ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf22c18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK067782:Os06g0119900 | 45 | 5e-05 | 2 | AK107463:Os02g0666600 | 40 | 0.002 | 3 | Os07g0531500:Os07g0531500 | 38 | 0.011 | 4 | AK107339:Os05g0137000 | 34 | 0.12 | 5 | AK064715:Os06g0121300 | 33 | 0.21 | 6 | AK120903:Os03g0669300 | 32 | 0.80 | 7 | AK120399:Os03g0669300 | 32 | 0.80 | 8 | AK110709:Os01g0120900 | 30 | 2.3 | 9 | AK073946:Os12g0615800 | 30 | 2.3 | 10 | AK110885:Os06g0659600 | 30 | 3.0 | 11 | AK066930:Os06g0367100 | 30 | 3.1 | 12 | AK069442:Os03g0205000 | 29 | 4.0 | 13 | AK108621:Os02g0641900 | 29 | 4.0 | 14 | Os01g0780900:Os01g0780900 | 29 | 5.2 | 15 | Os12g0158900:Os12g0158900 | 28 | 6.8 | 16 | AK111996:Os04g0566500 | 28 | 6.8 | 17 | AK111587:Os04g0566500 | 28 | 6.8 | 18 | AK111504:Os04g0566500 | 28 | 6.8 | 19 | AK102911:Os04g0566500 | 28 | 6.8 | 20 | AK060129:Os10g0547200 | 28 | 6.8 | 21 | AK121820:Os04g0650700 | 28 | 6.8 | 22 | AK120767:Os09g0530200 | 28 | 6.8 | 23 | AK103941:Os01g0825500 | 28 | 6.8 | 24 | AK072321:Os01g0825500 | 28 | 6.8 | 25 | AK068693:Os04g0650700 | 28 | 6.8 | 26 | AK061502:Os04g0650700 | 28 | 6.8 | 27 | AK072965:Os01g0704400 | 28 | 8.9 |
|---|
>AK067782:Os06g0119900 | Length = 218 Score = 45.4 bits (106), Expect = 5e-05 Identities = 54/203 (26%), Positives = 68/203 (33%), Gaps = 9/203 (4%) Frame = +3 Query: 24 LSMATSTGKFTDGVWGPKHYILAAIGXXXXXXXXXXXXXXXXXPARIVFSVTATSTNQVQ 203 L +A+S+ W K YIL A+ P I FSVT S + Sbjct: 15 LQVASSSPNTHKSYWSTKQYILVAVVGTLAATVIVIGISALLSPGEIDFSVTKASRMILP 74 Query: 204 GAPVLILNFTVDAANPSGRAGVEYSSLTARLRVYS-------ARHRAAAWVQTVVHQAMP 362 + LN TV AANP RA VEY +L A+ V+T P Sbjct: 75 LDGGVELNLTVAAANPGWRAAVEYRGFDVKLHYTPFDGEPTLLNEDDASSVRT------P 128 Query: 363 LFQPXXXXXXXXXXXXXDQRFLVSSSGGIDGEDPSIRKNVSGGIKGDRAQRAP--PMAVL 536 QP +R VSG R P+ Sbjct: 129 FVQPPRNTTAI-----------------------PVRVFVSGDYWVQNMMRGNDIPITAQ 165 Query: 537 VRAQVRFKVGLAYSRPYDVEVSC 605 V A VRF +G A +R Y + VSC Sbjct: 166 VTATVRFLIGKACTRSYHIAVSC 188
>AK107463:Os02g0666600 | Length = 197 Score = 40.4 bits (93), Expect = 0.002 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +3 Query: 447 IDGEDPSIR----KNVSGGIKGDRAQRAPPMAVLVRAQVRFKVGLAYSRPYDVEVSCQPV 614 ID P++R + V +K DR+ P+ V ++ +VRF+ GL +R Y + SC PV Sbjct: 119 IDVAAPAVRAALPRGVEATVKKDRSDGKLPVDVHIKGKVRFRYGLVRTRRYKLRASCSPV 178
