

                                                                        
Query: 1643 tgggccctcggtttgtagattggtggtggaacacgccattgcctgtggatgctgatctcc 1702
            |||||||||| ||||| |||||||||||| |||| ||||| ||||| |||||||||||||
Sbjct: 331  tgggccctcgatttgttgattggtggtgggacacaccattacctgttgatgctgatctcc 390

                                                                        
Query: 1703 ttccagaagttgttccaggattcaaaactccatttagacagtgccctcctggtgtgagac 1762
            | |||||  |||||||||| || || ||||||| ||| | |||||||||||| |||||||
Sbjct: 391  tcccagagtttgttccaggctttaagactccatataggctgtgccctcctggggtgagac 450

                                                                        
Query: 1763 caacactagcagatgaggagctgacatacctgcgcaagcttgcacgtcctttgccaacac 1822
            |||||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||
Sbjct: 451  caacactagctgatgaggagctgacatacttgcgcaagcttgcacgccttttgccaacac 510

                   
Query: 1823 attttgc 1829
            |||||||
Sbjct: 511  attttgc 517



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1318 agggagatacttgagataaaatcaggaggtctagttgtttggacaaaaggagacgttcat 1377
            ||||| || |||||||| ||| |||||||  ||||||| ||||||||||||||| | |||
Sbjct: 93   agggaaattcttgagattaaaacaggaggcttagttgtgtggacaaaaggagacatgcat 152

                             
Query: 1378 tttgtttacagatgaag 1394
            ||||| |||||| ||||
Sbjct: 153  tttgtctacagaggaag 169
to top
>gb|AF290414.1|AF290414 Zea mays 1L CRS1 (crs1) mRNA, complete cds; nuclear gene for
            chloroplast product
          Length = 2349

 Score =  252 bits (127), Expect = 6e-63
 Identities = 217/247 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1583 atgaagaacctgtcgaaggaacagtctatgagagagaagtcaacagactgttggacagct 1642
            |||||||||||||| | || ||| | ||||||||||||||||| ||||| |||||||  |
Sbjct: 877  atgaagaacctgtcaagggtacactatatgagagagaagtcaatagactattggacactt 936

                                                                        
Query: 1643 tgggccctcggtttgtagattggtggtggaacacgccattgcctgtggatgctgatctcc 1702
            |||||||||| ||||| |||||||||||| |||| ||||| ||||| |||||||||||||
Sbjct: 937  tgggccctcgatttgttgattggtggtgggacacaccattacctgttgatgctgatctcc 996

                                                                        
Query: 1703 ttccagaagttgttccaggattcaaaactccatttagacagtgccctcctggtgtgagac 1762
            | |||||  |||||||||| |  || ||||||| ||| | |||||||||||| |||||||
Sbjct: 997  tcccagagtttgttccaggctctaagactccatataggctgtgccctcctggggtgagac 1056

                                                                        
Query: 1763 caacactagcagatgaggagctgacatacctgcgcaagcttgcacgtcctttgccaacac 1822
            |||||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||
Sbjct: 1057 caacactagctgatgaggagctgacatacttgcgcaagcttgcacgccttttgccaacac 1116

                   
Query: 1823 attttgc 1829
            |||||||
Sbjct: 1117 attttgc 1123



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1318 agggagatacttgagataaaatcaggaggtctagttgtttggacaaaaggagacgttcat 1377
            ||||| || |||||||| ||| |||||||  ||||||| ||||||||||||||| | |||
Sbjct: 699  agggaaattcttgagattaaaacaggaggcttagttgtgtggacaaaaggagacatgcat 758

                             
Query: 1378 tttgtttacagatgaag 1394
            ||||| |||||| ||||
Sbjct: 759  tttgtctacagaggaag 775
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  236 bits (119), Expect = 4e-58
 Identities = 182/203 (89%)
 Strand = Plus / Minus

                                                                            
Query: 325      tttgtttccatgatggcgtagatcacaggagggcgtgggcagggcggagaggggcgagcg 384
                ||||||||||||| || ||||||||||||| |||||||| ||||| ||||| || |||||
Sbjct: 31077422 tttgtttccatgacggggtagatcacaggaaggcgtggggagggcagagagaggtgagcg 31077363

                                                                            
Query: 385      gcggaacgtgagggtgctcaaggccaactacatccaggagttctccgtcgtcggcaagta 444
                | |||||||| ||||||||||||| |||||||||| |||||||||||| || ||||||  
Sbjct: 31077362 gaggaacgtgcgggtgctcaaggcgaactacatccgggagttctccgttgtaggcaaggc 31077303

                                                                            
Query: 445      cgacgacccgctcgacccggctggctgtgtgctcgacctctccgccatccacgccaggga 504
                ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| ||||
Sbjct: 31077302 cgacgacccgctcgacccggccggctgcgtgctcgacctcgccgccatccacgcccggga 31077243

                                       
Query: 505      ggatgccgccctcaggtgcgtca 527
                ||| ||||| |||||||||||||
Sbjct: 31077242 ggaggccgctctcaggtgcgtca 31077220



 Score =  184 bits (93), Expect = 1e-42
 Identities = 132/145 (91%)
 Strand = Plus / Minus

                                                                            
Query: 104      cggcgccatggaggtcggcggcgaggagttcgcggtcggcgtggtgatctccgcgaagac 163
                ||||| ||||||||  |||||||||||||||||| |||| ||| ||||||||| ||||||
Sbjct: 31077656 cggcgacatggagggtggcggcgaggagttcgcgatcggggtgctgatctccgtgaagac 31077597

                                                                            
Query: 164      caccctcggggaggagttcgagggctagatcgtctccttcgaccgcccgagcaacctcct 223
                ||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||
Sbjct: 31077596 caccctcggcgaggagttcgaaggccagatcgtctccttcgaccgcccgaccaacctcct 31077537

                                         
Query: 224      cgtcatccatatccttcccaaatcc 248
                |||||| ||||||||| ||||||||
Sbjct: 31077536 cgtcattcatatcctttccaaatcc 31077512
to top
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0516G10
          Length = 148937

 Score =  236 bits (119), Expect = 4e-58
 Identities = 182/203 (89%)
 Strand = Plus / Minus

                                                                          
Query: 325    tttgtttccatgatggcgtagatcacaggagggcgtgggcagggcggagaggggcgagcg 384
              ||||||||||||| || ||||||||||||| |||||||| ||||| ||||| || |||||
Sbjct: 132378 tttgtttccatgacggggtagatcacaggaaggcgtggggagggcagagagaggtgagcg 132319

                                                                          
Query: 385    gcggaacgtgagggtgctcaaggccaactacatccaggagttctccgtcgtcggcaagta 444
              | |||||||| ||||||||||||| |||||||||| |||||||||||| || ||||||  
Sbjct: 132318 gaggaacgtgcgggtgctcaaggcgaactacatccgggagttctccgttgtaggcaaggc 132259

                                                                          
Query: 445    cgacgacccgctcgacccggctggctgtgtgctcgacctctccgccatccacgccaggga 504
              ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| ||||
Sbjct: 132258 cgacgacccgctcgacccggccggctgcgtgctcgacctcgccgccatccacgcccggga 132199

                                     
Query: 505    ggatgccgccctcaggtgcgtca 527
              ||| ||||| |||||||||||||
Sbjct: 132198 ggaggccgctctcaggtgcgtca 132176



 Score =  184 bits (93), Expect = 1e-42
 Identities = 132/145 (91%)
 Strand = Plus / Minus

                                                                          
Query: 104    cggcgccatggaggtcggcggcgaggagttcgcggtcggcgtggtgatctccgcgaagac 163
              ||||| ||||||||  |||||||||||||||||| |||| ||| ||||||||| ||||||
Sbjct: 132612 cggcgacatggagggtggcggcgaggagttcgcgatcggggtgctgatctccgtgaagac 132553

                                                                          
Query: 164    caccctcggggaggagttcgagggctagatcgtctccttcgaccgcccgagcaacctcct 223
              ||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||
Sbjct: 132552 caccctcggcgaggagttcgaaggccagatcgtctccttcgaccgcccgaccaacctcct 132493

                                       
Query: 224    cgtcatccatatccttcccaaatcc 248
              |||||| ||||||||| ||||||||
Sbjct: 132492 cgtcattcatatcctttccaaatcc 132468
to top
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585G03
          Length = 173649

 Score =  236 bits (119), Expect = 4e-58
 Identities = 182/203 (89%)
 Strand = Plus / Minus

                                                                         
Query: 325   tttgtttccatgatggcgtagatcacaggagggcgtgggcagggcggagaggggcgagcg 384
             ||||||||||||| || ||||||||||||| |||||||| ||||| ||||| || |||||
Sbjct: 66646 tttgtttccatgacggggtagatcacaggaaggcgtggggagggcagagagaggtgagcg 66587

                                                                         
Query: 385   gcggaacgtgagggtgctcaaggccaactacatccaggagttctccgtcgtcggcaagta 444
             | |||||||| ||||||||||||| |||||||||| |||||||||||| || ||||||  
Sbjct: 66586 gaggaacgtgcgggtgctcaaggcgaactacatccgggagttctccgttgtaggcaaggc 66527