>Os07g0531500:Os07g0531500 | Length = 173 Score = 37.7 bits (86), Expect = 0.011 Identities = 32/144 (22%), Positives = 65/144 (45%) Frame = +3 Query: 177 TATSTNQVQGAPVLILNFTVDAANPSGRAGVEYSSLTARLRVYSARHRAAAWVQTVVHQA 356 T + N+ GA L + FTVD NP+ + G+ Y ++ + + ++ + Sbjct: 29 TIPNLNRQSGAVNLPVRFTVDERNPNQKIGIHYGTIF-----------GSVYYNDLLVAS 77 Query: 357 MPLFQPXXXXXXXXXXXXXDQRFLVSSSGGIDGEDPSIRKNVSGGIKGDRAQRAPPMAVL 536 P+ QP + +++SG G DP+ ++ GD A + + +L Sbjct: 78 GPVVQPFYQQPKGDTPLAGE----LTASGPTPG-DPAWQR-----FAGDAAAGSVALRLL 127 Query: 537 VRAQVRFKVGLAYSRPYDVEVSCQ 608 + + VRF+V + +R + ++V C+ Sbjct: 128 LNSTVRFQVQMWDTREHHMKVDCE 151
>AK107339:Os05g0137000 | Length = 201 Score = 34.3 bits (77), Expect = 0.12 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = -3 Query: 674 IDQSGSAADPRTGGRGGEEVDGLAGHL-----DVVRAGVGQPDLEPDLGPHQHGHGRR 516 + + G+ D R GGRG EVD L HL DV G + D QHGH R+ Sbjct: 21 VARRGALTDERRGGRGDGEVDELERHLGDARHDVAARGAAE---GVDEAAEQHGHERQ 75
>AK064715:Os06g0121300 | Length = 226 Score = 33.5 bits (75), Expect = 0.21 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +3 Query: 210 PVLILNFTVDAANPSGRAGVEYSSLTARLR 299 P + ++F + A NPSGRA +EY+ +T LR Sbjct: 70 PRVNMSFVLRAFNPSGRASIEYTGITVALR 99
>AK120903:Os03g0669300 | Length = 464 Score = 31.6 bits (70), Expect = 0.80 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = -3 Query: 680 GSIDQSGSAADPRTGGRGGEEVDGLAGHLDVVRAGVGQPDLEPDL 546 G SG AA P GG ++ G G V AG + DL+ DL Sbjct: 348 GLTSSSGGAASPSNGGASQQQPRGGGGGWCVASAGATEADLQADL 392
>AK120399:Os03g0669300 | Length = 464 Score = 31.6 bits (70), Expect = 0.80 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = -3 Query: 680 GSIDQSGSAADPRTGGRGGEEVDGLAGHLDVVRAGVGQPDLEPDL 546 G SG AA P GG ++ G G V AG + DL+ DL Sbjct: 348 GLTSSSGGAASPSNGGASQQQPRGGGGGWCVASAGATEADLQADL 392
>AK110709:Os01g0120900 | Length = 228 Score = 30.0 bits (66), Expect = 2.3 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = -3 Query: 647 PRTGGRGGEEVDGLAGHLDVVRAGVGQPDLEPDLGPHQHGHGRRPLGTVALD 492 PR GGRGG G GHL V GV +H HG++ +G L+ Sbjct: 115 PRRGGRGGGVEAGERGHLLVGEHGV------------EHVHGQQEVGAPRLE 154
>AK073946:Os12g0615800 | Length = 844 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = -1 Query: 487 PETFFRIEGSSPSMPPELLTKK--RWSKKADARK 392 P+ FF E P PP K+ RWSKKA A+K Sbjct: 232 PKPFFTKENLPPPPPPAPAKKEQQRWSKKAGAKK 265
>AK110885:Os06g0659600 | Length = 361 Score = 29.6 bits (65), Expect = 3.0 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -3 Query: 359 HGLVDHRLHPGGRPVSRAVHP*PGREGAVLHPRAAARVGGVD 234 HG VD RLHP RPV R H +GA + + R+ G D Sbjct: 244 HGRVDQRLHP-QRPVVRVHHVHARDDGAAVVEQPPHRLDGGD 284
>AK066930:Os06g0367100 | Length = 903 Score = 29.6 bits (65), Expect = 3.1 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +2 Query: 446 HRR*GPLNSKKCLRRHQGRPC---PAGASHGRAGEGPSP 553 HRR PL S+ LRR +G PC + +S GRAG P Sbjct: 21 HRR-RPLASRSGLRRREGCPCSCASSSSSSGRAGSQDRP 58