                                                                         
Query: 445   cgacgacccgctcgacccggctggctgtgtgctcgacctctccgccatccacgccaggga 504
             ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| ||||
Sbjct: 66526 cgacgacccgctcgacccggccggctgcgtgctcgacctcgccgccatccacgcccggga 66467

                                    
Query: 505   ggatgccgccctcaggtgcgtca 527
             ||| ||||| |||||||||||||
Sbjct: 66466 ggaggccgctctcaggtgcgtca 66444



 Score =  184 bits (93), Expect = 1e-42
 Identities = 132/145 (91%)
 Strand = Plus / Minus

                                                                         
Query: 104   cggcgccatggaggtcggcggcgaggagttcgcggtcggcgtggtgatctccgcgaagac 163
             ||||| ||||||||  |||||||||||||||||| |||| ||| ||||||||| ||||||
Sbjct: 66880 cggcgacatggagggtggcggcgaggagttcgcgatcggggtgctgatctccgtgaagac 66821

                                                                         
Query: 164   caccctcggggaggagttcgagggctagatcgtctccttcgaccgcccgagcaacctcct 223
             ||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||
Sbjct: 66820 caccctcggcgaggagttcgaaggccagatcgtctccttcgaccgcccgaccaacctcct 66761

                                      
Query: 224   cgtcatccatatccttcccaaatcc 248
             |||||| ||||||||| ||||||||
Sbjct: 66760 cgtcattcatatcctttccaaatcc 66736
to top
>emb|CT829404.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN125H20, full
           insert sequence
          Length = 993

 Score =  186 bits (94), Expect = 3e-43
 Identities = 151/170 (88%)
 Strand = Plus / Plus

                                                                       
Query: 350 caggagggcgtgggcagggcggagaggggcgagcggcggaacgtgagggtgctcaaggcc 409
           ||||| |||||||| ||||| ||||| || |||||| |||||||| ||||||||||||| 
Sbjct: 211 caggaaggcgtggggagggcagagagaggtgagcggaggaacgtgcgggtgctcaaggcg 270

                                                                       
Query: 410 aactacatccaggagttctccgtcgtcggcaagtacgacgacccgctcgacccggctggc 469
           |||||||||| |||||||||||| || ||||||  ||||||||||||||||||||| |||
Sbjct: 271 aactacatccgggagttctccgtggtaggcaaggccgacgacccgctcgacccggccggc 330

                                                             
Query: 470 tgtgtgctcgacctctccgccatccacgccagggaggatgccgccctcag 519
           || |||||||||||| |||||||||||||| ||||||| ||||| |||||
Sbjct: 331 tgcgtgctcgacctcgccgccatccacgcccgggaggaggccgctctcag 380



 Score =  163 bits (82), Expect = 5e-36
 Identities = 115/126 (91%)
 Strand = Plus / Plus

                                                                       
Query: 104 cggcgccatggaggtcggcggcgaggagttcgcggtcggcgtggtgatctccgcgaagac 163
           ||||| ||||||||  |||||||||||||||||| |||| ||| ||||||||| ||||||
Sbjct: 84  cggcgacatggagggtggcggcgaggagttcgcgatcggggtgctgatctccgtgaagac 143

                                                                       
Query: 164 caccctcggggaggagttcgagggctagatcgtctccttcgaccgcccgagcaacctcct 223
           ||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||
Sbjct: 144 caccctcggcgaggagttcgaaggccagatcgtctccttcgaccgcccgaccaacctcct 203

                 
Query: 224 cgtcat 229
           ||||||
Sbjct: 204 cgtcat 209
to top
>ref|NM_001054620.1| Oryza sativa (japonica cultivar-group) Os02g0741900 (Os02g0741900)
           mRNA, complete cds
          Length = 908

 Score =  186 bits (94), Expect = 3e-43
 Identities = 151/170 (88%)
 Strand = Plus / Plus

                                                                       
Query: 350 caggagggcgtgggcagggcggagaggggcgagcggcggaacgtgagggtgctcaaggcc 409
           ||||| |||||||| ||||| ||||| || |||||| |||||||| ||||||||||||| 
Sbjct: 194 caggaaggcgtggggagggcagagagaggtgagcggaggaacgtgcgggtgctcaaggcg 253

                                                                       
Query: 410 aactacatccaggagttctccgtcgtcggcaagtacgacgacccgctcgacccggctggc 469
           |||||||||| |||||||||||| || ||||||  ||||||||||||||||||||| |||
Sbjct: 254 aactacatccgggagttctccgttgtaggcaaggccgacgacccgctcgacccggccggc 313

                                                             
Query: 470 tgtgtgctcgacctctccgccatccacgccagggaggatgccgccctcag 519
           || |||||||||||| |||||||||||||| ||||||| ||||| |||||
Sbjct: 314 tgcgtgctcgacctcgccgccatccacgcccgggaggaggccgctctcag 363



 Score =  163 bits (82), Expect = 5e-36
 Identities = 115/126 (91%)
 Strand = Plus / Plus

                                                                       
Query: 104 cggcgccatggaggtcggcggcgaggagttcgcggtcggcgtggtgatctccgcgaagac 163
           ||||| ||||||||  |||||||||||||||||| |||| ||| ||||||||| ||||||
Sbjct: 67  cggcgacatggagggtggcggcgaggagttcgcgatcggggtgctgatctccgtgaagac 126

                                                                       
Query: 164 caccctcggggaggagttcgagggctagatcgtctccttcgaccgcccgagcaacctcct 223
           ||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||
Sbjct: 127 caccctcggcgaggagttcgaaggccagatcgtctccttcgaccgcccgaccaacctcct 186

                 
Query: 224 cgtcat 229
           ||||||
Sbjct: 187 cgtcat 192
to top
>dbj|AK068461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153P08, full
           insert sequence
          Length = 909

 Score =  186 bits (94), Expect = 3e-43
 Identities = 151/170 (88%)
 Strand = Plus / Plus

                                                                       
Query: 350 caggagggcgtgggcagggcggagaggggcgagcggcggaacgtgagggtgctcaaggcc 409
           ||||| |||||||| ||||| ||||| || |||||| |||||||| ||||||||||||| 
Sbjct: 195 caggaaggcgtggggagggcagagagaggtgagcggaggaacgtgcgggtgctcaaggcg 254

                                                                       
Query: 410 aactacatccaggagttctccgtcgtcggcaagtacgacgacccgctcgacccggctggc 469
           |||||||||| |||||||||||| || ||||||  ||||||||||||||||||||| |||
Sbjct: 255 aactacatccgggagttctccgttgtaggcaaggccgacgacccgctcgacccggccggc 314

                                                             
Query: 470 tgtgtgctcgacctctccgccatccacgccagggaggatgccgccctcag 519
           || |||||||||||| |||||||||||||| ||||||| ||||| |||||
Sbjct: 315 tgcgtgctcgacctcgccgccatccacgcccgggaggaggccgctctcag 364



 Score =  163 bits (82), Expect = 5e-36
 Identities = 115/126 (91%)
 Strand = Plus / Plus

                                                                       
Query: 104 cggcgccatggaggtcggcggcgaggagttcgcggtcggcgtggtgatctccgcgaagac 163
           ||||| ||||||||  |||||||||||||||||| |||| ||| ||||||||| ||||||
Sbjct: 68  cggcgacatggagggtggcggcgaggagttcgcgatcggggtgctgatctccgtgaagac 127

                                                                       
Query: 164 caccctcggggaggagttcgagggctagatcgtctccttcgaccgcccgagcaacctcct 223
           ||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||
Sbjct: 128 caccctcggcgaggagttcgaaggccagatcgtctccttcgaccgcccgaccaacctcct 187

                 
Query: 224 cgtcat 229
           ||||||
Sbjct: 188 cgtcat 193
to top
>gb|AY109620.1| Zea mays CL1179_1 mRNA sequence
          Length = 2349

 Score =  168 bits (85), Expect = 7e-38
 Identities = 139/157 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1673 acacgccattgcctgtggatgctgatctccttccagaagttgttccaggattcaaaactc 1732
            |||| ||||| ||||| |||||||||||||| |||||  |||||||||| |  || ||||
Sbjct: 967  acacaccattacctgttgatgctgatctcctcccagagtttgttccaggctctaagactc 1026

                                                                        
Query: 1733 catttagacagtgccctcctggtgtgagaccaacactagcagatgaggagctgacatacc 1792
            ||| ||| | |||||||||||| ||||||||||||||||| |||||||||||||||||| 
Sbjct: 1027 catataggctgtgccctcctggggtgagaccaacactagctgatgaggagctgacatact 1086

                                                 
Query: 1793 tgcgcaagcttgcacgtcctttgccaacacattttgc 1829
            |||||||||||||||| | ||||||||||||||||||
Sbjct: 1087 tgcgcaagcttgcacgccttttgccaacacattttgc 1123