>AK069442:Os03g0205000 | Length = 927 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Frame = -3 Query: 659 SAADPRTGGRG--GEEVDGLAGHL---DVVRAGVGQPDLE 555 S+A P G G G E DG +L +VV AG+G PD + Sbjct: 66 SSASPSASGAGRVGGEADGFVAYLPHDEVVAAGLGGPDAQ 105
>AK108621:Os02g0641900 | Length = 375 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Frame = +2 Query: 497 GRPCPAGASHGRAGEGPSPVQGRAGLLPP--VRRRG 598 G P GASHG G+ +GR LPP +RRRG Sbjct: 168 GGGLPGGASHGAVGD--RAARGRGAPLPPLLLRRRG 201
>Os01g0780900:Os01g0780900 | Length = 347 Score = 28.9 bits (63), Expect = 5.2 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = -3 Query: 662 GSAADPRTGGRGGEE-VDGLAGHLDVVRAGVGQPD 561 G ADP GG GG + G G D VR G G D Sbjct: 64 GGGADPVRGGAGGSDAARGDGGGADPVRGGAGGSD 98
>Os12g0158900:Os12g0158900 | Length = 224 Score = 28.5 bits (62), Expect = 6.8 Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 5/120 (4%) Frame = +3 Query: 222 LNFTVDAANPSGRAGVEYSSLTARLRVY----SARHRAAAWVQTVVHQAMPLFQPXXXXX 389 L V NPSGRAGV Y ++ RL + ++ A A V V H QP Sbjct: 73 LAVNVTMYNPSGRAGVHYDAIRPRLLLLLAGGASLGAANATVPGVFH------QPRMSTT 126 Query: 390 XXXXXXXXDQRFLVSSSGGIDGE-DPSIRKNVSGGIKGDRAQRAPPMAVLVRAQVRFKVG 566 V+ +G + E D I+ + GG G +++ A+VR+K+G Sbjct: 127 VVAIDFDRSGGGGVAVAGDVAAELDKEIKGSGGGGEVG--------FEMVIDARVRYKLG 178
>AK111996:Os04g0566500 | Length = 749 Score = 28.5 bits (62), Expect = 6.8 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Frame = -3 Query: 647 PRTGGRGGEEVDGLAGHLD------VVRAGVGQPDLEPDLGPHQHGHGRRP 513 P+ GGRGG + G GH G G P+ + GP H G P Sbjct: 63 PQHGGRGGGQYQGRGGHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPGGGP 113
>AK111587:Os04g0566500 | Length = 1101 Score = 28.5 bits (62), Expect = 6.8 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Frame = -3 Query: 647 PRTGGRGGEEVDGLAGHLD------VVRAGVGQPDLEPDLGPHQHGHGRRP 513 P+ GGRGG + G GH G G P+ + GP H G P Sbjct: 46 PQHGGRGGGQYQGRGGHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPGGGP 96
>AK111504:Os04g0566500 | Length = 1101 Score = 28.5 bits (62), Expect = 6.8 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Frame = -3 Query: 647 PRTGGRGGEEVDGLAGHLD------VVRAGVGQPDLEPDLGPHQHGHGRRP 513 P+ GGRGG + G GH G G P+ + GP H G P Sbjct: 46 PQHGGRGGGQYQGRGGHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPGGGP 96
>AK102911:Os04g0566500 | Length = 919 Score = 28.5 bits (62), Expect = 6.8 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Frame = -3 Query: 647 PRTGGRGGEEVDGLAGHLD------VVRAGVGQPDLEPDLGPHQHGHGRRP 513 P+ GGRGG + G GH G G P+ + GP H G P Sbjct: 46 PQHGGRGGGQYQGRGGHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPGGGP 96