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1318 agggagatacttgagataaaatcaggaggtctagttgtttggacaaaaggagacgttcat 1377
            ||||| || |||||||| ||| |||||||  ||||||| ||||||||||||||| | |||
Sbjct: 699  agggaaattcttgagattaaaacaggaggcttagttgtgtggacaaaaggagacatgcat 758

                             
Query: 1378 tttgtttacagatgaag 1394
            ||||| |||||| ||||
Sbjct: 759  tttgtctacagaggaag 775



 Score = 63.9 bits (32), Expect = 3e-06
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1583 atgaagaacctgtcgaaggaacagtctatgagagagaagtcaacagactgttggacagct 1642
            |||||||||||||| | || ||| | ||||||||||||||||| ||||| |||||||  |
Sbjct: 877  atgaagaacctgtcaagggtacactatatgagagagaagtcaatagactattggacactt 936

                    
Query: 1643 tgggccct 1650
            ||||||||
Sbjct: 937  tgggccct 944
to top
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10,
             complete sequence
          Length = 159672

 Score =  161 bits (81), Expect = 2e-35
 Identities = 117/129 (90%)
 Strand = Plus / Minus

                                                                         
Query: 2121  tgctacaaaaaatacagcagctaggaggcattgccattatgcatacattggtggcctgcc 2180
             |||| ||| ||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 18147 tgctgcaagaaataaagaagctaggaggcattgccattatgcatacattgatggcctgcc 18088

                                                                         
Query: 2181  tccatcaaactgaacctgagcaacgggttttggcggctaatcttctccttcaattggata 2240
             ||||||||||||||||||| ||  ||||||| || ||||||||||| || ||||||||||
Sbjct: 18087 tccatcaaactgaacctgaacacagggttttagcagctaatcttcttctccaattggata 18028

                      
Query: 2241  tgctggtat 2249
             |||||||||
Sbjct: 18027 tgctggtat 18019
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  161 bits (81), Expect = 2e-35
 Identities = 117/129 (90%)
 Strand = Plus / Minus

                                                                            
Query: 2121     tgctacaaaaaatacagcagctaggaggcattgccattatgcatacattggtggcctgcc 2180
                |||| ||| ||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 17220835 tgctgcaagaaataaagaagctaggaggcattgccattatgcatacattgatggcctgcc 17220776

                                                                            
Query: 2181     tccatcaaactgaacctgagcaacgggttttggcggctaatcttctccttcaattggata 2240
                ||||||||||||||||||| ||  ||||||| || ||||||||||| || ||||||||||
Sbjct: 17220775 tccatcaaactgaacctgaacacagggttttagcagctaatcttcttctccaattggata 17220716

                         
Query: 2241     tgctggtat 2249
                |||||||||
Sbjct: 17220715 tgctggtat 17220707



 Score = 44.1 bits (22), Expect = 2.9
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 83     cctcccacccaccgccgccgccggcgccat 112
              ||||| ||||||||||||||||| ||||||
Sbjct: 888635 cctccgacccaccgccgccgccgccgccat 888664
to top
>dbj|AK242867.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090075L20, full
            insert sequence
          Length = 3613

 Score =  155 bits (78), Expect = 1e-33
 Identities = 114/126 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2121 tgctacaaaaaatacagcagctaggaggcattgccattatgcatacattggtggcctgcc 2180
            |||| ||| ||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1563 tgctgcaagaaataaagaagctaggaggcattgccattatgcatacattgatggcctgcc 1622

                                                                        
Query: 2181 tccatcaaactgaacctgagcaacgggttttggcggctaatcttctccttcaattggata 2240
            ||||||||||||||||||| ||  ||||||| || ||||||||||| || ||||||||||
Sbjct: 1623 tccatcaaactgaacctgaacacagggttttagcagctaatcttcttctccaattggata 1682

                  
Query: 2241 tgctgg 2246
            ||||||
Sbjct: 1683 tgctgg 1688
to top
>ref|NM_001061855.1| Oryza sativa (japonica cultivar-group) Os05g0363500 (Os05g0363500)
            mRNA, complete cds
          Length = 3303

 Score =  155 bits (78), Expect = 1e-33
 Identities = 114/126 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2121 tgctacaaaaaatacagcagctaggaggcattgccattatgcatacattggtggcctgcc 2180
            |||| ||| ||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1643 tgctgcaagaaataaagaagctaggaggcattgccattatgcatacattgatggcctgcc 1702

                                                                        
Query: 2181 tccatcaaactgaacctgagcaacgggttttggcggctaatcttctccttcaattggata 2240
            ||||||||||||||||||| ||  ||||||| || ||||||||||| || ||||||||||
Sbjct: 1703 tccatcaaactgaacctgaacacagggttttagcagctaatcttcttctccaattggata 1762