>AK060129:Os10g0547200 | Length = 242 Score = 28.5 bits (62), Expect = 6.8 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +3 Query: 480 VSGGIKGDRAQRAPPMAVLVRAQVRFKVGLAYSRPYDVEVSCQPVD 617 V+ ++ D A + V V VRF VG SR Y V V+C PV+ Sbjct: 176 VAWELEHDLAAGELSVDVEVTTGVRFIVGGVASRYYQVNVTCSPVN 221
>AK121820:Os04g0650700 | Length = 185 Score = 28.5 bits (62), Expect = 6.8 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%) Frame = +2 Query: 485 RRHQGRPCPAGASHG----RAGEGPSPVQGRAGL 574 RR +G P PAGA G RAG P+ +GRA L Sbjct: 33 RRRRGGPEPAGAQAGGGEARAGAVPAGGRGRAAL 66
>AK120767:Os09g0530200 | Length = 300 Score = 28.5 bits (62), Expect = 6.8 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = -1 Query: 472 RIEGSSPSMPPELLTKKRWSKKADARKLLELADGWKSGM---AWWTTVCTQAAALCLALY 302 R SS S P +R S + R+ A SG A WT CT A A A Sbjct: 21 RCSCSSSSSSPRSRILERGSFRRRRRRFRSSATSTSSGSSRTARWTP-CTAATAATGASC 79 Query: 301 TRSLAVRELYSTPARP 254 + + AVR +S P RP Sbjct: 80 SSAWAVRGRWSCPRRP 95
>AK103941:Os01g0825500 | Length = 540 Score = 28.5 bits (62), Expect = 6.8 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -1 Query: 418 WSKKADARKLLELADG--WKSGMAWWTTVCTQAAALCLALYTRS 293 + ++A AR L + ++ A W T C LC ALY RS Sbjct: 475 YQREAGARGTLTCSGAGCYRETFAIWGTTCAVGTLLCAALYARS 518
>AK072321:Os01g0825500 | Length = 540 Score = 28.5 bits (62), Expect = 6.8 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -1 Query: 418 WSKKADARKLLELADG--WKSGMAWWTTVCTQAAALCLALYTRS 293 + ++A AR L + ++ A W T C LC ALY RS Sbjct: 475 YQREAGARGTLTCSGAGCYRETFAIWGTTCAVGTLLCAALYARS 518
>AK068693:Os04g0650700 | Length = 162 Score = 28.5 bits (62), Expect = 6.8 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%) Frame = +2 Query: 485 RRHQGRPCPAGASHG----RAGEGPSPVQGRAGL 574 RR +G P PAGA G RAG P+ +GRA L Sbjct: 33 RRRRGGPEPAGAQAGGGEARAGAVPAGGRGRAAL 66
>AK061502:Os04g0650700 | Length = 159 Score = 28.5 bits (62), Expect = 6.8 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%) Frame = +2 Query: 485 RRHQGRPCPAGASHG----RAGEGPSPVQGRAGL 574 RR +G P PAGA G RAG P+ +GRA L Sbjct: 30 RRRRGGPEPAGAQAGGGEARAGAVPAGGRGRAAL 63
>AK072965:Os01g0704400 | Length = 301 Score = 28.1 bits (61), Expect = 8.9 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 77 LRAPHAISELPSAGRHGQ*KLSLPS 3 ++APHA S P AGR+G+ PS Sbjct: 136 IKAPHAWSSFPEAGRNGRSLAKAPS 160 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,320,322 Number of extensions: 560289 Number of successful extensions: 2330 Number of sequences better than 10.0: 27 Number of HSP's gapped: 2324 Number of HSP's successfully gapped: 29 Length of query: 303 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 203 Effective length of database: 11,395,755 Effective search space: 2313338265 Effective search space used: 2313338265 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