                  
Query: 2241 tgctgg 2246
            ||||||
Sbjct: 1763 tgctgg 1768
to top
>gb|AY110484.1| Zea mays CL5021_1 mRNA sequence
          Length = 743

 Score =  139 bits (70), Expect = 7e-29
 Identities = 113/129 (87%)
 Strand = Plus / Plus

                                                                       
Query: 104 cggcgccatggaggtcggcggcgaggagttcgcggtcggcgtggtgatctccgcgaagac 163
           ||||| ||||||||  || ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 46  cggcggcatggaggctggtggcgaggagttcgcgatcggcgtggtgatctccgcgaagac 105

                                                                       
Query: 164 caccctcggggaggagttcgagggctagatcgtctccttcgaccgcccgagcaacctcct 223
           ||||||     |||||||||||||| |||||||| |||||||||||||   |||||||||
Sbjct: 106 caccctnnnnnaggagttcgagggccagatcgtcgccttcgaccgcccctccaacctcct 165

                    
Query: 224 cgtcatcca 232
           ||| |||||
Sbjct: 166 cgttatcca 174



 Score = 46.1 bits (23), Expect = 0.74
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 394 gagggtgctcaaggccaactacatccaggagttctccgt 432
           |||||| ||||| || |||||||||| ||||||||||||
Sbjct: 217 gagggtcctcaaagcgaactacatccgggagttctccgt 255
to top
>ref|XM_779534.2| PREDICTED: Strongylocentrotus purpuratus similar to calcium-response
            factor CaRF (LOC579416), partial mRNA
          Length = 2331

 Score = 52.0 bits (26), Expect = 0.012
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                              
Query: 401  ctcaaggccaactacatccaggagttctccgtcg 434
            ||||||| ||||||| ||||||||||||||||||
Sbjct: 1264 ctcaaggtcaactacttccaggagttctccgtcg 1297
to top
>ref|XM_001203653.1| PREDICTED: Strongylocentrotus purpuratus similar to calcium-response
            factor CaRF (LOC579416), partial mRNA
          Length = 2331

 Score = 52.0 bits (26), Expect = 0.012
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                              
Query: 401  ctcaaggccaactacatccaggagttctccgtcg 434
            ||||||| ||||||| ||||||||||||||||||
Sbjct: 1264 ctcaaggtcaactacttccaggagttctccgtcg 1297
to top
>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence
          Length = 2646969

 Score = 48.1 bits (24), Expect = 0.19
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 118    tcggcggcgaggagttcgcggtcg 141
              ||||||||||||||||||||||||
Sbjct: 246283 tcggcggcgaggagttcgcggtcg 246260
to top
>ref|NM_001067068.1| Oryza sativa (japonica cultivar-group) Os07g0660700 (Os07g0660700)
           mRNA, complete cds
          Length = 1455

 Score = 46.1 bits (23), Expect = 0.74
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 91  ccaccgccgccgccggcgccatggagg 117
           ||||||||||||||| |||||||||||
Sbjct: 78  ccaccgccgccgccgccgccatggagg 104
to top
>gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcomycin biosynthetic gene
             cluster, partial sequence
          Length = 85915

 Score = 46.1 bits (23), Expect = 0.74
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 354   agggcgtgggcagggcggagaggggcg 380
             ||||||||||||||||| |||||||||
Sbjct: 77284 agggcgtgggcagggcgaagaggggcg 77258
to top
>gb|AC111106.10| Mus musculus chromosome 3, clone RP23-193O12, complete sequence
          Length = 202749

 Score = 46.1 bits (23), Expect = 0.74
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 2303   tcttttcttttctttttgcaaca 2325
              |||||||||||||||||||||||
Sbjct: 200435 tcttttcttttctttttgcaaca 200457
to top
>gb|AC111141.7| Mus musculus chromosome 3, clone RP23-369G12, complete sequence
          Length = 241179

 Score = 46.1 bits (23), Expect = 0.74
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 2303  tcttttcttttctttttgcaaca 2325
             |||||||||||||||||||||||
Sbjct: 25936 tcttttcttttctttttgcaaca 25958
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.74
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 91       ccaccgccgccgccggcgccatggagg 117
                ||||||||||||||| |||||||||||
Sbjct: 27797295 ccaccgccgccgccgccgccatggagg 27797321
to top
>gb|AC139016.12| Homo sapiens 12 BAC RP11-411N4 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 28186

 Score = 46.1 bits (23), Expect = 0.74
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 2303 tcttttcttttctttttgcaaca 2325
            |||||||||||||||||||||||
Sbjct: 6780 tcttttcttttctttttgcaaca 6802
to top
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496C02
          Length = 148419

 Score = 46.1 bits (23), Expect = 0.74
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 91    ccaccgccgccgccggcgccatggagg 117
             ||||||||||||||| |||||||||||
Sbjct: 89674 ccaccgccgccgccgccgccatggagg 89700
to top
>dbj|AK119617.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-G09, full
           insert sequence
          Length = 1455

 Score = 46.1 bits (23), Expect = 0.74
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 91  ccaccgccgccgccggcgccatggagg 117
           ||||||||||||||| |||||||||||
Sbjct: 78  ccaccgccgccgccgccgccatggagg 104
to top
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome
          Length = 1197687

 Score = 46.1 bits (23), Expect = 0.74
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 2409   ttgagctaaaagaaaaacagggc 2431
              |||||||||||||||||||||||
Sbjct: 729301 ttgagctaaaagaaaaacagggc 729323
to top
>gb|EF013562.1| Cheliomyrmex cf. morosus CASENT0007006 long wavelength rhodopsin
           (LW Rh) gene, partial cds
          Length = 532

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 209 cccgagcaacctcctcgtcatc 230
           ||||||||||||||||||||||
Sbjct: 154 cccgagcaacctcctcgtcatc 175
to top
>ref|XM_793604.2| PREDICTED: Strongylocentrotus purpuratus similar to calcium-response
            factor CaRF (LOC594155), partial mRNA
          Length = 2610

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 401  ctcaaggccaactacatccaggagttctcc 430
            ||||||| ||||||| ||||||||||||||
Sbjct: 1549 ctcaaggtcaactacttccaggagttctcc 1578
to top
>ref|XM_001202990.1| PREDICTED: Strongylocentrotus purpuratus similar to calcium-response
            factor CaRF (LOC594155), partial mRNA
          Length = 2610

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 401  ctcaaggccaactacatccaggagttctcc 430
            ||||||| ||||||| ||||||||||||||
Sbjct: 1549 ctcaaggtcaactacttccaggagttctcc 1578
to top
>ref|NM_001071833.1| Oryza sativa (japonica cultivar-group) Os10g0548100 (Os10g0548100)
           mRNA, complete cds
          Length = 1141

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  ccaccgccgccgccggcgccat 112
           ||||||||||||||||||||||
Sbjct: 912 ccaccgccgccgccggcgccat 933
to top
>ref|NM_001061009.1| Oryza sativa (japonica cultivar-group) Os05g0117300 (Os05g0117300)
           mRNA, complete cds
          Length = 588

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 83  cctcccacccaccgccgccgccggcgccat 112
           ||||| ||||||||||||||||| ||||||
Sbjct: 389 cctccgacccaccgccgccgccgccgccat 418
to top
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 2130     aaatacagcagctaggaggcat 2151
                ||||||||||||||||||||||
Sbjct: 16958589 aaatacagcagctaggaggcat 16958568
to top
>emb|CT025691.7| Zebrafish DNA sequence from clone CH211-206I4 in linkage group 4,
             complete sequence
          Length = 68685

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2458  tataaaataaagaatgcattca 2479
             ||||||||||||||||||||||
Sbjct: 55313 tataaaataaagaatgcattca 55334
to top
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
             complete sequence
          Length = 164477

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 83    cctcccacccaccgccgccgccggcgccat 112
             ||||| ||||||||||||||||| ||||||
Sbjct: 93059 cctccgacccaccgccgccgccgccgccat 93088
to top
>gb|DQ195081.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat
             receptor-like kinase gene cluster, complete sequence;
             ternary complex factor MIP1-like gene, complete cds;
             putative membrane-associated protein and gag-pol
             precursor, pseudogenes, complete sequence; and unknown
             genes
          Length = 94077

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 85    tcccacccaccgccgccgccggcgccatggaggt 118
             |||| ||| |||||||||||| ||||||||||||
Sbjct: 20568 tcccgcccgccgccgccgccgccgccatggaggt 20535
to top
>gb|AY730046.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat
             receptor-like kinase genes, complete cds
          Length = 42445

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 85    tcccacccaccgccgccgccggcgccatggaggt 118
             |||| ||| |||||||||||| ||||||||||||
Sbjct: 20039 tcccgcccgccgccgccgccgccgccatggaggt 20006
to top
>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence
          Length = 234127

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 2296   ctgcaaatcttttcttttcttt 2317
              ||||||||||||||||||||||
Sbjct: 116086 ctgcaaatcttttcttttcttt 116065
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 118     tcggcggcgaggagttcgcggt 139
               ||||||||||||||||||||||
Sbjct: 2450336 tcggcggcgaggagttcgcggt 2450315
to top
>gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complete sequence
          Length = 235023

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2296  ctgcaaatcttttcttttcttt 2317
             ||||||||||||||||||||||
Sbjct: 51770 ctgcaaatcttttcttttcttt 51791
to top
>gb|AC131213.4| Homo sapiens 12 BAC RP13-544K12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 153999

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2567  tattaattttatgttaaatttt 2588
             ||||||||||||||||||||||
Sbjct: 93313 tattaattttatgttaaatttt 93292
to top
>gb|AC010070.8| Drosophila melanogaster 3L BAC RP98-18E21 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 171622

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2130  aaatacagcagctaggaggcat 2151
             ||||||||||||||||||||||
Sbjct: 89742 aaatacagcagctaggaggcat 89721
to top
>emb|CR974432.6| Pig DNA sequence from clone PigE-204L22 on chromosome 6, complete
             sequence
          Length = 159182

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2297  tgcaaatcttttcttttctttt 2318
             ||||||||||||||||||||||
Sbjct: 61389 tgcaaatcttttcttttctttt 61410
to top
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 449     gacccgctcgacccggctggct 470
               ||||||||||||||||||||||
Sbjct: 1780576 gacccgctcgacccggctggct 1780555
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 449    gacccgctcgacccggctggct 470
              ||||||||||||||||||||||
Sbjct: 334082 gacccgctcgacccggctggct 334061
to top
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete
              sequence
          Length = 158550

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 91     ccaccgccgccgccggcgccat 112
              ||||||||||||||||||||||
Sbjct: 138991 ccaccgccgccgccggcgccat 139012
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 91       ccaccgccgccgccggcgccat 112
                ||||||||||||||||||||||
Sbjct: 20925400 ccaccgccgccgccggcgccat 20925379
to top
>gb|AC034205.4| Homo sapiens chromosome 5 clone CTB-23I7, complete sequence
          Length = 159562

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2295  actgcaaatcttttcttttctttttg 2320
             |||||||||||||||||||| |||||
Sbjct: 87996 actgcaaatcttttcttttccttttg 87971
to top
>gb|AF311901.1|AF311901 Citrobacter rodentium strain DBS100 pathogenicity island LEE,
            complete sequence
          Length = 42001

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1866 cttgttattcattcttattggtggtt 1891
            |||| |||||||||||||||||||||
Sbjct: 5923 cttgctattcattcttattggtggtt 5948
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 119     cggcggcgaggagttcgcggtc 140
               ||||||||||||||||||||||
Sbjct: 3994098 cggcggcgaggagttcgcggtc 3994077
to top
>emb|BX296546.6| Zebrafish DNA sequence from clone CH211-234P1 in linkage group 4,
              complete sequence
          Length = 174235

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2458   tataaaataaagaatgcattca 2479
              ||||||||||||||||||||||
Sbjct: 136150 tataaaataaagaatgcattca 136171
to top
>dbj|AK107224.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D06, full
           insert sequence
          Length = 1141

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  ccaccgccgccgccggcgccat 112
           ||||||||||||||||||||||
Sbjct: 912 ccaccgccgccgccggcgccat 933
to top
>gb|AE005076.1| Halobacterium sp. NRC-1 section 107 of 170 of the complete genome
          Length = 12928

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 128  ggagttcgcggtcggcgtggtg 149
            ||||||||||||||||||||||
Sbjct: 5378 ggagttcgcggtcggcgtggtg 5399
to top
>gb|AF113135.1|AF113135 Sus scrofa putative G-protein gene sequence
          Length = 800

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 254 ttgctccccgcccccgtctcca 275
           ||||||||||||||||||||||
Sbjct: 380 ttgctccccgcccccgtctcca 359
to top
>gb|M30950.1|CHPRGITX Chimpanzee 28S ribosomal RNA gene fragment
          Length = 2512

 Score = 44.1 bits (22), Expect = 2.9
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 80   cctcctcccacccaccgccgccgccg 105
            |||||||||||||||| |||||||||
Sbjct: 1849 cctcctcccacccaccaccgccgccg 1874


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 580,067,512
Number of extensions: 34434061
Number of successful extensions: 440286
Number of sequences better than 10.0: 58
Number of HSP's gapped: 440286
Number of HSP's successfully gapped: 76
Length of query: 3014
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2991
Effective length of database: 18,503,978,556
Effective search space: 55345399860996
Effective search space used: 55345399860996
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
to top